mirror/hdf5
2
0
Fork 0
mirror of https://github.com/HDFGroup/hdf5.git synced 2024-11-27 02:10:55 +08:00
Code Issues Packages Projects Releases Wiki Activity
20,724 Commits 89 Branches 144 Tags 733 MiB
0a581b0ac0
Commit Graph

20724 Commits

This Branch
This Branch
All Branches
Author SHA1 Message Date
Scot Breitenfeld
0a581b0ac0 Merge pull request #2414 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to develop 
* commit 'dde7e73d9fe8cc3b849767790aa9b13ee2d600cd':
  Fixed issue building HDF5 with NAG Fortran 7.0.
 2020-02-27 16:23:06 -06:00
Allen Byrne
a8755bfe2b Merge pull request #2412 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '6686cac564f5d0015a32b92e4478002069c973ee':
  Add java version and reference libsettings
 2020-02-27 14:55:48 -06:00
M. Scot Breitenfeld
dde7e73d9f Fixed issue building HDF5 with NAG Fortran 7.0. 
Accounted for the additon of half precision floating-point with a KIND=16.

HDFFV-11033
 2020-02-27 12:19:29 -06:00
Allen Byrne
6686cac564 Add java version and reference libsettings 2020-02-27 10:51:13 -06:00
Allen Byrne
9a0e84fb47 Merge pull request #2409 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '13f5b3aee20d1d65f56dc08f088e0f218da5cf37':
  Update examples and fix old version references.
  Move MODEL check to before usage in CTestScript.cmake.
 2020-02-27 08:56:44 -06:00
Allen Byrne
13f5b3aee2 Update examples and fix old version references. 2020-02-26 13:54:34 -06:00
Allen Byrne
f53220dc20 Move MODEL check to before usage in CTestScript.cmake. 2020-02-26 09:50:38 -06:00
Allen Byrne
1775d6c9bc Merge pull request #2405 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '2af8a87af0d7a1589a4df22d16b2d2513876e7a9':
  Copy generated files instead creating twice
  Fix standalone link
 2020-02-25 16:28:11 -06:00
Allen Byrne
2af8a87af0 Copy generated files instead creating twice 2020-02-25 16:04:56 -06:00
Allen Byrne
4906d3d6a8 Fix standalone link 2020-02-25 14:57:14 -06:00
Allen Byrne
ddb95a6dc5 Merge pull request #2398 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '04e67af8f968b2c6f50cb42990d3dfa79aa353d9':
  Fix Fortran macro use and jni comment
 2020-02-25 09:40:07 -06:00
Allen Byrne
04e67af8f9 Fix Fortran macro use and jni comment 2020-02-25 09:22:19 -06:00
Allen Byrne
fe7c3fb646 Merge pull request #2394 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit 'cf58730177d60fd7311582a29539d87f10a7d88e':
  Update Windows platforms
  HDFFV-11036 add release note
  HDFFV-11036 add file compare test process
  Correct usage of add_compile_definitions
 2020-02-24 13:59:40 -06:00
Allen Byrne
cf58730177 Update Windows platforms 2020-02-24 13:54:00 -06:00
Allen Byrne
1885c3e7d7 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit 'd24afb233383aa6c945fad430eb1b66edc4d6c63':
  Add missing MANIFEST entry, ./doc/code-conventions.md .
 2020-02-24 13:00:25 -06:00
Allen Byrne
4fcd2589bb HDFFV-11036 add release note 2020-02-24 12:49:56 -06:00
Allen Byrne
f7212df030 HDFFV-11036 add file compare test process 2020-02-24 12:45:22 -06:00
David Young
d24afb2333 Merge pull request #2385 in HDFFV/hdf5 from manifest-repair to develop 
* commit '921278c604b3129c1ff5066f0a2b94abcb3aa8f7':
  Add missing MANIFEST entry, ./doc/code-conventions.md .
 2020-02-24 10:49:09 -06:00
Allen Byrne
1773b327fb Correct usage of add_compile_definitions 2020-02-23 16:22:31 -06:00
Larry Knox
2129aa4c24 Merge pull request #2390 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '666205a55f01698a71484f504bc8eb9541800f25':
