Description:
H5IdComponent.cpp: initialized a pointer to NULL
H5Object.cpp: removed functions being added by mistake
Update function headers for the rest.
Platforms tested:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
Description:
Removed macro H5_FILES from Makefile.in so that output files from the
example programs will not be installed.
Platforms tested:
Linux 2.4 (eirene)
SunOS 5.7 (arabica)
Description:
These data files are generated by the example programs and shouldn't
need to be in the CVS. Removed them.
Platforms tested:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
Code cleanup
Description:
Clean up almost all warnings from Windows builds.
Platforms tested:
FreeBSD 4.10 (sleipnir) w/parallel
Too minor to require h5committest
Purpose:
HDF5 now supports SZIP with no encoder.
Description:
SZIP can be configured to have both encoder and decoder or just to have the decoder. HDF5 can now query the configuration of any filter, and will throw errors if users try to write using a filter with encoding disabled.
Solution:
Added H5Zget_filter_info function, changed API for H5Pget_filter and H5P_get_filter_by_id. See SZIP RFC.
Platforms tested:
Copper (fortran, C++, parallel), Sleipnir (C++), Arabica (fortran, C++), Verbena (fortran, C++)
Misc. update:
Description: Added new API H5Fget_name and new test program called filename.c. This function
returns the name of the file by object ID(file, group, dataset, named datatype, and attribute)
which belongs to the file.
Platforms tested: h5committest and fuss.
Misc. update: MANIFEST and RELEASE.txt
Fixing minor bug
Description
The new function H5File::getFileSize was missing a return statement.
Added one.
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
Description: 1. Added H5Fget_filesize and test(in file_handle.c) which returns
the actual file size of an opened file. Also added to C++ API and test.
2. The error tests were messed up in test/Makefile.in.
Solution: 1. Call H5FDget_eof to return file size. 2. Corrected.
Platforms tested: h5committest
Misc. update: RELEASE.txt
Code update
Description:
Update C++ wrappers to use new ID reference counting mechanisms.
Platforms tested:
FreeBSD 4.9 (sleipnir) w/C++
Too focused to require h5committest
Add/Improve documentation
Description
Added doxygen documentation to H5PredType.cpp and made minor changes
to the others for either correction or clarification.
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
Misc. update:
Add more C++ wrapper and documentation - incrementally check-in
Description
Added another overloaded constructor to StrType.
Added doxygen documentation to H5IdComponent.cpp.
Corrected some comments.
This is an incremental check-in to preserve the code, corresponding
tests will follow in a few weeks.
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
Misc. update:
Add C++ wrappers - incrementally check-in
Description
Added wrapper for these C APIs:
H5Rcreate
H5Rget_obj_type
H5Rget_region
This is an incremental check-in to preserve the code, corresponding
tests will follow in a few weeks.
Platforms:
Linux 2.4 (eirene)
I'm checking the code out and test on arabica too.
Misc. update:
Add C++ wrappers - incrementally check-in
Description
Added wrapper for these C APIs:
H5Dget_offset
H5Dget_space_status
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
Misc. update:
Add another wrapper - incrementally check-in
Description:
Added an overloaded wrapper for H5Rcreate to H5Object.* and tests
will be added later. Also, corrected some comments.
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
Misc. update:
Add more C++ wrapper and documentation - incrementally check-in
Description:
Added doxygen documentation to:
H5DataSet.cpp
H5DataSpace.cpp
H5CommonFG.cpp
and a wrapper for H5Rcreate to H5Object.* with tests will be added
later.
There are more documentation need to be added to these files but
to preserve the changes, I check them in now.
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
Misc. update:
Add/Correct documentation - this file was left out by mistake from
this checkin.
Description:
Added doxygen documentation to:
Exception.cpp
H5CompType.cpp
H5FcreatProp.cpp
and corrected some typos in comments for:
H5AbstractDs.cpp
H5EnumType.cpp
H5File.cpp
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
Misc. update:
Add documentation and a missing function - incrementally check-in
(Note: these files supposed to be checked in with my checkin on
May 19, but were accidentally left out. -> same log message)
Description:
Added wrapper for H5Tget_nmembers to H5EnumType.*; it was
accidentally left out. Also, added doxygen documentation and
removed outdated comments.
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
Windows 2000
Add documentation and an overloaded function - incrementally check-in
Description:
Added Attribute::getName that takes no argument for user's convenience.
Also added Doxygen documentation to existing functions in H5Attribute.cpp.
