Commit Graph

5809 Commits

Author SHA1 Message Date
Quincey Koziol
233319898d [svn-r8143] Purpose:
New Feature.  (Contributed by Robb)

Description:
    Allow h5ls to specify a VFL with the '--vfl=' command line flag.

    Add MPI-I/O & MPI-POSIX VFL drivers to list of drivers available for
h5ls and h5dump.

Platforms tested:
    FreeBSD 4.9 (sleipnir) w/parallel
    h5committested
2004-02-01 22:32:41 -05:00
Quincey Koziol
0ce42d9ed9 [svn-r8142] Purpose:
Fix build with C++ compiler

Description:
    Add file driver header files for prototypes.

Platforms tested:
    FreeBSD 4.9 (sleipnir) w/CC=g++
    too obscure to require h5committest
2004-02-01 22:19:39 -05:00
Quincey Koziol
fd442eae18 [svn-r8140] Purpose:
Bug fix

Description:
    Move assertion to allow closing non-HDF5 files with the MPI-I/O VFD to
work correctly again.

Platforms tested:
    FreeBSD 4.9 (sleipnir)
    h5committest
2004-01-31 23:06:22 -05:00
Quincey Koziol
7388e8a3e4 [svn-r8139] Purpose:
Code cleanup

Description:
    Clean up compiler warnings.

Platforms tested:
    h5committested
2004-01-31 13:54:28 -05:00
Quincey Koziol
5646fd9b5e [svn-r8137] Purpose:
Bug fix.

Description:
    Allow H5Tget_native_type() to handle opaque fields in compound datatypes.

Platforms tested:
    FreeBSD 4.9 (sleipnir)
    too minor to require h5committest
2004-01-31 13:01:33 -05:00
Quincey Koziol
6cf56ca817 [svn-r8136] Purpose:
Optimization

Description:
    Speed up various parts of the library by setting a global variable for the
endianness of the machine at library startup and use that variable instead of
repeatedly querying the endianness of the native int datatype.

Platforms tested:
    IBM p690 (copper)
    too minor to require h5committest
2004-01-31 10:28:40 -05:00
Quincey Koziol
eb4cc0556c [svn-r8135] Purpose:
Optimization

Description:
    Speed up core ID lookup routine (H5I_find_id) by re-structuring the logic
to reduce the number of 'if' statements.

Platforms tested:
    IBM p690 (copper)
    too minor to require h5committest
2004-01-31 10:21:17 -05:00
Quincey Koziol
10382a1799 [svn-r8134] Purpose:
Code cleanup

Description:
    Add destructor to match constructor fr VFLs when they are shut down by the
library.

Solution:
    Added H5FD_*_term() routines to "undo" changes made in H5FD_*_init()
routines.

Platforms tested:
    IBM p690 (copper)
    too minor to require h5committest
2004-01-31 10:19:48 -05:00
Quincey Koziol
efca86dc64 [svn-r8133] Purpose:
Optimization

Description:
    Improve the time this takes to run by hoisting a check for the signed-ness
of the source and destination datatypes out of inner loop.  (Speeds up test time
by almost 1/3)

Platforms tested:
    IBM p690 (copper)
    too minor for h5committest
2004-01-31 10:16:52 -05:00
Quincey Koziol
a2670d00c7 [svn-r8132] Purpose:
Bug fix

Description:
    Update debugging and profiling flags to include more information.

Platforms tested:
    IBM p690 (copper)
    too obscure for h5committest
2004-01-31 10:14:44 -05:00
Quincey Koziol
896fa1c409 [svn-r8131] Purpose:
Bug fix

Description:
    Add the debugging flag (-g) to profiling builds.

Platforms tested:
    FreeBSD 4.9 (sleipnir)
    too obscure for h5committest
2004-01-31 10:13:41 -05:00
Quincey Koziol
d05f6cde52 [svn-r8130] Purpose:
Bug fix

Description:
    Address the failure in the FORTRAN builds by making some more of the
MPI-related typedefs in the library available outside of parallel builds.

