Modifications based on review comments from pull request.

Made changes according to review comments and discussion with Allen.
This commit is contained in:
Vailin Choi 2017-04-19 22:51:39 -05:00
parent 22d54edf90
commit ddd8cf0e1c
4 changed files with 110 additions and 99 deletions

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@ -1478,6 +1478,7 @@
./tools/test/misc/testfiles/h5clear_sec2_v3.h5 ./tools/test/misc/testfiles/h5clear_sec2_v3.h5
./tools/test/misc/testfiles/latest_h5clear_log_v3.h5 ./tools/test/misc/testfiles/latest_h5clear_log_v3.h5
./tools/test/misc/testfiles/latest_h5clear_sec2_v3.h5 ./tools/test/misc/testfiles/latest_h5clear_sec2_v3.h5
./tools/test/misc/testfiles/mod_h5clear_mdc_image.h5
./tools/test/misc/testfiles/h5mkgrp_help.txt ./tools/test/misc/testfiles/h5mkgrp_help.txt
./tools/test/misc/testfiles/h5mkgrp_version.txt.in ./tools/test/misc/testfiles/h5mkgrp_version.txt.in
./tools/test/misc/h5perf_gentest.c ./tools/test/misc/h5perf_gentest.c

View File

@ -140,7 +140,7 @@ error:
* status_flags properly so users can open the files afterwards. * status_flags properly so users can open the files afterwards.
* *
* Return: Success: 0 * Return: Success: 0
* Failure: 1 * Failure: 1
* *
* Programmer: Vailin Choi; July 2013 * Programmer: Vailin Choi; July 2013
* *
@ -165,65 +165,65 @@ main(void)
/* Create a copy of the file access property list */ /* Create a copy of the file access property list */
if((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) if((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0)
goto error; goto error;
/* Copy the file access property list */ /* Copy the file access property list */
if((new_fapl = H5Pcopy(fapl)) < 0) if((new_fapl = H5Pcopy(fapl)) < 0)
goto error; goto error;
/* Set to latest library format */ /* Set to latest library format */
if(H5Pset_libver_bounds(new_fapl, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0) if(H5Pset_libver_bounds(new_fapl, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0)
goto error; goto error;
/* Files created within this for loop will have v3 superblock and nonzero status_flags */ /* Files created within this for loop will have v3 superblock and nonzero status_flags */
for(new_format = FALSE; new_format <= TRUE; new_format++) { for(new_format = FALSE; new_format <= TRUE; new_format++) {
hid_t fapl2, my_fapl; /* File access property lists */ hid_t fapl2, my_fapl; /* File access property lists */
/* Set to use the appropriate file access property list */ /* Set to use the appropriate file access property list */
if(new_format) if(new_format)
fapl2 = new_fapl; fapl2 = new_fapl;
