hdf5/tools/lib/h5diff_attr.c

677 lines
25 KiB
C
Raw Normal View History

/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the COPYING file, which can be found at the root of the source code *
* distribution tree, or in https://www.hdfgroup.org/licenses. *
* If you do not have access to either file, you may request a copy from *
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
#include "H5private.h"
#include "h5tools.h"
#include "h5tools_utils.h"
#include "h5diff.h"
#define ATTR_NAME_MAX 255
typedef struct table_attr_t {
char *name;
2020-09-30 22:27:10 +08:00
unsigned exist[2];
} match_attr_t;
typedef struct table_attrs_t {
2020-09-30 22:27:10 +08:00
size_t size;
size_t nattrs;
size_t nattrs_only1;
size_t nattrs_only2;
match_attr_t *attrs;
} table_attrs_t;
/*-------------------------------------------------------------------------
* Function: table_attrs_init
*
* Purpose: Initialize the table
*
* Parameter:
* - tbl [OUT]
*
*------------------------------------------------------------------------*/
2020-09-30 22:27:10 +08:00
static void
table_attrs_init(table_attrs_t **tbl)
{
table_attrs_t *table_attrs = (table_attrs_t *)malloc(sizeof(table_attrs_t));
2020-09-30 22:27:10 +08:00
table_attrs->size = 0;
table_attrs->nattrs = 0;
table_attrs->nattrs_only1 = 0;
table_attrs->nattrs_only2 = 0;
2020-09-30 22:27:10 +08:00
table_attrs->attrs = NULL;
*tbl = table_attrs;
}
/*-------------------------------------------------------------------------
* Function: table_attrs_free
*
* Purpose: free given table
*
* Parameter:
* - table [IN]
*
*------------------------------------------------------------------------*/
2020-09-30 22:27:10 +08:00
static void
table_attrs_free(table_attrs_t *table)
{
unsigned int i;
if (table) {
if (table->attrs) {
for (i = 0; i < table->nattrs; i++) {
if (table->attrs[i].name) {
free(table->attrs[i].name);
}
} /* end for */
free(table->attrs);
table->attrs = NULL;
} /* end if */
free(table);
table = NULL;
}
}
/*-------------------------------------------------------------------------
* Function: table_attr_mark_exist
*
2017-05-20 00:35:07 +08:00
* Purpose: mark given attribute name to table as sign of exist
*
* Parameter:
* - exist [IN]
* - name [IN] : attribute name
* - table [OUT]
*
*------------------------------------------------------------------------*/
2020-09-30 22:27:10 +08:00
static void
table_attr_mark_exist(const unsigned *exist, char *name, table_attrs_t *table)
{
2020-09-30 22:27:10 +08:00
if (table->nattrs == table->size) {
match_attr_t *new_attrs;
table->size = MAX(1, table->size * 2);
new_attrs = (match_attr_t *)realloc(table->attrs, table->size * sizeof(match_attr_t));
2020-09-30 22:27:10 +08:00
if (new_attrs)
table->attrs = new_attrs;
} /* end if */
2020-09-30 22:27:10 +08:00
if (table->nattrs < table->size) {
size_t curr_val;
2020-09-30 22:27:10 +08:00
curr_val = table->nattrs;
table->attrs[curr_val].exist[0] = exist[0];
table->attrs[curr_val].exist[1] = exist[1];
2020-09-30 22:27:10 +08:00
if (name)
table->attrs[curr_val].name = (char *)strdup(name);
table->nattrs++;
}
}
/*-------------------------------------------------------------------------
* Function: build_match_list_attrs
*
* Purpose: get list of matching attribute name from obj1 and obj2
*
* Note:
* Find common attribute; the algorithm for search is referred from
* build_match_list() in h5diff.c .
