[svn-r20577] Bug 1386 - allowing dimension size to be zero. I added test cases in the tests for h5dump and h5diff. I also added the

test cases in the CMAKE script.

Tested on jam, linew, and amani.  Tested CMAKE on jam.

MANIFEST

@@ -1380,7 +1380,8 @@
 ./tools/testfiles/tfpformat.h5
 # h5dump h5repack validation
 ./tools/testfiles/h5repack_filters.h5.ddl
-
+./tools/testfiles/zerodim.ddl
+./tools/testfiles/zerodim.h5
 
 # Expected output from h5ls tests
 ./tools/testfiles/nosuchfile.ls
@@ -1609,6 +1610,7 @@
 ./tools/h5diff/testfiles/h5diff_205.txt
 ./tools/h5diff/testfiles/h5diff_206.txt
 ./tools/h5diff/testfiles/h5diff_207.txt
+./tools/h5diff/testfiles/h5diff_208.txt
 ./tools/h5diff/testfiles/h5diff_300.txt
 ./tools/h5diff/testfiles/h5diff_400.txt
 ./tools/h5diff/testfiles/h5diff_401.txt

tools/h5diff/CMakeLists.txt

@@ -69,6 +69,7 @@ IF (BUILD_TESTING)
       h5diff_205.txt
       h5diff_206.txt
       h5diff_207.txt
+      h5diff_208.txt
       h5diff_21.txt
       h5diff_22.txt
       h5diff_23.txt
@@ -209,6 +210,8 @@ IF (BUILD_TESTING)
       h5diff_extlink_trg.h5
       h5diff_ext2softlink_src.h5
       h5diff_ext2softlink_trg.h5
+      h5diff_dset_zero_dim_size1.h5
+      h5diff_dset_zero_dim_size2.h5
       h5diff_danglelinks1.h5
       h5diff_danglelinks2.h5
       h5diff_grp_recurse1.h5
@@ -364,6 +367,8 @@ IF (BUILD_TESTING)
   SET (FILE16 h5diff_extlink_trg.h5)
   SET (FILE17 h5diff_ext2softlink_src.h5)
   SET (FILE18 h5diff_ext2softlink_trg.h5)
+  SET (FILE19 h5diff_dset_zero_dim_size1.h5)
+  SET (FILE20 h5diff_dset_zero_dim_size2.h5)
   SET (DANGLE_LINK_FILE1 h5diff_danglelinks1.h5)
   SET (DANGLE_LINK_FILE2 h5diff_danglelinks2.h5)
   SET (GRP_RECURSE_FILE1 h5diff_grp_recurse1.h5)
@@ -447,6 +452,8 @@ IF (BUILD_TESTING)
           h5diff_206.out.err
           h5diff_207.out
           h5diff_207.out.err
+          h5diff_208.out
+          h5diff_208.out.err
           h5diff_21.out
           h5diff_21.out.err
           h5diff_22.out
@@ -994,6 +1001,9 @@ ADD_H5_TEST (h5diff_206 0 -c ${FILE2} ${FILE2} g2/dset7  g2/dset8)
 
 ADD_H5_TEST (h5diff_207 0 -c ${FILE2} ${FILE2} g2/dset8  g2/dset9)
 
+# not comparable in dataspace of zero dimension size
+ADD_H5_TEST (h5diff_208 0 -c ${FILE19} ${FILE20}) 
+
 # ##############################################################################
 # # Links compare without --follow-symlinks nor --no-dangling-links
 # ##############################################################################

tools/h5diff/h5diffgentest.c

@@ -53,6 +53,8 @@
 #define FILE16   "h5diff_extlink_trg.h5"
 #define FILE17   "h5diff_ext2softlink_src.h5"
 #define FILE18   "h5diff_ext2softlink_trg.h5"
+#define FILE19   "h5diff_dset_zero_dim_size1.h5"
+#define FILE20   "h5diff_dset_zero_dim_size2.h5"
 #define DANGLE_LINK_FILE1   "h5diff_danglelinks1.h5"
 #define DANGLE_LINK_FILE2   "h5diff_danglelinks2.h5"
 #define GRP_RECURSE_FILE1   "h5diff_grp_recurse1.h5"
@@ -78,8 +80,13 @@
 #define STR_SIZE 3
 #define GBLL    ((unsigned long long) 1024 * 1024 *1024 )
 
-
 #define MY_LINKCLASS 187
+
+/* Dataspace of 0 dimension size */
+#define SPACE1_RANK 2
+#define SPACE1_DIM1 0
+#define SPACE1_DIM2 0
+
 /* A UD link traversal function.  Shouldn't actually be called. */
 static hid_t UD_traverse(UNUSED const char * link_name, UNUSED hid_t cur_group,
                          UNUSED const void * udata, UNUSED size_t udata_size, UNUSED hid_t lapl_id)
@@ -110,6 +117,7 @@ static int test_types(const char *fname);
 static int test_datatypes(const char *fname);
 static int test_attributes(const char *fname,int make_diffs);
 static int test_datasets(const char *fname,int make_diffs);
+static int test_special_datasets(const char *fname,int make_diffs);
 static int test_hyperslab(const char *fname,int make_diffs);
 static int test_link_name(const char *fname1);
 static int test_soft_links(const char *fname1);
@@ -173,6 +181,10 @@ int main(void)
 
     test_ext2soft_links(FILE17, FILE18);
 
