Commit Graph

236 Commits

Author SHA1 Message Date
Scot Breitenfeld
5e6d18e5be [svn-r26869] removed the --enable-fortran2003 option, it is now just --enable-fortran 2015-04-21 13:33:25 -05:00
Scot Breitenfeld
0cc9b0c79f [svn-r26825] Added include for preprocessing fortran files with configure definitions 2015-04-16 13:36:34 -05:00
Larry Knox
3032f3adf3 [svn-r26711] Recommitting revisions 26669 and 26670, removing VPATH and redundant /usr/include and lib in fcompile and link flags checks, now that I have run reconfigure.
Also changed paths to h5cc, etc. in scripts to run installed examples from relative paths to absolute paths.

Tested with h5committest.
2015-04-02 16:07:53 -05:00
Allen Byrne
45577d5693 [svn-r26660] HDFFV-9131: autotols rework
Remove CXX_CONDITIONAL
remove unneeded/obsolete sections.

h5commtitest
2015-03-30 13:55:21 -05:00
Allen Byrne
451a91e53b [svn-r26594] Merge macros and fortran changes from dual_binary feature.
Tested: local linux
2015-03-25 17:08:46 -05:00
Jerome Soumagne
1cd7c16a9d [svn-r26509] Run reconfigure after merges from autotools_rework branch. 2015-03-20 14:15:51 -05:00
Dana Robinson
7462a7ef1c [svn-r26329] Merge of r26069, r26070, and r26072 from the features/autotools_rework
branch.

Removed the configure option that allows selective disabling of individual
internal filters (fletcher32, shuffle, etc.).

This feature mucked up the code with a lot of #ifdefs, saved very little space,
and was not scalable to a general scheme for library size reduction. We've
decided to remove the feature while we investigate a more general scheme for
decreasing the library size.

Part of: HDFFV-9086

Tested on: h5committest
2015-02-27 07:50:38 -05:00
Mohamad Chaarawi
c4044e0c85 [svn-r26303] remove files with .clog2 extension generated by MPE when doing make clean. 2015-02-25 13:48:31 -05:00
Allen Byrne
73bb11dda3 [svn-r26208] Update cmake minimums 2015-02-18 11:56:22 -05:00
Scot Breitenfeld
b28b5fade9 [svn-r26188] Merged autotools fixes into the trunk:
HDFFV-9089, HDFFV-9091, HDFFV-9092, HDFFV-9094, HDFFV-9095
2015-02-16 12:17:49 -05:00
Mohamad Chaarawi
74fbb9e327 [svn-r26180] merge configure fixes for HDFFV-9068,9069,9096,9097,9135 from autotools_rework branch:
- Remove Infering parallel compilers (C and Fortran) from configure.ac
- Remove restriction to build shared with parallel
- Cleanup parallel sections in configure.ac
- remove large file support checks
- MPE fixes.

tested with h5committest.
2015-02-16 11:17:03 -05:00
Mohamad Chaarawi
06ef71a37f [svn-r25397] - remove configure checks for MPI_File_get_size and Big
MPI_File_set_size as they are supported by most MPI implementations.
- fix bug in t_mpi.c (HDFFV-8856)
2014-07-07 13:22:48 -05:00
Larry Knox
c6e3e68297 [svn-r25117] Removed LT_ADD_LIBHDF5_DEPENDENCY configure conditional to roll back fix for removing rpaths from l
ib files.  The fix also removed dependencies on libhdf5, etc. when the --disable-sharedlib-rpath co
nfigure option was invoked.
Added instead configure variable hardcode_into_lib=no.  This removes rpath from lib files on Linux
and solaris machines.

Tested with h5committest on jam, koala, ostrich and platypus (cmake), and with configure option --disable-sharedlib-rpath on emu, platypus and quail.
2014-04-25 16:59:53 -05:00
Dana Robinson
7309bb5ab8 [svn-r25113] Fixed Subversion EOL and executable attributes. No code changes. 2014-04-25 16:27:37 -05:00
Larry Knox
f32690b53c [svn-r24997] Added compiler versions for mpich to settings file and configure summary.
For make installcheck, compile and run installed examples using the installed scripts.  They were being compiled but not run.
Add Fortran2003 examples to the run-ex-fortran script when fortran2003 is enabled.
Set flag to -O3 in production mode for Intel compilers other than those with specified other settings.
Gentoo patches:
    Remove unnecessary setting of LD_LIBRARY_PATH from configure.
    Prevent potential array subscript out of bounds error in perform/pio_engine.c and sio_engine.c.

