Commit Graph

968 Commits

Author SHA1 Message Date
Scot Breitenfeld
6c4e3759f5 [svn-r27187] svn merge -r27135:27186 https://svn.hdfgroup.uiuc.edu/hdf5/trunk 2015-06-10 14:23:09 -05:00
Scot Breitenfeld
f2d14c76b8 [svn-r27186] added fix for jam with promoted reals and integers 2015-06-10 14:15:08 -05:00
Scot Breitenfeld
62401ac7c6 [svn-r27167] more DT fixes 2015-06-09 12:05:09 -05:00
Scot Breitenfeld
32703c9fc5 [svn-r27164] various bug fixes for DT 2015-06-08 16:13:15 -05:00
HDF Tester
02e9a43900 [svn-r27159] Snapshot version 1.9 release 221 2015-06-07 19:01:32 -05:00
Scot Breitenfeld
8641814c4e [svn-r27154] fixed issue with mis-matching long double between Fortran and C 2015-06-05 17:17:13 -05:00
Scot Breitenfeld
043173a689 [svn-r27151] fixed __float128 errors 2015-06-04 15:26:02 -05:00
Scot Breitenfeld
4d500d4902 [svn-r27140] fixed interger*16 support 2015-06-03 09:13:58 -05:00
Scot Breitenfeld
f486fe1a49 [svn-r27137] svn merge -r27115:27135 https://svn.hdfgroup.uiuc.edu/hdf5/trunk 2015-06-02 09:46:51 -05:00
Mohamad Chaarawi
fc45d5fcb0 [svn-r27133] - Add a new attribute function characterstic for format:
* H5_ATTR_FORMAT(X,Y,Z)  __attribute__((format(X, Y, Z)))
- Rename UNUSED attribute characterstic to H5_ATTR_UNUSED.
- Rename NORETURN attribute characterstic to H5_ATTR_NORETURN

tested with h5committest.
2015-06-01 14:38:09 -05:00
HDF Tester
78c4a8f4c6 [svn-r27127] Snapshot version 1.9 release 220 2015-05-31 19:02:10 -05:00
Scot Breitenfeld
52e5579fba [svn-r27122] removed dependency on generatored fortran source code 2015-05-28 11:53:15 -05:00
Scot Breitenfeld
b1cf507c6d [svn-r27116] svn merge -r26937:27115 https://svn.hdfgroup.uiuc.edu/hdf5/trunk 2015-05-27 17:12:43 -05:00
Scot Breitenfeld
244784ab2c [svn-r27115] Moved testing KINDs and SIZEOFs to configure. 2015-05-27 17:07:18 -05:00
HDF Tester
965e459a98 [svn-r27110] Snapshot version 1.9 release 219 2015-05-24 18:59:54 -05:00
HDF Tester
ab80cbadfd [svn-r27092] Snapshot version 1.9 release 218 2015-05-17 18:59:27 -05:00
HDF Tester
39e0b31a24 [svn-r26997] Snapshot version 1.9 release 217 2015-05-03 06:06:41 -05:00
Dana Robinson
bfa5786184 [svn-r26986] Removed H5F_ACC_DEBUG and H5FD_DEBUG functionality.
The H5F_ACC_DEBUG symbol remains but has been defined to zero and
has been listed as deprecated.

Fixes: HDFFV-1074

Tested on:
    h5committest
    32-bit Linux w/ C++ and Fortran and multi VFD
    32-bit Linux w/ C++ and Fortran and multi VFD (no deprec symbols)
2015-04-30 14:32:25 -05:00
Albert Cheng
056ffa6341 [svn-r26963] HDFFV-9298: make uninstall generated "test: argument expected" lines
The error is that $EXAMPLETOPDIR is used without setting a value first.
Solution is to set them with the proper values.

