mirror of
https://github.com/HDFGroup/hdf5.git
synced 2024-12-27 08:01:04 +08:00
Merge pull request #12 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit '1bad18cc24e0108dea2a9e48402bba9d32e3b96c': Add bin/pkgscrpts files to MANIFEST. dd bin/pkgscrpts directory with scripts to package deployed unix binaries into tarfiles.
This commit is contained in:
commit
f6e22b669e
4
MANIFEST
4
MANIFEST
@ -91,6 +91,10 @@
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./bin/timekeeper _DO_NOT_DISTRIBUTE_
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./bin/trace
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./bin/yodconfigure
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./bin/pkgscrpts/h5rmflags _DO_NOT_DISTRIBUTE_
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./bin/pkgscrpts/makeHDF5BinaryTarfiles.pl _DO_NOT_DISTRIBUTE_
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./bin/pkgscrpts/makeInternalREADME.pl _DO_NOT_DISTRIBUTE_
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./bin/pkgscrpts/makeOuterREADME.pl _DO_NOT_DISTRIBUTE_
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./config/COPYING
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./config/BlankForm
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|
167
bin/pkgscrpts/h5rmflags
Executable file
167
bin/pkgscrpts/h5rmflags
Executable file
@ -0,0 +1,167 @@
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#! /bin/sh
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#
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# Copyright by The HDF Group.
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# Copyright by the Board of Trustees of the University of Illinois.
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# All rights reserved.
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#
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# This file is part of HDF5. The full HDF5 copyright notice, including
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# terms governing use, modification, and redistribution, is contained in
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# the files COPYING and Copyright.html. COPYING can be found at the root
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# of the source code distribution tree; Copyright.html can be found at the
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# root level of an installed copy of the electronic HDF5 document set and
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# is linked from the top-level documents page. It can also be found at
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# http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have
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# access to either file, you may request a copy from help@hdfgroup.org.
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#
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## Remove paths to libraries used to build HDF5 when packaging HDF5
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## binaries.
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## For help page, use "h5rmflags -help"
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# Constants definitions
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EXIT_SUCCESS=0
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EXIT_FAILURE=1
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# Function definitions
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# show help page
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usage() {
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# A wonderfully informative "usage" message.
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echo "usage: $prog_name [OPTIONS]"
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echo " OPTIONS:"
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echo " -help|help This help message"
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echo " -echo Show all the shell commands executed"
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echo " -force No prompt, just do it"
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echo " -prefix=DIR New directory to find HDF5 lib/ and include/"
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echo " subdirectories [default: current directory]"
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echo " -tool=TOOL Tool to update. TOOL must be in the current"
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echo " directory and writable. [default: $h5tools]"
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echo " -show Show the commands without executing them"
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echo " "
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exit $EXIT_FAILURE
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}
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# display variable values
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dump_vars(){
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echo "====Showing all variable values====="
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echo prefix=$prefix
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echo h5tools=$h5tools
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echo "====End Showing====="
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}
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# show actions to be taken
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show_action()
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{
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echo "Update the following tools because they are now installed at a new directory"
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for t in $foundtools; do
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echo "${t}:"
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echo " current setting=`sed -e '/^prefix=/s/prefix=//p' -e d $t`"
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echo " new setting="\""$prefix"\"
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done
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}
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# Report Error message
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ERROR()
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{
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echo "***ERROR***"
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echo "$1"
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}
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# Main
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#
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# Initialization
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h5tools="h5cc h5pcc h5fc h5pfc h5c++" # possible hdf5 tools
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foundtools= # tools found and will be modified
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fmode= # force mode, default is off
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prefix=`(cd ..;pwd)`
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# Parse options
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for arg in $@ ; do
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case "$arg" in
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-prefix=*)
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prefix="`expr "$arg" : '-prefix=\(.*\)'`"
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;;
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-echo)
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set -x
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;;
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-show)
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SHOW="echo"
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;;
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-tool=*)
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h5tools="`expr "$arg" : '-tool=\(.*\)'`"
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;;
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-help|help)
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usage
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;;
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-force)
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fmode=yes
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;;
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*)
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ERROR "Unknown Option($arg)"
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usage
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exit $EXIT_FAILURE
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;;
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esac
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done
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# Sanity checks
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#if [ ! -d $prefix ]; then
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# ERROR "prefix($prefix) is not an existing directory"
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# exit $EXIT_FAILURE
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#fi
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for x in $h5tools; do
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if [ -f $x ]; then
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foundtools="$foundtools $x"
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if [ ! -w $x ]; then
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ERROR "h5tool($x) is not writable"
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exit $EXIT_FAILURE
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fi
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fi
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done
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if [ -z "$foundtools" ]; then
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ERROR "found no tools to modify"
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exit $EXIT_FAILURE
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fi
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# Show actions to be taken and get consent
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show_action
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# Update them
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if [ "$SHOW" = "echo" ]; then
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echo "===Update commands are:===="
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# cat $CMDFILE
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echo "===End Update commands====="
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fi
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for t in $foundtools; do
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echo Update $t ...
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# COMMAND="ed - $t"
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# if [ "$SHOW" = "echo" ]; then
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# echo $COMMAND
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# else
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# $COMMAND < $CMDFILE
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ed - $t << end
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g/^H5BLD_CPPFLAGS/s/-I\/.*include //g
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g/^H5BLD_LDFLAGS/s/-L\/.*lib //g
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g/^H5BLD_LDFLAGS/s/-L\/.*lib64 //g
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.
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w
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end
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# fi
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done
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# Cleanup
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#rm -f $CMDFILE
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exit $EXIT_SUCCESS
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# Some possible future features to add
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# CCBASE - Name of the alternative C compiler
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# CLINKERBASE - Name of the alternative linker
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# LDFLAGS - Path to different libraries your application will link with
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# (this path should include the path to the zlib library)
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# LIBS - Libraries your application will link with
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368
bin/pkgscrpts/makeHDF5BinaryTarfiles.pl
Executable file
368
bin/pkgscrpts/makeHDF5BinaryTarfiles.pl
Executable file
@ -0,0 +1,368 @@
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#!/usr/bin/perl
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# makeTarFiles.pl
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# Copyright by The HDF Group.
