2546 Commits

Author SHA1 Message Date
Larry Knox
3032f3adf3 [svn-r26711] Recommitting revisions 26669 and 26670, removing VPATH and redundant /usr/include and lib in fcompile and link flags checks, now that I have run reconfigure.
Also changed paths to h5cc, etc. in scripts to run installed examples from relative paths to absolute paths.

Tested with h5committest.
2015-04-02 16:07:53 -05:00
Allen Byrne
99baa66184 [svn-r26699] Generators are only built static 2015-04-01 16:02:43 -05:00
Neil Fortner
b31a086f3e [svn-r26690] Fix error in H5Sextent_copy
When the selection is set to all, H5Sextent_copy did not update the number of
elements in the selection in the destination space.  Fixed H5Sextent_copy to do
this.  Added tests for this functionality.

Tested: jam, koala, ostrich (h5committest)
2015-04-01 09:22:16 -05:00
Allen Byrne
45577d5693 [svn-r26660] HDFFV-9131: autotols rework
Remove CXX_CONDITIONAL
remove unneeded/obsolete sections.

h5commtitest
2015-03-30 13:55:21 -05:00
Mohamad Chaarawi
01093ad350 [svn-r26649] squish warnings. 2015-03-30 10:12:49 -05:00
Quincey Koziol
c2472b4d00 [svn-r26625] Description:
Bring r26543 from autotools_rework branch to trunk:

    Remove the LLONG_TO_LDOUBLE_CORRECT macro/define, it's working around
bugs in very old SGI/FreeBSD/Windows compilers.

Tested on:
    Linux/32 2.6.18 (jam) w/serial & parallel
    (Daily tested on branch for 2+ days)
2015-03-27 15:50:44 -05:00
Quincey Koziol
79f59eaf4d [svn-r26623] Description:
Bring r26513 from autotools_rework branch to trunk:

    Remove the LDOUBLE_TO_LLONG_ACCURATE macro/define, it's working around
bugs in older SGI, HP/UX, MacOSX and Windows .NET 2003 compilers.

Tested on:
    Linux/32 2.6.18 (jam) w/serial & parallel
    (Daily tested on branch for 2+ days)
2015-03-27 15:11:12 -05:00
Quincey Koziol
e30b4b17cf [svn-r26618] Description:
Bring r26511 from autotools_rework branch to trunk:

    Remove the FP_TO_INTEGER_OVERFLOW_WORKS macro/define, which is for working
around bugs in the Cray X1 compiler and is no longer supported.

Tested on:
    Linux/32 2.6.18 (jam) w/serial & parallel
    (Daily tested on branch for 2+ days)
2015-03-27 11:34:08 -05:00
Allen Byrne
eafd204b2d [svn-r26607] Correct test of plugin read when disabled to not print FAILURE when successful 2015-03-26 14:24:25 -05:00
Quincey Koziol
c4ec20a6de [svn-r26606] Description:
Bring r26508 from autotools_rework branch to trunk:

    Remove HW_FP_TO_LLONG_NOT_WORKS macro/define, it was only addressing
Windows .NET 2003 compiler issues.

Tested on:
    Linux/32 2.6.18 (jam) w/serial & parallel
    (Daily tested on branch for 2+ days)
2015-03-26 14:13:13 -05:00
Quincey Koziol
39373fbabb [svn-r26605] Description:
Bring r26503 & r26528 from autotools_rework branch back to the trunk:

    Remove old platform configure files: craynv, dec-flags, hpux11.23,
ia64-linux-gnu, nec-superux14.1, sv1-cray, x86_64-redstorm-linux-gnu

   Also remove CONVERT_DENORMAL_FLOAT, since this was only set in the
configure files being removed.

Tested on:
    Linux/32 2.6.18 (jam) w/serial & parallel
    (Daily tested on branch for 2+ days)
2015-03-26 13:34:11 -05:00
Quincey Koziol
c8a5172968 [svn-r26602] Description:
Bring r26502 from autotools_rework branch to trunk:

    Remove the H5_SW_ULONG_TO_FP_BOTTOM_BIT_WORKS and
H5_FP_TO_ULLONG_BOTTOM_BIT_WORKS macros/defines, as they are no longer used by
supported platforms.