Tested: jam only to confirm the error no longer exists.
2015-04-29 02:22:43 -05:00
Scot Breitenfeld
5e6d18e5be [svn-r26869] removed the --enable-fortran2003 option, it is now just --enable-fortran 2015-04-21 13:33:25 -05:00
Scot Breitenfeld
11b19627b9 [svn-r26867] svn merge -r26837:26866 https://svn.hdfgroup.uiuc.edu/hdf5/trunk 2015-04-21 11:57:33 -05:00
Larry Knox
cf98752566 [svn-r26840] configure
configure.ac
hl/src/H5LTparse.c
hl/src/H5LTparse.h
        Address HDFFV-9010: configure issue with gcc 4.9.2 "-l ".
        Change default to disable_shared on CYGWIN.

release_docs/INSTALL_Cygwin.txt
release_docs/RELEASE.txt
        Update for changed default and no CYGWIN szip binary.

c++/src/cpp_doc_config
bin/h5vers
        AddressHDFFV-9010: Add cpp_doc_config to h5vers

Tested with h5committest, on CYGWIN.
2015-04-17 17:24:47 -05:00
Scot Breitenfeld
0cc9b0c79f [svn-r26825] Added include for preprocessing fortran files with configure definitions 2015-04-16 13:36:34 -05:00
HDF Tester
27313306f8 [svn-r26785] Snapshot version 1.9 release 216 2015-04-12 06:05:35 -05:00
Binh-Minh Ribler
4275900a7b [svn-r26737] Purpose: Fix daily test failure
Description:
    - In DataType::DataType(const PredType& pred_type), using DataType::copy
    will invoke DataType::close() unnecessarily, which will produce undefined
    behavior.  Changed to call H5Tcopy directly, code reuse is not useful in
    this case.
    - Also, fixed CommonFG::childObjVersion to return expected value outside of
    an if/else block.
Platforms tested:
    Linux/ppc64 (ostrich)
    Linux/64 (platypus)
    Linux/32 2.6 (jam)
2015-04-06 12:46:54 -05:00
Larry Knox
3032f3adf3 [svn-r26711] Recommitting revisions 26669 and 26670, removing VPATH and redundant /usr/include and lib in fcompile and link flags checks, now that I have run reconfigure.
Also changed paths to h5cc, etc. in scripts to run installed examples from relative paths to absolute paths.

Tested with h5committest.
2015-04-02 16:07:53 -05:00
Binh-Minh Ribler
f6d9d1fdc8 [svn-r26695] Purpose: Fixed HDFFV-7947 (cont.)
Description:
    - Put back the UNUSED parameters in dsets test because the change to remove
      the warning last time caused failure in setting filter, in turn, caused
      failure in the test with such obscure/unrelated errors!
    - Added incRefCount() to other constructors that missed from last time.
Platforms tested:
    Linux/64 (platypus)
    Linux/32 2.6 (jam)
    SunOS 5.11 (emu)
2015-04-01 13:52:05 -05:00
Binh-Minh Ribler
ea029945f5 [svn-r26667] Purpose: Fixed HDFFV-8766
Description:
    Per user Jason Newton request, the following constructor is added:
        H5File(hid_t existing_id);
    Also, fixed H5File::openFile to close current file first before re-using
    the object.
Platforms tested:
    Linux/64 (platypus)
    Linux/32 2.6 (jam gnu and Intel 15.0)
    SunOS 5.11 (emu)
2015-03-30 16:57:37 -05:00
Allen Byrne
45577d5693 [svn-r26660] HDFFV-9131: autotols rework
Remove CXX_CONDITIONAL
remove unneeded/obsolete sections.

h5commtitest
2015-03-30 13:55:21 -05:00
Binh-Minh Ribler
98d1c2d9a9 [svn-r26655] Purpose: Fixed HDFFV-7947
Description:
    When copy constructor or constructor that takes an existing id is invoked,
    the C ref counter stays the same but there is an extra C++ object which
    later is destroyed and may cause the HDF5 id to be closed prematurely. The
    C++ library needs to increment the ref counter in these situations, so that
    the C library will not close the id when it is still being referenced.

