16733 Commits

Author SHA1 Message Date
Vailin Choi
1ef8577a4a Modifications based on comments from pull request review
(1) Remove unnecessary asserts
(2) Add code to insert bad offset values to the test file in gen_bad_offset.c
2017-08-23 16:23:09 -05:00
Vailin Choi
b07eb6efd0 Fix for HDFFV-10216 segfault in H5G_node_cmp3 with corrupt h5 file
Fix H5HL_offset_into() to return error when offset exceeds heap data block size.
Also fix other places that call this routine to detect error return.
2017-08-22 01:36:20 -05:00
Scot Breitenfeld
a6d5bf1a86 Merge pull request #630 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to develop
* commit '2a1e499b0134ed319cd9d60a6521ba83b3a2cfa8':
  changed comments, (HDFFV-10037)
  changed the test for NAG fortran compiler, (HDFFV-10037)
2017-08-03 10:30:26 -05:00
M. Scot Breitenfeld
2a1e499b01 changed comments, (HDFFV-10037) 2017-08-03 09:20:05 -05:00
M. Scot Breitenfeld
8138062d74 Merge branch 'develop' of ssh://bitbucket.hdfgroup.org:7999/~brtnfld/hdf5_msb into develop 2017-08-03 09:17:33 -05:00
M. Scot Breitenfeld
2332135332 changed the test for NAG fortran compiler, (HDFFV-10037) 2017-08-03 09:17:24 -05:00
Allen Byrne
00a50b6d72 Merge pull request #627 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '3635cc24b0759285eff37fe986e14e368a4a19b1':
  Fix misnamed file in test script
  Add h5repack tests for paged aggregation
2017-08-02 15:27:11 -05:00
Allen Byrne
3635cc24b0 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'a83b6a7c6e6aca1a329c274282c691ffb417abc4':
  Moved H5PL diagnostic pragmas to comply with old gcc requirements that they be outside of functions.
2017-08-02 13:24:31 -05:00
Allen Byrne
5615cc2a69 Fix misnamed file in test script 2017-08-02 12:42:40 -05:00
Dana Robinson
a83b6a7c6e Merge pull request #625 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:h5pl_commit to develop
* commit '81340c609ba5049b34845ff2f06b2025ec5d5b22':
  Moved H5PL diagnostic pragmas to comply with old gcc requirements that they be outside of functions.
2017-08-02 12:08:31 -05:00
Allen Byrne
02a56054b0 Add h5repack tests for paged aggregation 2017-08-02 10:53:17 -05:00
Dana Robinson
81340c609b Moved H5PL diagnostic pragmas to comply with old gcc requirements that they
be outside of functions.
2017-08-02 08:32:31 -07:00
Vailin Choi
8b8e7ae232 Merge pull request #620 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to develop
* commit '59e94f5009a1f738d9924be942448f8cf6355b00':
  Add h5repack tests for paged aggregation Add tests to h5repack.sh.in to verify options added for paged aggregation work as expected.
2017-08-02 01:49:42 -05:00
Scot Breitenfeld
560073c253 Merge pull request #624 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to develop
* commit '00d97d556b3e57129d8c7bbecf8b15497b3f056b':
  added test for NAG compiler and use the FC_BASENAME for NAG detection, (HDFFV-10037)
  added test for NAG compiler and use the FC_BASENAME for NAG detection, (HDFFV-10037)
2017-08-01 16:19:22 -05:00
Allen Byrne
6f9db7ed26 Merge pull request #623 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit 'f4e9bc21fa3d3d678ca80083dbd412b34c3ab91b':
  HDFFV-10256 add release note
  HDFFV-10256 Add test
  HDFFV-10256 correct len of string copy to the len of esc string
2017-08-01 15:45:40 -05:00
Allen Byrne
f4e9bc21fa HDFFV-10256 add release note 2017-08-01 15:45:17 -05:00
M. Scot Breitenfeld
00d97d556b added test for NAG compiler and use the FC_BASENAME for NAG detection, (HDFFV-10037) 2017-08-01 15:44:55 -05:00
M. Scot Breitenfeld
2d932366b2 added test for NAG compiler and use the FC_BASENAME for NAG detection, (HDFFV-10037) 2017-08-01 15:33:43 -05:00
Allen Byrne
e1a81b17e0 HDFFV-10256 Add test 2017-08-01 13:52:10 -05:00
Allen Byrne
538e910368 HDFFV-10256 correct len of string copy to the len of esc string 2017-08-01 13:36:51 -05:00
Dana Robinson
464926f2a3 Merge pull request #621 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:h5pl_commit to develop
* commit '9bcf8b2f2568083449ae3f9b6c2efbf6ed7f413a':
  Minor tweaks in response to code review.