else else
fapl2 = fapl; fapl2 = fapl;
/* /*
* Create a sec2 file * Create a sec2 file
*/ */
if((my_fapl = H5Pcopy(fapl2)) < 0) if((my_fapl = H5Pcopy(fapl2)) < 0)
goto error; goto error;
/* Create the file */ /* Create the file */
sprintf(fname, "%s%s", new_format? "latest_":"", FILENAME[0]); sprintf(fname, "%s%s", new_format? "latest_":"", FILENAME[0]);
if((fid = H5Fcreate(fname, H5F_ACC_TRUNC | (new_format ? 0 : H5F_ACC_SWMR_WRITE), H5P_DEFAULT, my_fapl)) < 0) if((fid = H5Fcreate(fname, H5F_ACC_TRUNC | (new_format ? 0 : H5F_ACC_SWMR_WRITE), H5P_DEFAULT, my_fapl)) < 0)
goto error; goto error;
/* Flush the file */ /* Flush the file */
if(H5Fflush(fid, H5F_SCOPE_GLOBAL) < 0) if(H5Fflush(fid, H5F_SCOPE_GLOBAL) < 0)
goto error; goto error;
/* Close the property list */ /* Close the property list */
if(H5Pclose(my_fapl) < 0) if(H5Pclose(my_fapl) < 0)
goto error; goto error;
/* /*
* Create a log file * Create a log file
*/ */
/* Create a copy of file access property list */ /* Create a copy of file access property list */
if((my_fapl = H5Pcopy(fapl2)) < 0) if((my_fapl = H5Pcopy(fapl2)) < 0)
goto error; goto error;
/* Setup the fapl for the log driver */ /* Setup the fapl for the log driver */
if(H5Pset_fapl_log(my_fapl, "append.log", (unsigned long long)H5FD_LOG_ALL, (size_t)(4 * KB)) < 0) if(H5Pset_fapl_log(my_fapl, "append.log", (unsigned long long)H5FD_LOG_ALL, (size_t)(4 * KB)) < 0)
goto error; goto error;
/* Create the file */ /* Create the file */
sprintf(fname, "%s%s", new_format? "latest_":"", FILENAME[1]); sprintf(fname, "%s%s", new_format? "latest_":"", FILENAME[1]);
if((fid = H5Fcreate(fname, H5F_ACC_TRUNC | (new_format ? 0 : H5F_ACC_SWMR_WRITE), H5P_DEFAULT, my_fapl)) < 0) if((fid = H5Fcreate(fname, H5F_ACC_TRUNC | (new_format ? 0 : H5F_ACC_SWMR_WRITE), H5P_DEFAULT, my_fapl)) < 0)
goto error; goto error;
/* Flush the file */ /* Flush the file */
if(H5Fflush(fid, H5F_SCOPE_GLOBAL) < 0) if(H5Fflush(fid, H5F_SCOPE_GLOBAL) < 0)
goto error; goto error;
/* Close the property list */ /* Close the property list */
if(H5Pclose(my_fapl) < 0) if(H5Pclose(my_fapl) < 0)
goto error; goto error;
} /* end for */ } /* end for */
@ -231,38 +231,38 @@ main(void)
* Create a sec2 file with v0 superblock but nonzero status_flags * Create a sec2 file with v0 superblock but nonzero status_flags
*/ */
if((fid = H5Fcreate(FILENAME[2], H5F_ACC_TRUNC, H5P_DEFAULT, fapl)) < 0) if((fid = H5Fcreate(FILENAME[2], H5F_ACC_TRUNC, H5P_DEFAULT, fapl)) < 0)
goto error; goto error;
/* Flush the file */ /* Flush the file */
if(H5Fflush(fid, H5F_SCOPE_GLOBAL) < 0) if(H5Fflush(fid, H5F_SCOPE_GLOBAL) < 0)
