mirror of
https://github.com/HDFGroup/hdf5.git
synced 2024-11-21 01:04:10 +08:00
Add parrallel runTest.cmake for ph5example
This commit is contained in:
Allen Byrne
parent
ab2ab38fa6
commit
769837f3ae
1
MANIFEST
1
MANIFEST
@ -3243,6 +3243,7 @@
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./config/cmake_ext_mod/NSIS.InstallOptions.ini.in
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./config/cmake_ext_mod/NSIS.template.in
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./config/cmake_ext_mod/runTest.cmake
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./config/cmake_ext_mod/parrunTest.cmake
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./config/cmake_ext_mod/version.plist.in
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# CMake-specific User Files
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325
config/cmake_ext_mod/parrunTest.cmake
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325
config/cmake_ext_mod/parrunTest.cmake
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@ -0,0 +1,325 @@
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#
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# Copyright by The HDF Group.
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# All rights reserved.
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#
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# This file is part of HDF5. The full HDF5 copyright notice, including
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# terms governing use, modification, and redistribution, is contained in
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# the COPYING file, which can be found at the root of the source code
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# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
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# If you do not have access to either file, you may request a copy from
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# help@hdfgroup.org.
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#
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# parrunTest.cmake executes a command using MPI and captures the output in a file. File is then compared
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# against a reference file. Exit status of command can also be compared.
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cmake_policy(SET CMP0007 NEW)
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# arguments checking
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if (NOT TEST_PROGRAM)
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message (FATAL_ERROR "Require TEST_PROGRAM to be defined")
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endif ()
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if (NOT TEST_FOLDER)
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message ( FATAL_ERROR "Require TEST_FOLDER to be defined")
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endif ()
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if (NOT TEST_OUTPUT)
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message (FATAL_ERROR "Require TEST_OUTPUT to be defined")
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endif ()
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if (NOT TEST_EXPECT)
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message (STATUS "Require TEST_EXPECT to be defined")
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endif ()
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if (EXISTS ${TEST_FOLDER}/${TEST_OUTPUT})
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file (REMOVE ${TEST_FOLDER}/${TEST_OUTPUT})
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endif ()
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if (EXISTS ${TEST_FOLDER}/${TEST_OUTPUT}.err)
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file (REMOVE ${TEST_FOLDER}/${TEST_OUTPUT}.err)
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endif ()
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message (STATUS "COMMAND: ${MPIEXEC_EXECUTABLE} ${MPIEXEC_NUMPROC_FLAG} ${MPIEXEC_MAX_NUMPROCS} ${MPIEXEC_PREFLAGS} ${TEST_PROGRAM} ${MPIEXEC_POSTFLAGS} ${TEST_ARGS}")
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if (TEST_LIBRARY_DIRECTORY)
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if (WIN32 AND NOT MINGW)
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set (ENV{PATH} "$ENV{PATH};${TEST_LIBRARY_DIRECTORY}")
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else ()
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set (ENV{LD_LIBRARY_PATH} "$ENV{LD_LIBRARY_PATH}:${TEST_LIBRARY_DIRECTORY}")
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endif ()
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endif ()
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if (TEST_ENV_VAR)
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set (ENV{${TEST_ENV_VAR}} "${TEST_ENV_VALUE}")
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#message (STATUS "ENV:${TEST_ENV_VAR}=$ENV{${TEST_ENV_VAR}}")
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endif ()
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if (NOT TEST_INPUT)
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# run the test program, capture the stdout/stderr and the result var
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execute_process (
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COMMAND ${MPIEXEC_EXECUTABLE} ${MPIEXEC_NUMPROC_FLAG} ${MPIEXEC_MAX_NUMPROCS} ${MPIEXEC_PREFLAGS} ${TEST_PROGRAM} ${MPIEXEC_POSTFLAGS} ${TEST_ARGS}
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WORKING_DIRECTORY ${TEST_FOLDER}
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RESULT_VARIABLE TEST_RESULT
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OUTPUT_FILE ${TEST_OUTPUT}
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ERROR_FILE ${TEST_OUTPUT}.err
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OUTPUT_VARIABLE TEST_OUT
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ERROR_VARIABLE TEST_ERROR
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)
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else ()
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# run the test program with stdin, capture the stdout/stderr and the result var
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execute_process (
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COMMAND ${MPIEXEC_EXECUTABLE} ${MPIEXEC_NUMPROC_FLAG} ${MPIEXEC_MAX_NUMPROCS} ${MPIEXEC_PREFLAGS} ${TEST_PROGRAM} ${MPIEXEC_POSTFLAGS} ${TEST_ARGS}
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WORKING_DIRECTORY ${TEST_FOLDER}
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RESULT_VARIABLE TEST_RESULT
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INPUT_FILE ${TEST_INPUT}
