2003-03-06 04:18:31 +08:00
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! * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
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2007-02-08 01:55:01 +08:00
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! Copyright by The HDF Group. *
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2003-03-06 04:18:31 +08:00
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! Copyright by the Board of Trustees of the University of Illinois. *
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! All rights reserved. *
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! *
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! This file is part of HDF5. The full HDF5 copyright notice, including *
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! terms governing use, modification, and redistribution, is contained in *
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! the files COPYING and Copyright.html. COPYING can be found at the root *
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! of the source code distribution tree; Copyright.html can be found at the *
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! root level of an installed copy of the electronic HDF5 document set and *
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! is linked from the top-level documents page. It can also be found at *
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2007-02-08 01:55:01 +08:00
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! http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
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! access to either file, you may request a copy from help@hdfgroup.org. *
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2003-03-06 04:18:31 +08:00
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! * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
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!
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!
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!
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! Testing Variable_length datatypes
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!
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!
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!
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SUBROUTINE vl_test_integer(cleanup, total_error)
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USE HDF5 ! This module contains all necessary modules
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IMPLICIT NONE
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LOGICAL, INTENT(IN) :: cleanup
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INTEGER, INTENT(OUT) :: total_error
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CHARACTER(LEN=7), PARAMETER :: filename = "VLtypes" ! File name
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CHARACTER(LEN=80) :: fix_filename
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CHARACTER(LEN=5), PARAMETER :: dsetname = "VLint" ! Dataset name
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INTEGER(HID_T) :: file_id ! File identifier
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INTEGER(HID_T) :: dset_id ! Dataset identifier
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INTEGER(HID_T) :: dspace_id ! Dataspace identifier
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INTEGER(HID_T) :: vltype_id ! Datatype identifier
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INTEGER(HSIZE_T), DIMENSION(1) :: dims = (/6/) ! Dataset dimensions
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INTEGER(SIZE_T), DIMENSION(6) :: len ! Elements lengths
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INTEGER(SIZE_T), DIMENSION(6) :: len_out
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INTEGER :: rank = 1 ! Dataset rank
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INTEGER, DIMENSION(5,6) :: vl_int_data ! Data buffers
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INTEGER, DIMENSION(5,6) :: vl_int_data_out ! Data buffers
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INTEGER :: error ! Error flag
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INTEGER :: i, j !general purpose integers
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INTEGER(HSIZE_T), DIMENSION(2) :: data_dims = (/5,6/)
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INTEGER(SIZE_T) max_len
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!
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! Initialize the vl_int_data array.
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!
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do i = 1, 6
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do j = 1, 5
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vl_int_data(j,i) = -100
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end do
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end do
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do i = 2, 6
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do j = 1, i-1
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vl_int_data(j,i) = i-1
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end do
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end do
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do i = 1,6
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len(i) = i-1
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end do
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!
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! Create a new file using default properties.
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!
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CALL h5_fixname_f(filename, fix_filename, H5P_DEFAULT_F, error)
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if (error .ne. 0) then
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write(*,*) "Cannot modify filename"
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stop
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endif
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CALL h5fcreate_f(fix_filename, H5F_ACC_TRUNC_F, file_id, error)
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CALL check("h5fcreate_f", error, total_error)
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!
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! Create the dataspace.
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!
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CALL h5screate_simple_f(rank, dims, dspace_id, error)
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CALL check("h5screate_simple_f", error, total_error)
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!
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! Create the dataset with default properties.
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!
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CALL h5tvlen_create_f(H5T_NATIVE_INTEGER, vltype_id, error)
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CALL check("h5dvlen_create_f", error, total_error)
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CALL h5dcreate_f(file_id, dsetname, vltype_id, dspace_id, &
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dset_id, error)
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CALL check("h5dcreate_f", error, total_error)
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!
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! Write the dataset.
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!
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CALL h5dwrite_vl_f(dset_id, vltype_id, vl_int_data, data_dims, len, error)
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CALL check("h5dwrite_int_f", error, total_error)
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!
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! End access to the dataset and release resources used by it.
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!
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CALL h5dclose_f(dset_id, error)
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CALL check("h5dclose_f", error, total_error)
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!
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! Close the file.
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!
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CALL h5fclose_f(file_id, error)
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CALL check("h5fclose_f", error, total_error)
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!
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! Open the existing file.
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!
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CALL h5fopen_f (fix_filename, H5F_ACC_RDWR_F, file_id, error)
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CALL check("h5fopen_f", error, total_error)
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!
