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277 Commits

Author SHA1 Message Date
Allen Byrne
e42120c308 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit 'aeb145428f5e6bc51742fff031b0cf8cf6fbefbb':
  Updated h5trav.c to emit output that doesn't require ddl changes for map support.
  Fixed Map API CMake option
  Renamed H5Mdelete_key to H5Mdelete and H5Mset to H5Mput.
  Added ifdef for intel compilers, __GNUC__ has to be defined for header files which use it to work with intel compilers. This gives a warning for intel compiler about fallthrough, so added a check not to include fallthrough if using intel compilers.
  Added the map (H5M) API
 2019-08-13 13:15:55 -05:00
Allen Byrne
7b8ffecc20 HDFFV-10879 set default API version 2019-08-13 11:04:13 -05:00
Dana Robinson
dd2133f56e Fixed Map API CMake option 2019-08-13 08:53:09 -07:00
Dana Robinson
5b6bd7c922 Added the map (H5M) API 2019-08-13 01:36:42 -07:00
Allen Byrne
b28636464e HDFFV-10879 correct API version set command 2019-08-12 15:19:11 -05:00
Allen Byrne
d172582ca9 Use a STRING option for API version 2019-08-12 12:45:29 -05:00
Allen Byrne
2d6bb8b95c Fix API version option 2019-08-12 11:24:36 -05:00
Larry Knox
8008294578 Squashed commit of the following: 
Merge changes from update_merged_S3_HDFS branch into develop.

commit d5034315aea88629929ac0c9c59ebfafd5f21a31
Merge: 9c48823 d3fdcd8
Author: Larry Knox <lrknox@hdfgroup.org>
Date:   Thu Jul 25 08:24:53 2019 -0500

    Merge branch 'develop' into update_merged_S3_HDFS
 2019-07-25 11:47:12 -05:00
Allen Byrne
741ef0aaef HDFFV-10845 skip test if CMake command doesn't support ignore EOL 2019-07-17 11:58:05 -05:00
Allen Byrne
7ba562a820 HDFFV-10845 fix configure check and PATHs 2019-07-17 11:58:03 -05:00
Allen Byrne
e7f16c6f2c HDFFV-10805 Add option to only build shared targets 
HDFFV-10805 Add ONLY_SHARED_LIBS option and prefer shared over static
HDFFV-10803 Update FindSZIP.cmake find module
Remove unneeded modules and update java modules
 2019-06-18 07:46:25 -05:00
Allen Byrne
68bddef35d HDFFV-10741 - remove SKIP_ERRSTK_TESTS option 2019-04-15 14:46:23 -05:00
Dana Robinson
9ee3d47211 Renamed the HDF5_TEST_VOL option to HDF5_TEST_PASSTHROUGH_VOL. 2019-04-11 11:27:12 -07:00
Allen Byrne
8a09caf90a Add namespace option to dependencies 2019-04-02 12:30:16 -05:00
Allen Byrne
6e2e461087 HDFFV-10741 - add option to skip tool error stack tests 2019-03-26 14:00:34 -05:00
Jerome Soumagne
bcf5c400c0 Fix CMake H5_HAVE_THREADSAFE to set value in H5pubconf.h 
Add REQUIRED to find_package(Threads)

