mirror of
https://github.com/HDFGroup/hdf5.git
synced 2025-02-17 16:10:24 +08:00
[svn-r5765]
Purpose:
New Test VL memory leak.
Description:
Test to see if VL type memory leaks when data is overwritten.
Platforms tested:
Linux 2.2(eirene), IRIX 6.5(paz).
This commit is contained in:
Raymond Lu
parent
d934f081d2
commit
22677006ca
751
test/tvltypes.c
751
test/tvltypes.c
@ -95,6 +95,69 @@ void test_vltypes_free_custom(void *_mem, void *info)
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} /* end if */
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}
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/****************************************************************
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**
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** test_vltypes_data_create(): Dataset of VL is supposed to
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** fail when fill value is never written to dataset.
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**
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****************************************************************/
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static void
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test_vltypes_dataset_create(void)
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{
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hid_t fid1; /* HDF5 File IDs */
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hid_t dcpl; /* Dataset Property list */
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hid_t dataset; /* Dataset ID */
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hsize_t dims1[] = {SPACE1_DIM1};
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hid_t sid1; /* Dataspace ID */
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hid_t tid1; /* Datatype ID */
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herr_t ret; /* Generic return value */
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/* Output message about test being performed */
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MESSAGE(5, ("Testing Dataset of VL Datatype Functionality\n"));
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/* Create file */
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fid1 = H5Fcreate(FILENAME, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
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CHECK(fid1, FAIL, "H5Fcreate");
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/* Create dataspace for datasets */
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sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
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CHECK(sid1, FAIL, "H5Screate_simple");
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/* Create a datatype to refer to */
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tid1 = H5Tvlen_create (H5T_NATIVE_UINT);
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CHECK(tid1, FAIL, "H5Tvlen_create");
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/* Create dataset property list */
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dcpl=H5Pcreate(H5P_DATASET_CREATE);
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CHECK(dcpl, FAIL, "H5Pcreate");
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/* Set fill value writting time to be NEVER */
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ret=H5Pset_fill_time(dcpl, H5D_FILL_TIME_NEVER);
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CHECK(ret, FAIL, "H5Pset_fill_time");
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/* Create a dataset, supposed to fail */
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H5E_BEGIN_TRY {
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dataset=H5Dcreate(fid1,"Dataset1",tid1,sid1,dcpl);
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} H5E_END_TRY;
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VERIFY(dataset, FAIL, "H5Dcreate");
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/* Close datatype */
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ret = H5Tclose(tid1);
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CHECK(ret, FAIL, "H5Tclose");
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/* Close disk dataspace */
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ret = H5Sclose(sid1);
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CHECK(ret, FAIL, "H5Sclose");
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/* Close dataset transfer property list */
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ret = H5Pclose(dcpl);
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CHECK(ret, FAIL, "H5Pclose");
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/* Close file */
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ret = H5Fclose(fid1);
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CHECK(ret, FAIL, "H5Fclose");
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}
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/****************************************************************
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**
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** test_vltypes_vlen_atomic(): Test basic VL datatype code.
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@ -148,6 +211,39 @@ test_vltypes_vlen_atomic(void)
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ret=H5Dwrite(dataset,tid1,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
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CHECK(ret, FAIL, "H5Dwrite");
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/* Close Dataset */
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ret = H5Dclose(dataset);
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CHECK(ret, FAIL, "H5Dclose");
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/* Close datatype */
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ret = H5Tclose(tid1);
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CHECK(ret, FAIL, "H5Tclose");
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/* Close disk dataspace */
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ret = H5Sclose(sid1);
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CHECK(ret, FAIL, "H5Sclose");
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/* Close file */
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ret = H5Fclose(fid1);
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CHECK(ret, FAIL, "H5Fclose");
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/* Open the file for data checking */
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fid1 = H5Fopen(FILENAME, H5F_ACC_RDONLY, H5P_DEFAULT);
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CHECK(fid1, FAIL, "H5Fopen");
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/* Open a dataset */
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dataset=H5Dopen(fid1,"Dataset1");
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CHECK(dataset, FAIL, "H5Dopen");
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/* Get dataspace for datasets */
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sid1 = H5Dget_space(dataset);
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CHECK(sid1, FAIL, "H5Dget_space");
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/* Get datatype for dataset */
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tid1 = H5Dget_type(dataset);
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CHECK(tid1, FAIL, "H5Dget_type");
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/* Change to the custom memory allocation routines for reading VL data */
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xfer_pid=H5Pcreate(H5P_DATASET_XFER);
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CHECK(xfer_pid, FAIL, "H5Pcreate");
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@ -219,10 +315,169 @@ test_vltypes_vlen_atomic(void)
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} /* end test_vltypes_vlen_atomic() */
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/****************************************************************
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**
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** rewrite_vltypes_vlen_atomic(): check memory leak for basic VL datatype.