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# Copyright by the Board of Trustees of the University of Illinois.
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# All rights reserved.
|
||||
#
|
||||
# This file is part of HDF5. The full HDF5 copyright notice, including
|
||||
# terms governing use, modification, and redistribution, is contained in
|
||||
# the files COPYING and Copyright.html. COPYING can be found at the root
|
||||
# of the source code distribution tree; Copyright.html can be found at the
|
||||
# root level of an installed copy of the electronic HDF5 document set and
|
||||
# is linked from the top-level documents page. It can also be found at
|
||||
# http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have
|
||||
# access to either file, you may request a copy from help@hdfgroup.org.
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||||
#
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#
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#
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use warnings;
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use strict;
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use Cwd;
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use File::Basename;
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my %destsubdir = ('emu' => 'sunos-5.11-sparc-32-sunc512',
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'emu64' => 'sunos-5.11-sparc-64-sunc512',
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'ostrich' => 'linux-el6-ppc64-gcc447',
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'ostrichxl' => 'linux-el6-ppc64-xl13.1',
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'platypus' => 'linux-centos6-x86_64-gcc447',
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'platypus32' => 'linux-centos6-x86_64-32-gcc447',
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'moohan' => 'linux-centos7-x86_64-gcc485',
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'moohan32' => 'linux-centos7-x86_64-32-gcc485',
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'kite' => 'osx-10.8-x86_64-clang5.1',
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'quail' => 'osx-10.9-x86_64-clang6.0',
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'osx1010test' => 'osx-10.10-x86_64-clang6.0');
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my %szipdir = ('emu' => '/mnt/hdf/packages/szip/shared/encoder/SunOS-5.10',
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'emu-static' => '/mnt/hdf/packages/szip/static/encoder/SunOS-5.10',
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'emu64' => '/mnt/hdf/packages/szip-PIC/shared/encoder/SunOS-5.11-64',
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'emu64-static' => '/mnt/hdf/packages/szip-PIC/shared/encoder/SunOS-5.11-64',
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'kite' => '/mnt/hdf/packages/szip/shared/encoder/MacOS-10.8',
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'kite-static' => '/mnt/hdf/packages/szip-PIC/static/encoder/MacOS-10.8',
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'ostrich32' => '/mnt/hdf/packages/szip/shared/encoder/Linux2.6-ppc64-gcc',
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'ostrich32-static' => '/mnt/hdf/packages/szip/static/encoder/Linux2.6-ibmppc64-gcc-32',
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'ostrich' => '/mnt/hdf/packages/szip/shared/encoder/Linux2.6-ppc64-gcc-64',
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'ostrich-static' => '/mnt/hdf/packages/szip/static/encoder/Linux2.6-ibmppc64-gcc',
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'ostrichxl' => '/mnt/hdf/packages/szip/shared/encoder/Linux2.6-ppc64-gcc-64',
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'ostrichxl-static' => '/mnt/hdf/packages/szip/static/encoder/Linux2.6-ibmppc64-gcc',
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'osx1010test' => '/mnt/hdf/packages/szip/shared/encoder/MacOS-10.8',
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'osx1010test-static' => '/mnt/hdf/packages/szip-PIC/static/encoder/MacOS-10.8',
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'moohan' => '/mnt/hdf/packages/szip/shared/encoder/Linux2.6-x86_64-gcc',
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'moohan-static' => '/mnt/hdf/packages/szip/static/encoder/Linux2.6-x86_64-gcc',
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'moohan32' => '/mnt/hdf/packages/szip/shared/encoder/Linux2.6-x86_64-gcc-m32',
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'moohan32-static' => '/mnt/hdf/packages/szip-PIC/static/encoder/Linux2.6-x86_64-gcc-m32',
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'platypus32' => '/mnt/hdf/packages/szip/shared/encoder/Linux2.6-x86_64-gcc-m32',
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'platypus32-static' => '/mnt/hdf/packages/szip-PIC/static/encoder/Linux2.6-x86_64-gcc-m32',
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'platypus' => '/mnt/hdf/packages/szip/shared/encoder/Linux2.6-x86_64-gcc',
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'platypus-static' => '/mnt/hdf/packages/szip/static/encoder/Linux2.6-x86_64-gcc',
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'quail' => '/mnt/hdf/packages/szip/shared/encoder/MacOS-10.8',
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'quail-static' => '/mnt/hdf/packages/szip-PIC/static/encoder/MacOS-10.8');
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my %zlibdir = ('emu' => '/mnt/hdf/packages/zlib-125/shared/SunOS-5.10',
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'emu-static' => '/mnt/hdf/packages/zlib-125/static/SunOS-5.10',
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'emu64' => '/mnt/hdf/packages/zlib-123-PIC/SunOS-5.11-64',
