Commit Graph

10153 Commits

Author SHA1 Message Date
Pedro Vicente Nunes
b2b63b3c75 [svn-r14173]
bug fix

the binary option expects a full path in -o
TOOLTEST   tbin1.ddl -d integer -o $TESTDIR/out1.bin -b LE    tbinary.h5

and it prints it in the expected output , making it absolutely not portable

Solution: made a special macro function TOOLTEST1 identical to TOOLTEST  except that it does not print the Expected output header

#############################
Expected output for 'h5dump -d integer -o /home/pvn/kagiso/build_hdf5/tools/h5dump/../testfiles/out1.bin -b LE tbinary.h5'
#############################



Tested : linux
2007-10-02 13:34:30 -05:00
Pedro Vicente Nunes
d0bcb06e7a [svn-r14172]
1)	added 5 new tests for the group creation order
2)	modified the h5dump test script to automatically generated non existing (new) output files
3)	cleaning of unused DDL files
4)	new modified DDL files include tcomp-3.ddl ( new form of named datatype) and the binary output files

tested : linux
2007-10-02 11:45:46 -05:00
Pedro Vicente Nunes
12c7f7b6da [svn-r14171]
bug fix: the new option --sort_by clashes with the existing abreviated form of soft-link "so"

solution: eliminate the form "so"

tested: windows, linux
2007-10-02 10:46:25 -05:00
Quincey Koziol
cba7dd0ddd [svn-r14170] Description:
Avoid memory leak when realloc() fails during attempt to get larger 
buffer as we are decompressing deflated data.

Tested on:
        FreeBSD/32 6.2 (duty)
        Linux/32 2.6 (kagiso)
2007-10-02 09:55:35 -05:00
Pedro Vicente Nunes
5c081f2baa [svn-r14168] bug fix:
groups and creation order:
if there is a request to do H5_INDEX_CRT_ORDER and this flag is set
in the group, then, sort by creation order, otherwise by name

tested: windows, linux
2007-10-02 09:54:38 -05:00
Pedro Vicente Nunes
c36d2e6e25 [svn-r14167]
Added 2 new switch flags for sort parameters of groups.

-q   sort_by [creation_order | name] 
-z    sort_order [ascending | descending ] 

Added extra parameter to dump_group of type H5_iter_order_t to control the iteration order, to be passed to H5Literate.

Note : code under development, tests not added yet and flags NOT added to usage 
Tested : windows, linux
2007-10-01 15:54:01 -05:00
Scott Wegner
1d80caa692 [svn-r14166] Purpose: Update Windows command-line build scripts
Description:
This updates the command-line build process to handle structural changes we've made in the HDF5 project files.  Also, we add support for two new options:
/fort   - to build Fortran libraries
/useenv - to allow users to specify include and libpath directories on the command line as well.

Also updated documentation to reflect these change.

Tested:
VS2005 on WinXP
2007-10-01 11:08:11 -05:00
Pedro Vicente Nunes
48eb736b68 [svn-r14165]
new file for h5dump
2007-10-01 09:52:55 -05:00
Pedro Vicente Nunes
1bafc18730 [svn-r14164]
first batch for displaying groups in creation order

1) Added extra parameter to dump_group of type H5_index_t , to be passed to H5Literate.

When a group is tried to be displayed, an inquiry of its creation properties is made. If H5P_CRT_ORDER_TRACKED is present on the group property list then the display is made by creation order, otherwise it is made by name

2) Added a new file to h5dumpgentest that generates a file with a hierarchy of groups with creation order on and off in alternately  


Note : XML code was not modified

Tested : windows, linux
2007-10-01 09:49:23 -05:00
Quincey Koziol
5b1a07823f [svn-r14163] Description:
Make H5Arename() versioned and switch internal usage to use H5Arename2()

	Add regression test for H5Arename1()


Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        AIX/32 5.3 (copper) w/FORTRAN, w/parallel, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-09-27 18:09:59 -05:00
Quincey Koziol
c63f9b42ec [svn-r14162] Description:
Make H5Adelete versioned and switch internal library use to H5Adelete2.