Tested with h5committest on jam, koala, ostrich and platypus, on emu and kite, and parallel tests on jam, koala and platypus with mpich built with gnu 4.8.2 and with intel compilers.
2014-04-08 23:55:49 -05:00
Elena Pourmal
70daa61a87 [svn-r24967] Maintenance: Reorganized and cleaned the code to remove compiler warnings in the Fortran test code
and examples. 

Platforms tested: Manual testing in place and using srcdir on jam, platypus, and emu with default and 
                  PGI, Intel and new GNU compilers. ifort compiler was also tested with -i8 and -r8 flags
                  on jam.  CMake tested on jam.
2014-04-06 10:56:21 -05:00
Allen Byrne
98bbf4a36a [svn-r24948] Group tests by Common name
Remove WIN32 AND NOT CYGWIN if blocks - should be just WIN32

Tested: local linux CMake
2014-04-02 13:35:01 -05:00
Allen Byrne
c6fe8c70b2 [svn-r24932] HDFFV-8290: Remove unnecessary $(srcdir) and use AM_CPPFLAGS instead of INCLUDES. Update automake to 1.14.1
h5committest
2014-03-31 12:07:05 -05:00
Quincey Koziol
2e4302818a [svn-r24864] Description:
Remove all traces of MPI-POSIX VFD and GPFS detection/code.

    Remove remaining traces of stream VFD.

    Remove testpar/t_posix_compliant test (it's not actually verifying anything).

    Clean up H5D__mpio_opt_possible() further.

    Moved environment variable that disables MPI collective operations into
MPI-IO VFD (instead of it being in src/H5S.c).

    A few other small code cleanups.

Tested on:
    Mac OSX/64 10.9.2 (amazon) w/parallel & serial
2014-03-21 18:02:24 -05:00
Allen Byrne
f5689224b5 [svn-r24789] Bump up the minimum cmake version 2014-03-13 10:05:09 -05:00
Allen Byrne
6c5e74942d [svn-r24782] HDFFV-8700 -
KitWare recommendations: Change CMake commands to lower case.
2014-03-11 17:07:13 -05:00
Allen Byrne
a3292a77ce [svn-r24781] HDFFV-8700 -
KitWare recommendations: Change CMake commands to lower case.
Remove INCLUDE_DIRECTORIES in src for target level includes.
Change ADD_DEFINITIONS package debug defines into CMake option.
Remove -DNDEBUG
2014-03-11 16:14:57 -05:00
Allen Byrne
819b8099e2 [svn-r24392] Cleanup testfiles from scripts. Update lists of files to be cleaned. CMake update to clean testfiles.
Tested: local cmake, autools, and h5committest
2013-11-01 16:15:37 -05:00
Larry Knox
ab239810e1 [svn-r24194] Don't add hdf5 library dependencies to lib files when --disable-sharedlib-rpath configure option is invoked. Fix for HDFFV-8276.
Tested with h5committest and on hdf-duck.
2013-09-23 20:14:24 -05:00
Allen Byrne
c502d81a8c [svn-r24029] Move TESTS to seperate file to allow easier editing by all developers.
Tested: local linux
2013-08-19 16:49:44 -05:00
Allen Byrne
feb14ea872 [svn-r23745] HDFFV-8461: Add Windows /MT support
This adds the UserMacros.cmake support needed.
2013-06-10 12:46:48 -05:00
Allen Byrne
aff5c20a6a [svn-r23305] HDFFV-8257: szip still used even if headers are not found. Change configure to test the result of the CHECK HEADERS call before checking for the library.
Tested: local linux, h5committest
2013-02-18 15:56:21 -05:00
Scot Breitenfeld
a976ca99a9 [svn-r23293] Fix for HDFFV-8268: Fortran wrapper for H5Fget_file_image function.
Tested: (jam, gnu,intel compilers)
2013-02-17 21:01:18 -05:00
Allen Byrne
2fba171a67 [svn-r23160] HDFFV-8227: Mac DARWIN requires CMake 2.8.10 2013-01-14 13:35:30 -05:00
Dana Robinson
7b5b6d239e [svn-r23111] Purpose:
Fixes for HDF5 1.8.10 p1

HDFFV-7975
Changed the max single I/O operation size on Darwin/Mac OS X.

HDFFV-8124 and HDFFV-8158
Fixed a core VFD bug when large blocks of data are read.

HDFFV-8246
Added more fields to the VFD read/write error messages.