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! Open the existing dataset.
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!
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CALL h5dopen_f(file_id, dsetname, dset_id, error)
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CALL check("h5dopen_f", error, total_error)
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CALL h5dvlen_get_max_len_f(dset_id, vltype_id, dspace_id, max_len, error)
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CALL check("h5dvlen_get_max_len_f", error, total_error)
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if(max_len .ne. data_dims(1)) then
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total_error = total_error + 1
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write(*,*) "Wrong number of elemets returned by h5dvlen_get_max_len_f"
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endif
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!
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! Read the dataset.
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!
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CALL h5dread_vl_f(dset_id, vltype_id, vl_int_data_out, data_dims, len_out, &
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error, mem_space_id = dspace_id, file_space_id = dspace_id)
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CALL check("h5dread_int_f", error, total_error)
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do i = 1, data_dims(2)
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do j = 1, len_out(i)
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if(vl_int_data(j,i) .ne. vl_int_data_out(j,i)) then
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total_error = total_error + 1
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write(*,*) "h5dread_vl_f returned incorrect data"
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endif
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enddo
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if (len(i) .ne. len_out(i)) then
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total_error = total_error + 1
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write(*,*) "h5dread_vl_f returned incorrect data"
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endif
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enddo
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!
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CALL h5dclose_f(dset_id, error)
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CALL check("h5dclose_f", error, total_error)
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CALL h5tclose_f(vltype_id, error)
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CALL check("h5tclose_f", error, total_error)
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!
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! Terminate access to the data space.
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!
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CALL h5sclose_f(dspace_id, error)
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CALL check("h5sclose_f", error, total_error)
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!
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! Close the file.
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!
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CALL h5fclose_f(file_id, error)
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CALL check("h5fclose_f", error, total_error)
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if(cleanup) CALL h5_cleanup_f(filename, H5P_DEFAULT_F, error)
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CALL check("h5_cleanup_f", error, total_error)
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RETURN
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END SUBROUTINE vl_test_integer
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SUBROUTINE vl_test_real(cleanup, total_error)
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USE HDF5 ! This module contains all necessary modules
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IMPLICIT NONE
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LOGICAL, INTENT(IN) :: cleanup
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INTEGER, INTENT(OUT) :: total_error
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CHARACTER(LEN=8), PARAMETER :: filename = "VLtypesR" ! File name
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CHARACTER(LEN=80) :: fix_filename
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CHARACTER(LEN=6), PARAMETER :: dsetname = "VLreal" ! Dataset name
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INTEGER(HID_T) :: file_id ! File identifier
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INTEGER(HID_T) :: dset_id ! Dataset identifier
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INTEGER(HID_T) :: dspace_id ! Dataspace identifier
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INTEGER(HID_T) :: vltype_id ! Datatype identifier
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INTEGER(HSIZE_T), DIMENSION(1) :: dims = (/6/) ! Dataset dimensions
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INTEGER(SIZE_T), DIMENSION(6) :: len ! Elements lengths
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INTEGER(SIZE_T), DIMENSION(6) :: len_out
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INTEGER :: rank = 1 ! Dataset rank
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REAL, DIMENSION(5,6) :: vl_real_data ! Data buffers
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REAL, DIMENSION(5,6) :: vl_real_data_out ! Data buffers
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INTEGER :: error ! Error flag
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INTEGER :: i, j !general purpose integers
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INTEGER(HSIZE_T), DIMENSION(2) :: data_dims = (/5,6/)
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INTEGER(SIZE_T) max_len
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2003-03-20 00:13:57 +08:00
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INTEGER(HID_T) :: vl_type_id
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LOGICAL :: vl_flag
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2003-03-06 04:18:31 +08:00
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!
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! Initialize the vl_int_data array.
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!
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do i = 1, 6
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do j = 1, 5
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vl_real_data(j,i) = -100.
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end do
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end do
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do i = 2, 6
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do j = 1, i-1
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vl_real_data(j,i) = i-1
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end do
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end do
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do i = 1,6
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len(i) = i-1
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end do
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!
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! Create a new file using default properties.
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!
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CALL h5_fixname_f(filename, fix_filename, H5P_DEFAULT_F, error)
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if (error .ne. 0) then
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write(*,*) "Cannot modify filename"
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stop
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endif
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CALL h5fcreate_f(fix_filename, H5F_ACC_TRUNC_F, file_id, error)
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CALL check("h5fcreate_f", error, total_error)
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!
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! Create the dataspace.
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!