    However, the incrementing of ref count left some objects opened at the end
    of the program, perhaps, due to compiler's optimization on cons/destructors.    The constructor, that takes an existing id, needs to increment the counter
    but it seems that the matching destructor wasn't invoked.  The workaround
    is to have a function for each class that has "id" that only sets the id
    and not increment the ref count for the library to use in these situations.
    These functions are "friend" and not public.

    The friend functions are:
        void f_Attribute_setId(Attribute *, hid_t)
        void f_DataSet_setId(DataSet *, hid_t)
        void f_DataSpace_setId(DataSpace *, hid_t)
        void f_DataType_setId(DataType *, hid_t)
Platforms tested:
    Linux/64 (platypus)
    Linux/32 2.6 (jam gnu and Intel 15.0)
    SunOS 5.11 (emu)
2015-03-30 12:58:44 -05:00
Binh-Minh Ribler
39fb0401a0 [svn-r26643] Purpose: Adding new wrappers (HDFFR-9167 partially)
Description:
    Added wrappers for C functions H5P[s/g]et_libver_bounds and wrappers
    for getting object header version

      // Sets bounds on versions of library format to be used when creating
      // or writing objects.
      void setLibverBounds(H5F_libver_t libver_low, H5F_libver_t libver_high) const;

      // Gets the current settings for the library version format bounds.
      void getLibverBounds(H5F_libver_t& libver_low, H5F_libver_t& libver_high) const;

      // Returns the object header version of an object in a file or group,
      // given the object's name.
      unsigned childObjVersion(const char* objname) const;
      unsigned childObjVersion(const H5std_string& objname) const;

Platforms tested:
    Linux/64 (platypus)
    Linux/32 2.6
    SunOS 5.11
2015-03-28 23:37:28 -05:00
Binh-Minh Ribler
72d896f709 [svn-r26640] Purpose: Fix bugs
Description:
    - Changed DataType::operator= to simply copy the id of rhs instead of
      calling H5Tcopy because, when the operator= is invoked, a different
      datatype id is created and it won't have the same characteristics as
      rhs', specifically, if the rhs represents a named datatype, "this"
      would still be a transient datatype.
    - Added a DataType constructor that takes a PredType object, and this
      constructor will cause H5Tcopy to generate another datatype id, from a
      predefined datatype.
    - Fixed various mistakes in tests.
Platforms tested:
    Linux/64 (platypus)
    Linux/32 2.6 (jam/gnu and jam/icc 15)
    SunOS 5.11 (emu development/production)
2015-03-27 23:15:43 -05:00
Allen Byrne
451a91e53b [svn-r26594] Merge macros and fortran changes from dual_binary feature.
Tested: local linux
2015-03-25 17:08:46 -05:00
Jerome Soumagne
1cd7c16a9d [svn-r26509] Run reconfigure after merges from autotools_rework branch. 2015-03-20 14:15:51 -05:00
Jerome Soumagne
8a1d1b24cf [svn-r26505] Merge r26435 from autotools_rework branch.
Remove DEFAULT_LIBS from configure.ac and irix6.x config file which
was using it.

Remove references to IRIX/irix* platform.
2015-03-20 14:04:30 -05:00
Binh-Minh Ribler
96c424d8bc [svn-r26462] Description:
Fixed typo that caused failure on Windows.
Platforms tested:
    Linux/32 2.6 (jam)
2015-03-16 18:23:16 -05:00
HDF Tester
ead7273c2c [svn-r26459] Snapshot version 1.9 release 215 2015-03-15 06:08:23 -05:00
Binh-Minh Ribler
3b90bca561 [svn-r26458] Purpose: Fix warnings HDFFV-8658
Description:
    Fixed many type conversion warnings and unused variables.
Platforms tested:
    Linux/64 (platypus)
    Linux/32 2.6 (jam)
    SunOS 5.11 (emu)
2015-03-15 01:49:20 -05:00
Binh-Minh Ribler
a382658282 [svn-r26457] Purpose: Fix warnings HDFFV-8658
Description:
    The following two constructors of classes: AbstractDs, IdComponent,
    H5Location, and H5Object are no longer appropriate after the data member
    "id" had been moved from IdComponent to the sub-classes.

