Commit Graph

281 Commits

Author SHA1 Message Date
Allen Byrne
11b4c1f3af HDFFV-10632 update autotools test scripts to match cmake 2018-12-06 12:48:39 -06:00
Allen Byrne
eb1b3f42c4 HDFFV=10632 test cleanup 2018-12-06 07:54:19 -06:00
Allen Byrne
307749cc71 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '55e87e5b86aacbb37c57614cd2e869541291caad': (51 commits)
  Correct Windows build.
  Refactor allocating & releasing pass through wrapper objects.
  Fix typo
  Remove duplicated comment.
  Add a couple of missing prototypes for static routines, along with updating a comment from VOL plugin -> connector.
  Switch H5VL_class_value_t from unsigned to int, and add "invalid" ID value.
  Correct "make check-vol" regression test target.
  Switch H5VL_class_value_t from enum to unsigned integer
  Add support for "make check-vol", along with a few minor cleanups, etc.
  Refactor infrastructure for setting FAPL information from environment variables during testing, including connecting native, pass-through, and dynamically loaded VOL connectors.   Also bring native and pass-through VOL connectors into alignment, removing the "H5VLnative_private.h" header.
  Remove example VOL connector, since it's been superceded by the pass-through VOL connector in the src subdirectory.
  Add pass-through VOL connector
  Update API tracing info for VOL functions and regenerate trace macros for VOL API calls.
  Added 'notify' callback for async requests; switched VOL class and info comparison to return comparison value as parameter, so they can return error values; "cancelled" -> "canceled"; switched order of 'wrap_object' and 'free_wrap_ctx' management callbacks.
  Add using FAPL from h5_fileaccess() to more tests.
  Remove unused test for unimplemented routine.
  Switch loc_params to VOL callbacks to pass struct by pointer instead of by value.
  Add info_to_str and str_to_info "management" callbacks for serializing and deserializing a connector's info object.
  Revert some of the changes to support the original property list value of metadata read attempts.
  Add VOL connector info to the flie access property list returned from H5Fget_access_plist().  Also, other misc. cleanups, etc.
  ...
2018-12-05 14:25:58 -06:00
Allen Byrne
a68fd29208 Fix special macro stdout as empty 2018-12-05 09:44:13 -06:00
Allen Byrne
d6de299f01 Need nonexistent file to skip stdout compare 2018-12-04 23:16:03 -06:00
Allen Byrne
e3e24a2989 HDFFV-10632 - split stderr and stdout in cmake 2018-12-03 09:35:59 -06:00
Quincey Koziol
d0d360ff2d Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into stackable_vol 2018-11-18 00:39:27 -06:00
Songyu Lu
d25afb294c HDFFV-10601: Some compiler doesn't support clock_gettime(). So I changed to use gettimeofday (HDgettimeofday in the HDF5 library). 2018-11-16 12:06:30 -06:00
Ray Lu
e07d097da1 Merge pull request #1316 in HDFFV/hdf5 from ~SONGYULU/hdf5_ray:bugfix/HDFFV-10601-issues-with-chunk-cache-hash to develop
* commit 'cd13d24e5140578a880aebe4e2d8b899179d0870':
  HDFFV-10601: I added error checking to the HDF5 functions.
  HDFFV10601: Adding performance test to verify the improvement.
  HDFFV-10601: I changed to a better way to calculate the number of chunks in a dataset.
