mirror of
https://github.com/HDFGroup/hdf5.git
synced 2025-02-17 16:10:24 +08:00
[svn-r1707] Changed to different locations or filenames.
INSTALL.ascired -> INSTALL_TFLOPS INSTALL.ibm.sp.parallel -> bin/config_para_ibm_sp.sh INSTALL_parallel.ascired -> bin/config_para_tflops.sh
This commit is contained in:
Albert Cheng
parent
bc87d2a2ce
commit
a9b3674f97
107
INSTALL.ascired
107
INSTALL.ascired
@ -1,107 +0,0 @@
|
||||
|
||||
FOR THE INTEL TFLOPS MACHINE:
|
||||
|
||||
Below are the step-by-step procedures for building, testing, and
|
||||
installing both the sequential and parallel versions of the HDF5 library.
|
||||
|
||||
---------------
|
||||
Sequential HDF5:
|
||||
---------------
|
||||
|
||||
The setup process for building the sequential HDF5 library for the
|
||||
ASCI Red machine is done by a coordination of events from sasn100 and
|
||||
janus. Though janus can do compiling, it is better to build it
|
||||
from sasn100 which has more complete building tools and runs faster.
|
||||
It is also anti-social to tie up janus with compiling. The HDF5 building
|
||||
requires the use of janus because one of steps is to execute a program
|
||||
to find out the run-time characteristics of the TFLOPS machine.
|
||||
|
||||
Assuming you have already unpacked the HDF5 tar-file into the
|
||||
directory <hdf5>, follow the steps below:
|
||||
|
||||
FROM SASN100,
|
||||
|
||||
1) cd <hdf5>
|
||||
|
||||
2) ./configure tflop
|
||||
|
||||
3) make H5detect
|
||||
|
||||
|
||||
FROM JANUS,
|
||||
|
||||
4) cd <hdf5>
|
||||
|
||||
5) make H5Tinit.c
|
||||
|
||||
|
||||
FROM SASN100,
|
||||
|
||||
6) make
|
||||
|
||||
|
||||
When everything is finished compiling and linking,
|
||||
you can run the tests by
|
||||
FROM JANUS,
|
||||
|
||||
7.1) Due to a bug, you must first remove the following line from
|
||||
the file test/Makefile before the next step.
|
||||
RUNTEST=$(LT_RUN)
|
||||
7.2) make check
|
||||
|
||||
|
||||
Once satisfied with the test results, you can install
|
||||
the software by
|
||||
FROM SASN100,
|
||||
|
||||
8) make install
|
||||
|
||||
|
||||
---------------
|
||||
Parallel HDF5:
|
||||
---------------
|
||||
|
||||
The setup process for building the parallel version of the HDF5 library for the
|
||||
ASCI Red machine is very similar to the sequential version. Since TFLOPS
|
||||
does not support MPIO, we have prepared a shell-script file that configures
|
||||
with the appropriate MPI library.
|
||||
|
||||
Assuming you have already unpacked the HDF5 tar-file into the
|
||||
directory <hdf5>, follow the steps below:
|
||||
FROM SASN100,
|
||||
|
||||
1) cd <hdf5>
|
||||
|
||||
2) sh INSTALL_parallel.ascired /* this is different from the sequential version */
|
||||
|
||||
3) make H5detect
|
||||
|
||||
|
||||
FROM JANUS,
|
||||
|
||||
4) cd <hdf5>
|
||||
|
||||
5) make H5Tinit.c
|
||||
|
||||
|
||||
FROM SASN100,
|
||||
|
||||
6) make
|
||||
|
||||
|
||||
When everything is finished compiling and linking,
|
||||
FROM JANUS,
|
||||
|
||||
7.1) Due to a bug, you must first remove the following line from
|
||||
the file test/Makefile before the next step.
