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[svn-r13187] Fixed another issue with H5Ocopy when attributes had shared datatypes/
dataspaces that became un-shared in the destination. Tested on Windows, smirom, and kagiso. Need to extend objcopy test so that it checks that attributes are actually copied successfully.
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@ -965,12 +965,27 @@ H5O_attr_copy_file(H5F_t *file_src, const H5O_msg_class_t UNUSED *mesg_type,
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/* Copy the shared object from source to destination */
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if(H5O_copy_header_map(src_oloc, dst_oloc, dxpl_id, cpy_info, FALSE) < 0)
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HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, NULL, "unable to copy object")
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} /* end if */
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} else {
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/* If the datatype is not named, it may have been shared in the
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* source file's heap. Un-share it for now. We'll try to shared
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* it in the destination file below.
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*/
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if(H5O_msg_reset_share(H5O_DTYPE_ID, attr_dst->dt) < 0)
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HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, NULL, "unable to reset datatype sharing")
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}
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/* end if */
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/* Copy the dataspace for the attribute */
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attr_dst->ds = H5S_copy(attr_src->ds, FALSE);
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HDassert(attr_dst->ds);
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/* Reset the dataspace's sharing in the source file before trying to share
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* it in the destination.
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*/
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if(H5O_msg_reset_share(H5O_SDSPACE_ID, attr_dst->ds) < 0)
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HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, NULL, "unable to reset dataspace sharing")
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/* Try to share both the datatype and dataset. This does nothing if the
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* datatype is committed or sharing is disabled.
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*/
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@ -585,12 +585,12 @@ H5O_copy_header_real(const H5O_loc_t *oloc_src, H5O_loc_t *oloc_dst /*out */,
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current_pos = oh_dst->chunk[0].image;
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/* Copy the header. Most of this (number of messages, etc.) will be
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* overwritten when the header is flushed to disk, but later versions have
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* a magic number that isn't.
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/* Write the magic number for versions > 1 and skip the rest of the
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* header. This will be written when the header is flushed to disk.
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*/
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HDmemcpy(current_pos, oh_src->chunk[0].image,
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(size_t)(H5O_SIZEOF_HDR(oh_dst) - H5O_SIZEOF_CHKSUM_OH(oh_dst)));
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if(oh_dst->version > H5O_VERSION_1)
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HDmemcpy(current_pos, H5O_HDR_MAGIC, H5O_SIZEOF_MAGIC);
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current_pos += H5O_SIZEOF_HDR(oh_dst) - H5O_SIZEOF_CHKSUM_OH(oh_dst);
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/* Copy each message that wasn't dirtied above */
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25
src/H5Odbg.c
25
src/H5Odbg.c
@ -248,8 +248,7 @@ H5O_debug_real(H5F_t *f, hid_t dxpl_id, H5O_t *oh, haddr_t addr, FILE *stream, i
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unsigned i, chunkno;
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size_t mesg_total = 0, chunk_total = 0;
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int *sequence;
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void *(*decode)(H5F_t*, hid_t, const uint8_t*);
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herr_t (*debug)(H5F_t*, hid_t, const void*, FILE*, int, int)=NULL;
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const H5O_msg_class_t *debug_type; /* Type of message to use for callbacks */
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herr_t ret_value = SUCCEED;
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FUNC_ENTER_NOAPI(H5O_debug_real, FAIL)
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@ -412,22 +411,18 @@ H5O_debug_real(H5F_t *f, hid_t dxpl_id, H5O_t *oh, haddr_t addr, FILE *stream, i
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/* decode the message */
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if((oh->mesg[i].flags & H5O_MSG_FLAG_SHARED) && !H5O_NEW_SHARED(oh->mesg[i].type)) {
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decode = H5O_MSG_SHARED->decode;
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debug = H5O_MSG_SHARED->debug;
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debug_type = H5O_MSG_SHARED;
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} else {
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decode = oh->mesg[i].type->decode;
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debug = oh->mesg[i].type->debug;
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debug_type = oh->mesg[i].type;
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} /* end else */
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if(NULL==oh->mesg[i].native && decode)
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oh->mesg[i].native = (decode)(f, dxpl_id, oh->mesg[i].raw);
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if(NULL == oh->mesg[i].native)
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debug = NULL;
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if(NULL==oh->mesg[i].native && debug_type->decode)
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oh->mesg[i].native = (debug_type->decode)(f, dxpl_id, oh->mesg[i].flags, oh->mesg[i].raw);
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/* print the message */
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HDfprintf(stream, "%*s%-*s\n", indent + 3, "", MAX(0, fwidth - 3),
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"Message Information:");
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if(debug)
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(debug)(f, dxpl_id, oh->mesg[i].native, stream, indent + 6, MAX(0, fwidth - 6));
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if(debug_type->debug && oh->mesg[i].native != NULL)
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(debug_type->debug)(f, dxpl_id, oh->mesg[i].native, stream, indent + 6, MAX(0, fwidth - 6));
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else
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HDfprintf(stream, "%*s<No info for this message>\n", indent + 6, "");
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@ -444,6 +439,12 @@ H5O_debug_real(H5F_t *f, hid_t dxpl_id, H5O_t *oh, haddr_t addr, FILE *stream, i
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} /* end for */
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sequence = H5MM_xfree(sequence);
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/* Chunk 0 has header information. Count this in the size of the chunk
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* when we check its size below.
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*/
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if(chunkno == 0)
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mesg_total += H5O_SIZEOF_HDR(oh);
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if(mesg_total != chunk_total)
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HDfprintf(stream, "*** TOTAL SIZE DOES NOT MATCH ALLOCATED SIZE!\n");
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