Tested on:
    Linux/32 2.6.18 (jam) w/serial & parallel
    (Daily tested on branch for 2+ days)
2015-03-26 12:02:13 -05:00
Quincey Koziol
90cc5df290 [svn-r26598] Description:
Bring r26501 from the autotools_rework branch to the trunk:

    Remove ULLONG_TO_LDOUBLE_PRECISION macro/define, as it's targeting bugs
in the FreeBSD and Cygwin compilers.

Tested on:
    Linux/32 2.6.18 (jam) w/serial & parallel
    (Daily tested on branch for 2+ days)
2015-03-25 22:05:30 -05:00
Quincey Koziol
27dd4e0f05 [svn-r26597] Description:
Bring r26500 from autotools_rework branch to trunk:

    Remove the LLONG_TO_FP_CAST_WORKS macro/define, as it targets problems with
the Visual Studio 6 compilers.

Tested on:
    Linux/32 2.6.18 (jam) w/serial & parallel
    (Daily tested on branch for 2+ days)
2015-03-25 21:25:32 -05:00
Quincey Koziol
b03d04742d [svn-r26596] Description:
Bring r26499 from autotools_rework branch to trunk:

    Remove ULLONG_TO_FP_CAST_WORKS macro/define, as it only applies to older
platforms we aren't supporting any longer.

Tested on:
    Linux/32 2.6.18 (jam) w/serial & parallel
    (Daily tested on branch for 2+ days)
2015-03-25 20:47:41 -05:00
Quincey Koziol
c622cc7b38 [svn-r26595] Description:
Bring r26494 from autotools_rework branch back to trunk:

    Remove the LDOUBLE_TO_UINT_ACCURATE macro/define, it was addressing
problems with older Intel compilers on Linux that are no longer supported.

Tested on:
    Linux/32 2.6.18 (jam) w/serial & parallel
    (Daily tested on branch for several days)
2015-03-25 17:11:19 -05:00
Allen Byrne
451a91e53b [svn-r26594] Merge macros and fortran changes from dual_binary feature.
Tested: local linux
2015-03-25 17:08:46 -05:00
Quincey Koziol
d3114a96da [svn-r26591] Description:
Bring r26492 from autotools_rework branch back to trunk:

    Remove the FP_TO_ULLONG_ACCURATE and FP_TO_ULLONG_RIGHT_MAXIMUM
macros/defines, which were added to address problems with older PGI
compilers and HP-UX systems and are no longer supported.

Tested on:
    Linux/32 2.6.18 (jam) w/serial & parallel
    (daily tested on branch for >1 week)
2015-03-25 16:33:48 -05:00
Quincey Koziol
e89290b777 [svn-r26584] Description:
Bring r26485 from the autotools_rework branch to the trunk:

    Remove the ULONG_TO_FLOAT_ACCURATE macro/define, we no longer support the
Sandia system where it was necessary.

Tested on:
    Linux/32 2.6.18 (jam) w/serial & parallel
    (daily tested for >1 week)
2015-03-25 14:12:00 -05:00
Quincey Koziol
460b629e03 [svn-r26560] Description:
Bring r26483 from autotools_rework branch back to trunk:

    Remove INTEGER_TO_LDOUBLE_ACCURATE macro/define - we no longer support
SGI systems.

Tested on:
    Linux/32 2.6.18 (jam) w/serial & parallel
    (daily tested on branch for >1 week)
2015-03-24 17:06:27 -05:00
Vailin Choi
4de770788f [svn-r26514] Fix for HDFFV-9173:
H5Pset_istore_k() will validate the "ik" value to not exceed the max v1 btree entries (2 bytes)
The same check for H5Pset_sym_k()  "ik" value.
h5committested.
2015-03-20 17:37:17 -05:00
Jerome Soumagne
1cd7c16a9d [svn-r26509] Run reconfigure after merges from autotools_rework branch. 2015-03-20 14:15:51 -05:00
Quincey Koziol
9fb399b3d2 [svn-r26495] Description:
Bring r26258 from the autotools_rework branch to the trunk - remove
the LDOUBLE_TO_INTEGER_WORKS macro/define, which was addressing issues with
SGI systems that are no longer supported.