    The copy constructors are noop and will be generated by the compilers if
    needed so they can be removed in 1.8.15 without effecting applications. The
    other constructors will be removed from 1.10 release, and then from 1.8 if
    their removal does not raise any problems in at least two 1.10 releases.

    <Classname>(const hid_t h5_id);
    <Classname>(const <Classname>& original);

    Deprecation warnings are added to each of these classes.

    The other classes are changed to call the default constructor instead of
    one of the constructors above.
Platforms tested:
    Linux/64 (platypus)
    Linux/32 2.6 (jam)
    SunOS 5.11 (emu)
2015-03-15 01:47:56 -05:00
Binh-Minh Ribler
66a7cc1289 [svn-r26456] Purpose: Fix warnings HDFFV-8658
Description:
    Fixed base classes that were in wrong order on the prototype lines and
    some misc. warnings.
Platforms tested:
    Linux/64 (platypus)
    Linux/32 2.6 (jam)
    SunOS 5.11 (emu)
2015-03-15 01:45:24 -05:00
Binh-Minh Ribler
f9fe5b4c32 [svn-r26455] Purpose: Fix warnings HDFFV-8658
Description:
    Parameter had the same name as the class' member's.  Replaced parameter
    with a different name.
Platforms tested:
    Linux/64 (platypus)
    Linux/32 2.6 (jam)
    SunOS 5.11 (emu)
2015-03-15 01:43:56 -05:00
Binh-Minh Ribler
447d7ebae9 [svn-r26454] Purpose: Fix warnings HDFFV-8658
Description:
    Missing initializing one of the base classes in multiple inheritance.
    Added CommonFG() to constructors' prototype.

Platforms tested:
    Linux/64 (platypus)
    Linux/32 2.6 (jam)
    SunOS 5.11 (emu)
2015-03-15 01:42:32 -05:00
Dana Robinson
7462a7ef1c [svn-r26329] Merge of r26069, r26070, and r26072 from the features/autotools_rework
branch.

Removed the configure option that allows selective disabling of individual
internal filters (fletcher32, shuffle, etc.).

This feature mucked up the code with a lot of #ifdefs, saved very little space,
and was not scalable to a general scheme for library size reduction. We've
decided to remove the feature while we investigate a more general scheme for
decreasing the library size.

Part of: HDFFV-9086

Tested on: h5committest
2015-02-27 07:50:38 -05:00
Mohamad Chaarawi
c4044e0c85 [svn-r26303] remove files with .clog2 extension generated by MPE when doing make clean. 2015-02-25 13:48:31 -05:00
Allen Byrne
73bb11dda3 [svn-r26208] Update cmake minimums 2015-02-18 11:56:22 -05:00
Scot Breitenfeld
b28b5fade9 [svn-r26188] Merged autotools fixes into the trunk:
HDFFV-9089, HDFFV-9091, HDFFV-9092, HDFFV-9094, HDFFV-9095
2015-02-16 12:17:49 -05:00
Mohamad Chaarawi
74fbb9e327 [svn-r26180] merge configure fixes for HDFFV-9068,9069,9096,9097,9135 from autotools_rework branch:
- Remove Infering parallel compilers (C and Fortran) from configure.ac
- Remove restriction to build shared with parallel
- Cleanup parallel sections in configure.ac
- remove large file support checks
- MPE fixes.

tested with h5committest.
2015-02-16 11:17:03 -05:00
HDF Tester
9a376e4ee9 [svn-r26177] Snapshot version 1.9 release 214 2015-02-15 06:13:34 -05:00
HDF Tester
f4a60fc34c [svn-r26146] Snapshot version 1.9 release 213 2015-02-08 06:05:07 -05:00
HDF Tester
67f41bf9f8 [svn-r26092] Snapshot version 1.9 release 212 2015-02-01 06:03:18 -05:00