  TRILAB-142 Change minimum CMake version to 3.12
 2020-02-21 23:19:57 -06:00
Allen Byrne
666205a55f TRILAB-142 Change minimum CMake version to 3.12 2020-02-21 16:16:06 -06:00
Allen Byrne
909f9ee6d0 Merge pull request #2388 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '380fe7cfdfd98461cb1bff54bad4de0ee9904ad6':
  Fix always true issue because member is not dynamically allocated
  CMake cleanup
  HDFFV-11032 fix JNI call
 2020-02-21 16:05:51 -06:00
Allen Byrne
380fe7cfdf Fix always true issue because member is not dynamically allocated 2020-02-21 15:15:34 -06:00
Allen Byrne
3f3e1520d5 CMake cleanup 2020-02-21 15:14:42 -06:00
Allen Byrne
399ef726f0 HDFFV-11032 fix JNI call 2020-02-21 15:14:00 -06:00
Jordan Henderson
0175224cb8 Merge pull request #1988 in HDFFV/hdf5 from ~JHENDERSON/hdf5_pr:develop to develop 
* commit '51b8c63864c72de9a7b40c00673fe07510fec27e':
  Partial fix for HDFFV-10792
 2020-02-21 14:36:43 -06:00
Jordan Henderson
51b8c63864 Merge develop 2020-02-21 14:30:34 -06:00
David Young
c5ab228563 Merge pull request #2384 in HDFFV/hdf5 from h5f_decode_length to develop 
* commit '158ba17be0ad40e3e47a951c1340710608347772':
  Replace the old H5F_DECODE_LENGTH() implementation with one that initializes the variable it's loading on every path.
 2020-02-20 14:37:35 -06:00
David Young
921278c604 Add missing MANIFEST entry, ./doc/code-conventions.md . 2020-02-20 13:34:33 -06:00
David Young
158ba17be0 Replace the old H5F_DECODE_LENGTH() implementation with one that 
initializes the variable it's loading on every path.
 2020-02-19 13:18:48 -06:00
Scot Breitenfeld
97fb53cfea Merge pull request #2379 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to develop 
* commit 'def3f1a12e7c2ec165f40b9839f6bfe3da59807b':
  Corrected INTERFACE INTENT(IN) to INTENT(OUT) for buf_size inh5fget_file_image_f.
 2020-02-19 12:33:31 -06:00
David Young
7b4131c2ae Merge pull request #2367 in HDFFV/hdf5 from ~DYOUNG/werror:unused to develop 
* commit '50aac126d7c4082c2aeb0f3a68cad26bd1cd9783':
  Start to document the function/parameter/variable attribute macros.
  Filter all of the new _USED / _UNUSED type modifiers.
  H5_HAVE_PARALLEL, _DEBUG_API, etc.  Add attributes to some variables and parameters that are unused under some configurations.
 2020-02-19 09:38:02 -06:00
M. Scot Breitenfeld
def3f1a12e Corrected INTERFACE INTENT(IN) to INTENT(OUT) for buf_size inh5fget_file_image_f. 
HDFFV-11029
 2020-02-18 17:26:42 -06:00
David Young
50aac126d7 Start to document the function/parameter/variable attribute macros. 2020-02-18 17:07:40 -06:00
David Young
ac7cd484d8 Filter all of the new _USED / _UNUSED type modifiers. 2020-02-18 16:31:35 -06:00
David Young
47b79b7422 Merge pull request #2369 in HDFFV/hdf5 from ~DYOUNG/vs2010:develop to develop 
Merged per discussion with Elena.

* commit 'b4697f969295245840350e17d75d92a0fdd7e7a9':
  Use HD prefix.
  Delete unhelpful comment per Jordan's question.
  Make sure that H5TS_thread_id() is available as either a function or a macro in all configurations.
  Provide local copies of err(3)- and errx(3)-alike functions for Visual Studio compatibility.
  Provide C99/POSIX.1 format strings PRI[doux]{8,16,32,64,MAX,PTR} on systems that are missing <inttypes.h>.
 2020-02-17 10:47:29 -06:00
David Young
fa2b89c6b0 Merge pull request #2325 in HDFFV/hdf5 from ~DYOUNG/werror:h5t_copy to develop 
Merged per discussion with Elena.