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
Windows 2000
Misc. update:
Add documentation and a missing function - incrementally check-in
Description:
Added wrapper for H5Tget_nmembers to H5EnumType.*; it was
accidentally left out. Also, added doxygen documentation and
removed outdated comments.
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
Windows 2000
Misc. update:
Add more C++ wrappers and documentation - incrementally check-in
Description:
Added wrappers for:
H5garbage_collect
H5set_free_list_limits
to H5Library.*
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
Windows 2000
Misc. update:
Add more C++ wrapper - incrementally check-in
Description:
Added wrapper for H5Tis_variable_str to DataType class.
Tests for the new wrappers will follow in a few weeks.
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
Windows 2000
Misc. update:
Add more C++ wrappers and documentation - incrementally check-in
Description:
Added class VarLenType to provide wrapper for:
H5Tvlen_create
Added wrapper for H5Tis_variable_str to DataType class
Tests for the new wrappers will follow in a few weeks.
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
Windows 2000
Add more C++ wrappers and documentation - incrementally check-in
Description:
Added class ArrayType to provide wrapper for:
H5Tarray_create
H5Tget_array_ndims
H5Tget_array_dims
Test for the new wrapper will follow in a few weeks.
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
Windows 2000
Add more C++ wrappers and documentation - incrementally check-in
Description:
Added wrapper for:
H5Tdetect_class
Also, added Doxygen documentation to existing member functions of
AtomType and DataType. Test for the new wrapper will follow in a
few weeks.
Some typos and small format changes are done in H5File.cpp.
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
Windows 2000
Add more C++ wrappers - incrementally check-in
Description:
Added more wrappers for C H5F functions and added Doxygen documentation
to existing member functions of H5File. This is an incremental check-in
to preserve the code, corresponding tests will follow in a few weeks.
Newly added wrappers are for:
H5Fget_freespace
H5Fget_obj_count
H5Fget_obj_ids
H5Fget_vfd_handle
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
Windows 2000
Fix bug #124 (Bugzilla)
Description:
Build failed on Windows because the C++ API provides support for
Stream VFD, yet this feature is disabled on Windows, making its
support from the C library unavailable.
Solution:
Added #ifdef H5_HAVE_STREAM to properly support Stream VFD.
Platforms tested:
Linux 2.4 (eirene)
Windows 2000
Misc. update:
Purpose: Correct my mistake
Description:
I inadvertently deleted the changes that Ray and Quincey put in
these two files. Added them back.
Platforms tested:
SunOS 5.8-64 (sol)
Linux 2.4 (eirene)
Misc. update:
Add more C++ wrappers - incrementally check-in
Description:
Added wrapper for many C property list functions and added Doxygen
documentation to existing C++ functions in these files. This is
an incremental check-in to preserve the code, corresponding tests
will follow in a few weeks.
For H5PropList.h and H5PropList.cpp, added C++ wrappers for:
H5Pexist
H5Pclose_class
H5Pget
H5Pget_size
H5Pget_class_name
H5Pget_nprops
H5Pset
H5Pisa_class
H5Premove
H5Pequal
H5Pget_class_parent
For H5FaccProp.h and H5FaccProp.cpp, added C++ wrappers for:
H5Ps[g]et_driver
H5Ps[g]et_family_offset
H5Ps[g]et_fapl_core
H5Ps[g]et_fapl_family
H5Ps[g]et_fapl_stream
H5Ps[g]et_sieve_buf_size
H5Ps[g]et_meta_block_size
H5Ps[g]et_alignment
H5Ps[g]et_multi_type
H5Ps[g]et_fclose_degree
H5Pset_fapl_stdio
H5Pset_fapl_split
H5Pset_fapl_log
H5Pset_fapl_sec2
For H5FcreatProp.h and H5FcreatProp.cpp, added C++ wrappers for:
H5Pfill_value_defined
H5Premove_filter
H5Pget_filter_by_id
H5Pmodify_filter
H5Pall_filters_avail
H5Pset_shuffle
H5Ps[g]et_alloc_time
H5Ps[g]et_fill_time
H5Pset_fletcher32
For H5DxferProp.h and H5DxferProp.cpp, added C++ wrappers for:
H5Ps[g]et_dxpl_multi
H5Ps[g]et_small_data_block_size
H5Ps[g]et_hyper_vector_size
H5Ps[g]et_edc_check
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
SunOS 5.8-64 (sol)
Bug fix
Description:
Change C++ methods to match C prototypes for datatype overflow callback
routines.