goto error; goto error;
/* /*
* Create a sec2 file with v2 superblock but nonzero status_flags * Create a sec2 file with v2 superblock but nonzero status_flags
*/ */
if((fcpl = H5Pcreate(H5P_FILE_CREATE)) < 0) if((fcpl = H5Pcreate(H5P_FILE_CREATE)) < 0)
goto error; goto error;
if(H5Pset_shared_mesg_nindexes(fcpl, 1) < 0) if(H5Pset_shared_mesg_nindexes(fcpl, 1) < 0)
goto error; goto error;
if(H5Pset_shared_mesg_index(fcpl, 0, H5O_SHMESG_DTYPE_FLAG, 50) < 0) if(H5Pset_shared_mesg_index(fcpl, 0, H5O_SHMESG_DTYPE_FLAG, 50) < 0)
goto error; goto error;
if((fid = H5Fcreate(FILENAME[3], H5F_ACC_TRUNC, fcpl, fapl)) < 0) if((fid = H5Fcreate(FILENAME[3], H5F_ACC_TRUNC, fcpl, fapl)) < 0)
goto error; goto error;
/* Flush the file */ /* Flush the file */
if(H5Fflush(fid, H5F_SCOPE_GLOBAL) < 0) if(H5Fflush(fid, H5F_SCOPE_GLOBAL) < 0)
goto error; goto error;
/* Close the property lists */ /* Close the property lists */
if(H5Pclose(fapl) < 0) if(H5Pclose(fapl) < 0)
goto error; goto error;
if(H5Pclose(new_fapl) < 0) if(H5Pclose(new_fapl) < 0)
goto error; goto error;
if(H5Pclose(fcpl) < 0) if(H5Pclose(fcpl) < 0)
goto error; goto error;
fflush(stdout); fflush(stdout);
fflush(stderr); fflush(stderr);

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@ -73,6 +73,7 @@ $SRC_H5CLEAR_TESTFILES/h5clear_log_v3.h5
$SRC_H5CLEAR_TESTFILES/latest_h5clear_log_v3.h5 $SRC_H5CLEAR_TESTFILES/latest_h5clear_log_v3.h5
$SRC_H5CLEAR_TESTFILES/latest_h5clear_sec2_v3.h5 $SRC_H5CLEAR_TESTFILES/latest_h5clear_sec2_v3.h5
$SRC_H5CLEAR_TESTFILES/h5clear_mdc_image.h5 $SRC_H5CLEAR_TESTFILES/h5clear_mdc_image.h5
$SRC_H5CLEAR_TESTFILES/mod_h5clear_mdc_image.h5
" "
COPY_TESTFILES_TO_TESTDIR() COPY_TESTFILES_TO_TESTDIR()
@ -122,8 +123,8 @@ CLEAN_TESTFILES_AND_TESTDIR()
# beginning with the word "Testing". # beginning with the word "Testing".
# #
TESTING() { TESTING() {
SPACES=" " SPACES=" "
echo "Testing $* $SPACES" | cut -c1-74 | tr -d '\012' echo "Testing $* $SPACES" | cut -c1-70 | tr -d '\012'
} }
# $1 is the expected output # $1 is the expected output
@ -162,6 +163,7 @@ TOOLTEST_OUT() {
# Run test. # Run test.
TESTING $H5CLEAR $option1 $option2 $fname TESTING $H5CLEAR $option1 $option2 $fname
( (
cd $TESTDIR
$RUNSERIAL $H5CLEAR_BIN $option1 $option2 $fname $RUNSERIAL $H5CLEAR_BIN $option1 $option2 $fname
) >$actual 2>$actual_err ) >$actual 2>$actual_err
cp $actual $actual_sav cp $actual $actual_sav
@ -182,7 +184,10 @@ TOOLTEST_OUT() {
OPEN_CHK() { OPEN_CHK() {
fname=$1 fname=$1
expected=$2 expected=$2
$OPENCHK_BIN $fname 2>/dev/null (
cd $TESTDIR
$OPENCHK_BIN $fname 2>/dev/null
)
actual=$? actual=$?