  Fixed a failing Java plugin test.
  Major rework of H5PL package code before bringing VOL changes over.
2017-08-01 11:02:41 -05:00
Scot Breitenfeld
80745c7508 Merge pull request #622 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to develop
* commit '6e551a270bde6214b0e533e9cd9e845d2f9f4789':
  Removed extra Fortran flags, (HDFFV-10037)
2017-08-01 09:47:02 -05:00
M. Scot Breitenfeld
6e551a270b Merge branch 'develop' of ssh://bitbucket.hdfgroup.org:7999/~brtnfld/hdf5_msb into develop 2017-08-01 08:46:31 -05:00
M. Scot Breitenfeld
cf2da9a3d3 Removed extra Fortran flags, (HDFFV-10037) 2017-08-01 08:46:23 -05:00
Dana Robinson
9bcf8b2f25 Minor tweaks in response to code review. 2017-08-01 04:59:36 -07:00
Dana Robinson
fd0d8738e0 Merge branch 'develop' into h5pl_commit 2017-08-01 04:12:03 -07:00
Vailin Choi
59e94f5009 Add h5repack tests for paged aggregation
Add tests to h5repack.sh.in to verify options added for paged aggregation work as expected.
2017-07-29 01:10:25 -05:00
Scot Breitenfeld
823f6a1333 Merge pull request #619 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to develop
* commit '668b90b96dcb237208dcedd63e0f2b7da8a0328c':
  Rearranged where the substitution occurs.
2017-07-28 13:33:01 -05:00
M. Scot Breitenfeld
668b90b96d Merge branch 'develop' of ssh://bitbucket.hdfgroup.org:7999/~brtnfld/hdf5_msb into develop 2017-07-28 09:07:01 -05:00
M. Scot Breitenfeld
c08ee77858 Rearranged where the substitution occurs.
libtool does not pass the correct argument linking (-WL,-WL,,) for the
    NAG Fortran compiler on Linux (other OSs have not been tested).
    Therefore, detect if we are using the NAG Fortran compiler, and replace
    the wl="-Wl," for Fortran to wl="-Wl,-WL,," in the libtool file. (HDFFV-10037)
2017-07-28 09:05:39 -05:00
Allen Byrne
6e03d114c2 Merge pull request #617 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '04d6a3ec3c91cb30dce5dd5abb1b67021527c2fb':
  if PARALLEL copy seconf file to PAR folder
2017-07-27 15:27:24 -05:00
Scot Breitenfeld
4bf118f09b Merge pull request #616 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to develop
* commit '92491aa4b6dc2d4fa3c394e0aa928300379e1ced':
  added chmod 755 for h5fc
  removed chmod 755 for h5fc
  libtool does not pass the correct argument linking (-WL,-WL,,) for the NAG Fortran compiler on Linux (other OSs have not been tested). Therefore, detect if we are using the NAG Fortran compiler, and replace the wl="-Wl," for Fortran to wl="-Wl,-WL,," in the libtool file. (HDFFV-10037)
  Removed FCFLAGS when building the examples since they should already be included the h5fc wrapper. NAG complains about doubly declared options.