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CALL h5screate_simple_f(rank, dims, dspace_id, error)
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CALL check("h5screate_simple_f", error, total_error)
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!
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! Create the dataset with default properties.
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!
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CALL h5tvlen_create_f(H5T_NATIVE_REAL, vltype_id, error)
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CALL check("h5dvlen_create_f", error, total_error)
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CALL h5dcreate_f(file_id, dsetname, vltype_id, dspace_id, &
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dset_id, error)
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CALL check("h5dcreate_f", error, total_error)
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CALL h5dget_type_f(dset_id, vl_type_id, error)
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CALL check("h5dget_type_f", error, total_error)
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CALL h5tis_variable_str_f( vl_type_id, vl_flag, error)
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CALL check("h5tis_variable_str_f", error, total_error)
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if( vl_flag ) then
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write(*,*) "type is wrong"
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total_error = total_error + 1
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endif
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2003-03-06 04:18:31 +08:00
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!
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! Write the dataset.
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!
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CALL h5dwrite_vl_f(dset_id, vltype_id, vl_real_data, data_dims, len, error)
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CALL check("h5dwrite_vl_real_f", error, total_error)
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!
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! End access to the dataset and release resources used by it.
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!
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CALL h5dclose_f(dset_id, error)
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CALL check("h5dclose_f", error, total_error)
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!
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! Close the file.
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!
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CALL h5fclose_f(file_id, error)
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CALL check("h5fclose_f", error, total_error)
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!
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! Open the existing file.
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!
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CALL h5fopen_f (fix_filename, H5F_ACC_RDWR_F, file_id, error)
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CALL check("h5fopen_f", error, total_error)
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!
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! Open the existing dataset.
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!
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CALL h5dopen_f(file_id, dsetname, dset_id, error)
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CALL check("h5dopen_f", error, total_error)
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CALL h5dvlen_get_max_len_f(dset_id, vltype_id, dspace_id, max_len, error)
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CALL check("h5dvlen_get_max_len_f", error, total_error)
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if(max_len .ne. data_dims(1)) then
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total_error = total_error + 1
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write(*,*) "Wrong number of elemets returned by h5dvlen_get_max_len_f"
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endif
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!
|
|
|
|
|
! Read the dataset.
|
|
|
|
|
!
|
|
|
|
|
CALL h5dread_vl_f(dset_id, vltype_id, vl_real_data_out, data_dims, len_out, &
|
|
|
|
|
error, mem_space_id = dspace_id, file_space_id = dspace_id)
|
|
|
|
|
CALL check("h5dread_real_f", error, total_error)
|
|
|
|
|
do i = 1, data_dims(2)
|
|
|
|
|
do j = 1, len_out(i)
|
|
|
|
|
if(vl_real_data(j,i) .ne. vl_real_data_out(j,i)) then
|
|
|
|
|
total_error = total_error + 1
|
|
|
|
|
write(*,*) "h5dread_vl_f returned incorrect data"
|
|
|
|
|
endif
|
|
|
|
|
enddo
|
|
|
|
|
if (len(i) .ne. len_out(i)) then
|
|
|
|
|
total_error = total_error + 1
|
|
|
|
|
write(*,*) "h5dread_vl_f returned incorrect data"
|
|
|
|
|
endif
|
|
|
|
|
enddo
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
!
|
|
|
|
|
CALL h5dclose_f(dset_id, error)
|
|
|
|
|
CALL check("h5dclose_f", error, total_error)
|
|
|
|
|
|
|
|
|
|
CALL h5tclose_f(vltype_id, error)
|
|
|
|
|
CALL check("h5tclose_f", error, total_error)
|
|
|
|
|
|
|
|
|
|
!
|
|
|
|
|
! Terminate access to the data space.
|
|
|
|
|
!
|
|
|
|
|
CALL h5sclose_f(dspace_id, error)
|
|
|
|
|
CALL check("h5sclose_f", error, total_error)
|
|
|
|
|
|
|
|
|
|
!
|
|
|
|
|
! Close the file.
|
|
|
|
|
!