+    /* generate 2 files, the second call creates a similar file with differences */
+    test_special_datasets(FILE19,0);
+    test_special_datasets(FILE20,1);
+
     test_dangle_links(DANGLE_LINK_FILE1, DANGLE_LINK_FILE2);
 
     test_group_recurse(GRP_RECURSE_FILE1, GRP_RECURSE_FILE2);
@@ -1249,6 +1261,62 @@ int test_datasets(const char *file,
     return status;
 }
 
+/*-------------------------------------------------------------------------
+* Function: test_special_datasets
+*
+* Purpose: Check datasets with datasapce of zero dimension size.
+*-------------------------------------------------------------------------
+*/
+static
+int test_special_datasets(const char *file,
+                  int make_diffs /* flag to modify data buffers */)
+{
+    hid_t   fid;
+    hid_t   did;
+    hid_t   sid0, sid;
+    hsize_t dims0[SPACE1_RANK]={SPACE1_DIM1, SPACE1_DIM2};
+    hsize_t dims[SPACE1_RANK]={SPACE1_DIM1, SPACE1_DIM2};
+    herr_t  status;
+
+    /* Create a file  */
+    if((fid = H5Fcreate(file, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+        return -1;
+
+    /* Create a dataset with zero dimension size */
+    sid0 = H5Screate_simple(SPACE1_RANK, dims0, NULL);
+    did  = H5Dcreate2(fid, "dset1", H5T_NATIVE_INT, sid0, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+
+    /* close dataset */
+    status = H5Dclose(did);
+    assert(status >= 0);
+
+    /* close dataspace */
+    status = H5Sclose(sid0);
+    assert(status >= 0);
+
+    /* Create a dataset with zero dimension size in one file but the other one 
+     * has a dataset with a non-zero dimension size */
+    if(make_diffs) {
+        dims[1] = SPACE1_DIM2 + 4;        
+    }
+
+    sid = H5Screate_simple(SPACE1_RANK, dims, NULL);
+    did  = H5Dcreate2(fid, "dset2", H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+
+    /* close dataspace */
+    status = H5Sclose(sid);
+    assert(status >= 0);
+
+    /* close dataset */
+    status = H5Dclose(did);
+    assert(status >= 0);
+
+    /* close file */
+    status = H5Fclose(fid);
+    assert(status >= 0);
+    return status;
+}
+
 /*-------------------------------------------------------------------------
 *
 * Purpose: Create test files to compare links, one has longer name than

tools/h5diff/testfiles/h5diff_208.txt

@@ -0,0 +1,5 @@
+Not comparable: </dset1> or </dset1> is an empty dataset
+Not comparable: </dset2> or </dset2> is an empty dataset
+Not comparable: </dset2> has rank 2, dimensions [0x0], max dimensions [0x0]
+and </dset2> has rank 2, dimensions [0x4], max dimensions [0x4]
+EXIT CODE: 0

tools/h5diff/testh5diff.sh

@@ -52,6 +52,8 @@ FILE15=h5diff_extlink_src.h5
 FILE16=h5diff_extlink_trg.h5
 FILE17=h5diff_ext2softlink_src.h5
 FILE18=h5diff_ext2softlink_trg.h5
+FILE19=h5diff_dset_zero_dim_size1.h5
+FILE20=h5diff_dset_zero_dim_size2.h5
 DANGLE_LINK_FILE1=h5diff_danglelinks1.h5
 DANGLE_LINK_FILE2=h5diff_danglelinks2.h5
 # group recursive
@@ -627,12 +629,14 @@ TOOLTEST h5diff_204.txt -c $FILE2 $FILE2 g2/dset4  g2/dset5
 
 TOOLTEST h5diff_205.txt -c $FILE2 $FILE2 g2/dset5  g2/dset6
 
-
 # not comparable in compound
 TOOLTEST h5diff_206.txt -c $FILE2 $FILE2 g2/dset7  g2/dset8
 
 TOOLTEST h5diff_207.txt -c $FILE2 $FILE2 g2/dset8  g2/dset9
 
+# not comparable in dataspace of zero dimension size
+TOOLTEST h5diff_208.txt -c $FILE19 $FILE20 
+
 # ##############################################################################
 # # Links compare without --follow-symlinks nor --no-dangling-links
 # ##############################################################################

tools/h5dump/CMakeLists.txt

@@ -115,6 +115,7 @@ IF (BUILD_TESTING)
       tnbit.ddl
       tnofilename.ddl
       tnullspace.ddl
+      zerodim.ddl
       tordergr1.ddl
       tordergr2.ddl
       tordergr3.ddl
@@ -287,6 +288,7 @@ IF (BUILD_TESTING)
       tnamed_dtype_attr.h5
       tnestedcomp.h5
       tnullspace.h5
+      zerodim.h5
       torderattr.h5
       tordergr.h5
       tsaf.h5
@@ -711,6 +713,8 @@ IF (BUILD_TESTING)
           tnofilename.out.err
           tnullspace.out
           tnullspace.out.err
+          zerodim.out
+          zerodim.out.err
           tordergr1.out
           tordergr1.out.err
           tordergr2.out
@@ -1021,6 +1025,9 @@ IF (BUILD_TESTING)
   # test for displaying dataset and attribute of null space
   ADD_H5_TEST (tnullspace 0 tnullspace.h5)
 
