* commit '3dde6d0e32461f46630f814a2fdfbd4c813703bf':
Updated the code and RELEASE.txt note per comments from John Mainzer
Try to address most of the issues raised by Dana in the code review
Made edits suggested by John as part of the code review
Update the MANIFEST and release_docs/RELEASE files
Add a test for parallel reads of independent files using MPI subgroups
Edits to the file open optimization and associated test code to bring them closer to the HDF5 library's unwritten coding standards. Also bug fix to repair a hang in testphdf5.
The initial coding for the superblock read optization
code to bring them closer to the HDF5 library's unwritten
coding standards. Also bug fix to repair a hang in testphdf5.
Tested parallel/debug on Charis and Jelly, parallel/production on Jelly.
* commit 'abcf30f232914c1ec9b8c5f2a3bb3a621af7bfe4':
HDFFV-10284 Add VS2017 support
Add commentary around calling H5Screate_simple with a single element
Miscellaneous improvements (cont.) Description: Put back H5Location::getNumObjs and marked as deprecated in favor of Group::getNumObjs. Platforms tested: Linux/32 2.6 (jam) Darwin (osx1010test)
Miscellaneous improvements Description: Moved H5Location::getNumObjs to Group::getNumObjs (i.e., H5Gget_info) Switched reinterpret_cast to static_cast in H5Object::iterateAttrs Miscellaneous cleanup Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
HDFFV-10282 refactor out assert calls in tools
Fix the t_bigio test so that it runs on 32bit machines
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
1) Added code test/page_buffer.c to verify that page buffering is
disabled in parallel builds.
2) Added code to test/cache_image.c to verify correct interaction
between evict on close and cache image -- in particular management
of a file containing a cache image containing dirty metadata that
has been opened R/O. Also fix for the bug exposed.
3) Added code to testpar/t_cache_image.c to verify expected procedure
for reading cache images, and also supporting stats collection code
needed for the test.
4) Repair of an overactive sanity check in H5C__reconstruct_cache_contents().
5) Other minor tidies in passing.
Tested serial and parallel, debug and production on Jelly.
associated bug fixes.
Also, modifications to H5PB_dest() to flush the page buffer before
destroying the page buffer. This is necessary, as when persistant
free space managers are enabled, the page buffer will typically contain
dirty FSM data at page buffer destroy time.
Tested serial/debug, serial/production, serial/check-vfd/debug,
parallel/debug, parallel/production on Jelly.
with an alignment threshold set to be larger than the chunk size but smaller
than the size of the small data aggregator.
Tested: koala, ostrich (h5committest); jelly, ummon
Switch test framework to dynamically allocate the testing array, and
expand the length of the description field.
Tested on:
MacOSX/64 10.11.5 (amazon) w/serial & parallel
(h5committest forthcoming)
Clean up more warnings: drop the warning count from ~1310 down to ~940,
with only 31 types of warnings in 148 files (down from 38 types in 167 files).
Tested on:
MacOSX/64 10.11.5 (amazon) w/serial & parallel
(h5committest forthcoming)
Move updated flush dependency code in metadata cache from revise_chunks
branch to trunk. Also many of the cleanups from r30111 in the revise_chunks
branch.
Tested on:
MacOSX/64 10.11.5 (amazon) w/serial, parallel & production
(h5committest forthcoming)
Bring object/dataset/group/named datatype features from revise_chunks
branch to trunk. Also CMake support for h5format_convert and a bunch of
misc. cleanups.
Tested on:
MacOSX/64 10.11.5 (amazon) w/serial, parallel & production
(h5committest forthcoming)
Normalize against the trunk, in preparation for final merge.
Tested on:
MacOSX/64 10.11.3 (amazon) w/serial & parallel
(h5committest not required on this branch)
NOTES:
- Developers will have to run autogen.sh before building with the autotools.
- autogen.sh takes the -p option to mimic the old bin/reconfigure behavior.
- The generated error, overflow and version headers have been left in place.
- The generated H5LT parser code has also been left in place.
- There are no changes for CMake users at this time.
Tested on: h5committest
Complete revamp of package initialization/shutdown mechanism in the library.
Each package now has a single init/term routine.
This new way should avoid packages being re-initialized during library
shutdown and is also be _much_ more proactive about giving feedback for
resource leaks internal to the library.
Introduces a new "module" header file for packages in the library
(e.g src/H5Fmodule.h) which sets up some necessary package configuration macros
for the FUNC_ENTER/LEAVE macros. (The VFL drivers have their own slightly
modified version of this header, src/H5FDdrvr_module.h)
Also cleaned up a bunch of resources leaks all across the library and tests,
along with addressing many warnings, as I encountered them.
Tested on:
MacOSX/64 10.10.5 (amazon) w/serial & parallel
Linux/64 3.10.x (kituo) w/serial & parallel
Linux/64 2.6.x (ostrich) w/serial
Bring the "metadata rings" code from its branch (mdc_rings_v2) to the trunk.
(This change will support the page buffering feature)
Tested on:
MacOSX/64 10.10.5 (amazon) w/serial & parallel
(h5committest forthcoming)