Platforms tested:
FreeBSD 4.9 (sleipnir) w/C++
too minor to require h5committest
Description: A new exception handler for datatype conversion(set through
H5Pset_type_conv_cb) to replace the old overflow callback function(set
through H5Tset_overflow). This new handler can deal with overflow, precision
loss and fraction truncate during datatype conversion.
Platforms tested: h5committest
Misc. update: release_docs
Feature
Description:
Added to AddTest() a generic parameters pointer argument to
allow some extra parameters for some tests. E.g., test file
names can be customized during runtime and passed into the
test routines.
Platforms tested:
"h5committested".
Also run compat test in eirene.
Cleaning up warnings
Description:
Many exception constructors have warnings about reference to temporary
location because of the parameter initialization, for example,
"const string& var = 0."
Solution:
Changed "string&" parameters to pass by value for these constructors.
Consequently, passing string by value also takes care of char pointers
so the overloaded constructors for char pointers are then removed.
Also, instead of setting Exception::detailMessage to null string, I
set it to DEFAULT_MSG ("No detailed information provided") by default.
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
IA-64 (titan)
Purpose:
replaced name of delete filter with remove filter for the new function H5Premove_filter
Description:
Solution:
Platforms tested:
linux
Misc. update:
Code cleanup
Description:
Add C++ and FORTRAN wrappers for new H5Pdelete_filter routine, along with
documentation and a note in the release notes.
Platforms tested:
FreeBSD 4.9 (sleipnir)
Linux 2.4 (verbena) w/ C++ and FORTRAN
Too minor for full h5committest
Code cleanup
Description:
Remove duplicate output code accidentally left in after testing changes.
Platforms tested:
FreeBSD 4.9 (sleipnir)
Too minor to require h5committest
Code cleanup & reorganization
Description:
Move further in the testing framework cleanup, eliminating all the
global variables (moving them into testframe.c as static variables) from the
testing framework code and moving it into the libh5test.a.
Platforms tested:
FreeBSD 4.9 (sleipnir) w & w/o thread-safety, c++ & parallel
h5committested
Feature
Description:
Added option -showconfig which Shows the HDF5 library configuration summary
Platforms tested:
No h5committest test which does not test these tools.
Tested in eirene by hand.
Misc. update:
Code cleanup
Description:
Refactor library testing framework (used for the testhdf5 & ttsafe tests)
to remove almost all of the duplicated code, moving the common code into a
new 'testframe.c' source file.
Platforms tested:
FreeBSD 4.9 (sleipnir) w & w/o thread-safety
h5committest
Fix example
Description:
On Solaris 64 (Sol), the output has garbage for a dataset when
fill value is not set.
Solution:
Added setting fill value to the dataset first.
Platforms:
Only effected C++ API
Linux 2.4 (eirene)
SunOS sol 5.8 (sol)
Minor bug fix
Description:
Added missing "const" to the first parameter in two functions:
DSetCreatPropList::set/getFillValue
Platforms:
Only effected C++ API
SunOS 5.8 (sol)
Linux 2.4 (eirene)
Code cleanup
Description:
Changed version #'s returned from H5Pget_version from 'int *' to
'unsigned *' since we are never going to be using negative version #'s... :-)
Platforms tested:
FreeBSD 4.8 (sleipnir)
too small to need h5committest
Updated the copyright notice--mostly by rearranging
some text to make them consistent.
Solution:
Platforms tested:
"h5committested"--sol is down, so, no SUn test.
Misc. update:
Update/Fix
Description:
The Dependencies files weren't begin generated properly for C++.
Solution:
Modified the "dependencies" script to use "top_srcdir" only instead
of "srcdir", which tended to confuse matters. Regenerated the
Dependencies files.
Platforms tested:
Arabica (Small changes)
Misc. update:
Update
Description:
Revamped the configuration system. The configurations for the Fortran
and C++ libraries are no longer separate from the "main"
configuration system. This involved removing the "configure*" and
"aclocal.m4" files from the fortran/ and c++/ subdirectories. Also
merging settings in the config/ subdirectories into the main config/
subdirectory.
Fortran header files had to be modified a little for Linux. It was
checking if it was a Linux machine by some #defines, however with the
-std=c99 switch, these defines weren't there. I added a check for
some other ones which should be there whether the -std=c99 switch is
used or not.
