Commit Graph

112 Commits

Author SHA1 Message Date
bmribler
0d595d68ca
Update link to Chunking in HDF5 page (#4203) 2024-03-21 09:10:40 -07:00
Allen Byrne
8ecc984fff
Correct download link for develop doxygen (#4196) 2024-03-20 16:45:46 -05:00
Allen Byrne
8f3e544193
Filter plugins updates for registration URL (#4180)
* Update filter plugin URL to new location

* Adjust test array size
2024-03-19 15:11:15 -05:00
jhendersonHDF
330b80a266
Add support for _Float16 16-bit floating point type (#4065)
Fixed some conversion issues with Clang due to problematic undefined
behavior when casting a negative floating-point value to an integer

Fixed a bug in the library's software integer to floating-point
conversion function where a user's conversion exception function
returning H5T_CONV_UNHANDLED in the case of overflows would result in
incorrect data after conversion

Added configure checks for functions and macros related to _Float16
usage since some compilers expose the datatype but not the functions or
macros

Fixed a dt_arith test failure when H5_WANT_DCONV_EXCEPTION isn't defined

Fixed a few warnings from not explicitly casting some _Float16 variables
upwards
2024-03-18 21:36:46 -07:00
Allen Byrne
4e222bf5bb
Add filter plugin user guide text. Fix registered URL in docs (#4169) 2024-03-18 08:36:55 -07:00
Scot Breitenfeld
9d8e882496
Added new H5E with tests. (#4049)
Added Fortran H5E APIs:
h5eregister_class_f, h5eunregister_class_f, h5ecreate_msg_f, h5eclose_msg_f
h5eget_msg_f, h5epush_f, h5eget_num_f, h5ewalk_f, h5eget_class_name_f,
h5eappend_stack_f, h5eget_current_stack_f, h5eset_current_stack_f, h5ecreate_stack_f,
h5eclose_stack_f, h5epop_f, h5eprint_f (C h5eprint v2 signature)

Addresses Issue #3987
2024-03-07 03:34:55 -08:00
mattjala
d1ed02d49f
Clarify vlen string datatype message (#3950) 2024-01-31 16:16:49 -06:00
Allen Byrne
365e23340c
Fix doxygen errors (#3962)
* Switch warnings as errors to default OFF

* Enable mac docs

* Add doxygen action uses step

* Use html div around snippet

* Allow preset name to be an argument to cmake-ctest.yml
2024-01-29 07:38:54 -06:00
mattjala
51f150a945
Update H5Fget_obj_count/ids docs to reflect dtype behavior (#3932)
* Update H5Fget_obj_count/ids to reflect dtype behavior

* Clarify comments on H5Fget_obj_ids
2024-01-19 21:11:06 -06:00
H. Joe Lee
11e15aeed1
Change Trouble Shooting to Troubleshooting (#3905) 2023-12-22 09:02:09 -08:00
H. Joe Lee
2149744b35
Move Glossary to the end of docs navigation menu (#3902) 2023-12-21 10:01:33 -06:00
Allen Byrne
aa734a5d7e
Add VDS examples and fix non-standalone build (#3898)
* Choose a size for rdata dimension

* Fix platform naming conflicts

* Fix doxygen references to point within library repo
2023-12-21 09:53:24 -06:00
H. Joe Lee
d5edbee016
Add period(.) at the end of the sentence for consistency. (#3897) 2023-12-19 08:37:48 -06:00
Allen Byrne
6f2d22d86e
Add variable option syncing for examples (#3885) 2023-12-14 12:50:30 -06:00
Allen Byrne
fc88fcde10
Develop merge examples (#3851)
* Merge examples repo into library

* Change grepTest to be more fault-tolerant

* Update examples macro file

* Exclude all Fortran examples from doxygen
2023-11-27 15:30:15 -06:00
Allen Byrne
ef39882fa1
Change dest for doxygen (#3856)
* Switch doxygen refs to hdf5/develop
2023-11-15 17:32:07 -06:00
Allen Byrne
61982b60fd
Update some doxygen links to local refs (#3814) 2023-11-02 07:55:50 -05:00
Allen Byrne
66396cadb1
Fix windows cpack error in WiX package. (#3747) 2023-10-23 12:39:43 -07:00
Neil Fortner
630d6e27c9
Add new API function H5Pget_actual_select_io_mode() (#2974)
This function allows the user to determine if the library performed selection I/O, vector I/O, or scalar (legacy) I/O during the last HDF5 operation performed with the provided DXPL. Expanded existing tests to check this functionality.
2023-10-20 10:32:17 -07:00
Allen Byrne
5844f498b0
Add an option to disable doxygen warn as error (#3708)
Add for both CMake and the Autotools

* HDF5_ENABLE_DOXY_WARNINGS: ON/OFF (Default: ON)
* --enable-doxygen-errors: enable/disable (Default: enable)

The default will fail compile if the doxygen parsing generates warnings.
The option can be disabled if certain versions of doxygen have parsing
issues. i.e. 1.9.5, 1.9.8.