|
|
|
|
|
CALL h5fclose_f(file_id, error)
|
|
|
|
|
CALL check("h5fclose_f", error, total_error)
|
|
|
|
|
if(cleanup) CALL h5_cleanup_f(filename, H5P_DEFAULT_F, error)
|
|
|
|
|
CALL check("h5_cleanup_f", error, total_error)
|
|
|
|
|
|
|
|
|
|
RETURN
|
|
|
|
|
END SUBROUTINE vl_test_real
|
|
|
|
|
|
|
|
|
|
SUBROUTINE vl_test_string(cleanup, total_error)
|
|
|
|
|
USE HDF5 ! This module contains all necessary modules
|
|
|
|
|
|
|
|
|
|
IMPLICIT NONE
|
|
|
|
|
LOGICAL, INTENT(IN) :: cleanup
|
|
|
|
|
INTEGER, INTENT(OUT) :: total_error
|
|
|
|
|
|
|
|
|
|
CHARACTER(LEN=8), PARAMETER :: filename = "VLtypesS" ! File name
|
|
|
|
|
CHARACTER(LEN=80) :: fix_filename
|
|
|
|
|
CHARACTER(LEN=9), PARAMETER :: dsetname = "VLstrings" ! Dataset name
|
|
|
|
|
|
|
|
|
|
INTEGER(HID_T) :: file_id ! File identifier
|
|
|
|
|
INTEGER(HID_T) :: dset_id ! Dataset identifier
|
|
|
|
|
INTEGER(HID_T) :: dspace_id ! Dataspace identifier
|
2008-05-01 03:51:13 +08:00
|
|
|
INTEGER(HID_T) :: vltype_id ! Datatype identifier
|
2003-03-06 04:18:31 +08:00
|
|
|
|
|
|
|
|
|
|
|
|
|
INTEGER(HSIZE_T), DIMENSION(1) :: dims = (/4/) ! Dataset dimensions
|
|
|
|
|
INTEGER(SIZE_T), DIMENSION(4) :: str_len ! Elements lengths
|
|
|
|
|
INTEGER(SIZE_T), DIMENSION(4) :: str_len_out
|
|
|
|
|
INTEGER :: rank = 1 ! Dataset rank
|
|
|
|
|
|
|
|
|
|
CHARACTER(LEN=10), DIMENSION(4) :: string_data ! Array of strings
|
|
|
|
|
CHARACTER(LEN=10), DIMENSION(4) :: string_data_out ! Data buffers
|
2008-05-01 03:51:13 +08:00
|
|
|
CHARACTER(LEN=10) :: tmp_str
|
2003-03-06 04:18:31 +08:00
|
|
|
INTEGER :: error ! Error flag
|
|
|
|
|
|
2008-05-01 03:51:13 +08:00
|
|
|
INTEGER :: i, j !general purpose integers
|
2003-03-06 04:18:31 +08:00
|
|
|
INTEGER(HSIZE_T), DIMENSION(2) :: data_dims = (/10,4/)
|
2003-03-20 00:13:57 +08:00
|
|
|
INTEGER(HID_T) :: vl_type_id
|
|
|
|
|
LOGICAL :: vl_flag
|
2003-03-06 04:18:31 +08:00
|
|
|
|
|
|
|
|
!
|
|
|
|
|
! Initialize the string_data array.
|
|
|
|
|
!
|
|
|
|
|
string_data(1) = 'This is '
|
|
|
|
|
str_len(1) = 8
|
|
|
|
|
string_data(2) = 'a fortran '
|
|
|
|
|
str_len(2) = 10
|
|
|
|
|
string_data(3) = 'strings '
|
|
|
|
|
str_len(3) = 8
|
|
|
|
|
string_data(4) = 'test. '
|
|
|
|
|
str_len(4) = 5
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
!
|
|
|
|
|
! Create a new file using default properties.
|
|
|
|
|
!
|
|
|
|
|
CALL h5_fixname_f(filename, fix_filename, H5P_DEFAULT_F, error)
|
|
|
|
|
if (error .ne. 0) then
|
|
|
|
|
write(*,*) "Cannot modify filename"
|
|
|
|
|
stop
|
|
|
|
|
endif
|
|
|
|
|
CALL h5fcreate_f(fix_filename, H5F_ACC_TRUNC_F, file_id, error)
|
|
|
|
|
CALL check("h5fcreate_f", error, total_error)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
!
|
|
|
|
|
! Create the dataspace.
|
|
|
|
|
!
|
|
|
|
|
CALL h5screate_simple_f(rank, dims, dspace_id, error)
|
|
|
|
|
CALL check("h5screate_simple_f", error, total_error)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
!
|
|
|
|
|
! Create the dataset with default properties.
|
|
|
|
|
!
|
|
|
|
|
CALL h5dcreate_f(file_id, dsetname, H5T_STRING, dspace_id, &
|
|
|
|
|
dset_id, error)
|
|
|
|
|
CALL check("h5dcreate_f", error, total_error)
|
2003-03-20 00:13:57 +08:00
|
|
|
!