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** Check memory leak for VL datatypes of atomic datatypes
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**
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****************************************************************/
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static void
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rewrite_vltypes_vlen_atomic(void)
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{
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hvl_t wdata[SPACE1_DIM1]; /* Information to write */
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hvl_t rdata[SPACE1_DIM1]; /* Information read in */
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hid_t fid1; /* HDF5 File IDs */
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hid_t dataset; /* Dataset ID */
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hid_t sid1; /* Dataspace ID */
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hid_t tid1; /* Datatype ID */
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hid_t xfer_pid; /* Dataset transfer property list ID */
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hsize_t size; /* Number of bytes which will be used */
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unsigned i,j; /* counting variables */
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size_t mem_used=0; /* Memory used during allocation */
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int increment=4;
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herr_t ret; /* Generic return value */
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/* Output message about test being performed */
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MESSAGE(5, ("Check Memory Leak for Basic Atomic VL Datatype Functionality\n"));
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/* Allocate and initialize VL data to write */
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for(i=0; i<SPACE1_DIM1; i++) {
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wdata[i].p=malloc((i+increment)*sizeof(unsigned int));
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wdata[i].len=i+increment;
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for(j=0; j<(i+increment); j++)
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((unsigned int *)wdata[i].p)[j]=i*20+j;
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} /* end for */
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/* Open file created in test_vltypes_vlen_atomic() */
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fid1 = H5Fopen(FILENAME, H5F_ACC_RDWR, H5P_DEFAULT);
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CHECK(fid1, FAIL, "H5Fopen");
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/* Open the dataset created in test_vltypes_vlen_atomic() */
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dataset=H5Dopen(fid1,"Dataset1");
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CHECK(dataset, FAIL, "H5Dopen");
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/* Open dataspace for dataset */
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sid1 = H5Dget_space(dataset);
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CHECK(sid1, FAIL, "H5Dget_space");
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/* Get datatype for dataset */
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tid1 = H5Dget_type(dataset);
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CHECK(tid1, FAIL, "H5Dget_type");
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/* Write dataset to disk */
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ret=H5Dwrite(dataset,tid1,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
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CHECK(ret, FAIL, "H5Dwrite");
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/* Close Dataset */
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ret = H5Dclose(dataset);
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CHECK(ret, FAIL, "H5Dclose");
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/* Close datatype */
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ret = H5Tclose(tid1);
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CHECK(ret, FAIL, "H5Tclose");
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/* Close disk dataspace */
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ret = H5Sclose(sid1);
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CHECK(ret, FAIL, "H5Sclose");
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/* Close file */
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ret = H5Fclose(fid1);
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CHECK(ret, FAIL, "H5Fclose");
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/* Open the file for data checking */
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fid1 = H5Fopen(FILENAME, H5F_ACC_RDONLY, H5P_DEFAULT);
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CHECK(fid1, FAIL, "H5Fopen");
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/* Open a dataset */
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dataset=H5Dopen(fid1,"Dataset1");
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CHECK(dataset, FAIL, "H5Dopen");
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/* Get dataspace for datasets */
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sid1 = H5Dget_space(dataset);
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CHECK(sid1, FAIL, "H5Dget_space");
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/* Get datatype for dataset */
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tid1 = H5Dget_type(dataset);
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CHECK(tid1, FAIL, "H5Dget_type");
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/* Change to the custom memory allocation routines for reading VL data */
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xfer_pid=H5Pcreate(H5P_DATASET_XFER);
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CHECK(xfer_pid, FAIL, "H5Pcreate");
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ret=H5Pset_vlen_mem_manager(xfer_pid,test_vltypes_alloc_custom,&mem_used,test_vltypes_free_custom,&mem_used);
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CHECK(ret, FAIL, "H5Pset_vlen_mem_manager");
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/* Make certain the correct amount of memory will be used */
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ret=H5Dvlen_get_buf_size(dataset,tid1,sid1,&size);
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CHECK(ret, FAIL, "H5Dvlen_get_buf_size");
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/* 22 elements allocated = 4+5+6+7 elements for each array position */
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VERIFY(size,22*sizeof(unsigned int),"H5Dvlen_get_buf_size");
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/* Read dataset from disk */
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ret=H5Dread(dataset,tid1,H5S_ALL,H5S_ALL,xfer_pid,rdata);
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CHECK(ret, FAIL, "H5Dread");
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/* Make certain the correct amount of memory has been used */
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/* 22 elements allocated = 4+5+6+7 elements for each array position */
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VERIFY(mem_used,22*sizeof(unsigned int),"H5Dread");
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/* Compare data read in */
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for(i=0; i<SPACE1_DIM1; i++) {
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if(wdata[i].len!=rdata[i].len) {
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num_errs++;
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printf("VL data length don't match!, wdata[%d].len=%d, rdata[%d].len=%d\n",(int)i,(int)wdata[i].len,(int)i,(int)rdata[i].len);
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continue;
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} /* end if */
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for(j=0; j<rdata[i].len; j++) {
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if( ((unsigned int *)wdata[i].p)[j] != ((unsigned int *)rdata[i].p)[j] ) {
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num_errs++;
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printf("VL data values don't match!, wdata[%d].p[%d]=%d, rdata[%d].p[%d]=%d\n",(int)i,(int)j, (int)((unsigned int *)wdata[i].p)[j], (int)i,(int)j, (int)((unsigned int *)rdata[i].p)[j]);
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continue;
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} /* end if */
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} /* end for */
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} /* end for */
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/* Reclaim the read VL data */
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ret=H5Dvlen_reclaim(tid1,sid1,xfer_pid,rdata);
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CHECK(ret, FAIL, "H5Dvlen_reclaim");
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/* Make certain the VL memory has been freed */
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VERIFY(mem_used,0,"H5Dvlen_reclaim");
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/* Reclaim the write VL data */
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ret=H5Dvlen_reclaim(tid1,sid1,H5P_DEFAULT,wdata);
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CHECK(ret, FAIL, "H5Dvlen_reclaim");
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/* Close Dataset */
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ret = H5Dclose(dataset);
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CHECK(ret, FAIL, "H5Dclose");
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/* Close datatype */
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ret = H5Tclose(tid1);
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CHECK(ret, FAIL, "H5Tclose");
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/* Close disk dataspace */
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ret = H5Sclose(sid1);
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CHECK(ret, FAIL, "H5Sclose");
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/* Close dataset transfer property list */
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ret = H5Pclose(xfer_pid);
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CHECK(ret, FAIL, "H5Pclose");
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/* Close file */
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ret = H5Fclose(fid1);
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CHECK(ret, FAIL, "H5Fclose");
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} /* end rewrite_vltypes_vlen_atomic() */
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/****************************************************************
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**
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** test_vltypes_vlen_compound(): Test basic VL datatype code.
