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Author SHA1 Message Date
Dana Robinson
5fabfb6079 [svn-r29312] Removed -Wnonnull from the gnu C++ flags. It's not used for C++. 
Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial w/ C++
 2016-03-07 11:58:11 -05:00
Allen Byrne
d447f6a1c5 [svn-r29307] Add Java to new configuration 2016-03-07 11:01:53 -05:00
Binh-Minh Ribler
b346cb0599 [svn-r29306] Purpose: Add function 
Description:
    Added member function ArrayType::operator= because ArrayType has
    pointer data members.
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
 2016-03-07 10:42:30 -05:00
Allen Byrne
3247df1224 [svn-r29301] Update valgrind cacheinit file to match regular. 2016-03-07 08:29:12 -05:00
Larry Knox
f83c88d9ae [svn-r29295] Replaced H5Acreate with H5Acreate2 in hl/test/test_packet_vlen.c line 758 to eliminate error with configure option --wit-default-api-version=v16. 
Tested with option and h5committest.new.
 2016-03-06 17:01:59 -05:00
Elena Pourmal
a6c9f83aee [svn-r29292] Maintenance: Restored RELEASE.txt from rev 27551 and added entries from Allen and Binh-Minh. 
Other main changes that were done to trunk should be documented before the 1.10.0 code freeze.

This file will be added as HISTORY-1_9_0-1_10_0.txt to the 1_10 branch when the branch is created and will be part
of the HDF5 1.10.* source distribution.
 2016-03-06 13:15:05 -05:00
Dana Robinson
f5b516d0c9 [svn-r29279] Tidying of H5C_load_entry() before complicated merge. 
No significant code changes. Smoke checked on 64-bit Windows 10
with VS 2015 Pro.
 2016-03-04 22:36:14 -05:00
Allen Byrne
027c960fd1 [svn-r29275] HDFFV-9698: fix subsetting issues with h5dump 2016-03-04 15:49:15 -05:00
Allen Byrne
40cdbe0b8d [svn-r29274] HDFFV-9698: fix subsetting issues with h5dump 2016-03-04 15:41:12 -05:00
Allen Byrne
1f10dc7f11 [svn-r29272] Add code to deal with two source files for test_packet test. 2016-03-04 15:12:05 -05:00
Binh-Minh Ribler
2a714ac4c0 [svn-r29270] Description: 
Updated for "Improve Packet Table library" commit 29269.
 2016-03-04 14:50:52 -05:00
Binh-Minh Ribler
9592119ffd [svn-r29269] Purpose: Improve Packet Table library 
Description:
    The Packet Table API used to have fixed-length and variable-length functions
    (i.e., H5PTcreate_fl and H5PTcreate_vl), but in 2006, the vlen functions
    were ifdef'ed out with VLPT_REMOVED, see HDFFV-442. The majority of this
    revision includes removing unused vlen stuff, adding various vlen tests,
    initial code cleanup, and first pass of commenting.
    Details:
      - Removed the VLPT_REMOVED ifdef, but keep H5PTis_varlen and the free
        function because they are useful or even needed, but the free
        function's name is changed to be more appropriate for both
        read/write buffers, i.e., H5PTfree_vlen_buff.

      - The new test file, test_packet_vlen.c, contains tests showing packet
        tables, containing various types of vlen data, can be created with
        the fixed-length function

      - Two accessor functions were added per HDFFV-8623/patch 003.
            /* Returns the ID of the dataset associated with the packet table */
            hid_t H5PTget_dataset(hid_t table_id);

            /* Returns the ID of the datatype the packet table uses */
            hid_t H5PTget_type(hid_t table_id);

      - Various cleanup: replacing 0/-1 with SUCCEED/FAIL and H5I_BADID with
        H5I_INVALID_HID, and removing many warnings.

Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
 2016-03-04 14:49:14 -05:00
Allen Byrne
6e7e6bb3aa [svn-r29266] Header generation default should be OFF. 
For Trunk - cacheinit.cmake should enable it ON
 2016-03-04 10:22:29 -05:00
Allen Byrne
49e774296b [svn-r29262] HDFFV-9241: Print fill value as "DEFAULT" instead of value 0 2016-03-03 11:02:55 -05:00
Allen Byrne
d0444d4f2b [svn-r29261] HDFFV-9241: Print fill value as "DEFAULT" instead of value 0 2016-03-03 10:27:48 -05:00
Allen Byrne
28ee82a07b [svn-r29259] HDFFV-9066: Improve h5dump usage statement for -O F, -ddl=F option. 2016-03-03 09:07:49 -05:00
Allen Byrne
f0a7f5978e [svn-r29257] HDFFV-9705: h5dump should not print filters or allocation time info for VDS files 2016-03-03 08:56:44 -05:00
Allen Byrne
16f2388832 [svn-r29248] Fix test results for HDF_JAVA 2016-03-01 12:54:56 -05:00
Allen Byrne
e836bfd010 [svn-r29247] Fix return type 2016-03-01 12:48:41 -05:00
Mohamad Chaarawi
c9c8ec5f7c [svn-r29245] use HDONE_ERROR instead of HGOTO after done. 2016-03-01 11:28:33 -05:00
Allen Byrne
281a4901f6 [svn-r29242] Set default or override val 2016-03-01 11:00:56 -05:00
Allen Byrne
7705a4d914 [svn-r29239] Add HDF_JAVA AC_SUST line for settings file 2016-03-01 10:25:56 -05:00
Allen Byrne
16e529f5a9 [svn-r29237] Missed a "then" 2016-03-01 10:04:39 -05:00
Allen Byrne
6152dd6532 [svn-r29236] Check for shared libs only within enable-java block 2016-03-01 09:50:49 -05:00
Allen Byrne
8538eedde3 [svn-r29234] Fix H5 LIB OPTIONS macro for correct ARGN support 2016-02-29 16:24:31 -05:00
Allen Byrne
c9ea243157 [svn-r29233] Add ARGN option for soversion arguments 2016-02-29 16:07:27 -05:00
Allen Byrne
a0485058d6 [svn-r29232] add debug symbols library to install 2016-02-29 15:56:08 -05:00
Allen Byrne
83b5bed5d4 [svn-r29231] Check if szip is enabled before attempting to run example with szip. 2016-02-29 15:47:35 -05:00
Allen Byrne
6e9e1d67f5 [svn-r29229] Turn java OFF by default. 2016-02-29 12:25:27 -05:00
Allen Byrne
198ceb5fcc [svn-r29227] HDFFV-9552: merge in java code. 
new files added.
 2016-02-28 21:45:23 -05:00
Allen Byrne
63249be0e1 [svn-r29226] HDFFV-9552: merge in java code. 2016-02-28 21:43:00 -05:00
Allen Byrne
a1617b7cdb [svn-r29222] HDFFV-9570: Fix segfault when optional args are last option on command line. 
Tested: java_merge DT
 2016-02-28 12:58:37 -05:00
Vailin Choi
337e62226c [svn-r29202] Fix for unknown message HDFFV-9697. 
Tested on jam, ostrich, platypus, kite, quail, osx1010test, emu, mayll, moohan.
 2016-02-24 16:30:35 -05:00
Allen Byrne
016ebfcdf2 [svn-r29198] Remove if condition for test mask situation 2016-02-24 09:55:14 -05:00
Allen Byrne
f74042d4e8 [svn-r29190] Add checking for *.err file before trying to read 2016-02-23 15:50:02 -05:00
Allen Byrne
f7689087de [svn-r29186] HDFFV-9654: add VDS options to h5dump 
includes new data files
 2016-02-23 15:23:46 -05:00
Dana Robinson
807187e2f2 [svn-r29183] Fixed missing reopen test call in tfile from HDFFV-8740 fix. 
Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial w/ fortran and C++
 2016-02-22 16:45:28 -05:00
Dana Robinson
19a8216bd5 [svn-r29182] Re-commit of HDFFV-8740 fix, which adds the ability to configure 
external dataset storage path behavior.

This check-in fixes a bug in the original check-in where the
external path stored in the file struct was not copied on reopen
causing subsequent dataset operations to fail.

Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial w/ fortran and C++
           autotools parallel (MPICH 3.1.4) w/ fortran
 2016-02-22 16:40:03 -05:00
Dana Robinson
7511d8b469 [svn-r29179] Revert of 29177 which breaks the autotools build. 
Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial
 2016-02-22 15:32:01 -05:00
Allen Byrne
910d420409 [svn-r29177] HDFFV-9654: add VDS options to h5dump 2016-02-22 11:57:07 -05:00
Scot Breitenfeld
fe2b65f3e4 [svn-r29172] Fixed double word typo in #ifdef H5_FORTRAN_HAVE_C_SIZEOF 2016-02-19 16:12:32 -05:00
Scot Breitenfeld
553374e665 [svn-r29169] Changed #ifdef to use H5_FORTRAN_C_LONG_DOUBLE_IS_UNIQUE instead of H5_FORTRAN_HAVE_C_LONG_DOUBLE 
Tested: jam (gnu)
 2016-02-19 15:39:11 -05:00
Scot Breitenfeld
5126111606 [svn-r29165] Various rododoc fixes. Effects comments only. 2016-02-19 14:09:34 -05:00
Scot Breitenfeld
0859dd40bb [svn-r29163] changed robodoc specs to look for .F90 files 2016-02-19 13:11:26 -05:00
Scot Breitenfeld
f4430184ab [svn-r29162] added robodoc header information 2016-02-19 13:10:27 -05:00
Mike McGreevy
70c24f201c [svn-r29158] HDFFV-9190: Changed configure.ac to define H5_USE_18_API_DEFAULT when 
'v18' is provided to --with-default-api-version.

Tested: h5committest.new
        and kituo with --with-default-api-version=v18
 2016-02-19 11:21:00 -05:00
Scot Breitenfeld
1b2c30753d [svn-r29155] HDFFV-9652: Add fortran wrappers/test for collective metadata functions 
Tested: h5committest.new
 2016-02-19 09:24:11 -05:00
Mohamad Chaarawi
70ad55b105 [svn-r29150] fix for Jira issue 9670 - HDF5 segfaults on corrupted file. 
Change compare callback in Btree2 class to correctly account for errors.

tested on bb-8.
 2016-02-18 15:50:37 -05:00
Dana Robinson
b3df4e9c8d [svn-r29142] Updated the Intel files in config to use the new NO_SYMBOLS flags 
and modified the failsafe configure flags in ibm-aix to use the
new scheme.
 2016-02-17 13:15:58 -05:00
Dana Robinson
52705fa6f0 [svn-r29139] Updated PGI compiler files to set NO_SYMBOLS_CFLAGS/FCFLAGS and 
moved the -s (strip symbols) option from the production flags to the
no symbols flags.

Tested on: platypus w/ PGI 15.7 (C, C++, Fortran)
 2016-02-17 10:08:33 -05:00