|
|
|
|
|
! Check that dataset has a string datatype
|
|
|
|
|
!
|
|
|
|
|
CALL h5dget_type_f(dset_id, vl_type_id, error)
|
|
|
|
|
CALL check("h5dget_type_f", error, total_error)
|
|
|
|
|
CALL h5tis_variable_str_f( vl_type_id, vl_flag, error)
|
|
|
|
|
CALL check("h5tis_variable_str_f", error, total_error)
|
|
|
|
|
if( .NOT. vl_flag ) then
|
|
|
|
|
write(*,*) "type is wrong"
|
|
|
|
|
total_error = total_error + 1
|
|
|
|
|
endif
|
2003-03-06 04:18:31 +08:00
|
|
|
|
|
|
|
|
!
|
|
|
|
|
! Write the dataset.
|
|
|
|
|
!
|
|
|
|
|
CALL h5dwrite_vl_f(dset_id, H5T_STRING, string_data, data_dims, str_len, error)
|
|
|
|
|
CALL check("h5dwrite_string_f", error, total_error)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
!
|
|
|
|
|
! End access to the dataset and release resources used by it.
|
|
|
|
|
!
|
|
|
|
|
CALL h5dclose_f(dset_id, error)
|
|
|
|
|
CALL check("h5dclose_f", error, total_error)
|
|
|
|
|
|
|
|
|
|
!
|
|
|
|
|
! Close the file.
|
|
|
|
|
!
|
|
|
|
|
CALL h5fclose_f(file_id, error)
|
|
|
|
|
CALL check("h5fclose_f", error, total_error)
|
|
|
|
|
|
|
|
|
|
!
|
|
|
|
|
! Open the existing file.
|
|
|
|
|
!
|
|
|
|
|
CALL h5fopen_f (fix_filename, H5F_ACC_RDWR_F, file_id, error)
|
|
|
|
|
CALL check("h5fopen_f", error, total_error)
|
|
|
|
|
|
|
|
|
|
!
|
|
|
|
|
! Open the existing dataset.
|
|
|
|
|
!
|
|
|
|
|
CALL h5dopen_f(file_id, dsetname, dset_id, error)
|
|
|
|
|
CALL check("h5dopen_f", error, total_error)
|
|
|
|
|
!
|
|
|
|
|
! Read the dataset.
|
|
|
|
|
!
|
|
|
|
|
CALL h5dread_vl_f(dset_id, H5T_STRING, string_data_out, data_dims, &
|
|
|
|
|
str_len_out, error)
|
|
|
|
|
CALL check("h5dread_string_f", error, total_error)
|
|
|
|
|
do 100 i = 1, data_dims(2)
|
|
|
|
|
if(str_len(i) .ne. str_len_out(i)) then
|
|
|
|
|
total_error=total_error + 1
|
|
|
|
|
write(*,*) 'Returned string length is incorrect'
|
|
|
|
|
goto 100
|
|
|
|
|
endif
|
|
|
|
|
if(string_data(1)(1:str_len(i)) .ne. string_data_out(1)(1:str_len(i))) then
|
|
|
|
|
write(*,*) ' Returned string is wrong'
|
|
|
|
|
total_error = total_error + 1
|
|
|
|
|
endif
|
|
|
|
|
100 continue
|
|
|
|
|
|
|
|
|
|
!
|
|
|
|
|
CALL h5dclose_f(dset_id, error)
|
|
|
|
|
CALL check("h5dclose_f", error, total_error)
|
|
|
|
|
|
|
|
|
|
!
|
|
|
|
|
! Terminate access to the data space.
|
|
|
|
|
!
|
|
|
|
|
CALL h5sclose_f(dspace_id, error)
|
|
|
|
|
CALL check("h5sclose_f", error, total_error)
|
|
|
|
|
|
|
|
|
|
!
|
|
|
|
|
! Close the file.
|
|
|
|
|
!
|
|
|
|
|
CALL h5fclose_f(file_id, error)
|
|
|
|
|
CALL check("h5fclose_f", error, total_error)
|
|
|
|
|
if(cleanup) CALL h5_cleanup_f(filename, H5P_DEFAULT_F, error)
|
|
|
|
|
CALL check("h5_cleanup_f", error, total_error)
|
|
|
|
|
|
|
|
|
|
RETURN
|
|
|
|
|
END SUBROUTINE vl_test_string
|
|
|
|
|
|