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OUTPUT_FILE ${TEST_OUTPUT}
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ERROR_FILE ${TEST_OUTPUT}.err
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OUTPUT_VARIABLE TEST_OUT
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ERROR_VARIABLE TEST_ERROR
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)
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endif ()
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if (TEST_REGEX)
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# TEST_REGEX should always be matched
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file (READ ${TEST_FOLDER}/${TEST_OUTPUT} TEST_STREAM)
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string (REGEX MATCH "${TEST_REGEX}" REGEX_MATCH ${TEST_STREAM})
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string (COMPARE EQUAL "${REGEX_MATCH}" "${TEST_MATCH}" REGEX_RESULT)
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if (NOT REGEX_RESULT)
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message (STATUS "Failed: The output of ${TEST_PROGRAM} did not contain ${TEST_MATCH}")
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endif ()
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endif ()
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message (STATUS "COMMAND Result: ${TEST_RESULT}")
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# if the .err file exists and ERRROR_APPEND is enabled
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if (EXISTS ${TEST_FOLDER}/${TEST_OUTPUT}.err)
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file (READ ${TEST_FOLDER}/${TEST_OUTPUT}.err TEST_STREAM)
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if (TEST_MASK_FILE)
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STRING(REGEX REPLACE "CurrentDir is [^\n]+\n" "CurrentDir is (dir name)\n" TEST_STREAM "${TEST_STREAM}")
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endif ()
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# remove special output
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string (REGEX REPLACE "^.*_pmi_alps[^\n]+\n" "" TEST_STREAM "${TEST_STREAM}")
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if (NOT ERROR_APPEND)
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# write back to original .err file
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file (WRITE ${TEST_FOLDER}/${TEST_OUTPUT}.err "${TEST_STREAM}")
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else ()
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# append error output to the stdout output file
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file (APPEND ${TEST_FOLDER}/${TEST_OUTPUT} "${TEST_STREAM}")
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endif ()
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endif ()
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# append the test result status with a predefined text
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if (TEST_APPEND)
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file (APPEND ${TEST_FOLDER}/${TEST_OUTPUT} "${TEST_APPEND} ${TEST_RESULT}\n")
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endif ()
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# if the return value is !=${TEST_EXPECT} bail out
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if (NOT TEST_RESULT EQUAL TEST_EXPECT)
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if (NOT TEST_NOERRDISPLAY)
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if (EXISTS ${TEST_FOLDER}/${TEST_OUTPUT})
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file (READ ${TEST_FOLDER}/${TEST_OUTPUT} TEST_STREAM)
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message (STATUS "Output :\n${TEST_STREAM}")
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endif ()
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endif ()
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message (FATAL_ERROR "Failed: Test program ${TEST_PROGRAM} exited != ${TEST_EXPECT}.\n${TEST_ERROR}")
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endif ()
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message (STATUS "COMMAND Error: ${TEST_ERROR}")
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# remove special output
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file (READ ${TEST_FOLDER}/${TEST_OUTPUT} TEST_STREAM)
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string (FIND TEST_STREAM "_pmi_alps" "${TEST_FIND_RESULT}")
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if (TEST_FIND_RESULT GREATER 0)
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string (REGEX REPLACE "^.*_pmi_alps[^\n]+\n" "" TEST_STREAM "${TEST_STREAM}")
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file (WRITE ${TEST_FOLDER}/${TEST_OUTPUT} ${TEST_STREAM})
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endif ()
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# if the output file needs Storage text removed
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if (TEST_MASK)
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file (READ ${TEST_FOLDER}/${TEST_OUTPUT} TEST_STREAM)
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string (REGEX REPLACE "Storage:[^\n]+\n" "Storage: <details removed for portability>\n" TEST_STREAM "${TEST_STREAM}")
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file (WRITE ${TEST_FOLDER}/${TEST_OUTPUT} "${TEST_STREAM}")
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endif ()
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# if the output file needs Modified text removed
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if (TEST_MASK_MOD)
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file (READ ${TEST_FOLDER}/${TEST_OUTPUT} TEST_STREAM)
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string (REGEX REPLACE "Modified:[^\n]+\n" "Modified: XXXX-XX-XX XX:XX:XX XXX\n" TEST_STREAM "${TEST_STREAM}")
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file (WRITE ${TEST_FOLDER}/${TEST_OUTPUT} "${TEST_STREAM}")
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endif ()
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# if the output file or the .err file needs to mask out error stack info
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if (TEST_MASK_ERROR)
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if (NOT TEST_ERRREF)
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# the error stack has been appended to the output file
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file (READ ${TEST_FOLDER}/${TEST_OUTPUT} TEST_STREAM)
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else ()
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# the error stack remains in the .err file
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file (READ ${TEST_FOLDER}/${TEST_OUTPUT}.err TEST_STREAM)