|
||||
RUNTEST=$(LT_RUN)
|
||||
7.2) make check
|
||||
|
||||
|
||||
Once satisfied with the parallel test results, as long as you
|
||||
have the correct permission,
|
||||
FROM SASN100,
|
||||
|
||||
8) make install
|
||||
|
||||
|
||||
@ -1,88 +0,0 @@
|
||||
# How to create a parallel version of HDF5 on an IBM SP system
|
||||
# that uses MPI and MPI-IO.
|
||||
|
||||
# Unfortunately, the configure/make process to create the parallel version of
|
||||
# HDF5 has not yet been automated to the same extent that the sequential
|
||||
# version has.
|
||||
# Read the INSTALL file to understand the configure/make process for the
|
||||
# sequential (i.e., uniprocess) version of HDF5.
|
||||
# The process for creating the parallel version of HDF5 using MPI-IO
|
||||
# is similar, but first you will have to set up some environment variables
|
||||
# with values specific to your local installation.
|
||||
# The relevant variables are shown below, with values that work for LLNL's
|
||||
# ASCI baby blue pacific SP as of the writing of these instructions (980210).
|
||||
|
||||
# In addition to the environment variables, you _might_ also have to
|
||||
# create a new file in the config directory.
|
||||
# You will need to create this file only if the execution of the ./configure
|
||||
# program aborts with an error after printing the message
|
||||
# "checking whether byte ordering is bigendian..."
|
||||
#
|
||||
# If this is the case, create a new file in the config directory
|
||||
# whose name is of the form architecture-vendor-OSversion
|
||||
# (e.g., for baby blue pacific, this file is named powerpc-ibm-aix4.2.1.0)
|
||||
# and which contains the line
|
||||
# ac_cv_c_bigendian=${ac_cv_c_bigendian='yes'}
|
||||
# if the target architecture is bigendian, or
|
||||
# ac_cv_c_bigendian=${ac_cv_c_bigendian='no'}
|
||||
# otherwise.
|
||||
# Running the program ./bin/config.guess will print out the name
|
||||
# of the new file you must create.
|
||||
|
||||
# Don't try to make a parallel version of HDF5 from the same hdf5 root
|
||||
# directory where you made a sequential version of HDF5 -- start with
|
||||
# a fresh copy.
|
||||
# Here are the flags you must set before running the ./configure program
|
||||
# to create the parallel version of HDF5.
|
||||
# (We use csh here, but of course you can adapt to whatever shell you like.)
|
||||
|
||||
# compile for MPI jobs
|
||||
setenv CC "/usr/local/mpich-1.1.2+romio_lgfiles/bin/mpicc"
|
||||
|
||||
#
|
||||
# next 4 for IBM mpi
|
||||
#
|
||||
#setenv CC /usr/lpp/ppe.poe/bin/mpcc_r
|
||||
|
||||
#
|
||||
# for both
|
||||
#
|
||||
setenv MP_PROCS 1
|
||||
|
||||
|
||||
# These compiler flags work on ASCI baby blue pacific (IBM SP),
|
||||
# using IBM's MPI and Argonne's MPI-IO (ROMIO):
|
||||
# -DHAVE_FUNCTION compiler accepts __FUNCTION__ notation
|
||||
# -I/usr/local/mpio/include/ibm using ROMIO's MPI-IO header files
|
||||
#
|
||||
# The following flags are only needed when compiling/linking a user program
|
||||
# for execution.
|
||||
# -bI:/usr/include/piofs/piofs.exp this MPI-IO uses PIOFS file system
|
||||
# -L/usr /local/mpio/lib/ibm -lmpio link to this MPI-IO lib
|
||||
#
|
||||
#setenv CFLAGS "-D_LARGE_FILES $CFLAGS"
