Commit Graph

12 Commits

Author SHA1 Message Date
Dana Robinson
b9470be379
Plugin test cleanup (#1479)
* Autotools plugin test cleanup

* Combines filter, VFD, and VOL plugin tests
* Adds VFD plugin tests to the Autotools
* Implements a uniform shell script naming scheme in test/

* codespell fix

* Changes after code review
2022-03-10 12:22:16 -06:00
Allen Byrne
5580d7ec81
Fix directory variable in shell scripts (#1273)
* Fix testswmr scripts with utils/test variable

* Change format of configure var assignment

* quote the variable value in configure

* Use sh.in expected var pattern

* Only ref builddir in script

* Create vars for utils/test and test as H5_<path>_BUILDDIR

* Use abs_top_builddir in test scripts

* Change script var to make it easier to read.

* Use @abs_top_builddir@ directly in paths

* Correct typos/comment
2021-12-09 23:06:53 -06:00
Allen Byrne
83cf2cb15b
Convert vds swmr test script to powershell (#1245)
* Convert SWMR shell scripts to Windows powershell.

* Use $LastExitCode instead of $? in script

* Prevent execution in a different window

* Github #969 Use stdout instead of file for configure check (#1089)

* Use stdout instead of file for configure check

* Make change requested by #1157

* Change fortran to use stderr for configure

* Correct typo

* remove obsolete file check

* Fortran statement fix

* Don't allow H5Pset(get)_all_coll_metadata_ops for DXPLs (#1201)

* Fixes const warnings in H5ES package (#1211)

* Quiets a 'set but not used' warning in h5diff_array.c (#1210)

* Convert vds swmr test script to powershell

* Enable vdsswmr powershell test

* Add configure vdsswmr statement

* Correct powershell script vars

* Convert SWMR shell scripts to Windows powershell.

* Use $LastExitCode instead of $? in script

* Prevent execution in a different window

* Github #969 Use stdout instead of file for configure check (#1089)

* Use stdout instead of file for configure check

* Make change requested by #1157

* Change fortran to use stderr for configure

* Correct typo

* remove obsolete file check

* Fortran statement fix

* Convert vds swmr test script to powershell

* Enable vdsswmr powershell test

* Add configure vdsswmr statement

* Correct powershell script vars

* Cleanup review issues

* Fix variable assignment

* Change the wait function to pass in the path

* Disable actual test execution until programs fixed

* Adjust copyright text

* Fix spelling

Co-authored-by: jhendersonHDF <jhenderson@hdfgroup.org>
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
2021-12-08 11:21:15 -06:00
Allen Byrne
6d4d0fb13d
Move test utilities to utils/test folder (#1109)
* Move test utilities to utils/test folder

* Fix makefile assignment

* Add new dir

* add new folder

* Correct copied makefile

* Fix dir typo

* Add missing include dir

* Remove unnecessary lib link

* Correct dependent dirs

* Fix conditional checks

* Disable test if not built

* fix path to executable

* Use fixture for swmr_vfd check

* Add release note

* Correct shell tests and c++ flag warning

* Update autotools c++ warning

* Fix typo
2021-10-20 08:25:06 -05:00
Allen Byrne
3600d33f10
CMake should use the output dir programs for shell scripts (#928) 2021-08-19 16:03:05 -05:00
Dana Robinson
62a5443bd7
Various CMake changes (#679)
* Committing clang-format changes

* Several CMake updates:

* Removes unused HDF5_ENABLE_HSIZET
* Switches TEST_SHELL_SCRIPTS to ON
* Sets SH_PROGRAM to bash instead of sh

* Set default build type back to RelWithDebInfo

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
2021-05-24 08:55:08 -05:00
Allen Byrne
12082e728d
CMake changes to byproducts - ninja warnings (#568)
* OESS-98 convert plugin option to FetchContent, add tests