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** Tests VL datatypes of compound datatypes
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** Test VL datatypes of compound datatypes
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**
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****************************************************************/
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static void
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@ -368,6 +623,154 @@ test_vltypes_vlen_compound(void)
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} /* end test_vltypes_vlen_compound() */
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/****************************************************************
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**
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** rewrite_vltypes_vlen_compound(): Check memory leak for basic VL datatype.
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** Checks memory leak for VL datatypes of compound datatypes
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**
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****************************************************************/
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static void
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rewrite_vltypes_vlen_compound(void)
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{
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typedef struct { /* Struct that the VL sequences are composed of */
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int i;
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float f;
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} s1;
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hvl_t wdata[SPACE1_DIM1]; /* Information to write */
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hvl_t rdata[SPACE1_DIM1]; /* Information read in */
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hid_t fid1; /* HDF5 File IDs */
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hid_t dataset; /* Dataset ID */
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hid_t sid1; /* Dataspace ID */
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hid_t tid1, tid2; /* Datatype IDs */
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hid_t xfer_pid; /* Dataset transfer property list ID */
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hsize_t size; /* Number of bytes which will be used */
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unsigned i,j; /* counting variables */
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size_t mem_used=0; /* Memory used during allocation */
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int increment=4;
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herr_t ret; /* Generic return value */
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/* Output message about test being performed */
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MESSAGE(5, ("Check Memory Leak for Basic Compound VL Datatype Functionality\n"));
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/* Allocate and initialize VL data to write */
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for(i=0; i<SPACE1_DIM1; i++) {
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wdata[i].p=malloc((i+increment)*sizeof(s1));
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wdata[i].len=i+increment;
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for(j=0; j<(i+increment); j++) {
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((s1 *)wdata[i].p)[j].i=i*40+j;
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((s1 *)wdata[i].p)[j].f=(float)((i*60+j)/3.0);
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} /* end for */
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} /* end for */
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/* Create file */
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fid1 = H5Fopen(FILENAME, H5F_ACC_RDWR, H5P_DEFAULT);
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CHECK(fid1, FAIL, "H5Fopen");
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/* Create the base compound type */
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tid2 = H5Tcreate(H5T_COMPOUND, sizeof(s1));
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CHECK(tid2, FAIL, "H5Tcreate");
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ret=H5Tinsert(tid2, "i", HOFFSET(s1, i), H5T_NATIVE_INT);
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CHECK(ret, FAIL, "H5Tinsert");
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ret=H5Tinsert(tid2, "f", HOFFSET(s1, f), H5T_NATIVE_FLOAT);
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CHECK(ret, FAIL, "H5Tinsert");
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/* Create a datatype to refer to */
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tid1 = H5Tvlen_create (tid2);
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CHECK(tid1, FAIL, "H5Tvlen_create");
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/* Create a dataset */
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dataset=H5Dopen(fid1,"Dataset1");
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CHECK(dataset, FAIL, "H5Dopen");
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/* Create dataspace for datasets */
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sid1 = H5Dget_space(dataset);
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CHECK(sid1, FAIL, "H5Dget_space");
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/* Write dataset to disk */
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ret=H5Dwrite(dataset,tid1,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