Platforms tested:
Verbena (Fortran & C++)
Sol (Fortran & C++)
Copper (Fortran & C++)
Modi4 (Parallel, Fortran, & C++)
Misc. update:
Bug fix
Description:
Elena and I suspected that the order of *.cpp files in TEST_SRC
might have caused the failure of a C++ examples in the daily test.
Solution:
Reordered the files from:
compound.cpp h5group.cpp create.cpp readdata.cpp chunks.cpp \
extend_ds.cpp writedata.cpp
to:
create.cpp readdata.cpp writedata.cpp compound.cpp extend_ds.cpp \
chunks.cpp h5group.cpp
Platforms tested:
Tested on verbena and the examples still worked (without -tlocal.)
I'll be testing on other platforms later tonight, I'm trying to
catch the daily test!
Misc. update:
Code cleanup
Description:
Finish converting the B-tree 'K' values to use unsigned integers, rather
than signed ones, since negative amounts of entries in a B-tree node aren't
meaningful.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
Update configuration
Description:
Now that we've split the tree (Yea!), change the main trunk back to debug
on and production off.
Also, change the version # to 1.7.0
Changed enable-production as the default for release.
Platforms tested:
Only in eirene using pgcc and pgCC.
Did not use h5committest since the change is trivial
and Elena will test it at once. :-)
Misc. update:
update for release
Description:
Set the version information to 1.6.0-pre1 to get ready for
v1.6 release.
Platforms tested:
h5committested.
Misc. update:
Purpose:
Bug Fix
Description:
Changes needed to make "pmake" work on Modi4.
Solution:
Needed to add some null macro defines in the commence.in files.
Needed to remove a dependence on LIBH5TEST in the fortran make
since LIBH5TEST isn't used in the fortran stuff.
Platforms tested:
Modi4 (small change)
Misc. update:
Purpose: Maintenance
Description: I added three new configuration files in c++/config
directory for Cray SV1, T3E and T90IEEE
Solution:
Platforms tested: I used BlankForm in c++/config directory to create
new configuration files for Crays. Only test
on T3E is finally completed successfully. Two other
Crays are still running, and running, and running.
I am checking files in since they will not affect
any other platforms.
Binh-Minh and Bill,
could you please take a look since I made minimum changes
just to make it to work. I am not sure that everything is correct
even if it works.
Thanks!
Misc. update:
Bug fix
Description:
Missing returning error for failures occur in C++ examples.
Solution:
Added "return -1;" when an exception is caught.
Also, turned off automatic error printing so that the C++ API
will catch and handle the failures.
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
IRIX 6.5.11 (modi4)
Purpose: Maintenance
Description: Bumped the version number to 1.5.62 after creating
a tar ball for the fourth round of testing.
Solution: run bin/h5vers -s scipt on arabica
Platforms tested: N/A
Misc. update:
Bug Fix
Description:
Quincey discovered that the new compiler on SOL needs the
-features=tmplife flag. However, this flag is only available for
version 5.3 of the compiler (and up, we're assuming).
Solution:
Add this flag only if the version of the compiler is 5.3 or greater.
Platforms tested:
Sol and Arabica (only affects solaris machines)
Misc. update:
Improvement
Description:
If $CXX is not defined, configure will try a list of possible
C++ compiler name. That is not always desireable.
Solution:
Change configure to combine all powerpc-ibm-aix* to one version.
Add xlC as the default $CXX value.
Platforms tested:
Tested in Copper only since the change affect AIX machine only.
Misc. update:
Purpose:
Bug Fix
Description:
There was another GNU-make-ism in the C++ examples Makefile.in
that I didn't clean up.
Solution:
Changed the "$<" to the name of the file to compile.
Platforms tested:
Copper (Small fix...problem was on Copper).
Misc. update:
Bug Fix
Description:
On Kelgia, the h5c++ script file needs to be explicitly chmod'ed to
executable.
Solution:
Placed this at the end of the configure script (just like in the
other configure scripts).
Platforms tested:
Kelgia (Very small fix...only needed to test it on one platform).
Misc. update:
Purpose: Maintenance for the third round of testing
Description: Increased the version number to 1.5.59 after creating
a tar ball for testing.
Solution:
Platforms tested:
Misc. update:
Bug fix
Description:
Corrected an omission of a module needed by the testhdf5 program.
Platforms tested:
Only in modi4 as the change is small.
Misc. update:
Text cleanup
Description:
Re-worded some informative and error messages.
Remove/Updated outdated comments.