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'emu64-static' => '/mnt/hdf/packages/zlib-123-PIC/SunOS-5.11-64',
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'kite' => ' /mnt/hdf/packages/zlib-125/shared/mac-intel-x86_64',
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'kite-static' => ' /mnt/hdf/packages/zlib-125/static/mac-intel-x86_64',
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'ostrich32' => '/mnt/hdf/packages/zlib-125/PIC/Linux2.6-ppc64-gcc',
|
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'ostrich32-static' => '/mnt/hdf/packages/zlib-125/PIC/Linux2.6-ppc64-gcc',
|
||||
'ostrich' => '/mnt/hdf/packages/zlib-125/PIC/Linux2.6-ppc64-gcc-64',
|
||||
'ostrich-static' => '/mnt/hdf/packages/zlib-125/PIC/Linux2.6-ppc64-gcc-64',
|
||||
'ostrichxl' => '/mnt/hdf/packages/zlib-125/PIC/Linux2.6-ppc64-gcc-64',
|
||||
'ostrichxl-static' => '/mnt/hdf/packages/zlib-125/PIC/Linux2.6-ppc64-gcc-64',
|
||||
'osx1010test' => ' /mnt/hdf/packages/zlib-125/shared/mac-intel-x86_64',
|
||||
'osx1010test-static' => ' /mnt/hdf/packages/zlib-125/static/mac-intel-x86_64',
|
||||
'moohan' => '/mnt/hdf/packages/zlib-125/shared/Linux2.6-x86_64-gcc',
|
||||
'moohan-static' => '/mnt/hdf/packages/zlib-125/static/Linux2.6-x86_64-gcc',
|
||||
'moohan32' => '/mnt/hdf/packages/zlib-128/Linux2.6-x86_64-gcc-m32',
|
||||
'moohan32-static' => '/mnt/hdf/packages/zlib-128/Linux2.6-x86_64-gcc-m32',
|
||||
'platypus32' => '/mnt/hdf/packages/zlib-128/Linux2.6-x86_64-gcc-m32',
|
||||
'platypus32-static' => '/mnt/hdf/packages/zlib-128/Linux2.6-x86_64-gcc-m32',
|
||||
'platypus' => '/mnt/hdf/packages/zlib-125/shared/Linux2.6-x86_64-gcc',
|
||||
'platypus-static' => '/mnt/hdf/packages/zlib-125/static/Linux2.6-x86_64-gcc',
|
||||
'quail' => ' /mnt/hdf/packages/zlib-125/shared/mac-intel-x86_64',
|
||||
'quail-static' => ' /mnt/hdf/packages/zlib-125/static/mac-intel-x86_64');
|
||||
|
||||
my $indirectory = ".";
|
||||
$indirectory = shift;
|
||||
|
||||
my $outdirectory = ".";
|
||||
$outdirectory = shift;
|
||||
|
||||
my $key = ".";
|
||||
#$key = shift;
|
||||
|
||||
my $scriptdirname = dirname(__FILE__);
|
||||
|
||||
unless (-d $outdirectory) {
|
||||
print "$outdirectory not found. Create it or choose another one and try again.\n";
|
||||
exit 1;
|
||||
}
|
||||
|
||||
print "Subdirectories of $indirectory will be tarred and stored in $outdirectory.\n";
|
||||
|
||||
|
||||
my $tarfilename;
|
||||
my $tardirname;
|
||||
my $output;
|
||||
my $cmd;
|
||||
|
||||
# I'm currently copying system zlibs for at least solaris and FreeBSD machines. Since this script runs on jam it may require scp to get the libs.
|
||||
|
||||
#For future reference
|
||||
# command for getting szlib files and links for shared binaries:
|
||||
# tar cvf - -C <szipDir>/lib . | tar xvf - -C <libdir> .
|
||||
# libz.so.1.2.3 and the static files should just be copied because they're in directories
|
||||
# with other files. Then create the libz.so.1 and libz.so symbolic links.
|
||||
sub addzandszlibs {
|
||||
my $dir = shift;
|
||||
my $indirectory = shift;
|
||||
my $currentdir = getcwd();
|
||||
|
||||
if (-d "$indirectory/$dir" ) {
|
||||
my $szdir = $szipdir{$dir};
|
||||
my $zldir = $zlibdir{$dir};
|
||||
if ($dir =~ /static/ || $dir =~ /ostrich/) {
|
||||
$cmd = "cp $szdir/lib/libsz.a $indirectory/$dir/lib";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
$cmd = "cp $zldir/lib/libz.a $indirectory/$dir/lib";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
} elsif ($dir eq "freedom" || $dir eq "loyalty") {
|
||||
$cmd = "cp $szdir/lib/libsz.so.2 $indirectory/$dir/lib";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
$cmd = "cp $zldir/lib/libz.so.5 $indirectory/$dir/lib";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
chdir "$indirectory/$dir/lib" or die "Couldn't change directory to $indirectory/$dir/lib, $!";
|
||||
$cmd = "ln -s libsz.so.2 libsz.so";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
$cmd = "ln -s libz.so.5 libz.so";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
chdir $currentdir or die "Couldn't change directory back to $currentdir, $!";
|
||||
} elsif ($dir eq "quail" || $dir eq "kite" || $dir eq "osx1010test") {
|
||||
#we've been using the static libraries for the macs - built with -fPIC
|
||||
# $cmd = "cp $szdir/lib/libsz.a $indirectory/$dir/lib";
|
||||
# $output = `$cmd`;
|
||||
# print $output;
|
||||
# $cmd = "cp $zldir/lib/libz.a $indirectory/$dir/lib";
|
||||
# $output = `$cmd`;
|
||||
# print $output;
|
||||
$cmd = "cp $szdir/lib/libsz.2.0.0.dylib $indirectory/$dir/lib";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
$cmd = "cp $zldir/lib/libz.1.2.5.dylib $indirectory/$dir/lib";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
chdir "$indirectory/$dir/lib" or die "Couldn't change directory to $indirectory/$dir/lib, $!";
|
||||
$cmd = "ln -s libsz.2.0.0.dylib libsz.2.dylib";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
$cmd = "ln -s libsz.2.0.0.dylib libsz.dylib";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
$cmd = "ln -s libz.1.2.5.dylib libz.1.dylib";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
$cmd = "ln -s libz.1.2.5.dylib libz.dylib";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
chdir $currentdir or die "Couldn't change directory back to $currentdir, $!";
|
||||
|
||||
} elsif ($dir eq "emu64") {
|
||||
$cmd = "cp $szdir/lib/libsz.so.2.0.0 $indirectory/$dir/lib";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
$cmd = "cp $zldir/lib/libz.a $indirectory/$dir/lib";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
chdir "$indirectory/$dir/lib" or die "Couldn't change directory to $indirectory/$dir/lib, $!";
|
||||
$cmd = "ln -s libsz.so.2.0.0 libsz.so.2";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