	Add regression test for H5Adelete1

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        AIX/32 5.3 (copper) w/FORTRAN, w/parallel, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-09-27 17:42:20 -05:00
Quincey Koziol
a9a10b0a05 [svn-r14161] Description:
Add forgotten ifdef's around deprecated routines.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        AIX/32 5.3 (copper) w/FORTRAN, w/parallel, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-09-27 16:09:17 -05:00
Quincey Koziol
2c93a80648 [svn-r14160] Description:
Make H5Topen versioned, and add regression test for H5Topen1.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        AIX/32 5.3 (copper) w/FORTRAN, w/parallel, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-09-27 15:28:27 -05:00
Quincey Koziol
0ee1ca5c20 [svn-r14159] Description:
Clarify some text in comments.
2007-09-27 14:28:04 -05:00
Quincey Koziol
6dca2239bd [svn-r14158] Description:
Add regression test for h5repack with userblock

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        AIX/32 5.3 (copper) w/FORTRAN, w/parallel, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-09-27 10:18:21 -05:00
Quincey Koziol
8b5643ac36 [svn-r14157] Description:
Add regression test for deprecated routine: H5Tcommit1().

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        AIX/32 5.3 (copper) w/FORTRAN, w/parallel, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-09-27 07:11:59 -05:00
Quincey Koziol
3706d53f15 [svn-r14156] Description:
Add API versioning to H5Tcommit()

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        AIX/32 5.3 (copper) w/FORTRAN, w/parallel, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-09-25 21:50:31 -05:00
Peter Cao
8f84b136fc [svn-r14155] Copy user block when repack a file by defualt.
(need to add more options as stated in bug 173)
2007-09-25 17:55:21 -05:00
Quincey Koziol
68c01f91d9 [svn-r14154] Description:
Finish deprecating last H5G symbol (H5G_obj_t) - yay!

	Lots of misc. library fixes to remove confusion between links and
objects.  The tools could still use another pass, to remove h5trav_type_t type
and make the correct distinction between links & objects.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        AIX/32 5.3 (copper) w/FORTRAN, w/parallel, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-09-25 17:18:33 -05:00
Quincey Koziol
02296972ec [svn-r14153] Description:
Add regression test for H5Rget_obj_type1()

Tested on:
	FreeBSD/32 6.2 (duty)
	FreeBSD/64 6.2 (liberty)
	Linux/32 2.6 (kagiso)
	Linux/64 2.6 (smirom)
	Solaris/32 2.10 (linew)
	AIX/32 5.3 (copper)
	Mac OS X/32 10.4.10 (amazon)
2007-09-25 08:31:31 -05:00
Pedro Vicente Nunes
2a693df239 [svn-r14150]
bug fix: a CHECK macro had a wrong function name (H5Pget_link_creation_order)  in the description

tested: linux
2007-09-18 16:00:04 -05:00
Scott Wegner
1a332eb5a2 [svn-r14149] Purpose: Add new source files to Windows projects
Description:
Two new files, h5rdeprec.c and h5rpkg.h were added to the Windows HDF5 projects.

Tested:
VS2005, build only.
2007-09-17 09:18:20 -05:00
Quincey Koziol
94153c6c3d [svn-r14148] Description:
Add H5Rget_obj_type() to the API versioning and switch internal
routines to use H5Rget_obj_type2()

	Misc. other code cleanups, etc.

Tested on:
        FreeBSD/32 6.2 (duty)
        FreeBSD/64 6.2 (liberty)
        Linux/32 2.6 (kagiso)
        Linux/64 2.6 (smirom)
        AIX/32 5.3 (copper)
        Solaris/32 2.10 (linew)
        Mac OS X/32 10.4.10 (amazon)
2007-09-13 20:52:38 -05:00
Quincey Koziol
be12aa63a0 [svn-r14147] Description:
Clean up some "WANT_H5_V1_4_COMPAT" #ifdefs that somehow survived this
far...

Tested on:
	FreeBSD/32 6.2 (duty)
2007-09-13 13:32:01 -05:00
Quincey Koziol
27a1a10fbb [svn-r14146] Description:
Move H5Gget_objtype_by_idx() to deprecated symbols section, replacing
with H5Oget_info_by_idx()

Tested on:
        FreeBSD/32 6.2 (duty)
        FreeBSD/64 6.2 (liberty)
        Linux/32 2.6 (kagiso)
        Linux/64 2.6 (smirom)
        AIX/32 5.3 (copper)
        Solaris/32 2.10 (linew)
        Mac OS X/32 10.4.10 (amazon)
2007-09-13 13:26:12 -05:00
Quincey Koziol
095762a736 [svn-r14145] Description:
Move H5Gget_objname_by_idx() to deprecated symbols section.  Replace
internal usage with H5Lget_name_by_idx().