Platforms tested:
    Linux 2.4 (verbena) w/FORTRAN & C++
2004-01-31 10:09:19 -05:00
Quincey Koziol
c3b2c41327 [svn-r8129] Purpose:
Bug fix

Description:
    Include the private H5FD header instead of the public one, to address a
failure in building the library with C++ compiler.

Platforms tested:
    FreeBSD 4.9 (sleipnit) w/CC=g++
    not appropriate for h5committest
2004-01-31 09:15:24 -05:00
Quincey Koziol
2d8964517b [svn-r8128] Purpose:
Update dependencies after restructuring of MPI stuff
2004-01-30 21:32:19 -05:00
Quincey Koziol
327608ada8 [svn-r8127] Purpose:
Bug fix

Description:
    Fix a couple of bugaboos in the serial build that crept in

Platforms tested:
    FreeBSD 4.9 (sleipnir)
    too minor to require h5committest
2004-01-30 21:16:27 -05:00
Quincey Koziol
138bc92ebd [svn-r8126] Purpose:
Bug fix/optimization

Description:
    Address slowdown in MPI-I/O file metadata operations that was introduced
mid-stream.  We now _require_ a POSIX compliant parallel file system for the
MPI-I/O file driver (as well as for the MPI-POSIX file driver).
    Also optimized file open operation when the file is being created by
reducing the number of collective & syncronizing calls.
    Additionally, refactor the MPI routines into a common place, eliminating
duplicated code.

Platforms tested:
    FreeBSD 4.9 (sleipnir) w/parallel
    h5committest
2004-01-30 20:38:44 -05:00
Quincey Koziol
f499912c32 [svn-r8124] Purpose:
Updated with valid values for 'filter' parameter for new H5Pdelete_filter
routine.
2004-01-29 16:25:04 -05:00
Pedro Vicente Nunes
203799486d [svn-r8123] Purpose:
added more tests for szip and more verbose output

Description:

Solution:

Platforms tested:
linux
solaris
AIX

Misc. update:
2004-01-29 10:04:32 -05:00
Pedro Vicente Nunes
796fe1c402 [svn-r8122] Purpose:
h5repack new feature

Description:
in the SZIP settings, when the requested pixels per block parameter does not conform
to the SZIP specifications, instead of returning without applying the filter,
do an attempt to set this parameter to a valid value, issuing a warning in the process

Solution:

Platforms tested:
linux
solaris
AIX

Misc. update:
2004-01-28 17:48:47 -05:00
Pedro Vicente Nunes
48c7a5e35e [svn-r8121] Purpose:
bug fix

Description:
avoid reading and writing data when one of the dimensions is 0 (attributes case )

Solution:
linux
solaris
AIX

Platforms tested:

Misc. update:
2004-01-28 14:07:21 -05:00
Pedro Vicente Nunes
500292582f [svn-r8120] Purpose:
bug fix

Description:
avoid reading and writing data when one of the dimensions is 0

Solution:

Platforms tested:
linux
solaris
AIX

Misc. update:
2004-01-28 11:06:09 -05:00
Albert Cheng
5f16e07bbf [svn-r8118] Purpose:
improvement.

Description:
Created an entry for 2.96 and added -Wno-long-long to the CFLAGS
to suppress the thousands of 'long long' warnings because we are
using it and we know it is not in the C89 standard.

Platforms tested:
Only in verbena.

Misc. update:
2004-01-27 18:25:00 -05:00
Quincey Koziol
61a451f89e [svn-r8117] Purpose:
Code cleanup

Description:
    Add C++ and FORTRAN wrappers for new H5Pdelete_filter routine, along with
documentation and a note in the release notes.

Platforms tested:
    FreeBSD 4.9 (sleipnir)
    Linux 2.4 (verbena) w/ C++ and FORTRAN
    Too minor for full h5committest
2004-01-27 15:39:20 -05:00
Quincey Koziol
6042adf10b [svn-r8115] Purpose:
Bug fix

Description:
    Update gcc 3.4 flags to reduce optimization level to the same settings
as for gcc 3.0-3.3 due to code generation bugs at higher optimization levels.