$cmd = "ln -s libsz.so.2.0.0 libsz.so";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
chdir $currentdir or die "Couldn't change directory back to $currentdir, $!";
|
||||
|
||||
} elsif ($dir eq "platypus32" || $dir eq "moohan32") {
|
||||
$cmd = "cp $szdir/lib/libsz.so.2.0.0 $indirectory/$dir/lib";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
# $cmd = "cp $zldir/lib/libz.a $indirectory/$dir/lib";
|
||||
# $output = `$cmd`;
|
||||
# print $output;
|
||||
|
||||
chdir "$indirectory/$dir/lib" or die "Couldn't change directory to $indirectory/$dir/lib, $!";
|
||||
$cmd = "ln -s libsz.so.2.0.0 libsz.so.2";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
$cmd = "ln -s libsz.so.2.0.0 libsz.so";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
# $cmd = "ln -s libz.so.1.2.8 libz.so.1";
|
||||
# $output = `$cmd`;
|
||||
# print $output;
|
||||
|
||||
# $cmd = "ln -s libz.so.1.2.8 libz.so";
|
||||
# $output = `$cmd`;
|
||||
# print $output;
|
||||
|
||||
chdir $currentdir or die "Couldn't change directory back to $currentdir, $!";
|
||||
|
||||
} else {
|
||||
$cmd = "cp $szdir/lib/libsz.so.2.0.0 $indirectory/$dir/lib";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
$cmd = "cp $zldir/lib/libz.so.1.2.5 $indirectory/$dir/lib";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
chdir "$indirectory/$dir/lib" or die "Couldn't change directory to $indirectory/$dir/lib, $!";
|
||||
$cmd = "ln -s libsz.so.2.0.0 libsz.so.2";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
$cmd = "ln -s libsz.so.2.0.0 libsz.so";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
$cmd = "ln -s libz.so.1.2.5 libz.so.1";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
$cmd = "ln -s libz.so.1.2.5 libz.so";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
chdir $currentdir or die "Couldn't change directory back to $currentdir, $!";
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
sub makeTarFile {
|
||||
my $directoryname = shift;
|
||||
my $origdirname = shift;
|
||||
my $tarfilename = shift;
|
||||
my $tardirname = shift;
|
||||
$cmd = "mv $indirectory/$origdirname $indirectory/$tardirname";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
if (-d $indirectory."/".$tardirname."/doc/hdf5/examples") {
|
||||
$cmd = "mv $indirectory/$tardirname/doc/hdf5/examples $indirectory/$tardirname/examples";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
$cmd = "rm -rf $indirectory/$tardirname/doc";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
}
|
||||
$cmd = "tar zcvf $outdirectory/$directoryname/$tarfilename -C $indirectory $tardirname";
|
||||
print "Need to run $cmd.\n";
|
||||
$output = `$cmd`;
|
||||
sleep 10;
|
||||
print "Create $tarfilename: $output\n";
|
||||
$cmd = "mv $indirectory/$tardirname $indirectory/$origdirname";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
}
|
||||
|
||||
foreach $key (keys %destsubdir) {
|
||||
print "Process ".$key."\n\n";
|
||||
#skip unless there's a directory by the name of $key or $key-static
|
||||
next unless -d $indirectory.'/'.$key || -d $indirectory.'/'.$key."-static";
|
||||
my $version;
|
||||
# This assumes a static directory. Probably the others should be checked if this
|
||||
# doesn't exist.
|
||||
$cmd = "grep \"HDF5 Version\" $indirectory/$key/lib/libhdf5.settings";
|
||||
$_ = `$cmd`;
|
||||
print $_, "\n";
|
||||
s/HDF5 Version://;
|
||||
s/^\s+//;
|
||||
chomp;
|
||||
$version = $_;
|
||||
#my $directoryname = substr $destsubdir{$key}, 0, rindex($destsubdir{$key}, '-');
|
||||
my $directoryname = $destsubdir{$key};
|
||||
mkdir $outdirectory."/".$directoryname, 0755 unless -d $outdirectory."/".$directoryname;
|
||||
my $staticdir = $key."-static";
|
||||
print $indirectory."/$key tarfile will be put in " . $outdirectory."/".$directoryname."\n";
|
||||
if (-e $outdirectory."/".$destsubdir{$key}."/README") {
|
||||
print $outdirectory."/".$destsubdir{$key}."/README" . " has already been created.\n";
|
||||
}
|
||||
else {
|
||||
print "Make the Outer README file: ";
|
||||
$cmd = "perl ./makeOuterREADME.pl $indirectory/$key $outdirectory $directoryname";
|
||||
print $cmd, "\n";
|
||||
my $output = `$cmd`;
|
||||
print $output;
|
||||
}
|
||||
my $file = "";
|
||||
my @dirnames = "";
|
||||
opendir(DIR, $indirectory) or die "can't open .: $!";
|
||||
while (defined($file = readdir(DIR))) {
|
||||
next unless ($file eq $key || $file eq "$key-static") && -d $indirectory."/".$file;
|
||||
push @dirnames, $file;
|
||||
}
|
||||
foreach my $dir (@dirnames) {
|
||||
next if $dir eq "";
|
||||
print "Make the Inner README files.\n";
|
||||
$cmd = "perl ./makeInternalREADME.pl $indirectory/$dir";
|
||||
print $cmd, "\n";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
print "Add the zlib and szip files for $dir.\n";
|
||||
&addzandszlibs($dir, $indirectory);
|
||||
my $currentdir = getcwd();
|
||||
|
||||
print "Remove all lib*.la files from $dir/lib*.\n";
|
||||
$cmd = "rm $indirectory/$dir/lib*/lib*.la";
|
||||
print $cmd, "\n";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
|
||||
chdir "$indirectory/$dir/bin" or die "Couldn't change directory to $indirectory/$dir/bin, $!";
|
||||
|
||||
$cmd = "$scriptdirname/h5rmflags -force";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
chdir $currentdir or die "Couldn't change directory back to $currentdir, $!";
|
||||
print "Tar up the files into the output directory.\n";
|
||||
if (-d $indirectory."/".$dir) {
|
||||
if ($dir =~ /static/) {
|
||||
$tarfilename = "hdf5-$version-$destsubdir{$key}-static.tar.gz";
|
||||
$tardirname = "hdf5-$version-$destsubdir{$key}-static";
|
||||
} else {
|
||||
$tarfilename = "hdf5-$version-$destsubdir{$key}-shared.tar.gz";
|
||||
$tardirname = "hdf5-$version-$destsubdir{$key}-shared";
|
||||
}
|
||||
&makeTarFile($directoryname, $dir, $tarfilename, $tardirname);