Tested on:
        FreeBSD/32 6.2 (duty)
        FreeBSD/64 6.2 (liberty)
        Linux/32 2.6 (kagiso)
        Linux/64 2.6 (smirom)
        AIX/32 5.3 (copper)
        Solaris/32 2.10 (linew)
        Mac OS X/32 10.4.10 (amazon)
2007-09-13 12:04:36 -05:00
Quincey Koziol
579284f422 [svn-r14144] Description:
Move H5Gget_objinfo() to deprecated symbols section and retarget
internal usage to H5Lget_info()/H5Oget_info().

	Misc. other code cleanups...

Tested on:
	FreeBSD/32 6.2 (duty)
	FreeBSD/64 6.2 (liberty)
	Linux/32 2.6 (kagiso)
	Linux/64 2.6 (smirom)
	AIX/32 5.3 (copper)
	Solaris/32 2.10 (linew)
	Mac OS X/32 10.4.10 (amazon)
2007-09-13 10:44:56 -05:00
Scott Wegner
15d118faed [svn-r14142] Purpose: Add files forgotten in yesterday's checkin
Description:
In my large checkin yesterday, I forgot to add a few Windows project files that were renamed.  This should bring the MANIFEST up to date.

Tested:
Will use chkmanifest after commit
2007-09-11 08:10:22 -05:00
Scott Wegner
df281766f2 [svn-r14141] Purpose: Update Windows testing documentation
Description:
There are minor changes in the testing process for Windows with the new test scripts.  Specifically, the test output is output to the screen, rather than redirected into files, by default.  Also, it is much easier to test parts modularly, and installing DLLs is one step, instead of separated batch files.

Tested:
None, only documentation changed.
2007-09-10 16:10:20 -05:00
Scott Wegner
d2818a17e8 [svn-r14140] Purpose: Fix typo from last checkin
Description:
There was a minor typo in the Windows test script for h5copy.  It was actually causing us to do extra work, so this checkin should make the test slightly more efficient, without breaking anything.

Tested:
VS2005 on WinXP
2007-09-10 16:01:49 -05:00
Quincey Koziol
1ce44ed19c [svn-r14139] Description:
Minor edits to clean up code.

Tested on:
    FreeBSD/32 6.2 (duty)
2007-09-10 14:59:38 -05:00
Scott Wegner
43bb1ba8e5 [svn-r14138] 2007-09-10 14:14:08 -05:00
Quincey Koziol
33efca34cb [svn-r14137] Description:
Correct name used for checking objects to operate on for h5repack,
exposed by recent traversal routine changes.

Tested on:
	Solaris/32 5.10 (linew) w/szip
2007-09-07 14:08:07 -05:00
Quincey Koziol
3bed870363 [svn-r14136] Description:
Move H5Gget_num_objs() and several minor macros, etc. to deprecated
symbols section, replacing it with H5Gget_info().

Tested on:
	FreeBSD/32 6.2 (duty)
	FreeBSD/64 6.2 (liberty)
	Linux/32 2.6 (kagiso)
	Linux/64 2.6 (smirom)
	AIX/32 5.3 (copper)
	Solaris/32 5.10 (linew)
	Mac OS X/32 10.4.10 (amazon)
2007-09-06 10:54:22 -05:00
Quincey Koziol
3eb8c81b80 [svn-r14134] Description:
Cast usage of hsize_t variable as array index into size_t.

Tested on:
	Linux/32 2.6 (kagiso) w/PGU compilers
2007-08-31 14:55:43 -05:00
Quincey Koziol
e4f358746f [svn-r14133] Description:
Fix naming change for FORTRAN symbol: H5G_LINK_ERROR -> H5L_TYPE_ERROR

Tested on:
	Solaris/32 5.10 (linew)
2007-08-31 14:53:03 -05:00
Quincey Koziol
5c35e64c8a [svn-r14132] Description:
Regenerate the h5diff_types.h5 file, which had somehow gotten mangled
in some earlier checkin (prior to ~2-3 days ago, at least).

	Clean up formatting a bit also..

Tested on:
	Mac OS X/32 10.4.10 (amazon)
2007-08-30 15:34:13 -05:00
Quincey Koziol
a4069db8f4 [svn-r14131] Description:
Move H5Giterate() and H5G_iterate_t to deprecated symbols section,
replacing them with H5Literate and H5L_iterate_t respectively.

Tested on:
	FreeBSD/32 6.2 (duty)
	FreeBSD/64 6.2 (liberty)
	Linux/32 2.6 (kagiso)
	Linux/64 2.6 (smirom)
	AIX/32 5.3 (copper)
	Solaris/32 5.10 (linew)
	Mac OS X/32 10.4.10 (amazon)
2007-08-30 15:03:37 -05:00
Quincey Koziol
1374654210 [svn-r14130] Description:
Correct typo in FORTRAN wrapper for retrieving the comment for an object

Tested on:
	FreeBSD/64 6.2 (liberty)
2007-08-30 08:57:40 -05:00
Quincey Koziol
c50c23d387 [svn-r14129] Description:
Add H5O{set|get}_comment routines, which were overlooked before.