Platforms tested:
    FreeBSD 4.9 (sleipnir)
2004-01-27 09:43:36 -05:00
Albert Cheng
b637785b44 [svn-r8114] Purpose:
Added color definition of new API.

Platforms tested:
Copper.
2004-01-27 08:35:18 -05:00
Pedro Vicente Nunes
afc3563b76 [svn-r8113] Purpose:
new library function H5Pdelete_filter
deletes one or all filters from a dataset creation property list
this was done for the NONE option of h5repack, added tests for this feature
added a test for the new function in /test/dsets.c


Description:

Solution:

Platforms tested:
linux
solaris
AIX

Misc. update:
2004-01-26 18:20:20 -05:00
HDF Admin
2a4253ceb8 [svn-r8112] Snapshot version 1.7 release 17 2004-01-25 20:04:58 -05:00
Albert Cheng
d5fb4dfcef [svn-r8111] Purpose:
Improvement

Description:
Changed parsing of verbose level by the common test library routine.
Change t_mpi.c to use the Verbose control better.

Platforms tested:
verena (pp).

Misc. update:
2004-01-24 18:04:22 -05:00
Quincey Koziol
ea84a9d78b [svn-r8109] Purpose:
Add note about B-tree not being balanced during deletion operations,
pointing interested readers at the Yao & Lehman paper.
2004-01-24 14:07:06 -05:00
Frank Baker
fd84f41ca2 [svn-r8105]
Purpose:
    Added 2004 to copyright dates line
Platforms tested:
    IE 5
2004-01-23 15:18:23 -05:00
Albert Cheng
e54c4df3d2 [svn-r8102] Purpose:
Removed debug print statements committed by mistake.

Platforms tested:
eirene.
2004-01-23 09:07:54 -05:00
Albert Cheng
72ca2d086f [svn-r8100] Purpose:
Added the function ParseTestVerbosity() to be shared by all programs.

Platforms tested:
Eirene.
2004-01-23 01:29:57 -05:00
Albert Cheng
06d17aff4d [svn-r8097] Purpose:
Bug fix

Description:
C++ compilers do not like the variable name new which is a kind word
for C++.  Changed it to newval instead.

Platforms tested:
Tested in Copper which is the one complained about the name.
2004-01-22 22:33:51 -05:00
Albert Cheng
f3113c02d5 [svn-r8096] Purpose:
Improvement.

Description:
Complete change of the verbose control to use the routines provided by
the test/libh5test.a.
Also put in a temporary fix for the H5Eset_auto() and H5Eget_auto()
so that the Compat code are isolated in one place rather than all over
the source file.

Platforms tested:
Tested in Eirene (parallel).

Misc. update:
2004-01-22 18:11:39 -05:00
Albert Cheng
cc17167703 [svn-r8094] Purpose:
New feature.

Description:
Added function SetTestVerbosity() so that other applications can
set the verbosity explicitedly without the whole testframe taking
over.
Added Verbose queries shorthands to make code more readable and
easier to change the levels of low, medium and high.

Platforms tested:
Eirene (both serial and parallel).

Misc. update:
2004-01-22 18:05:55 -05:00
Frank Baker
3300140c70 [svn-r8090]
Purpose:
    Correct 'strpad' values in h5tset/get_strpad_f
        e.g., H5T_STR_NULL_F corrected to H5T_STR_NULLPAD_F
Description:
    Safari, IE 5
2004-01-22 16:19:54 -05:00
Frank Baker
50ccc86982 [svn-r8089]
Purpose:
    Correct H5Pget_edc_check return values
Platforms tested:
    Safari, IE 5
2004-01-22 16:14:44 -05:00
Frank Baker
cc3b64b1e9 [svn-r8087]
Purpose:
    Correct H5G_stat_t struct description in H5Gget_objinfo
    Copy edits
Platforms tested:
    Safari, IE 5
2004-01-22 16:10:24 -05:00
Albert Cheng
7f5fd94b56 [svn-r8084] Purpose:
Improvement.