* Fixes for pkcfg files because of plugin option

* OESS-98 fix tools test for plugins

* Keep doxygen comments under 100 chars long - format hint

* Whitespace

* HDFFV-11144 - Reclassify CMake messages

* HDFFV-11099/11100 added help text

* Reworked switch statement to compare string instead

* Fix typo

* Update CDash mode

* Correct name of threadsafe

* Correct option name

* Undo accidental commit

* Note LLVM 10 to 11 format default changes

* Update format plugin

* Undo clang-format version 11 changes

* One more correction

* Update supported platforms

* Revert whitespace changes

* Correct whitespace

* Changes from PR#3

* HDFFV-11213 added option to control gcc10 warnings diagnostics

* HDFFV-11212 Use the new references correctly in JNI utility and tests

* format source

* Fix typo

* Add new test file

* HDFFV-11212 - update test and remove unused arg

* Minor non-space formatting changes

* Use H5I_INVALID_ID instead of "-1"

* source formatting

* add missing testfile, update jni function

* Undo commit of debug code

* remove mislocated file

* Fix h5repack test for handling of fapls and id close

* Update h5diff test files usage text

* HDFFV-11212 add new ref tests for JNI export dataset

* src format update

* Remove blank line typo

* src format typo

* long double requires %Lg

* Another long double foramt specifer S.B. %Lg

* issue with t128bit test

* Windows issue with h5dump and type.

* Fix review issues

* refactor function nesting and fix error checks

* format fixes

* Remove untested functions and javadoc quiet comments

* Restore TRY block.

* Change string append errors to memory exception

* revert to H5_JNI_FATAL_ERROR - support functions need work

* Add assertion error for h5util functions

* remove duplicate function

* format fix

* Revert HD function error handling

* Update copyright comments

* GH #386 java folder copyright corrections

* Whitespace

* GH #359 implement and fix tools 1.6 API usage

* remove excessive comments

* Flip inits to correct ifdef section

* rework ifdef to be simpler

* format issue

* Reformat ifdef inits

* remove static attribute

* format compliance

* Update names

* Revert because logic relies on float not being int

* Changes noticed from creating merge of #412

* Double underscore change

* Correct compiler version variable used

* Remove header guard underscores

* Whitespace cleanup

* Split format source and commit changes on repo push

* remove pre-split setting

* Change windows TS to use older VS.

* correct window os name

* HDFFV-11212 JNI export util and Javadoc

* Suggested review changes

* Another change found

* Committing clang-format changes

* HDFFV-11113 long double in tools

* HDFFV-11113 add note

* Disable long double tests for now

* HDFFV-11228 remove arbitrary CMake warning groups.

* Make each flag a string

* Some Javadoc warning fixes

* Updated javadoc fixes

* # WARNING: head commit changed in the meantime

HDFFV-11229 Fix long double usage in tools and java

Changed h5dump and h5ls to just print 128-bit for long double type.
Added test and file for dataset and attributes with all three float
types.

* Committing clang-format changes

* HDFFV-11229 Add release note

* HDFFV-11229 windows testfile needed

* fix typo

* Remove non supported message text

* HDFFV-11229 - change ldouble test to check both native and general

* HDFFV-11229 add second file compare

* HDFFV-11229 fix reference file

* HDFFV-11229 autotools check two refs

* HDFFV-11229 revert back to removal of NATIVE_LDOUBLE in tools output

* Committing clang-format changes

* Update release note

* Update attribute type of ref file

* Change source of ninja for macs

* try port instead of brew

* Recommended is to use brew.

* Undo non long double changes

* remove unneeded file

* Fix perl and doxygen CMake code

* Add "option" command for clang options

* Rework CMake add_custom to use the BYPRODUCTS argument

* Add stamp files to BYPRODUCTS

* Only one copy of file exists

* Fix custom cmmand depends targets

* Fix fortran custom command DEPENDS

* Add LD_LIBRARY_PATH to tests

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
2021-04-23 21:22:29 -05:00
Allen Byrne
b2c78e15cf
Cleanup CMake code for doxygen and perl shell scripts (#552)
* OESS-98 convert plugin option to FetchContent, add tests