Tested on:
64-bit Windows 7, Visual Studio 2010, CMake
64-bit Mac OS X Snow Leopard (Fred), Fortran, C++
64-bit BE Linux (Ostrich), Fortran, C++
32-bit LE Linux (jam), Fortran, C++ (also parallel w/ Fortran)
2012-12-19 16:51:55 -05:00
Scot Breitenfeld
a692fe88cd [svn-r23105] Changed Fortran examples to reflect tutorial examples via Barbara;
added: h5_cmprss.f90

Tested: jam (gnu compilers)
2012-12-15 17:59:00 -05:00
Scot Breitenfeld
8dc9f39570 [svn-r23093] Fixed API to be 1.6 compliant, removed deprecated APIs
Checked: jam (gnu, mpi) --disable-deprecated-symbols, --with-default-api-version=v16
2012-12-12 09:56:39 -05:00
Scot Breitenfeld
e92f4b1a7c [svn-r23092] Cleaned-up printed output and corrected output comments
Tested: jam (gnu)
2012-12-11 23:30:22 -05:00
Scot Breitenfeld
3079b8dde8 [svn-r23090] Fixed H5Dread input parameters.
Tested: gnu (jam)
2012-12-11 08:39:39 -05:00
Scot Breitenfeld
02fb07aa85 [svn-r23089] Changed Fortran examples to reflect changes in documentation via Barbara;
mainly program name changes. Two new examples added: h5_extend.f90 h5_subset.f90 and
example fileexample.f90 was removed.

Tested: jam (gnu compilers)
2012-12-10 17:41:13 -05:00
Scot Breitenfeld
17fd0e9ce4 [svn-r23088] Changed Fortran examples to reflect changes in documentation via Barbara;
mainly program name changes. Two new examples added: h5_extend.f90 h5_subset.f90 and
example fileexample.f90 was removed.

Tested: jam (gnu compilers)
2012-12-10 17:30:38 -05:00
Allen Byrne
5697dc8f80 [svn-r23066] HDFFV-8265: create .def file during configure, added F2003 optional functions and refactor ISO_C_BINDING usage in cmake files
Tested: local cmake
2012-11-29 09:50:21 -05:00
Allen Byrne
e5d4ba944f [svn-r23053] Remove deleted file from CMake build list 2012-11-26 08:56:29 -05:00
Scot Breitenfeld
e53f4cce8a [svn-r23052] Description:
Removed example grpit.f90 which used undocumented/obsolete APIs, The equivalent and up-to-date example
to transverse through a file would be the example h5ex_g_traverse_F03.f90 in hdf5-examples.
2012-11-25 22:08:02 -05:00
Larry Knox
33504deb83 [svn-r22908] Reverted changes in revision 22819
Tested with h5committest on jam, koala and ostrich.
2012-10-16 16:38:58 -05:00
Scot Breitenfeld
393852a414 [svn-r22826] Fix for: HDFFV-7903 Fortran problem writing control character to a dataset
reconfigured
2012-09-27 14:21:45 -05:00
Scot Breitenfeld
32a131ea70 [svn-r22825] Fix for: HDFFV-7903 Fortran problem writing control character to a dataset
Tested: (jam, gfortran)
2012-09-27 14:20:09 -05:00
Larry Knox
c5371d7618 [svn-r22819] Added H5BLD_STATIC and HDF5_USE_SHLIB to configure.ac so that if configured with --disable-static the default for HDF5_USE_SHLIB in the compile scripts will be changed to yes. This is a fix for HDFFV-8141, where the compile scripts try to link to non-existant static hdf5 libraries.
Tested on jam,koala,ostrich(h5committest) and other THG machines.
2012-09-26 23:49:19 -05:00
Allen Byrne
5d88bae6df [svn-r22714] one more missed VAR change for parallel examples 2012-08-26 14:10:01 -05:00
Allen Byrne
1f8fb63581 [svn-r22709] HDFFV-8129: reconfigured on jam, Remove overloading of autotools TESTS var, rename configure.in to configure.ac, convert test scripts from hard *.sh to configure managed *sh.in files.
Tested: h5committest
2012-08-23 11:07:43 -05:00
Larry Knox
edf83e5d1f [svn-r22706] Updated autotools: autoconf 2.69, automake 1.12.3, m4 1.4.16, libtool 2.4.2
Tested THG machines.
2012-08-22 00:00:32 -05:00
Larry Knox
f4990be635 [svn-r22426] Add examples/README file to be installed with examples.
Text file only, but tested with h5committest.
2012-06-02 13:54:58 -05:00
Dana Robinson
f1df456412 [svn-r22170] Removed extraneous svn executable properties from non-executable files. 2012-03-28 14:30:59 -05:00
Allen Byrne
cc3eb8da73 [svn-r21804] Update CMake Required version in all folders to match current standard 2.8.6 2011-12-05 11:19:09 -05:00
Allen Byrne
4c5c484b99 [svn-r21715] Correct SET_TARGET_PROPERTIES commands 2011-11-04 12:31:32 -05:00