if test $actual -ne $expected; then if test $actual -ne $expected; then
echo "Unexpected return from $OPENCHK" echo "Unexpected return from $OPENCHK"
@ -202,9 +207,11 @@ TOOLTEST() {
ret_expected=$4 ret_expected=$4
# #
TESTING $H5CLEAR $option1 $option2 $fname TESTING $H5CLEAR $option1 $option2 $fname
fname=$1
# h5clear $option1 $option2 $fname # h5clear $option1 $option2 $fname
$RUNSERIAL $H5CLEAR_BIN $option1 $option2 $fname 2>/dev/null 1>/dev/null (
cd $TESTDIR
$RUNSERIAL $H5CLEAR_BIN $option1 $option2 $fname 2>/dev/null 1>/dev/null
)
if test $? -ne $ret_expected; then if test $? -ne $ret_expected; then
echo "*FAILED*" echo "*FAILED*"
nerrors=`expr $nerrors + 1` nerrors=`expr $nerrors + 1`
@ -220,92 +227,95 @@ TOOLTEST() {
############################################################################## ##############################################################################
# prepare for testing # prepare for testing
COPY_TESTFILES_TO_TESTDIR COPY_TESTFILES_TO_TESTDIR
# For Cmake
$CP -f $TESTDIR/h5clear_sec2_v0.h5 $TESTDIR/orig_h5clear_sec2_v0.h5
$CP -f $TESTDIR/h5clear_sec2_v2.h5 $TESTDIR/orig_h5clear_sec2_v2.h5
$CP -f $TESTDIR/h5clear_sec2_v3.h5 $TESTDIR/orig_h5clear_sec2_v3.h5
# #
# #
# #
# The following are tests to verify the expected output from h5clear # The following are tests to verify the expected output from h5clear
# "h5clear -h" # "h5clear -h"
# "h5clear" (no options, no file) # "h5clear" (no options, no file)
# "h5clear junk.h5" (no options, nonexisting file) # "h5clear junk.h5" (no options, nonexisting file)
# "h5clear h5clear_sec2_v3.h5" (no options, existing file) # "h5clear orig_h5clear_sec2_v3.h5" (no options, existing file)
# "h5clear -m" (valid 1 option, no file) # "h5clear -m" (valid 1 option, no file)
# "h5clear -s junk.h5" (valid 1 option, nonexisting file) # "h5clear -s junk.h5" (valid 1 option, nonexisting file)
# "h5clear -m -s" (valid 2 options, no file) # "h5clear -m -s" (valid 2 options, no file)
# "h5clear -m -s junk.h5" (valid 2 options, nonexisting file) # "h5clear -m -s junk.h5" (valid 2 options, nonexisting file)
# "h5clear -m h5clear_sec2_v2.h5" (valid 1 option, existing file, no cache image) # "h5clear -m orig_h5clear_sec2_v2.h5" (valid 1 option, existing file, no cache image)
# "h5clear -s -m h5clear_sec2_v0.h5" (valid 2 options, existing file, no cache image) # "h5clear -s -m orig_h5clear_sec2_v0.h5" (valid 2 options, existing file, no cache image)
TOOLTEST_OUT "" -h "" h5clear_usage.ddl TOOLTEST_OUT "" -h "" h5clear_usage.ddl
TOOLTEST_OUT "" "" "" h5clear_usage.ddl TOOLTEST_OUT "" "" "" h5clear_usage.ddl
TOOLTEST_OUT junk.h5 "" "" h5clear_usage.ddl TOOLTEST_OUT junk.h5 "" "" h5clear_usage.ddl
TOOLTEST_OUT $TESTDIR/h5clear_sec2_v3.h5 "" "" h5clear_usage.ddl TOOLTEST_OUT orig_h5clear_sec2_v3.h5 "" "" h5clear_usage.ddl
TOOLTEST_OUT "" -m "" h5clear_missing_file.ddl TOOLTEST_OUT "" -m "" h5clear_missing_file.ddl