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CHECK(ret, FAIL, "H5Dwrite");
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/* Change to the custom memory allocation routines for reading VL data */
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xfer_pid=H5Pcreate(H5P_DATASET_XFER);
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CHECK(xfer_pid, FAIL, "H5Pcreate");
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ret=H5Pset_vlen_mem_manager(xfer_pid,test_vltypes_alloc_custom,&mem_used,test_vltypes_free_custom,&mem_used);
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CHECK(ret, FAIL, "H5Pset_vlen_mem_manager");
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/* Make certain the correct amount of memory will be used */
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ret=H5Dvlen_get_buf_size(dataset,tid1,sid1,&size);
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CHECK(ret, FAIL, "H5Dvlen_get_buf_size");
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/* 22 elements allocated = 4 + 5 + 6 + 7 elements for each array position */
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VERIFY(size,22*sizeof(s1),"H5Dvlen_get_buf_size");
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/* Read dataset from disk */
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ret=H5Dread(dataset,tid1,H5S_ALL,H5S_ALL,xfer_pid,rdata);
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CHECK(ret, FAIL, "H5Dread");
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/* Make certain the correct amount of memory has been used */
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/* 22 elements allocated = 4 + 5 + 6 + 7 elements for each array position */
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VERIFY(mem_used,22*sizeof(s1),"H5Dread");
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/* Compare data read in */
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for(i=0; i<SPACE1_DIM1; i++) {
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if(wdata[i].len!=rdata[i].len) {
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num_errs++;
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printf("VL data length don't match!, wdata[%d].len=%d, rdata[%d].len=%d\n",(int)i,(int)wdata[i].len,(int)i,(int)rdata[i].len);
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continue;
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} /* end if */
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for(j=0; j<rdata[i].len; j++) {
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if( ((s1 *)wdata[i].p)[j].i != ((s1 *)rdata[i].p)[j].i ) {
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num_errs++;
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printf("VL data values don't match!, wdata[%d].p[%d].i=%d, rdata[%d].p[%d].i=%d\n",(int)i,(int)j, (int)((s1 *)wdata[i].p)[j].i, (int)i,(int)j, (int)((s1 *)rdata[i].p)[j].i);
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continue;
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} /* end if */
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if( ((s1 *)wdata[i].p)[j].f != ((s1 *)rdata[i].p)[j].f ) {
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num_errs++;
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printf("VL data values don't match!, wdata[%d].p[%d].f=%f, rdata[%d].p[%d].f=%f\n",(int)i,(int)j, (double)((s1 *)wdata[i].p)[j].f, (int)i,(int)j, (double)((s1 *)rdata[i].p)[j].f);
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continue;
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} /* end if */
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} /* end for */
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} /* end for */
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/* Reclaim the VL data */
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ret=H5Dvlen_reclaim(tid1,sid1,xfer_pid,rdata);
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CHECK(ret, FAIL, "H5Dvlen_reclaim");
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/* Make certain the VL memory has been freed */
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VERIFY(mem_used,0,"H5Dvlen_reclaim");
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/* Reclaim the write VL data */
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ret=H5Dvlen_reclaim(tid1,sid1,H5P_DEFAULT,wdata);
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CHECK(ret, FAIL, "H5Dvlen_reclaim");
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/* Close Dataset */
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ret = H5Dclose(dataset);
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CHECK(ret, FAIL, "H5Dclose");
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/* Close datatype */
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ret = H5Tclose(tid1);
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CHECK(ret, FAIL, "H5Tclose");
|
||||
|
||||
/* Close datatype */
|
||||
ret = H5Tclose(tid2);
|
||||
CHECK(ret, FAIL, "H5Tclose");
|
||||
|
||||
/* Close disk dataspace */
|
||||
ret = H5Sclose(sid1);
|
||||
CHECK(ret, FAIL, "H5Sclose");
|
||||
|
||||
/* Close dataset transfer property list */
|
||||
ret = H5Pclose(xfer_pid);
|
||||
CHECK(ret, FAIL, "H5Pclose");
|
||||
|
||||
/* Close file */
|
||||
ret = H5Fclose(fid1);
|
||||
CHECK(ret, FAIL, "H5Fclose");
|
||||
|
||||
} /* end rewrite_vltypes_vlen_compound() */
|
||||
|
||||
/****************************************************************
|
||||
**
|
||||
** test_vltypes_compound_vlen_atomic(): Test basic VL datatype code.
|
||||
@ -525,6 +928,165 @@ test_vltypes_compound_vlen_atomic(void)
