[svn-r25019] Description:

Updated configuration file to use Doxygen 1.8.5 properly.
    Verified with Doxygen 1.8.5 on Jam, using bin/release.
    After committing, this will be checked out and verified
    again to make sure.

c++/src/cpp_doc_config

@@ -51,14 +51,14 @@ PROJECT_BRIEF          =
 # and the maximum width should not exceed 200 pixels. Doxygen will copy the logo
 # to the output directory.
 
-PROJECT_LOGO           = 
+PROJECT_LOGO           = ./header_files/hdf_logo.jpg
 
 # The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute) path
 # into which the generated documentation will be written. If a relative path is
 # entered, it will be relative to the location where doxygen was started. If
 # left blank the current directory will be used.
 
-OUTPUT_DIRECTORY       = C:/hdf/C++/html
+OUTPUT_DIRECTORY       = HTML
 
 # If the CREATE_SUBDIRS tag is set to YES, then doxygen will create 4096 sub-
 # directories (in 2 levels) under the output directory of each output format and
@@ -288,7 +288,7 @@ EXTENSION_MAPPING      =
 # case of backward compatibilities issues.
 # The default value is: YES.
 
-MARKDOWN_SUPPORT       = YES
+MARKDOWN_SUPPORT       = NO
 
 # When enabled doxygen tries to link words that correspond to documented
 # classes, or namespaces to their corresponding documentation. Such a link can
@@ -631,14 +631,14 @@ SHOW_USED_FILES        = YES
 # (if specified).
 # The default value is: YES.
 
-SHOW_FILES             = YES
+SHOW_FILES             = NO
 
 # Set the SHOW_NAMESPACES tag to NO to disable the generation of the Namespaces
 # page. This will remove the Namespaces entry from the Quick Index and from the
 # Folder Tree View (if specified).
 # The default value is: YES.
 
-SHOW_NAMESPACES        = YES
+SHOW_NAMESPACES        = NO
 
 # The FILE_VERSION_FILTER tag can be used to specify a program or script that
 # doxygen should invoke to get the current version for each file (typically from
@@ -743,7 +743,7 @@ WARN_LOGFILE           =
 # spaces.
 # Note: If this tag is empty the current directory is searched.
 
-INPUT                  = C:/hdf/C++/src
+INPUT                  = .
 
 # This tag can be used to specify the character encoding of the source files
 # that doxygen parses. Internally doxygen uses the UTF-8 encoding. Doxygen uses
@@ -810,7 +810,7 @@ FILE_PATTERNS          = *.c \
 # be searched for input files as well.
 # The default value is: NO.
 
-RECURSIVE              = YES
+RECURSIVE              = NO
 
 # The EXCLUDE tag can be used to specify files and/or directories that should be
 # excluded from the INPUT source files. This way you can easily exclude a
@@ -819,7 +819,8 @@ RECURSIVE              = YES
 # Note that relative paths are relative to the directory from which doxygen is
 # run.
 
-EXCLUDE                = 
+EXCLUDE                = C:/hdf/C++/src/H5Alltypes.h \
+                         C:/hdf/C++/src/H5Classes.h
 
 # The EXCLUDE_SYMLINKS tag can be used to select whether or not files or
 # directories that are symbolic links (a Unix file system feature) are excluded
@@ -852,14 +853,14 @@ EXCLUDE_SYMBOLS        =
 # that contain example code fragments that are included (see the \include
 # command).
 
-EXAMPLE_PATH           = 
+EXAMPLE_PATH           = ../examples
 
 # If the value of the EXAMPLE_PATH tag contains directories, you can use the
 # EXAMPLE_PATTERNS tag to specify one or more wildcard pattern (like *.cpp and
 # *.h) to filter out the source-files in the directories. If left blank all
 # files are included.
 
-EXAMPLE_PATTERNS       = *
+EXAMPLE_PATTERNS       = 
 
 # If the EXAMPLE_RECURSIVE tag is set to YES then subdirectories will be
 # searched for input files to be used with the \include or \dontinclude commands
@@ -952,13 +953,13 @@ STRIP_CODE_COMMENTS    = YES
 # function all documented functions referencing it will be listed.
 # The default value is: NO.
 
-REFERENCED_BY_RELATION = NO
+REFERENCED_BY_RELATION = YES
 
 # If the REFERENCES_RELATION tag is set to YES then for each documented function
 # all documented entities called/used by that function will be listed.
 # The default value is: NO.
 
-REFERENCES_RELATION    = NO
+REFERENCES_RELATION    = YES
 
 # If the REFERENCES_LINK_SOURCE tag is set to YES and SOURCE_BROWSER tag is set
 # to YES, then the hyperlinks from functions in REFERENCES_RELATION and
@@ -1017,7 +1018,7 @@ VERBATIM_HEADERS       = YES
 # compiled with the --with-libclang option.
 # The default value is: NO.
 
-CLANG_ASSISTED_PARSING = NO
+# CLANG_ASSISTED_PARSING = NO
 
 # If clang assisted parsing is enabled you can provide the compiler with command
 # line options that you would normally use when invoking the compiler. Note that
@@ -1025,7 +1026,7 @@ CLANG_ASSISTED_PARSING = NO
 # specified with INPUT and INCLUDE_PATH.
 # This tag requires that the tag CLANG_ASSISTED_PARSING is set to YES.
 
-CLANG_OPTIONS          = 
+# CLANG_OPTIONS          = 
 
 #---------------------------------------------------------------------------
 # Configuration options related to the alphabetical class index
@@ -1068,7 +1069,7 @@ GENERATE_HTML          = YES
 # The default directory is: html.
 # This tag requires that the tag GENERATE_HTML is set to YES.
 
-HTML_OUTPUT            = html
+HTML_OUTPUT            = HTML
 
 # The HTML_FILE_EXTENSION tag can be used to specify the file extension for each
 # generated HTML page (for example: .htm, .php, .asp).
@@ -1456,7 +1457,7 @@ FORMULA_FONTSIZE       = 10
 # The default value is: YES.
 # This tag requires that the tag GENERATE_HTML is set to YES.
 
-FORMULA_TRANSPARENT    = YES
+FORMULA_TRANSPARENT    = NO
 
 # Enable the USE_MATHJAX option to render LaTeX formulas using MathJax (see
 # http://www.mathjax.org) which uses client side Javascript for the rendering
@@ -1600,7 +1601,7 @@ EXTRA_SEARCH_MAPPINGS  =
 # If the GENERATE_LATEX tag is set to YES doxygen will generate LaTeX output.
 # The default value is: YES.
 
-GENERATE_LATEX         = YES
+GENERATE_LATEX         = NO
 
 # The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put. If a
 # relative path is entered the value of OUTPUT_DIRECTORY will be put in front of
@@ -1995,7 +1996,7 @@ INCLUDE_FILE_PATTERNS  =
 # recursively expanded use the := operator instead of the = operator.
 # This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
 
-PREDEFINED             = 
+PREDEFINED             = DOXYGEN_SHOULD_SKIP_THIS
 
 # If the MACRO_EXPANSION and EXPAND_ONLY_PREDEF tags are set to YES then this
 # tag can be used to specify a list of macro names that should be expanded. The