  HDFFV-10601 Issues with chunk cache hash value calcuation:
2018-11-15 09:43:46 -06:00
Songyu Lu
cd13d24e51 HDFFV-10601: I added error checking to the HDF5 functions. 2018-11-14 17:30:23 -06:00
Dana Robinson
3edd97731e Renamed h5repart's -family_to_sec2 to -family_to_single. 2018-11-14 13:37:31 -08:00
Songyu Lu
2fe10c647c HDFFV10601: Adding performance test to verify the improvement. 2018-11-13 11:37:29 -06:00
Quincey Koziol
e2ed2edf6e Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into stackable_vol 2018-11-12 16:23:54 -06:00
Quincey Koziol
17f9cb4158 Switch tool error output to match VOL changes within library 2018-11-12 12:14:25 -06:00
Allen Byrne
6b959b1e21 Fix target files for commands 2018-11-09 14:38:11 -06:00
Quincey Koziol
140f72b748 Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into stackable_vol 2018-11-07 15:20:28 -06:00
Allen Byrne
4616c1e863 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '1652a60fcbe9894d7c34a778fb24dce1979fb9a9':
  HDFFV-10605 Only test plugins if SHARED enabled
  Correct platforms
  Correct extlib depends
  Commit version changes for additional files for 1.11.3 snapshot release.
2018-11-06 16:01:35 -06:00
Allen Byrne
1652a60fcb Merge pull request #1319 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit '81cb24ac1db0f4936b19067cdb7fa4e14e0d00db':
  Commit version changes for additional files for 1.11.3 snapshot release.
2018-11-06 16:01:16 -06:00
Allen Byrne
79903575e6 HDFFV-10605 Only test plugins if SHARED enabled 2018-11-06 15:45:58 -06:00
Larry Knox
81cb24ac1d Commit version changes for additional files for 1.11.3 snapshot release. 2018-11-06 10:56:36 -06:00
Quincey Koziol
0df6e44a6e Squashed commit of private branch changes to support stackable VOL plugins.
modified:   test/dsets.c
2018-10-24 23:52:47 -05:00
Allen Byrne
ee54368066 TRILAB-82 fixed errors found in review 2018-10-24 14:55:16 -05:00
Allen Byrne
633b7f93ce TRILAB-81 coverity fixes 2018-10-17 10:57:56 -05:00
Dana Robinson
e962df1591 VOL FEATURE 2018-10-10 08:10:15 -07:00
Dana Robinson
8a4695ed59 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '2618dc314b9e4875e6ece7ee8696846ac2d02183':
  Remove extra unneeded
  Remove libsettings from pregenerated block
  CMake changes for SKIPPED and flush tests
  Correct $withval usage in configure
  HDFFV-10332 Adjust checks and generation of files
  HDFFV-10332 Use pre-generated files
2018-09-24 17:52:56 -05:00
Allen Byrne
8d7bdb7041 CMake changes for SKIPPED and flush tests 2018-09-24 14:38:46 -05:00
Dana Robinson
a56b4db4ae Remainder of vol_normalization changes (dataset, attribute, files, objects). 2018-09-24 12:23:41 -07:00
hdftest
e2f6e6f62f Snapshot version 1.11 release 2. 2018-09-20 14:54:10 -05:00
Dana Robinson
eb78fd8832 Develop normalization with vol_integration.
Mostly peripheral things like the tools and wrappers,
with just enough core library code to support that.
2018-09-18 22:57:37 -07:00
Dana Robinson
680cf4d946 Removed 'VOL' versions of FUNC_ENTER macros as well as empty functions
orginally intended to support the full SWMR feature.
2018-09-18 14:10:14 -07:00
Allen Byrne
27af9a7922 HD prefix and whitespace 2018-08-28 10:54:54 -05:00
Allen Byrne
14c060bbeb Add missing test option 2018-07-24 14:15:32 -05:00
Allen Byrne
b14c8bdb1c Add test file with unwritten datasets 2018-07-24 12:00:07 -05:00
Larry Knox
3c66549210 Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into develop 2018-07-18 17:06:59 -05:00
Larry Knox
892252106a Apply Cygwin pathches from Marco Atzeri.
Commit Joe Lee's typo corrections for src/H5MF.c.
