hdf5/tools/h5repack/h5repack.sh.in

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#! /bin/sh
#
# Copyright by the Board of Trustees of the University of Illinois.
# All rights reserved.
#
# This file is part of HDF5. The full HDF5 copyright notice, including
# terms governing use, modification, and redistribution, is contained in
# the files COPYING and Copyright.html. COPYING can be found at the root
# of the source code distribution tree; Copyright.html can be found at the
# root level of an installed copy of the electronic HDF5 document set and
# is linked from the top-level documents page. It can also be found at
# http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have
# access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu.
#
# Tests for the h5repack tool
# Determine if SZIP has the encoder available
USE_FILTER_SZIP_ENCODER="@USE_FILTER_SZIP_ENCODER@"
USE_FILTER_SZIP="@USE_FILTER_SZIP@"
H5REPACK=h5repack # The tool name
H5REPACK_BIN=`pwd`/$H5REPACK # The path of the tool binary
H5DIFF=../h5diff/h5diff # The h5diff tool name
H5DIFF_BIN=`pwd`/$H5DIFF # The path of the h5diff tool binary
nerrors=0
verbose=yes
# The build (current) directory might be different than the source directory.
#
if test -z "$srcdir"; then
srcdir=.
fi
test -d ../testfiles || mkdir ../testfiles
# Print a line-line message left justified in a field of 70 characters
# beginning with the word "Testing".
#
TESTING() {
SPACES=" "
echo "Testing $* $SPACES" | cut -c1-70 | tr -d '\012'
}
# Print a line-line message left justified in a field of 70 characters
# beginning with the word "Verifying".
#
VERIFY() {
SPACES=" "
echo "Testing h5diff output $* $SPACES" | cut -c1-70 | tr -d '\012'
}
# Print a message that a test has been skipped (because a required filter
# was unavailable)
SKIP() {
TESTING $H5REPACK $@
echo " -SKIP-"
}
# Call the h5diff tool
#
DIFFTEST()
{
VERIFY $@
if [ "`uname -s`" = "TFLOPS O/S" ]; then
$RUNSERIAL $H5DIFF_BIN $@
else
$RUNSERIAL $H5DIFF_BIN "$@"
fi
RET=$?
if [ $RET != 0 ] ; then
echo "*FAILED*"
nerrors="`expr $nerrors + 1`"
else
echo " PASSED"
fi
}
# Call h5repack
#
TOOLTEST()
{
# Run test.
# Tflops interprets "$@" as "" when no parameter is given (e.g., the
# case of missing file name). Changed it to use $@ till Tflops fixes it.
TESTING $H5REPACK $@
infile=$srcdir/../testfiles/$1
outfile=out.$1
shift
if [ "`uname -s`" = "TFLOPS O/S" ]; then
$RUNSERIAL $H5REPACK_BIN -i $infile -o $outfile $@
else
$RUNSERIAL $H5REPACK_BIN -i $infile -o $outfile "$@"
fi
RET=$?
if [ $RET != 0 ] ; then
echo "*FAILED*"
nerrors="`expr $nerrors + 1`"
else
echo " PASSED"