|
||||
|
||||
} /* end test_vltypes_compound_vlen_atomic() */
|
||||
|
||||
/****************************************************************
|
||||
**
|
||||
** rewrite_vltypes_compound_vlen_atomic(): Check memory leak for
|
||||
** basic VL datatype code.
|
||||
** Check memory leak for compound datatypes with VL datatypes
|
||||
** of atomic datatypes.
|
||||
**
|
||||
****************************************************************/
|
||||
static void
|
||||
rewrite_vltypes_compound_vlen_atomic(void)
|
||||
{
|
||||
typedef struct { /* Struct that the VL sequences are composed of */
|
||||
int i;
|
||||
float f;
|
||||
hvl_t v;
|
||||
} s1;
|
||||
s1 wdata[SPACE1_DIM1]; /* Information to write */
|
||||
s1 rdata[SPACE1_DIM1]; /* Information read in */
|
||||
hid_t fid1; /* HDF5 File IDs */
|
||||
hid_t dataset; /* Dataset ID */
|
||||
hid_t sid1; /* Dataspace ID */
|
||||
hid_t tid1, tid2; /* Datatype IDs */
|
||||
hid_t xfer_pid; /* Dataset transfer property list ID */
|
||||
hsize_t size; /* Number of bytes which will be used */
|
||||
unsigned i,j; /* counting variables */
|
||||
size_t mem_used=0; /* Memory used during allocation */
|
||||
int increment=4;
|
||||
herr_t ret; /* Generic return value */
|
||||
|
||||
/* Output message about test being performed */
|
||||
MESSAGE(5, ("Checking memory leak for compound datatype with VL Atomic Datatype Component Functionality\n"));
|
||||
|
||||
/* Allocate and initialize VL data to write */
|
||||
for(i=0; i<SPACE1_DIM1; i++) {
|
||||
wdata[i].i=i*40;
|
||||
wdata[i].f=(float)((i*50)/3.0);
|
||||
wdata[i].v.p=malloc((i+increment)*sizeof(unsigned int));
|
||||
wdata[i].v.len=i+increment;
|
||||
for(j=0; j<(i+increment); j++)
|
||||
((unsigned int *)wdata[i].v.p)[j]=i*60+j;
|
||||
} /* end for */
|
||||
|
||||
/* Create file */
|
||||
fid1 = H5Fopen(FILENAME, H5F_ACC_RDWR, H5P_DEFAULT);
|
||||
CHECK(fid1, FAIL, "H5Fopen");
|
||||
|
||||
/* Create a VL datatype to refer to */
|
||||
tid1 = H5Tvlen_create (H5T_NATIVE_UINT);
|
||||
CHECK(tid1, FAIL, "H5Tvlen_create");
|
||||
|
||||
/* Create the base compound type */
|
||||
tid2 = H5Tcreate(H5T_COMPOUND, sizeof(s1));
|
||||
CHECK(tid2, FAIL, "H5Tcreate");
|
||||
|
||||
/* Insert fields */
|
||||
ret=H5Tinsert(tid2, "i", HOFFSET(s1, i), H5T_NATIVE_INT);
|
||||
CHECK(ret, FAIL, "H5Tinsert");
|
||||
ret=H5Tinsert(tid2, "f", HOFFSET(s1, f), H5T_NATIVE_FLOAT);
|
||||
CHECK(ret, FAIL, "H5Tinsert");
|
||||
ret=H5Tinsert(tid2, "v", HOFFSET(s1, v), tid1);
|
||||
CHECK(ret, FAIL, "H5Tinsert");
|
||||
|
||||
/* Create a dataset */
|
||||
dataset=H5Dopen(fid1,"Dataset1");
|
||||
CHECK(dataset, FAIL, "H5Dopen");
|
||||
|
||||
/* Create dataspace for datasets */
|
||||
sid1 = H5Dget_space(dataset);
|
||||
CHECK(sid1, FAIL, "H5Dget_space");
|
||||
|
||||
/* Write dataset to disk */
|
||||
ret=H5Dwrite(dataset,tid2,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
|
||||
CHECK(ret, FAIL, "H5Dwrite");
|
||||
|
||||
/* Change to the custom memory allocation routines for reading VL data */
|
||||
xfer_pid=H5Pcreate(H5P_DATASET_XFER);
|
||||
CHECK(xfer_pid, FAIL, "H5Pcreate");
|
||||
|
||||
ret=H5Pset_vlen_mem_manager(xfer_pid,test_vltypes_alloc_custom,&mem_used,test_vltypes_free_custom,&mem_used);
|
||||
