them H5D calls.
* Moved H5DOread/write_chunk() to H5Dio.c and renamed to H5D*.
* Moved the hl/test/test_dset_opt test to test/ and renamed to
direct_chunk.
* Moved the hl/test/dectris_hl_perf test to tools/test/perform
and renamed to direct_write_perf.
* Updated autotools and CMake files.
This is the similar set of changes that was checked in to 1.8 branch:
Incorporate the code changes that were missing from the original patch:
(1) Additional tests in hl/test/test_dset_opt.c
(2) Fix in src/H5Dchunk.c for direct access when an entry is in chunk cache but not dirty
Tested on platypus, ostrich, kituo, mayll, osx1010test, moohan, quail, emu.
This is the same patch that had already been integrated to 1.8 branch (pull request #387).
Tested on moohan, ostrich, platypus, emu, osx1010test, quail, kituo, mayll.
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* commit '089afc48561ba8838d6a515c6b00fc6f7032ca13':
Updated the developer flags so that they respect gcc versions.
Description: Added data files from the packet table vlen tests to the CHECK_CLEANFILES list. Platforms tested: Linux/64 (jelly)
- In the test for HDFFV-9758, a pragma pack(1) caused failure on Emu
because Sparc cannot access misaligned data. Changed it to pack() to
do the default alignment.
- Added DOXYGEN_SHOULD_SKIP_THIS blocks to private elements to prevent
warnings from doxygen.
Platforms tested:
SunOS 5.11 (emu)
Linux/32 2.6 (jam)
- Removed calls to H5Tget_native_type in the PT code. The application would
need to do that if desired.
- Added Abhi's program to tests to verify the fix.
- This fix might have fixed HDFFV-9927, HDFFV-9042, and the issue reported
by Barbara Jones from Ametek as well.
Platforms tested:
Linux/32 2.6 (jam)
Linux/64 (jelly)
Darwin (osx1010test)
* commit 'd817b63020310b6f275a569529075551dd2b756e':
Fix copyright to point to cmake
Fix cyclic depends due to typo
Correct how include is used when located inside project
HDFFV-9961: Add GIT option to ext lib macros
Update copyright to latest from kitware
* commit 'f9364c0080405bb36d704eb3f9505029d3da41f4':
removed the use of C_SIZEOF for non BIND(C) derived type
Fixed test to use storage_size instead of c_sizeof when available.
fixed missing closing bracket
Removed unused variables.
Fixed: Fortran_DOUBLE was being set to C_LONG_DOUBLE when C_LONG_DOUBLE is not available.
Removed duplicate FCFLAG
Removed duplicate FCFLAG.
Added number of integer KINDs found to the header files.
Added path to source include files when building buidiface.
Added rule to build buildiface program, without a rule, build would add repeated compile options when using the NAG compiler.
Misc. cleaning up of the program.
Added SEQUENCE to derived types for NAG:
misc. format code-cleanup
Removed the use of hard-coded integer KINDs.
Code clean-up.
HDFFV-9973 Fortran library fails to compile and fails tests with NAG compiler
* commit '5a7880183025f56421cf6f2274d9f1ac36f59641':
Clean up hardcoded constants and check return values better. (Comments from group code review)
Description: Cleanups from Dana's review.
Description: Further warning cleanups: from 667 warnings to 503.
Section 81 of the compiler manual, e.g. at
http://www.nag.co.uk/nagware/np/r61_doc/np61_manual.pdf
covers details about the compiler's internal representations, including
"
Fortran derived types are translated into C structs.
If BIND(C) or SEQUENCE is used, the order of the items within
the struct is the same as the order within the derived type definition.
Otherwise, the order of items is permuted to
put larger types at the front of the struct so as to improve alignment
and reduce storage; the C output code can be
inspected to determine the ordering used.
"
Removed INTENT(IN) to fix segfaults in C APIs for TYPE(C_PTR).
Tested: NAG (gnu)
More warning cleanups, bringing the build down to 25 unique types of
warnings, with 550 warnings in 122 files (down from 28, 770, and 134).
Tested on:
MacOSX/64 10.11.5 (amazon) w/serial & parallel
(h5committest forthcoming)