	Move H5G{set|get}_comment routines to deprecated code section,
replacing internal calls with H5O{set|get}_comment.

Tested on:
	FreeBSD/32 6.2 (duty)
	FreeBSD/64 6.2 (liberty)
	Linux/32 2.6 (kagiso)
	Linux/64 2.6 (smirom)
	Solaris/32 5.10 (linew)
	AIX/32 5.3 (copper)
	Mac OS X/32 10.4.10 (amazon)
2007-08-30 08:55:10 -05:00
Quincey Koziol
926a033b13 [svn-r14128] Description:
Correct typo in error returned from H5G_open_name() routine.

Tested on:
	FreeBSD/32 6.2 (duty)
2007-08-30 05:09:03 -05:00
Quincey Koziol
71d6bffdd7 [svn-r14127] Description:
Move H5Gget_linkval to deprecated symbol section and replace with
H5Lget_val for internal calls.

Tested on:
	FreeBSD/32 6.2 (duty)
	FreeBSD/64 6.2 (liberty)
	Linux/32 2.6 (kagiso)
	Linux/64 2.6 (smirom)
	Solaris/32 5.10 (linew)
	Mac OS X/32 10.4.10 (amazon)
2007-08-29 18:37:41 -05:00
Quincey Koziol
db3c155bf2 [svn-r14126] Description:
Move H5Gunlink to deprecated symbol section, replacing internal calls
with H5Ldelete.

Tested on:
	FreeBSD/32 6.2 (duty)
	FreeBSD/64 6.2 (liberty)
	Linux/32 2.6 (kagiso)
	Linux/64 2.6 (smirom)
	Solaris/32 5.10 (linew)
	Mac OS X/32 10.4.10 (amazon)
2007-08-29 15:44:19 -05:00
Quincey Koziol
a4c8e8fd56 [svn-r14125] Description:
Correct another typo in return value on error FAIL -> NULL

Tested on:
	FreeBSD/32 6.2 (duty)
2007-08-29 08:22:58 -05:00
Quincey Koziol
ea7b995476 [svn-r14124] Description:
Fix typo H5Gopenw -> H5Gopen2

Tested on:
	FreeBSD/32 6.2 (duty)
2007-08-29 08:19:57 -05:00
Quincey Koziol
bc07e61d29 [svn-r14123] Description:
Move H5Gmove2() to deprecated code section, replacing it with H5Lmove()
in the source code.

Tested on:
	FreeBSD/32 6.2 (duty)
	FreeBSD/64 6.2 (liberty)
	Linux/32 2.6 (kagiso)
	Linux/64 2.6 (smirom)
	Solaris/32 5.10 (linew)
	Mac OS X/32 10.4.10 (amazon)
2007-08-28 17:45:23 -05:00
Quincey Koziol
cae55b647d [svn-r14122] Description:
Move H5Gmove() to deprecated code section, replacing with H5Lmove()
in source files.

Tested on:
	FreeBSD/32 6.2 (duty)
	FreeBSD/64 6.2 (liberty)
	Linux/32 2.6 (kagiso)
	Linux/64 2.6 (smirom)
	Solaris/32 5.10 (linew)
	Mac OS X/32 10.4.10 (amazon)
2007-08-28 17:30:13 -05:00
Quincey Koziol
518e0ede77 [svn-r14121] Description:
Correct a couple of swapped parameters for creating soft links.

Tested on:
	FreeBSD/64 6.2 (liberty)
2007-08-28 16:49:12 -05:00
Quincey Koziol
74ceb182bd [svn-r14120] Description:
Move H5Glink2 to deprecated routines section.

Tested on:
	FreeBSD/32 6.2 (duty)
	FreeBSD/64 6.2 (liberty)
	Linux/32 2.6 (kagiso)
	Linux/64 2.6 (smirom)
	Solaris/32 5.10 (linew)
	Mac OS X/32 10.4.10 (amazon)
2007-08-28 16:31:57 -05:00
Quincey Koziol
1b488cbc14 [svn-r14119] Description:
Fix typo in FORTRAN wrapper for H5Glink.

Tested on:
	FreeBSD/64 6.2 (liberty) w/FORTRAN
2007-08-28 15:10:21 -05:00