CHECK(ret, FAIL, "H5Pset_vlen_mem_manager");
|
||||
|
||||
/* Make certain the correct amount of memory will be used */
|
||||
ret=H5Dvlen_get_buf_size(dataset,tid2,sid1,&size);
|
||||
CHECK(ret, FAIL, "H5Dvlen_get_buf_size");
|
||||
|
||||
/* 22 elements allocated = 4+5+6+7 elements for each array position */
|
||||
VERIFY(size, 22*sizeof(unsigned int),"H5Dvlen_get_buf_size");
|
||||
|
||||
/* Read dataset from disk */
|
||||
ret=H5Dread(dataset,tid2,H5S_ALL,H5S_ALL,xfer_pid,rdata);
|
||||
CHECK(ret, FAIL, "H5Dread");
|
||||
|
||||
/* Make certain the correct amount of memory has been used */
|
||||
/* 22 elements allocated = 4+5+6+7 elements for each array position */
|
||||
VERIFY(mem_used,22*sizeof(unsigned int),"H5Dread");
|
||||
|
||||
/* Compare data read in */
|
||||
for(i=0; i<SPACE1_DIM1; i++) {
|
||||
if(wdata[i].i!=rdata[i].i) {
|
||||
num_errs++;
|
||||
printf("Integer components don't match!, wdata[%d].i=%d, rdata[%d].i=%d\n",(int)i,(int)wdata[i].i,(int)i,(int)rdata[i].i);
|
||||
continue;
|
||||
} /* end if */
|
||||
if(wdata[i].f!=rdata[i].f) {
|
||||
num_errs++;
|
||||
printf("Float components don't match!, wdata[%d].f=%f, rdata[%d].f=%f\n",(int)i,(double)wdata[i].f,(int)i,(double)rdata[i].f);
|
||||
continue;
|
||||
} /* end if */
|
||||
if(wdata[i].v.len!=rdata[i].v.len) {
|
||||
num_errs++;
|
||||
printf("VL data length don't match!, wdata[%d].v.len=%d, rdata[%d].v.len=%d\n",(int)i,(int)wdata[i].v.len,(int)i,(int)rdata[i].v.len);
|
||||
continue;
|
||||
} /* end if */
|
||||
for(j=0; j<rdata[i].v.len; j++) {
|
||||
if( ((unsigned int *)wdata[i].v.p)[j] != ((unsigned int *)rdata[i].v.p)[j] ) {
|
||||
num_errs++;
|
||||
printf("VL data values don't match!, wdata[%d].v.p[%d]=%d, rdata[%d].v.p[%d]=%d\n",(int)i,(int)j, (int)((unsigned int *)wdata[i].v.p)[j], (int)i,(int)j, (int)((unsigned int *)rdata[i].v.p)[j]);
|
||||
continue;
|
||||
} /* end if */
|
||||
} /* end for */
|
||||
} /* end for */
|
||||
|
||||
/* Reclaim the VL data */
|
||||
ret=H5Dvlen_reclaim(tid2,sid1,xfer_pid,rdata);
|
||||
CHECK(ret, FAIL, "H5Dvlen_reclaim");
|
||||
|
||||
/* Make certain the VL memory has been freed */
|
||||
VERIFY(mem_used,0,"H5Dvlen_reclaim");
|
||||
|
||||
/* Reclaim the write VL data */
|
||||
ret=H5Dvlen_reclaim(tid2,sid1,H5P_DEFAULT,wdata);
|
||||
CHECK(ret, FAIL, "H5Dvlen_reclaim");
|
||||
|
||||
/* Close Dataset */
|
||||
ret = H5Dclose(dataset);
|
||||
CHECK(ret, FAIL, "H5Dclose");
|
||||
|
||||
/* Close datatype */
|
||||
ret = H5Tclose(tid2);
|
||||
CHECK(ret, FAIL, "H5Tclose");
|
||||
|
||||
/* Close datatype */
|
||||
ret = H5Tclose(tid1);
|
||||
CHECK(ret, FAIL, "H5Tclose");
|
||||
|
||||
/* Close disk dataspace */
|
||||
ret = H5Sclose(sid1);
|
||||
CHECK(ret, FAIL, "H5Sclose");
|
||||
|
||||
/* Close dataset transfer property list */
|
||||
ret = H5Pclose(xfer_pid);
|
||||
CHECK(ret, FAIL, "H5Pclose");
|
||||
|
||||
/* Close file */
|
||||
ret = H5Fclose(fid1);
|
||||
CHECK(ret, FAIL, "H5Fclose");
|
||||
|
||||
} /* end rewrite_vltypes_compound_vlen_atomic() */
|
||||
|
||||
/****************************************************************
|
||||
**
|
||||
** test_vltypes_vlen_vlen_atomic(): Test basic VL datatype code.
|
||||
@ -741,6 +1303,186 @@ test_vltypes_vlen_vlen_atomic(void)