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endif ()
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string (REGEX REPLACE "thread [0-9]*:" "thread (IDs):" TEST_STREAM "${TEST_STREAM}")
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string (REGEX REPLACE ": ([^\n]*)[.]c " ": (file name) " TEST_STREAM "${TEST_STREAM}")
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string (REGEX REPLACE " line [0-9]*" " line (number)" TEST_STREAM "${TEST_STREAM}")
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string (REGEX REPLACE "v[1-9]*[.][0-9]*[.]" "version (number)." TEST_STREAM "${TEST_STREAM}")
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string (REGEX REPLACE "[1-9]*[.][0-9]*[.][0-9]*[^)]*" "version (number)" TEST_STREAM "${TEST_STREAM}")
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string (REGEX REPLACE "H5Eget_auto[1-2]*" "H5Eget_auto(1 or 2)" TEST_STREAM "${TEST_STREAM}")
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string (REGEX REPLACE "H5Eset_auto[1-2]*" "H5Eset_auto(1 or 2)" TEST_STREAM "${TEST_STREAM}")
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# write back the changes to the original files
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if (NOT TEST_ERRREF)
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file (WRITE ${TEST_FOLDER}/${TEST_OUTPUT} "${TEST_STREAM}")
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else ()
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file (WRITE ${TEST_FOLDER}/${TEST_OUTPUT}.err "${TEST_STREAM}")
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endif ()
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endif ()
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# remove text from the output file
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if (TEST_FILTER)
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file (READ ${TEST_FOLDER}/${TEST_OUTPUT} TEST_STREAM)
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string (REGEX REPLACE "${TEST_FILTER}" "${TEST_FILTER_REPLACE}" TEST_STREAM "${TEST_STREAM}")
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file (WRITE ${TEST_FOLDER}/${TEST_OUTPUT} "${TEST_STREAM}")
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endif ()
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if (TEST_REF_FILTER)
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#message (STATUS "TEST_REF_FILTER: ${TEST_APPEND}${TEST_REF_FILTER}")
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file (READ ${TEST_FOLDER}/${TEST_REFERENCE} TEST_STREAM)
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STRING(REGEX REPLACE "${TEST_REF_APPEND}" "${TEST_REF_FILTER}" TEST_STREAM "${TEST_STREAM}")
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file (WRITE ${TEST_FOLDER}/${TEST_REFERENCE} "${TEST_STREAM}")
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endif ()
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# compare output files to references unless this must be skipped
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if (NOT TEST_SKIP_COMPARE)
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if (EXISTS ${TEST_FOLDER}/${TEST_REFERENCE})
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if (WIN32 AND NOT MINGW)
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file (READ ${TEST_FOLDER}/${TEST_REFERENCE} TEST_STREAM)
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file (WRITE ${TEST_FOLDER}/${TEST_REFERENCE} "${TEST_STREAM}")
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endif ()
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if (NOT TEST_SORT_COMPARE)
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# now compare the output with the reference
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execute_process (
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COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT} ${TEST_FOLDER}/${TEST_REFERENCE}
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RESULT_VARIABLE TEST_RESULT
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)
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else ()
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file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} v1)
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file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} v2)
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list (SORT v1)
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list (SORT v2)
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if (NOT v1 STREQUAL v2)
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set(TEST_RESULT 1)
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endif ()
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endif ()
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if (TEST_RESULT)
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set (TEST_RESULT 0)
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file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT} test_act)
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list (LENGTH test_act len_act)
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file (STRINGS ${TEST_FOLDER}/${TEST_REFERENCE} test_ref)
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list (LENGTH test_ref len_ref)
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if (len_act GREATER 0 AND len_ref GREATER 0)
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math (EXPR _FP_LEN "${len_ref} - 1")
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foreach (line RANGE 0 ${_FP_LEN})
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list (GET test_act ${line} str_act)
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list (GET test_ref ${line} str_ref)
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if (NOT ${str_act} STREQUAL ${str_ref})
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if (NOT str_act STREQUAL "")
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set (TEST_RESULT 1)
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message ("line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n")
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endif ()
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endif ()
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endforeach ()
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else ()
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if (len_act EQUAL 0)
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message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_OUTPUT} is empty")
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endif ()
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if (len_ref EQUAL 0)
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message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_REFERENCE} is empty")
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endif ()