TOOLTEST_OUT junk.h5 -s "" h5clear_open_fail.ddl TOOLTEST_OUT junk.h5 -s "" h5clear_open_fail.ddl
TOOLTEST_OUT "" -m -s h5clear_missing_file.ddl TOOLTEST_OUT "" -m -s h5clear_missing_file.ddl
TOOLTEST_OUT junk.h5 -m -s h5clear_open_fail.ddl TOOLTEST_OUT junk.h5 -m -s h5clear_open_fail.ddl
TOOLTEST_OUT $TESTDIR/h5clear_sec2_v2.h5 -m "" h5clear_no_mdc_image.ddl TOOLTEST_OUT orig_h5clear_sec2_v2.h5 -m "" h5clear_no_mdc_image.ddl
TOOLTEST_OUT $TESTDIR/h5clear_sec2_v0.h5 -s -m h5clear_no_mdc_image.ddl TOOLTEST_OUT orig_h5clear_sec2_v0.h5 -s -m h5clear_no_mdc_image.ddl
# #
# #
# #
# The following are tests to verify the expected exit code from h5clear: # The following are tests to verify the expected exit code from h5clear:
# "h5clear -m h5clear_mdc_image.h5" (valid option, existing file, succeed exit code)
# "h5clear --vers" (valid option, version #, succeed exit code)
# "h5clear -k" (invalid 1 option, no file, fail exit code) # "h5clear -k" (invalid 1 option, no file, fail exit code)
# "h5clear -k junk.h5" (invalid 1 option, nonexisting file, fail exit code) # "h5clear -k junk.h5" (invalid 1 option, nonexisting file, fail exit code)
# "h5clear -l h5clear_sec2_v2.h5" (invalid 1 option, existing file, fail exit code) # "h5clear -l h5clear_sec2_v2.h5" (invalid 1 option, existing file, fail exit code)
# "h5clear -m -k" (valid/invalid 2 options, nofile, fail exit code) # "h5clear -m -k" (valid/invalid 2 options, nofile, fail exit code)
# "h5clear -l -m" (invalid/valid 2 options, nofile, fail exit code) # "h5clear -l -m" (invalid/valid 2 options, nofile, fail exit code)
# "h5clear -m -k junk.h5" (valid/invalid 2 options, nonexisting file, fail exit code) # "h5clear -m -l junk.h5" (valid/invalid 2 options, nonexisting file, fail exit code)
# "h5clear -l -m junk.h5" (invalid/valid 2 options, nonexisting file, fail exit code) # "h5clear -l -m junk.h5" (invalid/valid 2 options, nonexisting file, fail exit code)
# "h5clear -m -k h5clear_sec2_v0.h5" (valid/invalid 2 options, existing file, fail exit code) # "h5clear -m -l h5clear_sec2_v0.h5" (valid/invalid 2 options, existing file, fail exit code)
# "h5clear -l -m h5clear_sec2_v0.h5" (invalid/valid 2 options, existing file, fail exit code) # "h5clear -l -m h5clear_sec2_v0.h5" (invalid/valid 2 options, existing file, fail exit code)
TOOLTEST h5clear_mdc_image.h5 -m "" $SUCCEED
TOOLTEST "" --vers "" $SUCCEED
TOOLTEST "" -k "" $FAIL TOOLTEST "" -k "" $FAIL
TOOLTEST junk.h5 -k "" $FAIL TOOLTEST junk.h5 -k "" $FAIL
TOOLTEST h5clear_sec2_v2.h5 -l "" $FAIL TOOLTEST h5clear_sec2_v2.h5 -l "" $FAIL
TOOLTEST "" -m -k $FAIL TOOLTEST "" -m -k $FAIL
TOOLTEST "" -l -m $FAIL TOOLTEST "" -l -m $FAIL
TOOLTEST junk.h5 -m -k $FAIL TOOLTEST junk.h5 -m -l $FAIL
TOOLTEST junk.h5 -l -m $FAIL TOOLTEST junk.h5 -l -m $FAIL
TOOLTEST $TESTDIR/h5clear_sec2_v0.h5 -m -k $FAIL TOOLTEST h5clear_sec2_v0.h5 -m -l $FAIL