|
||||
}
|
||||
}
|
||||
# If this copy is done after h5rmflags is run on all the directories the compile scripts
|
||||
# in the utilities directory will already have the paths removed.
|
||||
if (-d $indirectory."/".$staticdir) {
|
||||
$cmd = "cp -prv $indirectory/$staticdir/bin $outdirectory/$directoryname/utilities";
|
||||
$output = `$cmd`;
|
||||
print $output;
|
||||
}
|
||||
}
|
||||
|
215
bin/pkgscrpts/makeInternalREADME.pl
Executable file
215
bin/pkgscrpts/makeInternalREADME.pl
Executable file
@ -0,0 +1,215 @@
|
||||
#!/usr/bin/perl
|
||||
# makeInternalREADME.pl
|
||||
#
|
||||
# Copyright by The HDF Group.
|
||||
# All rights reserved.
|
||||
#
|
||||
# This file is part of HDF4. The full HDF4 copyright notice, including
|
||||
# terms governing use, modification, and redistribution, is contained in
|
||||
# the files COPYING and Copyright.html. COPYING can be found at the root
|
||||
# of the source code distribution tree; Copyright.html can be found at the
|
||||
# root level of an installed copy of the electronic HDF4 document set and
|
||||
# is linked from the top-level documents page. It can also be found at
|
||||
# http://hdfgroup.org/HDF4/doc/Copyright.html. If you do not have
|
||||
# access to either file, you may request a copy from help@hdfgroup.org.
|
||||
#
|
||||
|
||||
use warnings;
|
||||
use strict;
|
||||
|
||||
my $section2="For information on compilers and settings used to build these HDF5
|
||||
libraries, please refer to:
|
||||
|
||||
./lib/libhdf5.settings
|
||||
|
||||
The contents of this directory are:
|
||||
|
||||
COPYING - Copyright notice
|
||||
README - This file
|
||||
RELEASE.txt - Detailed information regarding this release
|
||||
bin/ - Directory containing HDF5 pre-compiled utilities
|
||||
include/ - Directory containing HDF5 include files
|
||||
lib/ - Directory containing HDF5 libraries and settings
|
||||
share/ - Directory containing example code in C, C++, and
|
||||
Fortran using HDF5 and HDF5 HL library APIs. The
|
||||
shell scripts provided with these examples will
|
||||
compile and run them, and will also test the
|
||||
h5cc, h5c++, and h5fc compile scripts found
|
||||
in the installed bin directory.
|
||||
|
||||
These binaries were built with the ZLIB and SZIP (version 2.1, Encoder
|
||||
ENABLED) external libraries which are included in the lib directory for
|
||||
convenience.
|
||||
|
||||
We also provide the ZLIB and SZIP source code on our ftp server at:
|
||||
|
||||
ftp://ftp.hdfgroup.org/lib-external/
|
||||
|
||||
The official ZLIB and SZIP pages are at:
|
||||
|
||||
ZLIB: http://www.zlib.net/
|
||||
SZIP: http://hdfgroup.org/doc_resource/SZIP/
|
||||
|
||||
";
|
||||
|
||||
my $section3 = "If using the shared libraries, you must add the HDF5 library path
|
||||
to the LD_LIBRARY_PATH variable.
|
||||
";
|
||||
|
||||
my $section4 = "We provide scripts for compiling applications with the HDF5 libraries:
|
||||
|
||||
bin/h5cc - for C
|
||||
bin/h5fc - for F90 (if Fortran 90 library is included with the binaries)
|
||||
bin/h5c++ - for C++ (if C++ library is included with the binaries)
|
||||
|
||||
After you have installed the binaries to their final destination, you can use
|
||||
these scripts (h5cc, h5fc, h5c++) to compile. However, you must first run
|
||||
./h5redeploy in the bin directory to change site specific paths in the scripts.
|
||||
|
||||
You may also need to change other variables in the scripts, depending
|
||||
on how things are set up on your system. Here are some of the variables
|
||||
to check:
|
||||
|
||||
prefix - Path to the HDF5 top level installation directory
|
||||
CCBASE - Name of the C compiler
|
||||
CLINKERBASE - Name of the linker
|
||||
LIBS - Libraries your application will link with
|
||||
|
||||
For further details refer to the INSTALL files in
|
||||
ftp://ftp.hdfgroup.org/HDF5/current/src/unpacked/release_docs/
|
||||
or in the ./release_docs/ directory of the HDF5 source code, which can be found
|
||||
on the HDF Group ftp server at ftp://ftp.hdfgroup.org/HDF5/current/src/.
