Commit Graph

20352 Commits

Author SHA1 Message Date
Allen Byrne
162497a3f9 Merge pull request #2031 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit 'c087ef41b637686ae5e783bfb0a48e91dbe3f58e': (28 commits)
  Add H5Rdestroy calls to cleanup
  Remove problem tests for now
  Add new test reference
  HDFFV-10876 fix compare reference
  HDFFV-10876 ignore old reference API tests
  Add missing quotes
  Fix windows 10 compile error
  Correct indentation
  Revert declaration used in macro.
  Revert declaration deletion.
  HDFFV-10876 add note
  Address compile warnings
  Fix compile errors - mostly in jni
  HDFFV-10876 Update dump to match DDL spec
  Add extra line
  Adjust whitespace
  Update h5ls help and rework dump_mem routines for attrs
  Update create calls
  Add debug compile option as comment
  Update reference calls
  ...
2019-12-09 10:43:05 -06:00
Allen Byrne
c087ef41b6 Add H5Rdestroy calls to cleanup 2019-12-08 14:43:06 -06:00
Allen Byrne
1cde6b2fba Remove problem tests for now 2019-12-08 14:03:05 -06:00
Allen Byrne
349656ecba Add new test reference 2019-12-08 13:58:35 -06:00
Allen Byrne
eed923ec70 HDFFV-10876 fix compare reference 2019-12-08 13:25:14 -06:00
Allen Byrne
1d3186ad45 HDFFV-10876 ignore old reference API tests 2019-12-07 15:05:08 -06:00
Allen Byrne
972cf8e60c Add missing quotes 2019-12-07 10:30:38 -06:00
Allen Byrne
bc20a7e47a Fix windows 10 compile error 2019-12-07 10:26:30 -06:00
Allen Byrne
7d6d3e2956 Correct indentation 2019-12-07 08:42:19 -06:00
Allen Byrne
7225519e2a Revert declaration used in macro. 2019-12-07 08:38:06 -06:00
Allen Byrne
b98f630009 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '9c3900d0bf05a65e59cce6dc613b38b240599d93':
  Add note to RELEASE.txt for H5Sselect_adjust.
  Add RELEASE.txt note for H5Sselect_project_interesection
  Minor tweaks noticed while going over VOL documentation.
2019-12-07 08:31:52 -06:00
Allen Byrne
73c8e2f9d6 Revert declaration deletion. 2019-12-07 08:31:12 -06:00
Dana Robinson
9c3900d0bf Merge pull request #2082 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop
* commit 'bbd4f7d2a0bea8f984868e2bf88dd1c5f5aa35e8':
  Minor tweaks noticed while going over VOL documentation.
2019-12-06 17:07:10 -06:00
Neil Fortner
26b8bb8e6c Merge pull request #2098 in HDFFV/hdf5 from ~NFORTNE2/hdf5_naf:develop to develop
* commit 'f6961c82bf3e7b848b071a0299dcc3753361e35d':
  Add note to RELEASE.txt for H5Sselect_adjust.
2019-12-06 16:19:50 -06:00
Neil Fortner
f6961c82bf Add note to RELEASE.txt for H5Sselect_adjust. 2019-12-06 16:18:33 -06:00
Neil Fortner
ac14c63146 Merge pull request #2093 in HDFFV/hdf5 from ~NFORTNE2/hdf5_naf:develop to develop
* commit '411241bea660411b99925edc8040139443fe8a74':
  Add RELEASE.txt note for H5Sselect_project_interesection
2019-12-06 14:36:11 -06:00
Neil Fortner
411241bea6 Merge branch 'develop' of ssh://bitbucket.hdfgroup.org:7999/~nfortne2/hdf5_naf into develop 2019-12-06 14:35:27 -06:00
Neil Fortner
848be85f00 Add RELEASE.txt note for H5Sselect_project_interesection 2019-12-06 14:34:56 -06:00
Allen Byrne
e6c54c372f Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'fa31520e25ec27140f8d0dfec859aede163d2201':
  Add RELEASE.txt note for HVLget_file_type()
2019-12-06 14:20:40 -06:00
Neil Fortner
fa31520e25 Merge pull request #2090 in HDFFV/hdf5 from ~NFORTNE2/hdf5_naf:develop to develop
* commit 'c7165f05444ce5ae6c5db50f2faf33023ba0eac0':
  Add RELEASE.txt note for HVLget_file_type()
2019-12-06 14:15:24 -06:00
Neil Fortner
c7165f0544 Add RELEASE.txt note for HVLget_file_type() 2019-12-06 14:14:22 -06:00
Allen Byrne
0d74deba5d HDFFV-10876 add note 2019-12-06 14:10:56 -06:00
Allen Byrne
fce2a31dc5 Address compile warnings 2019-12-06 13:55:34 -06:00
Allen Byrne
52c9749d6f Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'b816f4c4aaf9bc80dbde35158b520e693f135fa2':
  Fixed PR issues pointed out by Allen
  Remove the Copyright UofI per Larry's guidance