2018-07-18 17:01:53 -05:00
Vailin Choi
92bf81a0fb Changes based on feedback from pull request. 2018-07-12 18:25:49 -05:00
Vailin Choi
d1f8ac3312 Modifications made based on feedback from pull request. 2018-07-11 16:02:51 -05:00
Vailin Choi
cf38292064 Fix for HDFFV-10333:
1) Check for valid object header version for a refcount messge
2) Check for invalid fill value size
3) Check for invalid dimension size in a layout message
4) Add --enable-error-stack option to h5stat
5) Add error checks to h5stat.c
6) Add tests to h5stat and h5dump
2018-07-10 22:00:14 -05:00
hdftest
b193bc11c9 Revert "Merge pull request #1116 in HDFFV/hdf5 from ~HDFTEST/hdf5_hft:hdf5_1_10 to develop"
This reverts commit e9f476dad4, reversing
changes made to 2ff00b1b93.
2018-06-24 18:04:23 -05:00
M. Scot Breitenfeld
f484649347 Merge branch 'develop' into hdf5_1_10.sync 2018-06-04 14:41:12 -05:00
Dana Robinson
dec2f588ac Merge pull request #1043 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:h5do_direct_chunk_hl_to_src to develop
* commit '1da9c5545c013ebc540ba3044810889d4acfa5be':
  Restored some unused #defines to the deprecated section of H5Dpublic.h.
  Added deprecated symbol wrappers for the H5DOwrite/read_chunk wrappers.
  Updated commenting in the H5DO compat test.
  Stripped out most of the duplicated functionality in the H5DO compat test.
  * Added H5DO compatibility functions. * Changed the offset copy to use an array on the stack. * Yanked some unused #defines.
  * Fixed the error tests * Moved common functionality into helper functions
  Normalize with trunk prior to update merge
  Fixed a warning.
  Finished move of H5DOread/write_chunk calls to H5D.
  First stage of moving H5DOread/write_chunk() to src/ and making them H5D calls. * Moved H5DOread/write_chunk() to H5Dio.c and renamed to H5D*. * Moved the hl/test/test_dset_opt test to test/ and renamed to   direct_chunk. * Moved the hl/test/dectris_hl_perf test to tools/test/perform   and renamed to direct_write_perf. * Updated autotools and CMake files.
2018-05-31 18:14:24 -05:00
M. Scot Breitenfeld
4ddd7704b6 Merge branch 'develop' into hdf5_1_10.sync 2018-05-22 11:48:44 -05:00
Dana Robinson
0e584c7af2 Merge branch 'develop' into h5do_direct_chunk_hl_to_src 2018-05-14 17:45:23 -07:00
M. Scot Breitenfeld
88e0c3e748 Merge branch 'develop' into hdf5_1_10.sync 2018-05-10 09:06:35 -05:00
Allen Byrne
37c27afde0 Fix MPI on Windows by adding MPI include folder 2018-05-09 14:29:44 -05:00
M. Scot Breitenfeld
b69bd0771e Merge branch 'develop' into hdf5_1_10.sync 2018-05-08 17:17:45 -05:00
Dana Robinson
64e13ca220 Merge branch 'develop' into h5do_direct_chunk_hl_to_src 2018-04-30 15:22:09 -07:00
Allen Byrne
fde2d1fe4a Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '1f8cb03e11a46f853881f45dac18eff2dd68401e':
  Fix errors in Makefile.am files that cause "make check" to repeat test, even when there are no changes to source files.  (Also add a ggenerated script to the list of files cleaned up on 'make distclean')
  Further minor cleanups
  Checkpoint normalization against incoming hyperslab / selection / dataspace improvements.
2018-04-30 11:05:26 -05:00
Dana Robinson
09b1106e39 First stage of moving H5DOread/write_chunk() to src/ and making
them H5D calls.
* Moved H5DOread/write_chunk() to H5Dio.c and renamed to H5D*.
* Moved the hl/test/test_dset_opt test to test/ and renamed to
  direct_chunk.
* Moved the hl/test/dectris_hl_perf test to tools/test/perform
  and renamed to direct_write_perf.
* Updated autotools and CMake files.
2018-04-30 07:52:07 -07:00
Quincey Koziol
83e2ea681d Fix errors in Makefile.am files that cause "make check" to repeat test, even
when there are no changes to source files.  (Also add a ggenerated script
to the list of files cleaned up on 'make distclean')
2018-04-28 21:38:49 -05:00