*
* Parameter:
* table_out [OUT] : return the list
*------------------------------------------------------------------------*/
2020-09-30 22:27:10 +08:00
static herr_t
build_match_list_attrs(hid_t loc1_id, hid_t loc2_id, table_attrs_t **table_out, diff_opt_t *opts)
{
table_attrs_t *table_lp = NULL;
2020-09-30 22:27:10 +08:00
H5O_info2_t oinfo1, oinfo2; /* Object info */
hid_t attr1_id = H5I_INVALID_HID; /* attr ID */
hid_t attr2_id = H5I_INVALID_HID; /* attr ID */
size_t curr1 = 0;
size_t curr2 = 0;
unsigned infile[2];
char name1[ATTR_NAME_MAX];
char name2[ATTR_NAME_MAX];
int cmp;
unsigned i;
herr_t ret_value = SUCCEED;
H5TOOLS_START_DEBUG(" - errstat:%d", opts->err_stat);
2020-09-30 22:27:10 +08:00
if (H5Oget_info3(loc1_id, &oinfo1, H5O_INFO_NUM_ATTRS) < 0) {
H5TOOLS_GOTO_ERROR(FAIL, "H5Oget_info first object failed");
2019-12-20 06:29:35 +08:00
}
H5TOOLS_DEBUG("H5Oget_info3 loc1id=%d", oinfo1.num_attrs);
2020-09-30 22:27:10 +08:00
if (H5Oget_info3(loc2_id, &oinfo2, H5O_INFO_NUM_ATTRS) < 0) {
H5TOOLS_GOTO_ERROR(FAIL, "H5Oget_info second object failed");
2019-12-20 06:29:35 +08:00
}
H5TOOLS_DEBUG("H5Oget_info3 loc2id=%d", oinfo2.num_attrs);
table_attrs_init(&table_lp);
if (table_lp == NULL)
H5TOOLS_GOTO_ERROR(FAIL, "Table allocation failed");
/*--------------------------------------------------
* build the list
*/
2020-09-30 22:27:10 +08:00
while (curr1 < oinfo1.num_attrs && curr2 < oinfo2.num_attrs) {
H5TOOLS_DEBUG("list_attrs 1: %ld - %ld", curr1, oinfo1.num_attrs);
H5TOOLS_DEBUG("list_attrs 2: %ld - %ld", curr2, oinfo2.num_attrs);
2017-10-18 05:13:12 +08:00
/*------------------
2020-09-30 22:27:10 +08:00
* open attribute1 */
if ((attr1_id = H5Aopen_by_idx(loc1_id, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)curr1, H5P_DEFAULT,
H5P_DEFAULT)) < 0)
H5TOOLS_GOTO_ERROR(FAIL, "H5Aopen_by_idx first attribute failed");
/* get name */
2020-09-30 22:27:10 +08:00
if (H5Aget_name(attr1_id, (size_t)ATTR_NAME_MAX, name1) < 0)
H5TOOLS_GOTO_ERROR(FAIL, "H5Aget_name first attribute failed");
/*------------------
2020-09-30 22:27:10 +08:00
* open attribute2 */
if ((attr2_id = H5Aopen_by_idx(loc2_id, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)curr2, H5P_DEFAULT,
H5P_DEFAULT)) < 0)
H5TOOLS_GOTO_ERROR(FAIL, "H5Aopen_by_idx second attribute failed");
/* get name */
2020-09-30 22:27:10 +08:00
if (H5Aget_name(attr2_id, (size_t)ATTR_NAME_MAX, name2) < 0)
H5TOOLS_GOTO_ERROR(FAIL, "H5Aget_name second attribute failed");
/* criteria is string compare */
cmp = strcmp(name1, name2);
2020-09-30 22:27:10 +08:00
if (cmp == 0) {
infile[0] = 1;
infile[1] = 1;
table_attr_mark_exist(infile, name1, table_lp);
curr1++;
curr2++;
}
2020-09-30 22:27:10 +08:00
else if (cmp < 0) {
infile[0] = 1;
infile[1] = 0;
table_attr_mark_exist(infile, name1, table_lp);
table_lp->nattrs_only1++;
curr1++;
}
else {