|
||||
|
||||
Please send questions, comments, and suggestions to the appropriate
|
||||
contact address from http://www.hdfgroup.org/about/contact.html
|
||||
|
||||
|
||||
";
|
||||
|
||||
my $indirectory = ".";
|
||||
$indirectory = shift;
|
||||
my $linktype = "shared";
|
||||
if ($indirectory =~ /static/) {
|
||||
$linktype = "static";
|
||||
}
|
||||
my $modestring="";
|
||||
if ($indirectory =~ /32/) {
|
||||
$modestring = "in 32 bit mode ";
|
||||
}
|
||||
|
||||
my $version;
|
||||
|
||||
my $outfile = "$indirectory/README";
|
||||
open OUTFILE, ">$outfile" or die "$!Couldn't open $outfile - check permissions for $indirectory\n";
|
||||
my $hostname;
|
||||
my $cmd = "grep \"HDF5 Version\" $indirectory/lib/libhdf5.settings";
|
||||
$_ = `$cmd`;
|
||||
#print OUTFILE $_, "\n";
|
||||
s/HDF5 Version://;
|
||||
s/^\s+//;
|
||||
chomp;
|
||||
$version = $_;
|
||||
#print OUTFILE $_, "\n";
|
||||
|
||||
my $versionstring= "This directory contains the $linktype binary distribution of HDF5-".$version;
|
||||
|
||||
$cmd = "grep \"Uname information:\" $indirectory/lib/libhdf5.settings";
|
||||
$_ = `$cmd`;
|
||||
s/Uname information://;
|
||||
s/^\s+//;
|
||||
#print OUTFILE $_;
|
||||
chomp;
|
||||
#s/(^\w+)(\s)(\S+)/$1/;
|
||||
#s/(^.*)(-)(.*)(200[7-8])(.*)(\s)(\S+)/$1 $5/;
|
||||
#my $platformstring = "\nthat was compiled on:" . $_ . " ";
|
||||
my $platformstring = "";
|
||||
my $hostnamestring = $_;
|
||||
my @hostnamestring = split / /, $hostnamestring;
|
||||
#print OUTFILE "Size of hostnamestring is ", scalar @hostnamestring, "\n";
|
||||
#print OUTFILE $hostnamestring[0] . "\t" . $hostnamestring[2]."\t".$hostnamestring[19]."\n";
|
||||
$hostname = $hostnamestring[1];
|
||||
#my $size = scalar @hostnamestring;
|
||||
if ($hostname =~ /loyalty/) {
|
||||
$platformstring = "\nthat was compiled " . $modestring . "on: " . $hostnamestring[0]." " . $hostnamestring[2]." " . $hostnamestring[-1] . " ";
|
||||
}
|
||||
elsif ($hostname =~ /freedom/) {
|
||||
$platformstring = "\nthat was compiled " . $modestring . "on: " . $hostnamestring[0]." " . $hostnamestring[2]." " . $hostnamestring[-1] . " ";
|
||||
} elsif ($hostname =~ /emu/) {
|
||||
$platformstring = "\nthat was compiled " . $modestring . "on: " . $hostnamestring[0]." " . $hostnamestring[2] . " " . $hostnamestring[-2] . " ";
|
||||
} elsif ($hostname =~ /fred/) {
|
||||
$platformstring = "\nthat was compiled " . $modestring . "on: " . $hostnamestring[0]." " . $hostnamestring[2] . " " . $hostnamestring[-1] . " ";
|
||||
} else {
|
||||
$_ = $hostnamestring[2];
|
||||
my $pos = index $_, '-';
|
||||
my $os = substr $_, 0, $pos;
|
||||
$platformstring = "\nthat was compiled " . $modestring . "on: " . $hostnamestring[0] . " " . $os . " " . $hostnamestring[-2] . " ";
|
||||
}
|
||||
|
||||
|
||||
my $mappingstring = "";
|
||||
#no mappingstring for 1.6. Put it back for 1.8.
|
||||
#$cmd = "grep \"Default API Mapping:\" $indirectory/lib/libhdf5.settings";
|
||||
#$_ = `$cmd`;
|
||||
#s/Default API Mapping://;
|
||||
#s/^\s+//;
|
||||
#chomp;
|
||||
#if (/v\d+/) {
|
||||
# s/v//;
|
||||
# s/(\d)(\d)/$1\.$2/g;
|
||||
# $mappingstring = "using the default\nAPI mapping for VERSION ".$_.".";
|
||||
#
|
||||
#}
|
||||
print OUTFILE $versionstring;
|
||||
print OUTFILE $platformstring."\n\n";
|
||||
#print OUTFILE $mappingstring;
|
||||
|
||||
#if ($hostname eq "loyalty.hdfgroup.uiuc.edu" || $hostname eq "freedom.hdfgroup.uiuc.edu") {
|
||||
# print OUTFILE " It includes the C APIs,\nbuilt using the following ";
|
||||
# print OUTFILE "compilers:\n\n";
|
||||
#}
|
||||
#else {
|
||||
if ($linktype eq "shared" && !($hostname =~ /32/)) {
|
||||
print OUTFILE "\n\nIt includes the C, C++, F90 and Java APIs, built using the following\n";
|
||||
} else {
|
||||
print OUTFILE "\n\nIt includes the C, C++, and F90 APIs, built using the following\n";
|
||||
}
|
||||
print OUTFILE "compilers:\n\n";
|
||||
#}
|
||||
|
||||
# Only the gcc compiler version is in libhdf5.settings, so for now I looked
|
||||
# up the versions and hardcoded them here. We will put them in libhdf5.settings
|
||||
# for the next release.
|
||||
if ($indirectory =~ /gnu484/) {
|
||||
print OUTFILE "\tgcc, g++, and gfortran 4.8.4\n\n";
|
||||
} elsif ($hostname =~ /jam/ || $hostname =~ /koala/) {
|
||||
print OUTFILE "\tgcc, g++, and gfortran 4.1.2\n\n";
|
||||
} elsif ($hostname =~ /platypus/) {
|
||||
print OUTFILE "\tgcc, g++, and gfortran 4.4.7\n\n";
|
||||
if ($linktype eq "shared" && !($hostname =~ /32/)) {
|
||||
print OUTFILE "\tjava 1.8.0_51\n\n";
|
||||
}
|
||||
} elsif ($hostname =~ /moohan/) {
|
||||
print OUTFILE "\tgcc, g++, and gfortran 4.8.5\n\n";
|
||||
if ($linktype eq "shared" && !($hostname =~ /32/)) {
|
||||
print OUTFILE "\tjava 1.8.0_51\n\n";
|
||||
}
|
||||
} elsif ($hostname =~ /emu/) {
|
||||
print OUTFILE "\tSun C and C++ 5.12, Sun Fortran 95 8.6\n\n";
|
||||
} elsif ($hostname =~ /loyalty/ || $hostname =~ /freedom/) {
|
||||
print OUTFILE "\tgcc, g++, and gfortran 4.6.1\n\n";
|
||||
} elsif ($hostname =~ /duck/) {
|
||||
print OUTFILE "\tApple clang/clang++ 3.0 from Xcode 4.6.1 and gfortran 4.8.2\n\n";
|
||||
} elsif ($hostname =~ /kite/) {
|
||||
print OUTFILE "\tApple clang/clang++ 5.1 from Xcode 5.0.2 and gfortran 4.8.2\n\n";
|
||||
} elsif ($hostname =~ /quail/) {
|
||||
print OUTFILE "\tgcc, g++ 5.1 from Xcode 5.1 and gfortran 4.8.2\n\n";
|
||||
} elsif ($hostname =~ /osx1010test/) {
|
||||
print OUTFILE "\tgcc, g++ 5.1 from Xcode 5.1 and gfortran 4.8.2\n\n";
|
||||
}
|
||||
|
||||
print OUTFILE $section2;
|
||||
|
||||
print OUTFILE $section3;
|
||||
|
||||
print OUTFILE $section4;