  Adds a new t_2Gio.c MPI test
2019-12-06 12:58:01 -06:00
Allen Byrne
cf61098fa6 Fix compile errors - mostly in jni 2019-12-06 12:57:38 -06:00
Richard Warren
b816f4c4aa Merge pull request #2056 in HDFFV/hdf5 from HDFFV-10929_2GB_testing to develop
* commit '7dfeab4863a25a79999fa1e5ede12a1aa685ca97':
  Fixed PR issues pointed out by Allen
  Remove the Copyright UofI per Larry's guidance
  Adds a new t_2Gio.c MPI test
2019-12-06 12:56:51 -06:00
Richard Warren
7dfeab4863 Fixed PR issues pointed out by Allen 2019-12-06 10:58:59 -05:00
Richard Warren
c62aaaff46 Remove the Copyright UofI per Larry's guidance 2019-12-06 09:33:55 -05:00
Dana Robinson
bbd4f7d2a0 Minor tweaks noticed while going over VOL documentation. 2019-12-05 22:10:02 -08:00
Allen Byrne
eb52c2ea6f Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '107bcbd3dfff51895c99ea3ff71afa0ce693a956':
  Implement support for using H5Dvlen_get_buf_size with non-native VOL connectors.
  Two fixes: (1) Set the version for reference datatype messge to H5O_DTYPE_VERSION_4. (2) Verify the decoded version for hyperslab selection.
  Add H5VL_MAP_OPTIONAL operation id (unused currently).
  Fix H5VL_token_t type and fix H5VL_loc_by_token to use H5VL_token_t *
  Change hdset_reg_ref_t and H5R_ref_t from arrays of unsigned char to structs containing those arrays.  Encapsulating the arrays in this way makes it easier to write and think about pointers to these types, casts to/from these types, etc.
2019-12-05 17:26:00 -06:00
Jerome Soumagne
107bcbd3df Merge pull request #2076 in HDFFV/hdf5 from ~JSOUMAGNE/hdf5:type_fixes to develop
* commit '7b03a1c03633d695b487642e54f897c715f8622e':
  Fix H5VL_token_t type and fix H5VL_loc_by_token to use H5VL_token_t *
  Change hdset_reg_ref_t and H5R_ref_t from arrays of unsigned char to structs containing those arrays.  Encapsulating the arrays in this way makes it easier to write and think about pointers to these types, casts to/from these types, etc.
2019-12-05 17:25:22 -06:00
Allen Byrne
e8ad5f6d1a HDFFV-10876 Update dump to match DDL spec 2019-12-05 17:21:02 -06:00
Neil Fortner
5efd80f6ec Merge pull request #2073 in HDFFV/hdf5 from ~NFORTNE2/hdf5_naf:vol_vl_buf_size to develop
* commit '12ac0587e7b9b18a56907aa78f68c084dd5b51b4':
  Implement support for using H5Dvlen_get_buf_size with non-native VOL connectors.
2019-12-05 16:13:12 -06:00
Neil Fortner
12ac0587e7 Implement support for using H5Dvlen_get_buf_size with
non-native VOL connectors.
2019-12-05 16:11:30 -06:00
Vailin Choi
8c9b8047ea Merge pull request #2079 in HDFFV/hdf5 from ~VCHOI/my_third_fork:bugfix/reference_ver_hyperslab_ver to develop
* commit '1e10b3212ed5904b69d9f4c4bcb4d0122dfd7c77':
  Two fixes: (1) Set the version for reference datatype messge to H5O_DTYPE_VERSION_4. (2) Verify the decoded version for hyperslab selection.
2019-12-05 16:11:08 -06:00
Neil Fortner
bdbe010fd3 Merge pull request #2078 in HDFFV/hdf5 from ~NFORTNE2/hdf5_naf:develop to develop
* commit '73709ef2fa2494e675566dd3310c6c8ebac01c18':
  Add H5VL_MAP_OPTIONAL operation id (unused currently).
2019-12-05 16:03:16 -06:00
Vailin Choi
1e10b3212e Two fixes:
(1) Set the version for reference datatype messge to H5O_DTYPE_VERSION_4.
(2) Verify the decoded version for hyperslab selection.
2019-12-05 15:09:23 -06:00
Neil Fortner
73709ef2fa Merge branch 'develop' of ssh://bitbucket.hdfgroup.org:7999/~nfortne2/hdf5_naf into develop 2019-12-05 14:57:35 -06:00
Neil Fortner
9cb7729730 Add H5VL_MAP_OPTIONAL operation id (unused currently). 2019-12-05 14:56:57 -06:00
Jerome Soumagne
7b03a1c036 Fix H5VL_token_t type and fix H5VL_loc_by_token to use H5VL_token_t * 2019-12-05 14:42:06 -06:00
David Young
60756183d9 Change hdset_reg_ref_t and H5R_ref_t from arrays of unsigned char to
structs containing those arrays.  Encapsulating the arrays in this way
makes it easier to write and think about pointers to these types, casts
to/from these types, etc.

