Commit Graph

30 Commits

Author SHA1 Message Date
Allen Byrne
772276ea1f
Remove examples that have been moved to HDF5Examples folder (#3917) 2024-01-03 14:17:46 -06:00
Larry Knox
2ea165efd0
Update license url part2 (#333)
* Modify temporary rpath for testing in java example scripts.

* Update URL in source file Copyright headers for web copy of COPYING
    file - files not in src or test.
2021-02-17 08:52:36 -06:00
Quincey Koziol
e767f44e95 Merge remote-tracking branch 'origin/develop' into monotonic_timer 2020-06-26 18:57:38 -05:00
Quincey Koziol
9e5dbf6906 Trim trailing whitespace 2020-04-20 18:12:00 -05:00
David Young
f1b39ad80e Apparently, + has no special meaning, and neither does \+, in so-called
"obsolete" / POSIX "basic" regular expressions.  Also, not every version of
`sed` out there supports the `-E` option.  So delete the -E flag and use
the regex `[^/][^/]*` instead of `[^/]+`.

Add config/netbsd to the MANIFEST.
2019-11-12 10:43:26 -06:00
David Young
2dd5bbfe16 Merge pull request #1984 in HDFFV/hdf5 from ~DYOUNG/netbsd:develop to develop
* commit '0b721858e46a317c370a24115032d5be41688f67':
  Make these scripts relocatable again: derive a relative path for the original installation prefix from the examples prefix.  Use that relative path to locate the current installation prefix, always.  Fall back to an absolute installation prefix if the relative path cannot be derived.
  Get the path to prefix right: needs a ../ to back out of subdirectory c/.
  Make this script relocatable again: derive a relative path for the original installation prefix from the examples prefix.  Use that relative path to locate the current installation prefix, always.  Fall back to an absolute installation prefix if the relative path cannot be derived.
  Let us override the examples directory using --with-examplesdir=DIR. This is handy for NetBSD where HDF5 examples are installed by convention in $prefix/share/examples/hdf5/ rather than in ${prefix}/share/hdf5_examples/, which is the HDF5 default.
  Follow longstanding execv convention for compatibility with NetBSD.
  Under the examples directories, always find the installed HDF5 executables and scripts using @prefix@ instead of a relative path, because the number of ../ in the relative path will be different on NetBSD than on other systems.
  Make the HDF5 configure script grok NetBSD.
  For portability, insulate the HDF5 library from some system macros.
  Not every system has perl installed in /usr/bin/, so change the shebang (#!) line to `/usr/bin/env perl` to locate perl on the PATH.
  For portability, use the POSIX sh(1) string-comparison operator `=` instead of `==`.
2019-11-05 15:36:09 -06:00
David Young
1b01b6d60b Get the path to prefix right: needs a ../ to back out of subdirectory
c/.
2019-11-05 15:13:02 -06:00
David Young
d459daa1f7 Make this script relocatable again: derive a relative path for the
original installation prefix from the examples prefix.  Use that
relative path to locate the current installation prefix, always.  Fall
back to an absolute installation prefix if the relative path cannot be
derived.
2019-11-05 10:14:59 -06:00
Jerome Soumagne
ae490016b9 Add new H5R API that abstracts object, region and attribute reference types
Also support references to external files

Add new H5T_REF type and type conversion routines

Support conversion from H5T_REF_OBJ/DSET_REG to H5T_REF

Add H5Treclaim() API to reclaim memory of vlen/reference types

Deprecate H5Dvlen_reclaim()

Fix H5T_vlen_reclaim() and H5T_reclaim() to use private callback

Add H5T_ref_reclaim()

Move previous H5R APIs to H5Rdeprec.c

Clean up H5Ocopy

Separate H5O_copy_expand_ref() to H5Ocopy_ref()

Add support for copying new reference types

Clean up deprecated routines to go through VOL and same code path

Fix return codes in existing trefer.c test

Rename trefer.c to trefer_deprec.c

trefer.c is for new references

Add performance test for trefer

Add additional obj_copy_ref test

Make use of tokens and blobs to store references

Skip blob encoding for object references

Start adding new reference examples
2019-10-08 14:30:24 -05:00
David Young
b8a93a7224 Let us override the examples directory using --with-examplesdir=DIR.
This is handy for NetBSD where HDF5 examples are installed
by convention in $prefix/share/examples/hdf5/ rather than in
${prefix}/share/hdf5_examples/, which is the HDF5 default.

Place hdf5_examples/ under ${datarootdir} which on most systems will be
${prefix}/share/, anyway.
2019-10-03 16:01:40 -05:00
David Young
7bb8d071c6 Under the examples directories, always find the installed HDF5
executables and scripts using @prefix@ instead of a relative
path, because the number of ../ in the relative path will be
different on NetBSD than on other systems.