* commit '3f903a441ad84001ea66589728bd8b036b6fdfca':
  Take out the temporary performance tests.
  Make calls through a function pointer.  Use the same number of arguments, always.
  Increase iterations, provide a baseline for no-op, simplify the overhead case a bit.
  Temporarily add some code that measures the time to run the simplest possible H5T__copy_all()-like routine 10 million times and then measures the version with FUNC_ENTER_STATIC/_LEAVE_NOAPI and a HGOTO_ERROR() statement.
  H5T_copy() constification plus Quincey's contributions.
 2020-02-17 10:46:52 -06:00
David Young
3f903a441a Take out the temporary performance tests. 2020-02-14 15:01:44 -06:00
David Young
b4697f9692 Use HD prefix. 2020-02-12 14:07:47 -06:00
Allen Byrne
ddf139aed5 Merge pull request #2377 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit 'a68302883a243c33ceb495e3e151331fa267f455':
  TRILAB-148 fix sanitizer and -fsanitize usage
 2020-02-12 11:32:52 -06:00
Allen Byrne
a68302883a TRILAB-148 fix sanitizer and -fsanitize usage 2020-02-12 09:42:23 -06:00
Allen Byrne
b8a57cb8dc Merge pull request #2372 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit 'b6ea9d25194797fdfb0880ee9721b95bc1533af7':
  Update sanitizer note.
 2020-02-11 14:20:09 -06:00
Allen Byrne
b6ea9d2519 Update sanitizer note. 2020-02-11 13:48:55 -06:00
David Young
4c7254b6ec Make sure that H5TS_thread_id() is available as either a function or a macro in 
all configurations.

(Merge remote-tracking branch 'origin/thread_id_everywhere' into vs2010-develop)
 2020-02-10 16:59:14 -06:00
Jake Smith
444a666f1d Merge pull request #2357 in HDFFV/hdf5 from ~JAKE.SMITH/hdf5:develop to develop 
* commit '6a93d1f834184853913d43e50fda5b350fa1dc38':
  Fix improper S3 signing key null check (HDFFV-11015).
 2020-02-10 16:57:33 -06:00
Scot Breitenfeld
ae8091f568 Merge pull request #2366 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to develop 
* commit '79c62f9a25906705735efa9286124c0d3aa9276a':
  HDFFV-11018 Add Fortran H5F_LIBVER_V*_F definitions
 2020-02-10 15:39:42 -06:00
M. Scot Breitenfeld
79c62f9a25 HDFFV-11018 Add Fortran H5F_LIBVER_V*_F definitions 
Added
------
New Definitions:

  INTEGER :: H5F_LIBVER_ERROR_F
  INTEGER :: H5F_LIBVER_NBOUNDS_F
  INTEGER :: H5F_LIBVER_V18_F
  INTEGER :: H5F_LIBVER_V110_F
  INTEGER :: H5F_LIBVER_V112_F
  INTEGER :: H5F_LIBVER_V114_F

New API:
  h5pget_libver_bounds_f(fapl_id, low, high, hdferr)

Removed:
  call to C wrapper h5pset_libver_bounds_c in h5pset_libver_bounds_f
 2020-02-10 15:30:18 -06:00
David Young
f9a8fd5a4c H5_HAVE_PARALLEL, _DEBUG_API, etc. Add attributes to some variables and 
parameters that are unused under some configurations.
 2020-02-10 14:41:20 -06:00
David Young
3d2c0d7b0d Delete unhelpful comment per Jordan's question. 2020-02-10 13:31:56 -06:00
Muqun Yang
e5ae310109 Merge pull request #2361 in HDFFV/hdf5 from ~MYANG6/hdf5-develop:develop to develop 
* commit '1b937c69f4b8187401eeb8eef195bbcc2ea58312':
  HDFFV-11014, fix the h5repack issue that misses a few attributes during the repacking. The flag that checks the object reference attribute is not updated properly. The fix is trivial. Just need to move the flag update line into the inner loop. Tested at Jelly. Also update the release.txt.
 2020-02-07 15:26:30 -06:00