Description:
Verbosity level were specified by numbers which are not meaningful
and prone to typos.

Solution:
Adapted the Verbosity predefined level symbols from HDF4
and changed all numberic verbosity to symbolic values.
(Still need to convert some left over macros like MESSAGE.)

Platforms tested:
Eirene.
No h5committest since this is trivial.

Misc. update:
2004-01-22 15:57:34 -05:00
Quincey Koziol
618e7e7fbb [svn-r8082] Purpose:
Bug fix

Description:
    Tweak address comparison of external file list's heap address a bit to
pacify Windows.

Platforms tested:
    FreeBSD 4.9 (sleipnir)
    Asking Pedro to test on Windows
    Too minor to require h5committest
2004-01-19 15:59:44 -05:00
Quincey Koziol
99208cee65 [svn-r8079] Purpose:
Add tests & docs

Description:
    Added tests for the recent B-tree bug fixes & document their fix in the
release notes.

Platforms tested:
    FreeBSD 4.9 (sleipnir)
    Too minor to require h5committest
2004-01-19 13:48:48 -05:00
HDF Admin
43163efc35 [svn-r8077] Snapshot version 1.7 release 16 2004-01-18 03:24:00 -05:00
Quincey Koziol
35266165fe [svn-r8075] Purpose:
Bug fix.

Description:
    Fix problems in B-tree deletion routine that were corrupting the data
structure when the B-tree had several levels and the right-most item from a
leaf node that was the right-most child of an internal node was removed.
    Also address similar problems when a complete internal or right-most node
was removed.

    NOTE: The B-tree deletion routines are still _NOT_ maintaining the B-tree
properties correctly, that will be addressed in a future (hopefully soon) fix.

Platforms tested:
    FreeBSD 4.9 (sleipnir)
    too obscure to require h5committest
2004-01-16 15:25:58 -05:00
Pedro Vicente Nunes
efbde3c2f3 [svn-r8074] Purpose:
added h5repack and h5diff support for copying and differences of references to dataset regions
modified the behaviour in the diff of attributes, when a difference in name is detected
in the attribute cycle (number of attributes of object), instead of exiting the
cycle, rather continue


Description:

Solution:

Platforms tested:
linux
solaris
AIX

Misc. update:
2004-01-16 10:31:55 -05:00
Pedro Vicente Nunes
5112a79d81 [svn-r8068] Purpose:
changed the text of a error message related to the fail of H5Fopen to " unable to open file "

Description:

Solution:

Platforms tested:
linux (small change )

Misc. update:
2004-01-15 11:48:48 -05:00
Raymond Lu
be52cc0eba [svn-r8067] *** empty log message *** 2004-01-15 11:42:22 -05:00
Raymond Lu
c4d9f6ae10 [svn-r8066] Purpose: bug fix
Description: h5dump and h5ls failed an assertion check when a dataset's
    datatype is enumerate type and there are special characters in the names
    of these values.


Platforms tested: h5committest
2004-01-15 11:42:13 -05:00
Pedro Vicente Nunes
7f7fbb4718 [svn-r8062] Purpose:
bug fix

Description:
cases of rank 0 were not handled, now a warning is made that the dataset cannot be compressed

Solution:

Platforms tested:
linux
solaris
AIX

Misc. update:
2004-01-14 15:09:44 -05:00
Pedro Vicente Nunes
62a9b30a64 [svn-r8060] Purpose:
added a usage message for h5repack

Description:

Solution:

Platforms tested:
linux
solaris
AIX

Misc. update:
2004-01-14 12:45:20 -05:00
Quincey Koziol
727f26263f [svn-r8057] Purpose:
Bug fix

Description:
    Plug another small memory leak for fill-values.

Platforms tested:
    FreeBSD 4.9 (sleipnir)
    too minor to require h5committest
2004-01-13 13:56:32 -05:00