|
||||
|
||||
} /* end test_vltypes_vlen_vlen_atomic() */
|
||||
|
||||
/****************************************************************
|
||||
**
|
||||
** rewrite_vltypes_vlen_vlen_atomic(): Test basic VL datatype code.
|
||||
** Tests VL datatype with VL datatypes of atomic datatypes.
|
||||
**
|
||||
****************************************************************/
|
||||
static void
|
||||
rewrite_vltypes_vlen_vlen_atomic(void)
|
||||
{
|
||||
hvl_t wdata[SPACE1_DIM1]; /* Information to write */
|
||||
hvl_t rdata[SPACE1_DIM1]; /* Information read in */
|
||||
hvl_t *t1, *t2; /* Temporary pointer to VL information */
|
||||
hid_t fid1; /* HDF5 File IDs */
|
||||
hid_t dataset; /* Dataset ID */
|
||||
hid_t sid1; /* Dataspace ID */
|
||||
hid_t tid2; /* Datatype IDs */
|
||||
hid_t xfer_pid; /* Dataset transfer property list ID */
|
||||
hsize_t size; /* Number of bytes which will be used */
|
||||
unsigned i,j,k; /* counting variables */
|
||||
size_t mem_used=0; /* Memory used during allocation */
|
||||
herr_t ret; /* Generic return value */
|
||||
|
||||
/* Output message about test being performed */
|
||||
MESSAGE(5, ("Check memory leak for VL Datatypes with VL Atomic Datatype Component Functionality\n"));
|
||||
|
||||
/* Allocate and initialize VL data to write */
|
||||
for(i=0; i<SPACE1_DIM1; i++) {
|
||||
wdata[i].p=malloc((i+1)*sizeof(hvl_t));
|
||||
if(wdata[i].p==NULL) {
|
||||
printf("Cannot allocate memory for VL data! i=%u\n",i);
|
||||
num_errs++;
|
||||
return;
|
||||
} /* end if */
|
||||
wdata[i].len=i+1;
|
||||
for(t1=wdata[i].p,j=0; j<(i+1); j++, t1++) {
|
||||
t1->p=malloc((j+1)*sizeof(unsigned int));
|
||||
if(t1->p==NULL) {
|
||||
printf("Cannot allocate memory for VL data! i=%u, j=%u\n",i,j);
|
||||
num_errs++;
|
||||
return;
|
||||
} /* end if */
|
||||
t1->len=j+1;
|
||||
for(k=0; k<(j+1); k++)
|
||||
((unsigned int *)t1->p)[k]=i*100+j*10+k;
|
||||
} /* end for */
|
||||
} /* end for */
|
||||
|
||||
/* Open file */
|
||||
fid1 = H5Fopen(FILENAME, H5F_ACC_RDWR, H5P_DEFAULT);
|
||||
CHECK(fid1, FAIL, "H5Fopen");
|
||||
|
||||
/* Open the dataset */
|
||||
dataset=H5Dopen(fid1,"Dataset1");
|
||||
CHECK(dataset, FAIL, "H5Dopen");
|
||||
|
||||
/* Get dataspace for datasets */
|
||||
sid1 = H5Dget_space(dataset);
|
||||
CHECK(sid1, FAIL, "H5Dget_space");
|
||||
|
||||
/* Open datatype of the dataset */
|
||||
tid2 = H5Dget_type(dataset);
|
||||
CHECK(tid2, FAIL, "H5Dget_type");
|
||||
|
||||
/* Write dataset to disk */
|
||||
ret=H5Dwrite(dataset,tid2,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata);
|
||||
CHECK(ret, FAIL, "H5Dwrite");
|
||||
|
||||
/* Close Dataset */
|
||||
ret = H5Dclose(dataset);
|
||||
CHECK(ret, FAIL, "H5Dclose");
|
||||
|
||||
/* Close datatype */
|
||||
ret = H5Tclose(tid2);
|
||||
CHECK(ret, FAIL, "H5Tclose");
|
||||
|
||||
/* Close disk dataspace */
|
||||
ret = H5Sclose(sid1);
|
||||
CHECK(ret, FAIL, "H5Sclose");
|
||||
|
||||
/* Close file */
|
||||
ret = H5Fclose(fid1);
|
||||
CHECK(ret, FAIL, "H5Fclose");
|
||||
|
||||
|
||||
/* Open the file for data checking */
|
||||
fid1 = H5Fopen(FILENAME, H5F_ACC_RDONLY, H5P_DEFAULT);
|
||||
CHECK(fid1, FAIL, "H5Fopen");
|
||||
|
||||
/* Open a dataset */
|
||||
dataset=H5Dopen(fid1,"Dataset1");
|
||||
CHECK(dataset, FAIL, "H5Dopen");
|
||||
|
||||
/* Get dataspace for datasets */
|
||||
sid1 = H5Dget_space(dataset);
|
||||
CHECK(sid1, FAIL, "H5Dget_space");
|
||||
|
||||
/* Get datatype for dataset */
|
||||
tid2 = H5Dget_type(dataset);
|
||||
CHECK(tid2, FAIL, "H5Dget_type");
|
||||
|
||||
/* Change to the custom memory allocation routines for reading VL data */
|
||||
xfer_pid=H5Pcreate(H5P_DATASET_XFER);
|
||||
CHECK(xfer_pid, FAIL, "H5Pcreate");
|
||||
|
||||
ret=H5Pset_vlen_mem_manager(xfer_pid,test_vltypes_alloc_custom,&mem_used,test_vltypes_free_custom,&mem_used);
|
||||
CHECK(ret, FAIL, "H5Pset_vlen_mem_manager");
|
||||
|
||||
/* Make certain the correct amount of memory was used */
|
||||
ret=H5Dvlen_get_buf_size(dataset,tid2,sid1,&size);
|
||||
CHECK(ret, FAIL, "H5Dvlen_get_buf_size");
