diff --git a/config/gnu-cxxflags b/config/gnu-cxxflags
index 9ae38f6270..73f49bac98 100644
--- a/config/gnu-cxxflags
+++ b/config/gnu-cxxflags
@@ -306,9 +306,10 @@ fi
 
 # Version-specific g++ flags
 
-
-    # Append more extra warning flags that only gcc 4.9+ know about
-    -Wopenmp-simd"
+# This flag was left behind when moving warnings flags to common files for 
+# both autotools and CMake.
+#    # Append more extra warning flags that only gcc 4.9+ know about
+#    -Wopenmp-simd"
 
 # Clear cxx info if no flags set
 if test "X$cxx_flags_set" = "X"; then
diff --git a/config/gnu-fflags b/config/gnu-fflags
index 28591584b3..f58f10cec8 100644
--- a/config/gnu-fflags
+++ b/config/gnu-fflags
@@ -139,7 +139,7 @@ if test "X-gfortran" = "X-$f9x_vendor"; then
     # General #
     ###########
 
-    H5_FCFLAGS="$H5_CFLAGS $(load_gnu_arguments gfort-general)"
+    H5_FCFLAGS="$H5_FCFLAGS $(load_gnu_arguments gfort-general)"
 
     #############################
     # Version-specific warnings #