TOOLTEST $TESTDIR/h5clear_sec2_v0.h5 -l -m $FAIL TOOLTEST h5clear_sec2_v0.h5 -l -m $FAIL
#
# "h5clear --vers" (valid option, version #, succeed exit code)
# "h5clear -m h5clear_mdc_image.h5" (valid option, existing file, succeed exit code)
TOOLTEST "" --vers "" $SUCCEED
TOOLTEST $TESTDIR/h5clear_mdc_image.h5 -m "" $SUCCEED
# #
# #
# #
# h5clear_mdc_image.h5 already has cache image removed earlier, verify the expected warning from h5clear: # h5clear_mdc_image.h5 already has cache image removed earlier, verify the expected warning from h5clear:
TOOLTEST_OUT $TESTDIR/h5clear_mdc_image.h5 -m "" h5clear_no_mdc_image.ddl TOOLTEST_OUT mod_h5clear_mdc_image.h5 -m "" h5clear_no_mdc_image.ddl
TOOLTEST_OUT $TESTDIR/h5clear_mdc_image.h5 -s -m h5clear_no_mdc_image.ddl TOOLTEST_OUT mod_h5clear_mdc_image.h5 -s -m h5clear_no_mdc_image.ddl
# #
# #
# #
# The following are tests to verify the status_flags field is cleared properly: # The following are tests to verify the status_flags field is cleared properly:
OPEN_CHK $TESTDIR/h5clear_sec2_v3.h5 $FAIL OPEN_CHK h5clear_sec2_v3.h5 $FAIL
TOOLTEST $TESTDIR/h5clear_sec2_v3.h5 -s "" $SUCCEED TOOLTEST h5clear_sec2_v3.h5 -s "" $SUCCEED
OPEN_CHK $TESTDIR/h5clear_sec2_v3.h5 $SUCCEED OPEN_CHK h5clear_sec2_v3.h5 $SUCCEED
# #
OPEN_CHK $TESTDIR/h5clear_log_v3.h5 $FAIL OPEN_CHK h5clear_log_v3.h5 $FAIL
TOOLTEST $TESTDIR/h5clear_log_v3.h5 -s "" $SUCCEED TOOLTEST h5clear_log_v3.h5 -s "" $SUCCEED
OPEN_CHK $TESTDIR/h5clear_log_v3.h5 $SUCCEED OPEN_CHK h5clear_log_v3.h5 $SUCCEED
# #
OPEN_CHK $TESTDIR/latest_h5clear_sec2_v3.h5 $FAIL OPEN_CHK latest_h5clear_sec2_v3.h5 $FAIL
TOOLTEST $TESTDIR/latest_h5clear_sec2_v3.h5 -s "" $SUCCEED TOOLTEST latest_h5clear_sec2_v3.h5 -s "" $SUCCEED
OPEN_CHK $TESTDIR/latest_h5clear_sec2_v3.h5 $SUCCEED OPEN_CHK latest_h5clear_sec2_v3.h5 $SUCCEED
# #
OPEN_CHK $TESTDIR/latest_h5clear_log_v3.h5 $FAIL OPEN_CHK latest_h5clear_log_v3.h5 $FAIL
TOOLTEST $TESTDIR/latest_h5clear_log_v3.h5 -s "" $SUCCEED TOOLTEST latest_h5clear_log_v3.h5 -s "" $SUCCEED
OPEN_CHK $TESTDIR/latest_h5clear_log_v3.h5 $SUCCEED OPEN_CHK latest_h5clear_log_v3.h5 $SUCCEED
# #
# File open succeeds for the following 2 test files because the # File open succeeds for the following 2 test files because the
# library does not check status_flags for files with < v3 superblock: # library does not check status_flags for files with < v3 superblock:
OPEN_CHK $TESTDIR/h5clear_sec2_v0.h5 $SUCCEED OPEN_CHK h5clear_sec2_v0.h5 $SUCCEED
TOOLTEST $TESTDIR/h5clear_sec2_v0.h5 -s "" $SUCCEED TOOLTEST h5clear_sec2_v0.h5 -s "" $SUCCEED
OPEN_CHK $TESTDIR/h5clear_sec2_v0.h5 $SUCCEED OPEN_CHK h5clear_sec2_v0.h5 $SUCCEED
# #
OPEN_CHK $TESTDIR/h5clear_sec2_v2.h5 $SUCCEED OPEN_CHK h5clear_sec2_v2.h5 $SUCCEED
TOOLTEST $TESTDIR/h5clear_sec2_v2.h5 -s "" $SUCCEED TOOLTEST h5clear_sec2_v2.h5 -s "" $SUCCEED
OPEN_CHK $TESTDIR/h5clear_sec2_v2.h5 $SUCCEED OPEN_CHK h5clear_sec2_v2.h5 $SUCCEED
# #
# #
# #