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endif ()
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if (NOT len_act EQUAL len_ref)
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set (TEST_RESULT 1)
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endif ()
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endif ()
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message (STATUS "COMPARE Result: ${TEST_RESULT}")
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# again, if return value is !=0 scream and shout
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if (TEST_RESULT)
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message (FATAL_ERROR "Failed: The output of ${TEST_OUTPUT} did not match ${TEST_REFERENCE}")
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endif ()
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endif ()
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# now compare the .err file with the error reference, if supplied
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if (TEST_ERRREF)
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if (WIN32 AND NOT MINGW)
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file (READ ${TEST_FOLDER}/${TEST_ERRREF} TEST_STREAM)
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file (WRITE ${TEST_FOLDER}/${TEST_ERRREF} "${TEST_STREAM}")
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endif ()
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# now compare the error output with the error reference
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execute_process (
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COMMAND ${CMAKE_COMMAND} -E compare_files ${TEST_FOLDER}/${TEST_OUTPUT}.err ${TEST_FOLDER}/${TEST_ERRREF}
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RESULT_VARIABLE TEST_RESULT
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)
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if (TEST_RESULT)
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set (TEST_RESULT 0)
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file (STRINGS ${TEST_FOLDER}/${TEST_OUTPUT}.err test_act)
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list (LENGTH test_act len_act)
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file (STRINGS ${TEST_FOLDER}/${TEST_ERRREF} test_ref)
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list (LENGTH test_ref len_ref)
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math (EXPR _FP_LEN "${len_ref} - 1")
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if (len_act GREATER 0 AND len_ref GREATER 0)
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math (EXPR _FP_LEN "${len_ref} - 1")
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foreach (line RANGE 0 ${_FP_LEN})
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list (GET test_act ${line} str_act)
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list (GET test_ref ${line} str_ref)
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if (NOT ${str_act} STREQUAL ${str_ref})
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if (NOT ${str_act} STREQUAL "")
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set (TEST_RESULT 1)
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message ("line = ${line}\n***ACTUAL: ${str_act}\n****REFER: ${str_ref}\n")
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endif ()
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endif ()
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endforeach ()
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else ()
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if (len_act EQUAL 0)
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message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_OUTPUT}.err is empty")
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endif ()
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if (len_ref EQUAL 0)
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message (STATUS "COMPARE Failed: ${TEST_FOLDER}/${TEST_ERRREF} is empty")
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endif ()
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endif ()
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if (NOT len_act EQUAL len_ref)
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set (TEST_RESULT 1)
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endif ()
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endif ()
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message (STATUS "COMPARE Result: ${TEST_RESULT}")
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# again, if return value is !=0 scream and shout
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if (TEST_RESULT)
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message (FATAL_ERROR "Failed: The error output of ${TEST_OUTPUT}.err did not match ${TEST_ERRREF}")
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endif ()
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endif ()
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endif ()
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if (TEST_GREP_COMPARE)
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# now grep the output with the reference
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file (READ ${TEST_FOLDER}/${TEST_OUTPUT} TEST_STREAM)
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# TEST_REFERENCE should always be matched
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string (REGEX MATCH "${TEST_REFERENCE}" TEST_MATCH ${TEST_STREAM})
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string (COMPARE EQUAL "${TEST_REFERENCE}" "${TEST_MATCH}" TEST_RESULT)
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if (NOT TEST_RESULT)
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message (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did not contain ${TEST_REFERENCE}")
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endif ()
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string (REGEX MATCH "${TEST_FILTER}" TEST_MATCH ${TEST_STREAM})
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if (TEST_EXPECT)
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# TEST_EXPECT (1) interperts TEST_FILTER as NOT to match
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string (LENGTH "${TEST_MATCH}" TEST_RESULT)
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if (TEST_RESULT)
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message (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did contain ${TEST_FILTER}")
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endif ()
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endif ()
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endif ()
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# everything went fine...