Link against thread library if static and not WIN32 platform
 2019-02-21 16:39:37 -06:00
Allen Byrne
122b63a5a2 HDFFV-10703 Update CMake commands to latest standard 2019-02-15 15:48:24 -06:00
Allen Byrne
36e3d1600a Refactor out timeout values 2019-02-06 16:41:58 -06:00
Allen Byrne
5ba4266a04 Correct name of variable 2019-02-06 11:02:16 -06:00
Allen Byrne
e73197077b Remove F2003 Option and references 2019-02-06 10:10:46 -06:00
Dana Robinson
055208b71c Minor tweak to CMake preadwrite entry. 2019-02-01 13:23:54 -08:00
Dana Robinson
f833001e39 Updated sec2, log, and core VFDs to use pread/pwrite when 
available (can be controlled via a configure/CMake option)
 2019-01-30 17:32:40 -08:00
Allen Byrne
909fa39bc7 Update option text 2018-12-21 11:41:02 -06:00
Allen Byrne
7e8923957f HDFFV-10656 Add CHECK_VOL support to CMake 2018-12-20 15:11:27 -06:00
Allen Byrne
494d39f1c2 Move options to root cmake file 2018-10-19 13:34:31 -05:00
Allen Byrne
8d7bdb7041 CMake changes for SKIPPED and flush tests 2018-09-24 14:38:46 -05:00
Allen Byrne
05c5d40dd5 Cleanup and add intermediate dir for java 2018-08-31 13:29:36 -05:00
Allen Byrne
ae7da889ec HDFFV-10552 Add missing HDF5_USE_110[2]_API_DEFAULT option 2018-08-17 14:48:43 -05:00
Allen Byrne
01c9aa1e76 Update Drop Site options and Coverage settings 2018-08-09 10:59:32 -05:00
Allen Byrne
b4571f6190 Typo fix 2018-08-02 10:38:54 -05:00
Allen Byrne
2c17b19861 Set CMAKE_REQUIRED_INCLUDES instead of using path in call 2018-08-02 10:22:37 -05:00
Jordan Henderson
70de0b18e3 Merge pull request #1167 in HDFFV/hdf5 from ~JHENDERSON/hdf5:bugfix/MPI2_only_fixes to develop 
* commit '9aa2eaeb9ed9c94f63973cb55f13de256558497c':
  Add Autotools and CMake checks for big I/O MPI-3 functions
  Add hdf5settings section for parallel compression status in CMake builds
  Switch to CheckSymbolExists in CMake
  Add configure check for MPI_Mprobe and MPI_Imrecv functions
 2018-08-02 09:25:00 -05:00
Jordan Henderson
9aa2eaeb9e Add Autotools and CMake checks for big I/O MPI-3 functions 2018-07-31 13:42:19 -05:00
Jordan Henderson
5e138dc1e9 Add hdf5settings section for parallel compression status in CMake builds 2018-07-31 10:45:43 -05:00
Allen Byrne
b33ba00c9c HDFFV-9755 Document BUILD_STATIC_EXECS 2018-07-30 12:39:38 -05:00
Jordan Henderson
256fc4754b Switch to CheckSymbolExists in CMake 2018-07-27 12:49:42 -05:00
Jordan Henderson
e1e10743cf Add configure check for MPI_Mprobe and MPI_Imrecv functions 
Add line to libhdf5settings file for status of Parallel writes to
filtered datasets status

Surround Parallel Compression code in MPI_VERSION >= 3 checks

Add disabled message for Parallel Compression built w/ MPI-2

Modify Parallel Compression tests to only run the parallel filtered read
tests when parallel filtered writes are disabled

Update big I/O code to handle being built with MPI-2

Add checks to CMakeLists.txt for MPI_Mprobe and MPI_Imrecv
 2018-07-26 12:50:26 -05:00
Allen Byrne
792771d52a Update Java util lib, Refactor H5D write VL to match read 2018-06-27 17:53:47 -05:00
Allen Byrne
2347bffaa2 TRILABS-19 remove add_defintions and use generator expressions 2018-04-26 16:41:04 -05:00
Allen Byrne
bc9a773b99 TRILABS-20 Fix fortran configure during fix of CXX configure 2018-04-24 17:22:55 -05:00
Allen Byrne
6c82c49dd5 TRILABS-20 set a compiler name on all project commands 2018-04-20 10:11:55 -05:00
Allen Byrne
46f2a2a432 TRILABS-19 Initial conversion of include_directories to targets 2018-04-17 15:57:58 -05:00
Allen Byrne
db3d744f25 HDFFV-10444 fix soversion numbers for libraries 2018-04-10 08:55:17 -05:00
Allen Byrne
2d0a0859b2 Remove obsolete comments 2018-03-09 12:45:22 -06:00
Allen Byrne
24c62ba7fe Change CMake min to 3.10 2018-03-09 12:32:06 -06:00
Allen Byrne
b36bad53d9 Inc CMake min, Add new tests, rework test CMake files 2018-02-27 12:57:07 -06:00
Allen Byrne
fbaa2192f8 Remove old dependency construct 2018-02-05 16:14:00 -06:00
Allen Byrne
435fd5afa5 HDFFV-10398 add support for Emscriptem build system 2018-01-30 16:03:03 -06:00
Allen Byrne
2f18da435e HDFFV-10398 use the simpler add_subdirectory signature 2018-01-30 12:21:01 -06:00
Allen Byrne
468fbc36f1 Fix windows compile errors abstract out common settings 2018-01-29 10:27:32 -06:00