|
||||
|
||||
# The configure/make process needs to be able to run some programs,
|
||||
# need to specify a processor pool.
|
||||
# Also, don't prepend the process id in the output of the programs
|
||||
# run by config/make.
|
||||
setenv MP_RMPOOL 0
|
||||
setenv MP_LABELIO no
|
||||
|
||||
# Once these variables are set to the proper values for your installation,
|
||||
# you can run the configure program (i.e., ./configure)
|
||||
# to set up the Makefiles, etc.
|
||||
# After configuring, run the make as described in the INSTALL file.
|
||||
# Once the configuration is complete, you can set any of your
|
||||
# environment variables to whatever you like.
|
||||
|
||||
# the files in the config directory, such as
|
||||
# config/powerpc-ibm-aix4.2.1.0
|
||||
# config/powerpc-ibm-aix4.x
|
||||
# config/powerpc-ibm-aix4.3.2.0
|
||||
# sometimes will need some help depending on subtlties of the installation
|
||||
|
||||
|
||||
# When compiling and linking your application, don't forget to compile with
|
||||
# mpcc and link to the MPI-IO library and the parallel version of the HDF5
|
||||
# library (that was created and installed with the configure/make process).
|
||||
@ -1,58 +0,0 @@
|
||||
#! /bin/sh
|
||||
# How to create a parallel version of HDF5 on the Intel Asci Red System
|
||||
# that uses MPI and MPI-IO.
|
||||
|
||||
# Read the INSTALL.ascired file to understand the configure/make process
|
||||
# for the sequential (i.e., uniprocessor) version of HDF5.
|
||||
# The process for creating the parallel version of HDF5 using MPI-IO
|
||||
# is similar, but first you will have to set up some environment variables
|
||||
# with values specific to your local installation.
|
||||
# The relevant variables are shown below, with values that work for Sandia'a
|
||||
# ASCI Red Tflops machine as of the writing of these instructions (980421).
|
||||
|
||||
# Don't try to make a parallel version of HDF5 from the same hdf5 root
|
||||
# directory where you made a sequential version of HDF5 -- start with
|
||||
# a fresh copy.
|
||||
# Here are the flags you must set before running the ./configure program
|
||||
# to create the parallel version of HDF5.
|
||||
# (We use sh here, but of course you can adapt to whatever shell you like.)
|
||||
|
||||
# compile for MPI jobs
|
||||
#CC=cicc
|
||||
|
||||
# The following flags are only needed when compiling/linking a user program
|
||||
# for execution.
|
||||
#
|
||||
|
||||
# Using the MPICH libary by Daniel Sands.
|
||||
# It contains both MPI-1 and MPI-IO functions.
|
||||
ROMIO="${HOME}/MPIO/mpich"
|
||||
if [ ! -d $ROMIO ]
|
||||
then
|
||||
echo "ROMIO directory ($ROMIO) not found"
|
||||
echo "Aborted"
|
||||
exit 1
|
||||
fi
|
||||
mpi1_inc=""
|
||||
mpi1_lib=""
|
||||
mpio_inc="-I$ROMIO/include"
|
||||
mpio_lib="-L$ROMIO/lib"
|
||||
|
||||
|
||||
MPI_INC="$mpi1_inc $mpio_inc"
|
||||
MPI_LIB="$mpi1_lib $mpio_lib"
|
||||
|
||||
|
||||
# Once these variables are set to the proper values for your installation,
|
||||
# you can run the configure program (i.e., ./configure tflop --enable-parallel=mpio)
|
||||
# to set up the Makefiles, etc.
|
||||
# After configuring, run the make as described in the INSTALL file.
|
||||
|
||||
# When compiling and linking your application, don't forget to compile with
|
||||
# cicc and link to the MPI-IO library and the parallel version of the HDF5
|
||||
# library (that was created and installed with the configure/make process).
|
||||
|
||||
CPPFLAGS=$MPI_INC \
|
||||
LDFLAGS=$MPI_LIB \
|
||||
LIBS="-lmpich" \
|
||||
./configure --enable-parallel tflop $@
|
||||
6
MANIFEST
6
MANIFEST
@ -7,11 +7,9 @@
|
||||
|
||||
./COPYING
|
||||
./INSTALL
|
||||
./INSTALL.ascired
|
||||
./INSTALL.ibm.sp.parallel
|
||||
./INSTALL_MAINT
|
||||
./INSTALL_TFLOPS
|
||||
./INSTALL_parallel
|
||||
./INSTALL_parallel.ascired
|
||||
./INSTALL_Windows.txt
|
||||
./MANIFEST
|
||||
./Makefile.dist
|
||||
@ -28,6 +26,8 @@
|
||||
./bin/checkposix _DO_NOT_DISTRIBUTE_
|
||||
./bin/config.guess
|
||||
./bin/config.sub
|
||||
./bin/config_para_ibm_sp.sh
|
||||
./bin/config_para_tflops.sh
|
||||
./bin/debug-ohdr _DO_NOT_DISTRIBUTE_
|
||||
./bin/distdep
|
||||
./bin/errors _DO_NOT_DISTRIBUTE_
|
||||
|
||||
Loading…
Reference in New Issue
Block a user