Platforms:
Linux 2.4 (eirene)
IRIX 6.5.11 (modi4)
Purpose:
Code cleanup
Description:
Moved a utility function out so other tests can use the same
function and avoid code duplication. Future utility functions
can also benefit from this move.
Platforms tested:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
IRIX 6.5.11 (modi4)
HPUX 11.00 (kelgia)
Cleanup
Description:
Remove h5c++ when distclean is called.
Solution:
Platforms tested:
Tested only in copper since the change is trivial.
Misc. update:
Bug fix and minor code enhancement
Description:
Missing methods to read/write C++ String for an attribute and
a dataset.
Solution:
Added overloaded functions read and write to H5::Attribute and
H5::DataSet.
Also, added another constructor StrType so the need to separately
set the length of the string type can be eliminated. It's minor
but convenient.
Made some minor changes to make error messages more readable.
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
IRIX 6.5.11 (modi4)
HPUX 11.00 (kelgia)
Utility Addition
Description:
Added h5c++ script file to compile HDF5 C++ applications.
Modified so that these are compiled only during a make check-install
action and then only with the h5c++ script.
Platforms tested:
Verbena (Fortran & C++)
Arabica (Fortran & C++)
Modi4 (Fortran & Parallel)
Misc. update:
API tweak.
Description:
The H5Sget_select_bounds() API call was using hsize_t arrays for retrieving
the 'start' and 'end' coordinates, which is counter to the rest of the dataspace
API.
Solution:
Change the arrays to be hssize_t instead.
Platforms tested:
FreeBSD 4.8 (sleipnir) w/C++
FreeBSD 4.8 (sleipnir) w/parallel
h5committested
Misc. update:
Updated all docs for this change.
Added 1.4 compatibility #ifdef's
Purpose: Maintenance for the second round of testing
Description: Used bin/h5vers to change version number to 1.5.55
Solution:
Platforms tested: arabica
Misc. update:
Code Cleanup
Description:
Warning messages were being produced by the "make" program because
the "docdir" was being specified twice as a target in the generated
Makefiles. This is because the "EXAMPLESDIR" was also defined as
"docdir".
Solution:
Made "EXAMPLESDIR" unique for C, Fortran, and C++ in the commence.in
file and removed EXAMPLESDIR from the Makefile.ins
Platforms tested:
Dangermouse (only affects make system, not code).
Misc. update:
Purpose: Maintenance
Description: I changed release version to 1.5.54.
Email about tetsing of 1.5.53 will be send after this checkins.
Solution: used bin/h5vers -s to change the version number
Platforms tested: Done on arabica
Misc. update:
Bug fix and feature
Description:
The patch to Makefile.in failed if an empty directory of fortran/examples
was left behind by a previous build.
Solution:
Attempted to put it in config/conclude.in just became a mess since
it is hard to predict when we will include examples in the subdirs
or not.
Borrow the structure of install-examples and do some handcode per
interface. The Makefile.in of each interface (C, Fortran, C++)
controls everything. Not very systematic but pretty clean for this
case.
Platforms tested:
h5committested.
Also tested in modi4 with various combinations of fortran, c++
enabled.
Misc. update:
Adding new platform support
Description:
Added support for the C++ API on hpux11.00 with the compiler aCC.
Because aCC doesn't use "std," a new macro H5_NO_STD is provided
and used where "std" is presented in the library.
In addition, changed several cout's when reporting errors to cerr's.
Platforms tested:
HPUX 11.00 (kelgia)
Linux 2.2x (eirene)
IRIX 6.5.11 (modi4)
SunOS 5.7 (arabica) - by Elena
Misc. update:
Adding new platform support
Description:
Added the config file to support the C++ API on hpux11.00 with
the compiler aCC.
Platforms tested:
HPUX 11.00 (kelgia)
Linux 2.2x (eirene)
IRIX 6.5.11 (modi4)
SunOS 5.7 (arabica) - by Elena
Misc. update:
Will update MANIFEST and release_docs/RELEASE for new features.
Bug Fix
Description:
"using namespace std" isn't supported on HP-UX. We ahve the H5_NO_STD
flag begin set, but it wasn't being used.
Solution:
Added the check to the #ifdef line to see if H5_NO_STD is defined
before trying to use it in the program.
Platforms tested:
Kelgia
Bug Fix
Description:
Kelgia needs the old header file format for #includes.
Solution:
Conditionally include the old header file format if
OLD_HEADER_FILENAME is defined.
Platforms tested:
Kelgia