|
||||
|
||||
/* 10 hvl_t elements allocated = 1 + 2 + 3 + 4 elements for each array position */
|
||||
/* 20 unsigned int elements allocated = 1 + 3 + 6 + 10 elements */
|
||||
VERIFY(size,((SPACE1_DIM1*(SPACE1_DIM1+1))/2)*sizeof(hvl_t)+vlen_size_func(SPACE1_DIM1)*sizeof(unsigned int),"H5Dvlen_get_buf_size");
|
||||
|
||||
/* Read dataset from disk */
|
||||
ret=H5Dread(dataset,tid2,H5S_ALL,H5S_ALL,xfer_pid,rdata);
|
||||
CHECK(ret, FAIL, "H5Dread");
|
||||
|
||||
/* Make certain the correct amount of memory has been used */
|
||||
/* 10 hvl_t elements allocated = 1 + 2 + 3 + 4 elements for each array position */
|
||||
/* 20 unsigned int elements allocated = 1 + 3 + 6 + 10 elements */
|
||||
VERIFY(mem_used,((SPACE1_DIM1*(SPACE1_DIM1+1))/2)*sizeof(hvl_t)+vlen_size_func(SPACE1_DIM1)*sizeof(unsigned int),"H5Dread");
|
||||
|
||||
/* Compare data read in */
|
||||
for(i=0; i<SPACE1_DIM1; i++) {
|
||||
if(wdata[i].len!=rdata[i].len) {
|
||||
num_errs++;
|
||||
printf("VL data length don't match!, wdata[%d].len=%d, rdata[%d].len=%d\n",(int)i,(int)wdata[i].len,(int)i,(int)rdata[i].len);
|
||||
continue;
|
||||
} /* end if */
|
||||
for(t1=wdata[i].p, t2=rdata[i].p, j=0; j<rdata[i].len; j++, t1++, t2++)
|
||||
{
|
||||
if(t1->len!=t2->len) {
|
||||
num_errs++;
|
||||
printf("VL data length don't match!, i=%d, j=%d, t1->len=%d, t2->len=%d\n",(int)i,(int)j,(int)t1->len,(int)t2->len);
|
||||
continue;
|
||||
} /* end if */
|
||||
for(k=0; k<t2->len; k++) {
|
||||
if( ((unsigned int *)t1->p)[k] != ((unsigned int *)t2->p)[k] ) { num_errs++;
|
||||
printf("VL data values don't match!, t1->p[%d]=%d, t2->p[%d]=%d\n",(int)k, (int)((unsigned int *)t1->p)[k], (int)k, (int)((unsigned int *)t2->p)[k]);
|
||||
continue;
|
||||
} /* end if */
|
||||
} /* end for */
|
||||
} /* end for */
|
||||
} /* end for */
|
||||
|
||||
/* Reclaim all the (nested) VL data */
|
||||
ret=H5Dvlen_reclaim(tid2,sid1,xfer_pid,rdata);
|
||||
CHECK(ret, FAIL, "H5Dvlen_reclaim");
|
||||
|
||||
/* Make certain the VL memory has been freed */
|
||||
VERIFY(mem_used,0,"H5Dvlen_reclaim");
|
||||
|
||||
/* Reclaim the write VL data */
|
||||
ret=H5Dvlen_reclaim(tid2,sid1,H5P_DEFAULT,wdata);
|
||||
CHECK(ret, FAIL, "H5Dvlen_reclaim");
|
||||
|
||||
/* Close Dataset */
|
||||
ret = H5Dclose(dataset);
|
||||
CHECK(ret, FAIL, "H5Dclose");
|
||||
|
||||
/* Close datatype */
|
||||
ret = H5Tclose(tid2);
|
||||
CHECK(ret, FAIL, "H5Tclose");
|
||||
|
||||
/* Close disk dataspace */
|
||||
ret = H5Sclose(sid1);
|
||||
CHECK(ret, FAIL, "H5Sclose");
|
||||
|
||||
/* Close dataset transfer property list */
|
||||
ret = H5Pclose(xfer_pid);
|
||||
CHECK(ret, FAIL, "H5Pclose");
|
||||
|
||||
/* Close file */
|
||||
ret = H5Fclose(fid1);
|
||||
CHECK(ret, FAIL, "H5Fclose");
|
||||
|
||||
} /* end rewrite_vltypes_vlen_vlen_atomic() */
|
||||
|
||||
/****************************************************************
|
||||
**
|
||||
** test_vltypes(): Main VL datatype testing routine.
|
||||
@ -753,10 +1495,16 @@ test_vltypes(void)
|
||||
MESSAGE(5, ("Testing Variable-Length Datatypes\n"));
|
||||
|
||||
/* These next tests use the same file */
|
||||
test_vltypes_dataset_create(); /* Check dataset of VL when fill value
|
||||
* won't be rewritten to it.*/
|
||||
test_vltypes_vlen_atomic(); /* Test VL atomic datatypes */
|
||||
rewrite_vltypes_vlen_atomic(); /* Check VL memory leak */
|
||||
test_vltypes_vlen_compound(); /* Test VL compound datatypes */
|
||||
rewrite_vltypes_vlen_compound(); /* Check VL memory leak */
|
||||
test_vltypes_compound_vlen_atomic(); /* Test compound datatypes with VL atomic components */
|
||||
rewrite_vltypes_compound_vlen_atomic(); /* Check VL memory leak */
|
||||
test_vltypes_vlen_vlen_atomic(); /* Test VL datatype with VL atomic components */
|
||||
rewrite_vltypes_vlen_vlen_atomic(); /* Check VL memory leak */
|
||||
} /* test_vltypes() */
|
||||
|
||||
|
||||
@ -779,4 +1527,3 @@ cleanup_vltypes(void)
|
||||
{
|
||||
remove(FILENAME);
|
||||
}
|
||||
|
||||
|
||||
Loading…
Reference in New Issue
Block a user