+  # test for displaying dataset and attribute of space with 0 dimension size
+  ADD_H5_TEST (zerodim 0 zerodim.h5)
+
   # test for long double (some systems do not have long double)
   #ADD_H5_TEST (tldouble 0 tldouble.h5)
 
@@ -1327,6 +1334,8 @@ IF (BUILD_TESTING)
   ##Test dataset and attribute of null space.  Commented out:
   ## wait until the XML schema is updated for null space. 
   ##  ADD_XML_H5_TEST (tnullspace.h5 0 tnulspace.h5)
+  ## So is dataspace with 0 dimension size.
+  ##  ADD_XML_H5_TEST (zerodim.h5 0 zerodim.h5)
 
   # other options for xml
 

tools/h5dump/h5dumpgentest.c

@@ -96,6 +96,7 @@
 #define FILE64  "tattrreg.h5"
 #define FILE65  "file_space.h5"
 #define FILE66  "packedbits.h5"
+#define FILE67  "zerodim.h5"
 
 
 
@@ -177,6 +178,11 @@ const H5L_class_t UD_link_class[1] = {{
 #define CDIM2 DIM2/2
 #define RANK  2
 
+/* Dataspace of 0 dimension size */
+#define SPACE3_RANK 2
+#define SPACE3_DIM1 0
+#define SPACE3_DIM2 0
+
 /* Element selection information */
 #define POINT1_NPOINTS 10
 
@@ -5103,7 +5109,41 @@ static void gent_null_space(void)
     H5Fclose(fid);
 }
 
+/*-------------------------------------------------------------------------
+ * Function: gent_zero_dim_size
+ *
+ * Purpose: generates dataset and attribute with dataspace of 0 dimension size
+ *-------------------------------------------------------------------------
+ */
+static void gent_zero_dim_size(void)
+{
+    hid_t fid, root, dataset, space, attr;
+    hsize_t	dims1[] = {SPACE3_DIM1, SPACE3_DIM2};
+    int dset_buf = 10;
+    int point = 4;
 
+    fid = H5Fcreate(FILE67, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+    root = H5Gopen2(fid, "/", H5P_DEFAULT);
+
+    /* dataspace of 0 dimension size */
+    space = H5Screate_simple(SPACE3_RANK, dims1, NULL);
+
+    /* dataset */
+    dataset = H5Dcreate2(fid, "dset of 0 dimension size", H5T_STD_I32BE, space, H5P_DEFAULT, 
+                         H5P_DEFAULT, H5P_DEFAULT);
+    /* nothing should be written */
+    H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, &dset_buf);
+
+    /* attribute */
+    attr = H5Acreate2(root, "attr of 0 dimension size", H5T_NATIVE_UINT, space, H5P_DEFAULT, H5P_DEFAULT);
+    H5Awrite(attr, H5T_NATIVE_INT, &point); /* Nothing can be written */
+
+    H5Dclose(dataset);
+    H5Aclose(attr);
+    H5Gclose(root);
+    H5Sclose(space);
+    H5Fclose(fid);
+}
 
 /*-------------------------------------------------------------------------
  * Function: make_dset
@@ -7144,6 +7184,7 @@ int main(void)
     gent_compound_complex();
     gent_named_dtype_attr();
     gent_null_space();
+    gent_zero_dim_size();
 
     gent_filters();
     gent_fvalues();

tools/h5dump/testh5dump.sh.in

@@ -562,6 +562,9 @@ TOOLTEST thyperslab.ddl thyperslab.h5
 # test for displaying dataset and attribute of null space
 TOOLTEST tnullspace.ddl tnullspace.h5
 
+# test for displaying dataset and attribute of space with 0 dimension size
+TOOLTEST zerodim.ddl zerodim.h5
+
 # test for long double (some systems do not have long double)
 #TOOLTEST tldouble.ddl tldouble.h5
 

tools/testfiles/zerodim.ddl

@@ -0,0 +1,19 @@
+#############################
+Expected output for 'h5dump zerodim.h5'
+#############################
+HDF5 "zerodim.h5" {
+GROUP "/" {
+   ATTRIBUTE "attr of 0 dimension size" {
+      DATATYPE  H5T_STD_U32LE
+      DATASPACE  SIMPLE { ( 0, 0 ) / ( 0, 0 ) }
+      DATA {
+      }
+   }
+   DATASET "dset of 0 dimension size" {
+      DATATYPE  H5T_STD_I32BE
+      DATASPACE  SIMPLE { ( 0, 0 ) / ( 0, 0 ) }
+      DATA {
+      }
+   }
+}
+}