An interesting side-effect that we probably should *not* rely on is
that the struct-encapsulation changes the alignment so that some GCC
warnings about casts that increase the alignment requirement of the
operand go away.  Warnings like that have to be taken seriously:  I will
add -Werror=cast-align to the default compiler flags so that they stop
the build quickly.

GCC warnings led me to some surprising casts in test/trefer.c. I found
that it was possible to make many simplifications after introducing the
struct-encapsulation that I described, above.

In test objcopy_ref `same_file` is assigned but never used.  Delete it.
2019-12-05 14:41:45 -06:00
Allen Byrne
4747e2f2ad Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'c7b3d6d6a5c1d376812e17c0ddb26f55334a2c59':
  Yanked -Wc++-compat from the flags used to build the C library in both the Autotools and CMake.
2019-12-05 09:30:11 -06:00
Dana Robinson
c7b3d6d6a5 Merge pull request #2072 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:cpp_warning_disable to develop
* commit '1ad02a445920578654d257bb66aa1e8e7e368018':
  Yanked -Wc++-compat from the flags used to build the C library in both the Autotools and CMake.
2019-12-04 18:08:57 -06:00
Allen Byrne
4f74548f53 Add extra line 2019-12-04 17:00:45 -06:00
Allen Byrne
11825bc525 Adjust whitespace 2019-12-04 16:59:03 -06:00
Allen Byrne
d552e97eae Update h5ls help and rework dump_mem routines for attrs 2019-12-04 16:36:32 -06:00
Allen Byrne
cc2407257a Update create calls 2019-12-04 12:35:48 -06:00
Allen Byrne
8f9005570a Add debug compile option as comment 2019-12-04 12:24:53 -06:00
Allen Byrne
ba8f2f1174 Update reference calls 2019-12-04 12:24:53 -06:00
Allen Byrne
e994c9cb4a Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'aa0b54e27e5d6f0b7c23fe5662d5c8f30898d7f4':
  Fixed missing blob callbacks in test VOL connectors.
  Add support for scalar dataspaces to H5Sproject_intersection.  Add checking for ank validity.
  Fix issues with using H5Pget_fill_value() with file datatypes retrieved from H5VLget_file_type().
2019-12-04 11:36:07 -06:00