2017-07-27 13:22:29 -05:00
M. Scot Breitenfeld
92491aa4b6 added chmod 755 for h5fc 2017-07-27 13:09:36 -05:00
M. Scot Breitenfeld
d138f164dd removed chmod 755 for h5fc 2017-07-27 12:57:48 -05:00
M. Scot Breitenfeld
be5257f876 libtool does not pass the correct argument linking (-WL,-WL,,) for the
NAG Fortran compiler on Linux (other OSs have not been tested).
Therefore, detect if we are using the NAG Fortran compiler, and replace
the wl="-Wl," for Fortran to wl="-Wl,-WL,," in the libtool file. (HDFFV-10037)
2017-07-27 11:32:21 -05:00
Allen Byrne
04d6a3ec3c if PARALLEL copy seconf file to PAR folder 2017-07-27 11:18:52 -05:00
M. Scot Breitenfeld
972beffb59 Merge branch 'develop' of ssh://bitbucket.hdfgroup.org:7999/~brtnfld/hdf5_msb into develop 2017-07-27 08:54:44 -05:00
M. Scot Breitenfeld
b7f19967d7 Removed FCFLAGS when building the examples since they should already be included the h5fc wrapper. NAG complains about doubly declared options. 2017-07-27 08:52:21 -05:00
Allen Byrne
634cc5f99d Merge pull request #613 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '55d82c8f747b3a817a4a0b6b12e506b9c2dc0878':
  Add test header for log
  Verify default paths exist in table
  Make sure zip_perf program does not run concurrently
2017-07-26 11:02:55 -05:00
Allen Byrne
55d82c8f74 Add test header for log 2017-07-26 10:45:08 -05:00
Allen Byrne
cd0d804611 Verify default paths exist in table 2017-07-26 09:51:57 -05:00
Allen Byrne
373a37da01 Make sure zip_perf program does not run concurrently 2017-07-26 09:30:41 -05:00
Allen Byrne
8540b1d8fc Merge pull request #610 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '08d63d17f9ba80f205d54bc6526cb709a81ff0cb':
  Add the release note
  Correct copy to file name
  HDFFV-10246 Add check for string not null before use
  Correct case of var
2017-07-26 09:12:04 -05:00
Allen Byrne
08d63d17f9 Add the release note 2017-07-25 16:58:44 -05:00
Allen Byrne
1018256d55 Correct copy to file name 2017-07-25 15:44:25 -05:00
Allen Byrne
e790a0b42d HDFFV-10246 Add check for string not null before use 2017-07-25 15:15:20 -05:00
Allen Byrne
f5317e17a8 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '1fe3d5113aeedc4b67dae6b83984d1246c7a2701':
  Skip test in test/fheap.c when: a) multi/split drivers and b) persisting free-space or using paged aggregation strategy because the library will fail file creation (temporary) for the above conditions.
  Changes made based on RFC review comments Test the changes in a branch via daily testing.
2017-07-25 13:47:39 -05:00
Vailin Choi
3344185d5d Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '1fe3d5113aeedc4b67dae6b83984d1246c7a2701':
  Closed a wayward fapl ID in tools/test/misc/repart_test.c and tidied.
  Stripped C standard library headers from tools test code.
2017-07-25 11:29:51 -05:00
Vailin Choi
1fe3d5113a Merge pull request #604 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to develop
* commit '558864b99d945191dbf679efcc1cbfdf4baa2810':
  Skip test in test/fheap.c when: a) multi/split drivers and b) persisting free-space or using paged aggregation strategy because the library will fail file creation (temporary) for the above conditions.
  Changes made based on RFC review comments Test the changes in a branch via daily testing.
2017-07-25 11:29:21 -05:00
Allen Byrne
3a7c5f19c4 Correct case of var 2017-07-24 16:33:48 -05:00