Tested on:
    Linux 2.6.x (jam) w/serial & parallel
    Daily tested on branch for >2 weeks
2015-03-19 17:22:06 -05:00
Quincey Koziol
5329a7d6f1 [svn-r26491] Description:
Bring r26257 from autotools_rework branch back to the trunk - removes
the LDOUBLE_TO_INTEGER_ACCURATE macro/define, which was addressing problems
with SGI systems and is no longer supported.

Tested on:
    Linux 2.6.x/32 (jam) w/serial & parallel
    Daily tested on branch for >2 weeks.
2015-03-19 16:52:50 -05:00
Dana Robinson
7659506fa8 [svn-r26438] Fixed some double promotion warnings from gcc 4.9.2. Most were in
format strings.

Tested on: h5committest
2015-03-11 17:51:14 -05:00
Allen Byrne
64f65d96d9 [svn-r26403] changes to comments and test should use unsigned var. 2015-03-09 11:21:56 -05:00
Dana Robinson
2a4ea9b24e [svn-r26392] Reinstates r26327-8, which had been reverted due to failures on
Solaris and OS X.

Added public API functions that expose the C library's memory allocator
for use in filter functions that need to allocate or resize buffers.

Intended for use with filter plugins, particularly on Windows, where C
runtime (CRT) issues can cause problems.

Fixes: HDFFV-9100

Tested on: h5committest + OS X (quail) + Solaris (emu)
2015-03-08 19:41:54 -05:00
Larry Knox
63bd09ec8b [svn-r26389] Revision 26387 failed with configure option --with-default-api-version=v16.
Changed H5Dcreate() to H5Dcreate2 in test/trefer.c line 633.

Tested with h5committest and with --with-default-api-version=v16 on platypus.
2015-03-08 12:06:02 -05:00
Scot Breitenfeld
ca0a4d24b6 [svn-r26373] Fix for HDFFV-7959:
H5Rdereference should check for default (HADDR_UNDEF) value and not continue processing and return so that ret value can be checked and handled properly 

Tested: jam (gnu)
2015-03-05 16:42:42 -05:00
Allen Byrne
5be5a4d832 [svn-r26365] HDFFV-8520: Add plugin control APIs.
Update windows WiX packaging.

h5committested
2015-03-05 11:09:22 -05:00
Dana Robinson
d8e3d8e908 [svn-r26333] Eliminates gcc warnings due to -Wunsuffixed-float-constants.
- Adds 'F' suffixes for most float constants.

- A few constants MUST be of type double. These now receive the long
  double L suffix and are then cast to double. I do this via a new
  H5_DOUBLE() macro which was added to H5private.h.

Fixes: HDFFV-9148

Tested on: h5committest
2015-03-01 13:48:54 -05:00
Larry Knox
ac290b5e45 [svn-r26331] Revert checking r 26327&8, which added new code and test that fails on solaris and macs.
Tested h5committest + emu and quail.
2015-02-28 12:00:03 -05:00
Dana Robinson
7462a7ef1c [svn-r26329] Merge of r26069, r26070, and r26072 from the features/autotools_rework
branch.

Removed the configure option that allows selective disabling of individual
internal filters (fletcher32, shuffle, etc.).

This feature mucked up the code with a lot of #ifdefs, saved very little space,
and was not scalable to a general scheme for library size reduction. We've
decided to remove the feature while we investigate a more general scheme for
decreasing the library size.

Part of: HDFFV-9086

Tested on: h5committest
2015-02-27 07:50:38 -05:00
Dana Robinson
7b7f0eafc5 [svn-r26328] Fixed a typo in tmisc.c. 2015-02-27 06:05:02 -05:00
Dana Robinson
c16d230101 [svn-r26327] Added public API functions that expose the C library's memory allocator
for use in filter functions that need to allocate or resize buffers.
Intended for use with filter plugins, particularly on Windows, where
C runtime (CRT) issues can cause problems.