DIFFTEST $infile $outfile
fi
rm -f $outfile
}
#
# The tests
# We use the files generated by h5repacktst
# Each run generates "file4.out.h5" and the tool h5diff is used to
# compare the input and output files
#
# See which filters are usable (and skip tests for filters we
# don't have). Do this by searching H5pubconf.h to see which
# filters are defined.
# A filter value of 3 means the filter can read and write, 2
# is read-only, 1 is write-only, and 0 is not present.
# copy files
TOOLTEST test1.h5
TOOLTEST test3.h5
arg="test4.h5"
if test $USE_FILTER_SZIP_ENCODER = "yes" -o $USE_FILTER_SZIP = "no" ; then
TOOLTEST $arg
else
SKIP $arg
fi
#TOOLTEST test5.h5
# remove all filters
TOOLTEST test4.h5 -f NONE
# remove one filter
arg="test4.h5 -f dset_gzip:NONE"
if test $USE_FILTER_SZIP_ENCODER = "yes" -o $USE_FILTER_SZIP = "no" ; then
TOOLTEST $arg
else
SKIP $arg
fi
# gzip
arg="test4.h5 -f dset1:GZIP=9"
if test $USE_FILTER_SZIP_ENCODER = "yes" -o $USE_FILTER_SZIP = "no" ; then
TOOLTEST $arg
else
SKIP $arg
fi
TOOLTEST test4.h5 -f GZIP=1
# szip
arg1="test4.h5 -f dset1:SZIP=8"
arg2="test4.h5 -f SZIP=8"
if test $USE_FILTER_SZIP_ENCODER = "yes" -a $USE_FILTER_SZIP = "yes" ; then
TOOLTEST $arg1
TOOLTEST $arg2
else
SKIP $arg1
SKIP $arg2
fi
# shuffle
arg="test4.h5 -f dset1:SHUF"
if test $USE_FILTER_SZIP_ENCODER = "yes" -o $USE_FILTER_SZIP = "no" ; then
TOOLTEST $arg
else
SKIP $arg
fi
TOOLTEST test4.h5 -f SHUF
# fletcher
arg="test4.h5 -f dset1:FLET"
if test $USE_FILTER_SZIP_ENCODER = "yes" -o $USE_FILTER_SZIP = "no" ; then
TOOLTEST $arg
else
SKIP $arg
fi
TOOLTEST test4.h5 -f FLET
#layout chunk
arg1="test4.h5 -l dset1:CHUNK=20x10"
arg2="test4.h5 -l CHUNK=20x10"
if test $USE_FILTER_SZIP_ENCODER = "yes" -o $USE_FILTER_SZIP = "no" ; then
TOOLTEST $arg1
TOOLTEST $arg2
else
SKIP $arg1
SKIP $arg2
fi
#layout compact
arg1="test4.h5 -l dset1:COMPA"
arg2="test4.h5 -l COMPA"
if test $USE_FILTER_SZIP_ENCODER = "yes" -o $USE_FILTER_SZIP = "no" ; then
TOOLTEST $arg1
TOOLTEST $arg2
else
SKIP $arg1
SKIP $arg2
fi
#layout contiguous
arg1="test4.h5 -l dset1:CONTI"
arg2="test4.h5 -l CONTI"
if test $USE_FILTER_SZIP_ENCODER = "yes" -o $USE_FILTER_SZIP = "no" ; then
TOOLTEST $arg1
TOOLTEST $arg2
else
SKIP $arg1
SKIP $arg2
fi
#conversions
arg1="test4.h5 -l dset_compact:CONTI"
arg2="test4.h5 -l dset_compact:CHUNK=2x5"
arg3="test4.h5 -l dset_compact:COMPA"
arg4="test4.h5 -l dset_contiguous:COMPA"
arg5="test4.h5 -l dset_contiguous:CHUNK=3x6"
arg6="test4.h5 -l dset_contiguous:CONTI"
arg7="test4.h5 -l dset_chunk:COMPA"
arg8="test4.h5 -l dset_chunk:CONTI"
arg9="test4.h5 -l dset_chunk:CHUNK=18x13"
if test $USE_FILTER_SZIP_ENCODER = "yes" -o $USE_FILTER_SZIP = "no" ; then
TOOLTEST $arg1
TOOLTEST $arg2
TOOLTEST $arg3
TOOLTEST $arg4
TOOLTEST $arg5
TOOLTEST $arg6
TOOLTEST $arg7
TOOLTEST $arg8
TOOLTEST $arg9
else
SKIP $arg1
SKIP $arg2
SKIP $arg3
SKIP $arg4
SKIP $arg5
SKIP $arg6
SKIP $arg7
SKIP $arg8
SKIP $arg9
fi
#filters
arg1="test4.h5 -f dset1:SHUF -f dset1,dset2:GZIP=6"
arg2="test4.h5 -l dset1:CHUNK=20x10 -f dset1,dset2:SZIP=8"
if test $USE_FILTER_SZIP_ENCODER = "yes" -a $USE_FILTER_SZIP = "yes"; then
TOOLTEST $arg1
TOOLTEST $arg2
elif test $USE_FILTER_SZIP = "yes" ; then # SZIP has no encoder
SKIP $arg1
SKIP $arg2
else # SZIP is absent
TOOLTEST $arg1
SKIP $arg2
fi
#filter conversions
arg1="test4.h5 -f dset_gzip:SZIP=8"
arg2="test4.h5 -f dset_szip:GZIP=1"
arg3="test4.h5 -f dset_all:GZIP=1"
if test $USE_FILTER_SZIP_ENCODER = "yes" -a $USE_FILTER_SZIP = "yes" ; then
TOOLTEST $arg1
TOOLTEST $arg2
TOOLTEST $arg3
elif test $USE_FILTER_SZIP = "yes" ; then # SZIP has no encoder
SKIP $arg1
SKIP $arg2
SKIP $arg3
else # SZIP is absent
SKIP $arg1
TOOLTEST $arg2
TOOLTEST $arg3
fi
#limit
TOOLTEST test4.h5 -f GZIP=1 -m 1024
#file
arg="test4.h5 -e ../testfiles/h5repack_info.txt"
if test $USE_FILTER_SZIP_ENCODER = "yes" -a $USE_FILTER_SZIP = "yes" ; then
TOOLTEST $arg
else
SKIP $arg
fi
if test $nerrors -eq 0 ; then
echo "All $H5REPACK tests passed."
fi
exit $nerrors