|
||||
|
182
bin/pkgscrpts/makeOuterREADME.pl
Executable file
182
bin/pkgscrpts/makeOuterREADME.pl
Executable file
@ -0,0 +1,182 @@
|
||||
#!/usr/bin/perl
|
||||
# makeOuterREADME.pl
|
||||
|
||||
# Copyright by The HDF Group.
|
||||
# All rights reserved.
|
||||
#
|
||||
# This file is part of HDF4. The full HDF4 copyright notice, including
|
||||
# terms governing use, modification, and redistribution, is contained in
|
||||
# the files COPYING and Copyright.html. COPYING can be found at the root
|
||||
# of the source code distribution tree; Copyright.html can be found at the
|
||||
# root level of an installed copy of the electronic HDF4 document set and
|
||||
# is linked from the top-level documents page. It can also be found at
|
||||
# http://hdfgroup.org/HDF4/doc/Copyright.html. If you do not have
|
||||
# access to either file, you may request a copy from help@hdfgroup.org.
|
||||
#
|
||||
|
||||
use warnings;
|
||||
use strict;
|
||||
|
||||
my $indirectory = ".";
|
||||
$indirectory = shift;
|
||||
|
||||
my $outdirectory = ".";
|
||||
$outdirectory = shift;
|
||||
|
||||
my $outsubdir = shift;
|
||||
|
||||
my $version;
|
||||
|
||||
my $outfile = "$outdirectory/$outsubdir/README";
|
||||
open OUTFILE, ">$outfile";
|
||||
my $hostname="";
|
||||
my $cmd = "grep \"HDF5 Version\" $indirectory-static/lib/libhdf5.settings";
|
||||
$_ = `$cmd`;
|
||||
print OUTFILE $_, "\n";
|
||||
s/HDF5 Version://;
|
||||
s/^\s+//;
|
||||
chomp;
|
||||
$version = $_;
|
||||
#print OUTFILE $_, "\n";
|
||||
my $versionstring= "This directory contains the precompiled HDF5 $version binary distribution\n(include files, libraries, utilities) for";
|
||||
|
||||
$cmd = "grep \"Uname information:\" $indirectory-static/lib/libhdf5.settings";
|
||||
$_ = `$cmd`;
|
||||
s/Uname information://;
|
||||
s/^\s+//;
|
||||
chomp;
|
||||
print "String to work with is $_\n";
|
||||
my $platformstring = "";
|
||||
my $hostnamestring = $_;
|
||||
my @hostnamestring = split / /, $hostnamestring;
|
||||
$platformstring = "$hostnamestring[0] ";
|
||||
if ($indirectory =~ /jam/ || $indirectory =~ /koala/) {
|
||||
$hostnamestring = $hostnamestring[2];
|
||||
my $pos = index $hostnamestring, "-";
|
||||
if ($pos > 0) {
|
||||
$platformstring .= substr $hostnamestring, 0, $pos;
|
||||
} else {
|
||||
$platformstring .= $hostnamestring[2];
|
||||
}
|
||||
$platformstring .= " ".$hostnamestring[-3];
|
||||
} elsif ($indirectory =~ /linew/) {
|
||||
$platformstring .= "$hostnamestring[2] $hostnamestring[-2]";
|
||||
} else {
|
||||
$platformstring .= "$hostnamestring[2] $hostnamestring[-1]";
|
||||
}
|
||||
|
||||
print OUTFILE $versionstring." ".$platformstring.":\n\n";
|
||||
my $line1;
|
||||
my $line3;
|
||||
my $line5;
|
||||
my $compilerstring="";
|
||||
my $compilerstring1="";
|
||||
my $compilerstring2="";
|
||||
|
||||
|
||||
print $indirectory, "\n";
|
||||
|
||||
if ($indirectory =~ /ostrich/) {
|
||||
# $line1 = " hdf5-$version-$outsubdir-16API.tar.gz - Includes C, C++, F90 APIs (using\n";
|
||||
$line3 = " hdf5-$version-$outsubdir-static.tar.gz - Includes C, C++, F90 APIs (using";
|
||||
$line5 = " hdf5-$version-$outsubdir-shared.tar.gz - Includes C, C++, F90 APIs (using";
|
||||
$compilerstring = " gcc, g++, and gfortran 4.4.7)";
|
||||
}
|
||||
elsif ($indirectory =~ /platypus/) {
|
||||
# $line1 = " hdf5-$version-$outsubdir-16API.tar.gz - Includes C, C++, F90 APIs (using\n";
|
||||
$line3 = " hdf5-$version-$outsubdir-static.tar.gz - Includes C, C++, F90 APIs (using";
|
||||
$compilerstring1 = " gcc, g++, and gfortran 4.4.7)\n";
|
||||
if ($indirectory =~ /32/) {
|
||||
$line5 = " hdf5-$version-$outsubdir-shared.tar.gz - Includes C, C++, F90 and Java APIs (using";
|
||||
$compilerstring2 = " gcc, g++, and gfortran 4.4.7)\n";
|
||||
} else {
|
||||
$line5 = " hdf5-$version-$outsubdir-shared.tar.gz - Includes C, C++, F90 and Java APIs (using";
|
||||
$compilerstring2 = " gcc, g++, and gfortran 4.4.7 and java 1.8.0_51)\n";
|
||||
}
|
||||
}
|
||||
elsif ($indirectory =~ /moohan/) {
|
||||
# $line1 = " hdf5-$version-$outsubdir-16API.tar.gz - Includes C, C++, F90 APIs (using\n";
|
||||
$line3 = " hdf5-$version-$outsubdir-static.tar.gz - Includes C, C++, F90 APIs (using";