Fixes: HDFFV-9100

tested on: jam (minor, localized change)
2015-02-26 22:33:25 -05:00
Mohamad Chaarawi
c4044e0c85 [svn-r26303] remove files with .clog2 extension generated by MPE when doing make clean. 2015-02-25 13:48:31 -05:00
Quincey Koziol
0ce8fddc73 [svn-r26301] Description:
Bring Neil's fix for error in H5S_extent_copy() back to the trunk.

Tested on:
    Mac OSX/64 10.10.2 (amazon) w/serial
    (h5committest forthcoming)
2015-02-25 12:29:30 -05:00
Quincey Koziol
2dae075569 [svn-r26300] Description:
Add H5Sis_regular_hyperslab() and H5Sget_regular_hyperslab() API routines,
along with tests.

Tested on:
    Mac OSX/64 10.10.2 (amazon) w/serial
    (h5committest forthcoming)
2015-02-25 12:05:16 -05:00
Dana Robinson
a7f70203b4 [svn-r26225] Removes broken open() call work-around that was specific to the now
unsupported Code Warrior compiler. Also removes the H5_NO_SHARED_WRITING
symbol from the pubconf file.

Fixes: HDFFV-9080

Tested on: jam only, after bin/reconfigure
           (all platforms should see no source changes)
2015-02-19 00:24:09 -05:00
Allen Byrne
73bb11dda3 [svn-r26208] Update cmake minimums 2015-02-18 11:56:22 -05:00
Scot Breitenfeld
b28b5fade9 [svn-r26188] Merged autotools fixes into the trunk:
HDFFV-9089, HDFFV-9091, HDFFV-9092, HDFFV-9094, HDFFV-9095
2015-02-16 12:17:49 -05:00
Mohamad Chaarawi
74fbb9e327 [svn-r26180] merge configure fixes for HDFFV-9068,9069,9096,9097,9135 from autotools_rework branch:
- Remove Infering parallel compilers (C and Fortran) from configure.ac
- Remove restriction to build shared with parallel
- Cleanup parallel sections in configure.ac
- remove large file support checks
- MPE fixes.

tested with h5committest.
2015-02-16 11:17:03 -05:00
Allen Byrne
fc93c6fe70 [svn-r26106] Disable flush1/flush2 test under debug VFD on Windows. 2015-02-02 12:01:15 -05:00
Allen Byrne
e05c75ea4e [svn-r26074] fix test destination 2015-01-29 12:58:27 -05:00
Allen Byrne
eb3900554e [svn-r26036] HDFFV-8736: Patch H5PL.c and test for cygwin plugin support.
Tested: local linux and cygwin
2015-01-26 13:03:18 -05:00
Mohamad Chaarawi
a24e3e5c86 [svn-r25994] revert adding the has_mpi_atomicity feature flag and use the has_mpi
flag instead.
2015-01-21 13:57:55 -05:00
Allen Byrne
21ef17f951 [svn-r25990] Add VFD flush2 depends on flush1 property to test 2015-01-21 09:31:46 -05:00
Allen Byrne
aafac8d770 [svn-r25986] HDFFV-9060: Changed test folder to use different test folders for VFDs and regular. Needed to set srcdir env var and specify working folder to the folders where all the reference files were copied.
Tested: local linux
2015-01-20 14:44:28 -05:00
Mohamad Chaarawi
aac2bb6182 [svn-r25984] change the message flag H5O_MSG_FLAG_FAIL_IF_UNKNOWN to
H5O_MSG_FLAG_FAIL_IF_UNKNOWN_AND_OPEN_FOR_WRITE. Will add a new
H5O_MSG_FLAG_FAIL_IF_UNKNOWN_ALWAYS with the new avoid_truncate patch
coming later.

tested h5committest
2015-01-20 12:17:05 -05:00
Allen Byrne
671006a10d [svn-r25953] Comment out printf statement as it caused system resource issues on Windows. Test now executes in 1/10 of time.
Tested: local linux and Windows
2015-01-05 16:32:43 -05:00