Examples on NetBSD are installed at ${prefix}/share/examples/hdf5/
instead of at ${prefix}/share/hdf5_examples/, by convention.  It may be
the same on other BSDs, I'm not sure.
2019-10-03 16:01:40 -05:00
Quincey Koziol
0a7c64f6e8 Remove reference to h5_vol_external_log_native. 2018-12-06 11:11:28 -06:00
Dana Robinson
b33a2e7dfe Fixed warnings in the VOL example and run it from the script. 2018-10-21 10:08:26 -07:00
Larry Knox
d20fd310e4 Change prefix in example scripts to relative path to bin. This was done
for 1.8, and works wherever installed without the need to replace the
original prefix.
2018-08-23 07:37:00 -05:00
Quincey Koziol
d5c3ec8b93 Changes to make timers within the library monotonic. 2017-09-03 02:53:28 -05:00
Larry Knox
89fbe00dec Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
  Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
  Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
  Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
  Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
2017-04-25 16:05:36 -05:00
Elena Pourmal
bc6873d3bd [svn-r27025] Enabled compilation and run for the new vds examples for "make installcheck"; added to MANIFET. 2015-05-05 16:35:10 -05:00
Neil Fortner
6a27582a44 [svn-r26781] Merge revisions 26305 through 26780 from trunk to vds branch.
Tested: ummon
2015-04-10 18:00:48 -05:00
Larry Knox
3032f3adf3 [svn-r26711] Recommitting revisions 26669 and 26670, removing VPATH and redundant /usr/include and lib in fcompile and link flags checks, now that I have run reconfigure.
Also changed paths to h5cc, etc. in scripts to run installed examples from relative paths to absolute paths.

Tested with h5committest.
2015-04-02 16:07:53 -05:00
Elena Pourmal
dd5a137083 [svn-r26564] Modified related files after adding example/h5_vds-percival.c
Tested on jam.
2015-03-24 17:56:24 -05:00
Elena Pourmal
ca2a0b80c5 [svn-r26420] Added new example for simple I/O. Modified other examples according to the suggestion in H5VDS-7 (see VDS-178) 2015-03-10 17:15:20 -05:00
Elena Pourmal
802fac804d [svn-r26376] Added new examples for fixed-size Excalibur and for Eiger use cases. Fixed several typos.
Tested on jam.
2015-03-05 18:04:57 -05:00
Elena Pourmal
3c9c263e5a [svn-r26359] Added h5_vds-exc.c to misc. files and ran bin/reconfigure.
Tested on jam.
2015-03-04 12:26:33 -05:00
Elena Pourmal
7881deb15e [svn-r26268] Added VDS example.
I ran bin/reconfigure on jam and it modified test/Makefile.in. May be Neil fixed Makefile.am,
but didn't run reconfigure?

Tested on jam.
2015-02-21 22:26:08 -05:00
Scot Breitenfeld
7155aa6f1d [svn-r23091] Changed C examples to reflect changes in documentation via Barbara;
mainly program additions from tutorial.

Tested: jam (gnu compilers)
2012-12-11 23:00:34 -05:00
Dana Robinson
f1df456412 [svn-r22170] Removed extraneous svn executable properties from non-executable files. 2012-03-28 14:30:59 -05:00
Larry Knox
a2f52de36d [svn-r20720] Merge changes to scripts to run installed examples from hdf5 1.8.7 r 20718. The
default prefix in the scripts will use the compile scripts in the installed bin
 directory.
2011-05-04 11:43:16 -05:00
Larry Knox
60abcfd2e8 [svn-r20482]
Fixed issue HDFFV-5866 (BZ 2156).  Changed scripts to run examples to use specific names for compiled executable files instead of a.out, which did not work on Cywin as it produces a.exe by default.  Removed issue from known problems section of RELEASE.txt.

Tested with Cygwin 1.7.8 on Windows 7.

This line, and those below, will be ignored--

M    release_docs/RELEASE.txt
M    hl/c++/examples/run-hlc++-ex.sh.in
M    hl/fortran/examples/run-hlfortran-ex.sh.in
M    hl/examples/run-hlc-ex.sh.in
M    c++/examples/run-c++-ex.sh.in
M    fortran/examples/run-fortran-ex.sh.in
M    examples/run-c-ex.sh.in
2011-04-12 12:58:57 -05:00
Larry Knox
155b00d8ff [svn-r19506] Bring changes from revisions 19408, 19421, and 19442 from branches/hdf5_1_8 to trunk. These revisions reorganize the compile scripts using h5cc.in, h5fc.in, and h5c++.in, add checks for installed examples to the scripts that run them after installation, and add DESTDIR for install as needed for RPMs.
Tested on amani, heiwa and jam by h5committest and with CYGWIN.
2010-10-04 12:15:30 -05:00
Larry Knox
10a8b060ca [svn-r19059] Brought changes from hdf5_1_8 to add version information for fortran and c++ compilers in libhdf5.settings file and configure output (r18836), to install examples as part of make install (r18680), and to provide scripts to compile and run the examples after they are installed (r18817).
Tested with new/h5committest on amani, heiwa, and jam.
2010-07-08 21:52:14 -05:00