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message ("${TEST_PROGRAM} Passed")
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@ -181,17 +181,18 @@
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### Windows pops up a modal permission dialog on this test
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if (H5_HAVE_PARALLEL AND NOT WIN32)
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if (HDF5_ENABLE_USING_MEMCHECKER)
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add_test (NAME EXAMPLES_PAR-ph5example COMMAND $<TARGET_FILE:ph5example>)
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add_test (NAME EXAMPLES_PAR-ph5example COMMAND ${MPIEXEC_EXECUTABLE} ${MPIEXEC_NUMPROC_FLAG} ${MPIEXEC_MAX_NUMPROCS} ${MPIEXEC_PREFLAGS} $<TARGET_FILE:ph5example> ${MPIEXEC_POSTFLAGS})
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else ()
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add_test (NAME EXAMPLES_PAR-ph5example COMMAND "${CMAKE_COMMAND}"
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-D "TEST_PROGRAM=$<TARGET_FILE:ph5example>"
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-D "TEST_ARGS:STRING="
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-D "TEST_EXPECT=0"
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-D "TEST_SKIP_COMPARE=TRUE"
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#-D "TEST_SORT_COMPARE=TRUE"
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-D "TEST_OUTPUT=ph5example.txt"
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#-D "TEST_REFERENCE=ph5example.out"
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-D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
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-P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
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-P "${HDF_RESOURCES_EXT_DIR}/parrunTest.cmake"
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)
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endif ()
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if (NOT "${last_test}" STREQUAL "")
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@ -200,17 +201,18 @@
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set (last_test "EXAMPLES_PAR-ph5example")
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if (BUILD_SHARED_LIBS)
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if (HDF5_ENABLE_USING_MEMCHECKER)
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add_test (NAME EXAMPLES_PAR-shared-ph5example COMMAND $<TARGET_FILE:ph5example-shared>)
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add_test (NAME EXAMPLES_PAR-shared-ph5example COMMAND ${MPIEXEC_EXECUTABLE} ${MPIEXEC_NUMPROC_FLAG} ${MPIEXEC_MAX_NUMPROCS} ${MPIEXEC_PREFLAGS} $<TARGET_FILE:ph5example-shared> ${MPIEXEC_POSTFLAGS})
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else ()
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add_test (NAME EXAMPLES_PAR-shared-ph5example COMMAND "${CMAKE_COMMAND}"
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-D "TEST_PROGRAM=$<TARGET_FILE:ph5example-shared>"
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-D "TEST_ARGS:STRING="
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-D "TEST_EXPECT=0"
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-D "TEST_SKIP_COMPARE=TRUE"
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#-D "TEST_SORT_COMPARE=TRUE"
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-D "TEST_OUTPUT=ph5example-shared.txt"
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#-D "TEST_REFERENCE=ph5example-shared.out"
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-D "TEST_FOLDER=${PROJECT_BINARY_DIR}/H5EX-shared"
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-P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
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-P "${HDF_RESOURCES_EXT_DIR}/parrunTest.cmake"
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)
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endif ()
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set_tests_properties (EXAMPLES_PAR-shared-ph5example PROPERTIES WORKING_DIRECTORY ${PROJECT_BINARY_DIR}/H5EX-shared)
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