larger than 32bits I/O depends on the support of fseeko. Windows does not
use that. Instead, it uses _fseeki64 to support larger than 32bits I/O.
Tested: jam (linus) and bangan (windows)
Also updated root CMakeLists.txt to output a message when unsopported options are configured with the PARALLEL option. CMake will still generate files.
Tested: windows and local linux
1) Move the test for H5D_EXT_PREFIX in links.c to a separate file: links_env.c
2) links_env.c will be used by testlinks_env.sh to test for the environmental
variable H5D_EXT_PREFIX in searching for the external linked file.
The parallel test ran out of memory because 32bit binary default to use
less memory. Changed RUNPARALLEL to use larger memory (LDR_CNTRL=MAXDATA=0x2000
0000@DSA).
Tested: BP parallel.
Fix compile error for Windows from previous checkin r19757.
Description:
Previous log:
Improve h5diff performance.
The following changes for improving h5diff performance:
1) use HDmemcmp() before comparing each elements
(memcmp() is very fast at both linew and jam)
2) replace the expensive H5Tequals() calls
3) retrieve datatype information at dataset level not each element level
for compound datasets
Tested:
jam (linux32-LE), Windows
Improve h5diff performance.
Description:
The following changes for improving h5diff performance:
1) use HDmemcmp() before comparing each elements
(memcmp() is very fast at both linew and jam)
2) replace the expensive H5Tequals() calls
3) retrieve datatype information at dataset level not each element level
for compound datasets
Tested:
jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE)
Fixed Bug# 1979 Output from h5ls -rdlS on nested compound datatypes is
difficult to parse.
Description:
Update to add curly brackets for the nested compound members, when
S (--simple) option is used with -l (--label), so user can tell
which members blong to which compound type.
Tested:
jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32)
Correct tests to use native datatypes consistently, and also to use
"normal" methods for performing collective I/O. Also, minor cleanups for
zeroing out buffers, etc.
Tested on:
AIX/64 6.? (bp) w/parallel
Fix the test script from the previous checkin r19729. expect output is
under misc/testfiles/ in srcdir.
Previous Log:
[BZ2072]Add compare output to expected test for help and version options
of mkgrp.
Tested:
jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE)
Fix the test script from the previous checkin r19726 due to contiguous
build system failure.
Previous Log:
[BZ2072]Add compare output to expected test for help and version options
of mkgrp.
Tested:
jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE)
Add a little bit of extra info to the output from h5debug when
displaying global heaps, and make it dump the file's superblock again when
an address is not given on the command line.
Tested on:
FreeBSD/32 6.3 (duty) w/debug
(too minor to require h5committest)
metadata confusion test that appeared after Albert modified the test.
Cursory commit test. No test on Abe as that system is down, the
fix is very minor, and it seems to work in the 1.8.6 branch
Fixed h5diff to handle variable-length strings in a compound dataset
correctly. Also variable-length string array in a compound dataset.
Bug #1989.
Description:
Garbage values were displayed when h5diff compared variable-length
strings (or string array) in a compound type dataset.
Tested:
jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (Mac32)
Add another test for shutting down open object IDs without using the
standard "close" routines.
Tested on:
Mac OS X/32 10.6.4 (amazon) w/debug & production
(too minor to require h5committest)
double to (unsigned) long and from (unsigned) long to long double. I added tests in configure.in
to detect these algorithms. Before I can figure out them, I disable the tests in dt_arith.c.
There are property changes to tools/misc, config, and Makefile.am when I brought the fix from 1.8.
Tested on jam, heiwa, amani, IBM Power6 Linux machine in Holland (huygens.sara.nl).
John Mainzer fixed the bug and added a test which wrote file and flush a few
time; close the file then open it by serial and read simple structure. I
changed the test to two parallel running parts of ..._writer and ..._reader
and have the reader verify the file after every flush by the writer.
Tested: parallel in Jam and Amani.
Do some extra range-checking on H5Pset_elink_acc_flags() calls.
Clean up some minor compiler warnings also.
Tested on:
Mac OS X/32 10.6.4 (amazon) w/debug & production
(too minor to require h5committest)
Move B-tree sanity checking down below revised node unprotect calls
in H5B_insert().
Tested on:
Mac OS X/32 10.6.4 (amazon) w/debug=all
(too obscure to require h5committest)
Bring Coverity revisions from branch back to trunk, and clean up some other
misc. compiler warnings also.
r19500:
Fix coverity items 1446 and 1447. Moved up calls to memset in test_cont in
ohdr.c so the test never tries to close uninitialized locations.
r19501:
Fix coverity items 1398-1445. Various uninitialized variable errors in fheap.c.
r19502:
Fixed coverity issue 579 and some additional warnings in the file as well.
r19503:
Bug fix: This fix addressed the "RESOURCE_LEAK" problems #789 and 790, run 26
r19504:
minor mods to try to keep coverity from flagging false positives.
r19505:
Fixed coverity issues 566 - 571. Declared variables that are passed to functions that use them as arrays to be arrays of size 1.
Tested on:
Mac OS X/32 10.6.4 (amazon) w/debug, production & parallel
(h5committested on trunk)
Replaced calls to H5Dcreate() and H5Acreate() with calls to H5Dcreate2()
and H5Acreate2() respectively in t_mdset.c.
This was done to repair a compile failure that occured on a build
with the --with-default-api-version=v16 config option
Cursory commit test
Bring some of Neil's changes to help support SWMR access in the v1
B-tree code from the revise_chunks branch back to the trunk.
Tested on:
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x,
w/C++ & FORTRAN, w/threadsafe, in debug mode
Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x,
w/C++ & FORTRAN, in production mode
Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
w/szip filter, w/threadsafe, in production mode
Linux/PPC 2.6 (heiwa) w/C++ & FORTRAN, w/threadsafe, in debug mode
Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
in production mode
Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in debug mode
Mac OS X/32 10.6.4 (amazon) in debug mode
Mac OS X/32 10.6.4 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
Mac OS X/32 10.6.4 (amazon) w/parallel, in debug mode
Fix nightly build error on non-linux platforms related to
the Fix for bug# 2040 - h5copy should fail gracefully for expected failure copying to non-exist nested group without -p option. (r19633)
Description:
- Updated to use standard C functions instead of strndup() due to failure on non-linux platforms.
- Changed to Use HDxxx macros for future reference.
- Correct indentation.
Tested:
jam, amani, heiwa, linew