* Fixes for pkcfg files because of plugin option

* OESS-98 fix tools test for plugins

* Keep doxygen comments under 100 chars long - format hint

* Whitespace

* HDFFV-11144 - Reclassify CMake messages

* HDFFV-11099/11100 added help text

* Reworked switch statement to compare string instead

* Fix typo

* Update CDash mode

* Correct name of threadsafe

* Correct option name

* Undo accidental commit

* Note LLVM 10 to 11 format default changes

* Update format plugin

* Undo clang-format version 11 changes

* One more correction

* Update supported platforms

* Revert whitespace changes

* Correct whitespace

* Changes from PR#3

* HDFFV-11213 added option to control gcc10 warnings diagnostics

* HDFFV-11212 Use the new references correctly in JNI utility and tests

* format source

* Fix typo

* Add new test file

* HDFFV-11212 - update test and remove unused arg

* Minor non-space formatting changes

* Use H5I_INVALID_ID instead of "-1"

* source formatting

* add missing testfile, update jni function

* Undo commit of debug code

* remove mislocated file

* Fix h5repack test for handling of fapls and id close

* Update h5diff test files usage text

* HDFFV-11212 add new ref tests for JNI export dataset

* src format update

* Remove blank line typo

* src format typo

* long double requires %Lg

* Another long double foramt specifer S.B. %Lg

* issue with t128bit test

* Windows issue with h5dump and type.

* Fix review issues

* refactor function nesting and fix error checks

* format fixes

* Remove untested functions and javadoc quiet comments

* Restore TRY block.

* Change string append errors to memory exception

* revert to H5_JNI_FATAL_ERROR - support functions need work

* Add assertion error for h5util functions

* remove duplicate function

* format fix

* Revert HD function error handling

* Update copyright comments

* GH #386 java folder copyright corrections

* Whitespace

* GH #359 implement and fix tools 1.6 API usage

* remove excessive comments

* Flip inits to correct ifdef section

* rework ifdef to be simpler

* format issue

* Reformat ifdef inits

* remove static attribute

* format compliance

* Update names

* Revert because logic relies on float not being int

* Changes noticed from creating merge of #412

* Double underscore change

* Correct compiler version variable used

* Remove header guard underscores

* Whitespace cleanup

* Split format source and commit changes on repo push

* remove pre-split setting

* Change windows TS to use older VS.

* correct window os name

* HDFFV-11212 JNI export util and Javadoc

* Suggested review changes

* Another change found

* Committing clang-format changes

* HDFFV-11113 long double in tools

* HDFFV-11113 add note

* Disable long double tests for now

* HDFFV-11228 remove arbitrary CMake warning groups.

* Make each flag a string

* Some Javadoc warning fixes

* Updated javadoc fixes

* # WARNING: head commit changed in the meantime

HDFFV-11229 Fix long double usage in tools and java

Changed h5dump and h5ls to just print 128-bit for long double type.
Added test and file for dataset and attributes with all three float
types.

* Committing clang-format changes

* HDFFV-11229 Add release note

* HDFFV-11229 windows testfile needed

* fix typo

* Remove non supported message text

* HDFFV-11229 - change ldouble test to check both native and general

* HDFFV-11229 add second file compare

* HDFFV-11229 fix reference file

* HDFFV-11229 autotools check two refs

* HDFFV-11229 revert back to removal of NATIVE_LDOUBLE in tools output

* Committing clang-format changes

* Update release note

* Update attribute type of ref file

* Change source of ninja for macs

* try port instead of brew

* Recommended is to use brew.

* Undo non long double changes

* remove unneeded file

* Fix perl and doxygen CMake code

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
2021-04-19 07:28:32 -05:00
Larry Knox
4819f89d3f
Update license url (#332)
* Modify temporary rpath for testing in java example scripts.

* Update URL in source file Copyright headers for web copy of COPYING
file - src and test directories.
2021-02-17 08:52:04 -06:00
Vailin Choi
f808c108ed Fix for HDFFV-10659: The library abort with "infinite loop closing library"
after deleting attributes in densed storage.
The fix: When deleting attribute nodes from the name index v2 B-tree,
if an attribute is found in the intermediate B-tree nodes, which may be
merged/redistributed in the process, we need to free the dynamically
allocated spaces for the intermediate decoded attribute.
2018-12-28 16:49:11 -06:00
Allen Byrne
e5156823bd TRILABS-137 Convert tcheck_version script to cmake tests 2018-07-18 10:42:14 -05:00
Allen Byrne
47780cb4e0 TRILAB-31 Working locally 2018-07-16 13:01:53 -05:00