|
||||
$compilerstring1 = " gcc, g++, and gfortran 4.8.5)\n";
|
||||
if ($indirectory =~ /32/) {
|
||||
$line5 = " hdf5-$version-$outsubdir-shared.tar.gz - Includes C, C++, F90 and Java APIs (using";
|
||||
$compilerstring2 = " gcc, g++, and gfortran 4.4.7)\n";
|
||||
} else {
|
||||
$line5 = " hdf5-$version-$outsubdir-shared.tar.gz - Includes C, C++, F90 and Java APIs (using";
|
||||
$compilerstring2 = " gcc, g++, and gfortran 4.8.5 and java 1.8.0_51)\n";
|
||||
}
|
||||
}
|
||||
elsif ($indirectory =~ /emu/) {
|
||||
# $line1 = " hdf5-$version-$outsubdir-16API.tar.gz - Includes C, C++, F90 APIs (using\n";
|
||||
$line3 = " hdf5-$version-$outsubdir-static.tar.gz - Includes C, C++, F90 APIs (using";
|
||||
$line5 = " hdf5-$version-$outsubdir-shared.tar.gz - Includes C, C++, F90 APIs (using";
|
||||
$compilerstring = " Sun C and C++ 5.12, Sun Fortran 95 8.6)\n";
|
||||
}
|
||||
elsif ($indirectory =~ /kite/) {
|
||||
$line3 = " hfd5-$version-$outsubdir-static.tar.gz - Includes C, C++, F90 APIs (using";
|
||||
$line5 = " hfd5-$version-$outsubdir-shared.tar.gz - Includes C, C++, F90 APIs (using";
|
||||
$compilerstring = " Apple clang/clang++ 5.1 from Xcode 5.0.2,
|
||||
gfortran 4.8.2)\n";
|
||||
}
|
||||
elsif ($indirectory =~ /quail/) {
|
||||
$line3 = " hfd5-$version-$outsubdir-static.tar.gz - Includes C, C++, F90 APIs (using";
|
||||
$line5 = " hfd5-$version-$outsubdir-shared.tar.gz - Includes C, C++, F90 APIs (using";
|
||||
$compilerstring = " Apple clang/clang++ 6.0 from Xcode 5.1,
|
||||
gfortran 4.9.2)\n";
|
||||
}
|
||||
elsif ($indirectory =~ /osx1010test/) {
|
||||
$line3 = " hdf5-$version-$outsubdir-static.tar.gz - Includes C, C++, F90 APIs (using";
|
||||
$line5 = " hdf5-$version-$outsubdir-shared.tar.gz - Includes C, C++, F90 APIs (using";
|
||||
$compilerstring = " Apple clang/clang++ 6.1 from Xcode 6.1,
|
||||
gfortran 4.9.2)\n";
|
||||
}
|
||||
elsif ($indirectory =~ /osx1011test/) {
|
||||
$line3 = " hdf5-$version-$outsubdir-static.tar.gz - Includes C, C++, F90 APIs (using";
|
||||
$line5 = " hdf5-$version-$outsubdir-shared.tar.gz - Includes C, C++, F90 APIs (using";
|
||||
$compilerstring = " Apple clang/clang++ 7.0.2 from Xcode 7.0,
|
||||
gfortran 5.2.0)\n";
|
||||
}
|
||||
|
||||
print OUTFILE $line3;
|
||||
print OUTFILE $compilerstring1."\n";
|
||||
if ($line5 ne "") {
|
||||
print OUTFILE $line5;
|
||||
print OUTFILE $compilerstring2."\n";
|
||||
}
|
||||
#elsif ($indirectory =~ /-16API/) {
|
||||
# print OUTFILE $line1;
|
||||
# print OUTFILE $compilerstring;
|
||||
# print OUTFILE " USES THE VERSION 1.6 DEFAULT API\n";
|
||||
# print OUTFILE " MAPPING.\n\n";
|
||||
#}
|
||||
|
||||
print OUTFILE " utilities/ - Directory containing the compiled HDF5 utilities.\n";
|
||||
print OUTFILE " These utilities are STATICALLY linked and will run as is.\n\n";
|
||||
#print OUTFILE " The tools can be downloaded separately, or ALL in one\n";
|
||||
#print OUTFILE " compressed file (5-$version-$outsubdir-static-util.tar.gz).\n\n";
|
||||
print OUTFILE "\n";
|
||||
print OUTFILE "To obtain the HDF5 distribution, 'unzip' and 'untar' the distribution\n";
|
||||
print OUTFILE "file:\n\n";
|
||||
print OUTFILE " gzip -cd <gz file from above> | tar xvf -\n";
|
||||
|
||||
|
||||
#$cmd = "grep \"Configured by:\" $indirectory/$key-static/lib/libhdf5.settings";
|
||||
#$_ = `$cmd`;
|
||||
#s/Configured by://;
|
||||
#s/^\s+//;
|
||||
#print OUTFILE $_;
|
||||
#chomp;
|
||||
#my $hostnamestring = $_;
|
||||
#s/(^\w+)(\s)(\S+)/$1/;
|
||||
#s/(^.*)(-)(.*)(200[7-8])(.*)(\s)(\S+)/$1 $5/;
|
||||
#my $platformstring = $_ . ":\n\n";
|
||||
#my @hostnamestring = split /@/, $hostnamestring;
|
||||
#print "Size of hostnamestring is ", scalar @hostnamestring, "\n";
|
||||
#print $hostnamestring[0] . "\t" . $hostnamestring[2]."\t".$hostnamestring[19]."\n";
|
||||
#my $platformstring = $hostnamestring[1].":\n\n";
|
||||
#$hostnamestring = $hostnamestring[1];
|
||||
#my $pos = index $hostnamestring, ".";
|
||||
#if ($pos > 0) {
|
||||
# @hostnamestring = split /\./, $hostnamestring;
|
||||
# $platformstring = $hostnamestring[0].":\n\n";
|
||||
#}
|
Loading…
Reference in New Issue
Block a user