Fixes #3398
2023-10-19 14:58:33 -07:00
jhendersonHDF
9557256819
Sync changes that are only in 1.14 branch (#3704) 2023-10-17 21:54:40 -07:00
jhendersonHDF
34fcb9c5a4
Fix several spelling/grammar issues (#3621) 2023-10-03 09:01:28 -07:00
Allen Byrne
197596b085
Some minor formatting and text changes (#3563) 2023-09-22 08:44:31 -05:00
H. Joe Lee
fd630b3dff
Fix broken URL. (#3546) 2023-09-19 11:09:58 -05:00
Allen Byrne
f2a284dc80
Add API examples doxygen page (#3500) 2023-09-14 07:40:28 -07:00
Allen Byrne
fbeddf2c9c
Add missing row for the ROS3 VFD in table #3415 (#3517) 2023-09-11 05:48:13 -07:00
Allen Byrne
6e0e53039a
Fix the Fortran extension used in example links (#3430) 2023-08-25 09:16:27 -05:00
Allen Byrne
1e75fafe1f
Add parallel examples in doxygen (#3413) 2023-08-24 12:29:05 -05:00
Scot Breitenfeld
1706355ee1
removed the use of encoded single apostrophe (#3261)
* removed the use of encoded single apostrophe, and fix H5Dread_chunk from write to read

* updated sanitizer paragraph
* fixed brief description for H5Fget_info
2023-07-20 09:01:58 -05:00
Allen Byrne
9b5d742529
Replace 1_10 reference with develop branch (#3227) 2023-07-13 12:17:18 -05:00
H. Joe Lee
e03f1951c9
docs: remove redundancy in Data Transfer section of user guide (#3208) 2023-06-29 08:25:05 -05:00
Dana Robinson
aebac33a1f
Remove HD from memory allocate/free calls (#3195)
* HDcalloc
* HDfree
* HDmalloc
* HDrealloc
2023-06-28 15:48:12 -07:00
Sean McBride
65d8c93470
Many fixes to various compiler warnings (#3124)
* Fixed various -Wmissing-variable-declarations by adding static keyword
* In a few cases, renamed the variable suffix from _g to _s.
* Fixed some -Wmissing-variable-declarations by using different declaration macros
* Fixed various -Wconditional-uninitialized warnings by just initializing variable to zero
* Fixed various -Wcomma warnings
* Fixed clang -Wstrict-prototypes warnings
* Fixed various -Wunused-variable warnings
* Updated some casts to fix the only 3 -Wcast-qual warnings
* Fixed the only -Wsometimes-uninitialized warning
2023-06-18 22:13:38 -07:00
H. Joe Lee
fcadfca992
Add Python for HDF-EOS zoo description (#3129) 2023-06-14 19:03:26 -07:00
bmribler
a64d3a989a
Fixed typo: hdf5-examples should be hdf5_examples in a link (#3101) 2023-06-11 07:08:39 -07:00
Lori Cooper
ee84868c56
Added new HDF5 logo and minor text and link changes to README.md (#3085) 2023-06-08 12:57:18 -07:00
Allen Byrne
d6059b9d75
Fix doxygen comments in structure and enable FAIL_ON_WARNINGS (#3059) 2023-06-06 14:43:09 -05:00
Allen Byrne
00e6c2d221
Remove most unused options which are defaulted #2998 (#3019)
* Remove most unused options which are defaulted #2998

* Fix property list references
2023-05-26 09:19:32 -07:00
Scot Breitenfeld
e08c822c6f
Fixed Fortran Doxygen warnings (#3017)
Fixes Fortran doxygen warnings, #2998
2023-05-26 06:29:38 -07:00
Dana Robinson
5c2e434dc6
Fix 'datatype' misspellings ('dataype') (#2984) 2023-05-19 09:05:23 -07:00
Allen Byrne
1054efdaf8
Add missing terminator (#2888) 2023-05-03 14:09:26 -07:00
Allen Byrne
571990d5c4
Changes to isolate API Test option files and use fetchcontent (#2880) 2023-05-03 11:45:16 -05:00
Scot Breitenfeld
a0340338e5
Add Fortran Selection IO APIs (#2864)
new selection IO fortran APIs with tests
2023-05-01 15:21:47 -07:00
Dana Robinson
265494b5b9
Remove "the the" from comments and docs (#2865) 2023-05-01 09:06:39 -07:00
Neil Fortner
3236fb79ce
Implement selection I/O with type conversion (#2823)
Initial implementation of selection I/O with type conversion.  Allows
Parallel collective I/O with type conversion, as long as selection I/O
is enabled.
2023-04-28 16:58:25 -07:00
Scot Breitenfeld
def21b1e33
Added Fortran Async APIs (#2715)
H5A, H5D, H5ES, H5G, H5F, H5L and H5O async APIs were added.
2023-04-21 11:07:48 -05:00
Scot Breitenfeld
d2345e9f0c
Addressed various Doxygen grammar issues. (#2524)
* reviewed H5A

* Addressed various grammar issues.

* remove double words, spelling fixes

* replace the use of rawdata with raw data
2023-03-13 11:53:08 -05:00
mattjala
4b7bdfec69
Update ReferenceManual.dox (#2517) 2023-03-08 15:08:04 -06:00
Mark Kittisopikul
04682f2788
Fix H5Dchunk_iter doxygen example, cherry-pick of ef3bed6 (#2519) 2023-03-08 15:06:17 -06:00
Mark Kittisopikul
5d3d43b1ee
Fix new codespell issues (#2521)
* Fix new codespell issues

* Have codespell ignore ./config/sanitizer/sanitizers.cmake
2023-03-08 14:42:47 -06:00