infile[0] = 0;
infile[1] = 1;
table_attr_mark_exist(infile, name2, table_lp);
table_lp->nattrs_only2++;
curr2++;
}
/* close for next turn */
H5Aclose(attr1_id);
attr1_id = H5I_INVALID_HID;
H5Aclose(attr2_id);
attr2_id = H5I_INVALID_HID;
} /* end while */
/* list1 did not end */
infile[0] = 1;
infile[1] = 0;
2020-09-30 22:27:10 +08:00
while (curr1 < oinfo1.num_attrs) {
H5TOOLS_DEBUG("list_attrs 1: %ld - %ld", curr1, oinfo1.num_attrs);
2017-10-18 05:13:12 +08:00
/*------------------
2020-09-30 22:27:10 +08:00
* open attribute1 */
if ((attr1_id = H5Aopen_by_idx(loc1_id, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)curr1, H5P_DEFAULT,
H5P_DEFAULT)) < 0)
H5TOOLS_GOTO_ERROR(FAIL, "H5Aopen_by_idx first attribute failed");
/* get name */
2020-09-30 22:27:10 +08:00
if (H5Aget_name(attr1_id, (size_t)ATTR_NAME_MAX, name1) < 0)
H5TOOLS_GOTO_ERROR(FAIL, "H5Aget_name first attribute failed");
H5TOOLS_DEBUG("list_attrs 1 name - %s", name1);
table_attr_mark_exist(infile, name1, table_lp);
table_lp->nattrs_only1++;
curr1++;
/* close for next turn */
H5Aclose(attr1_id);
attr1_id = H5I_INVALID_HID;
}
/* list2 did not end */
infile[0] = 0;
infile[1] = 1;
2020-09-30 22:27:10 +08:00
while (curr2 < oinfo2.num_attrs) {
H5TOOLS_DEBUG("list_attrs 2: %ld - %ld", curr2, oinfo2.num_attrs);
/*------------------
2020-09-30 22:27:10 +08:00
* open attribute2 */
if ((attr2_id = H5Aopen_by_idx(loc2_id, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)curr2, H5P_DEFAULT,
H5P_DEFAULT)) < 0)
H5TOOLS_GOTO_ERROR(FAIL, "H5Aopen_by_idx second attribute failed");
/* get name */
2020-09-30 22:27:10 +08:00
if (H5Aget_name(attr2_id, (size_t)ATTR_NAME_MAX, name2) < 0)
H5TOOLS_GOTO_ERROR(FAIL, "H5Aget_name second attribute failed");
H5TOOLS_DEBUG("list_attrs 2 name - %s", name2);
table_attr_mark_exist(infile, name2, table_lp);
table_lp->nattrs_only2++;
curr2++;
/* close for next turn */
H5Aclose(attr2_id);
attr2_id = H5I_INVALID_HID;
}
/*------------------------------------------------------
* print the list
*/
2020-09-30 22:27:10 +08:00
if (opts->mode_verbose_level == 2) {
/* if '-v2' is detected */
parallel_print(" obj1 obj2\n");
parallel_print(" --------------------------------------\n");
2020-09-30 22:27:10 +08:00
for (i = 0; i < (unsigned int)table_lp->nattrs; i++) {
2019-12-12 00:44:56 +08:00
int c1, c2;
c1 = (table_lp->attrs[i].exist[0]) ? 'x' : ' ';
c2 = (table_lp->attrs[i].exist[1]) ? 'x' : ' ';
parallel_print("%5c %6c %-15s\n", c1, c2, table_lp->attrs[i].name);
} /* end for */
}
2020-09-30 22:27:10 +08:00
if (opts->mode_verbose_level >= 1)
2022-02-05 00:53:55 +08:00
parallel_print("Attributes status: %zu common, %zu only in obj1, %zu only in obj2\n",
2020-09-30 22:27:10 +08:00
table_lp->nattrs - table_lp->nattrs_only1 - table_lp->nattrs_only2,
table_lp->nattrs_only1, table_lp->nattrs_only2);
done:
*table_out = table_lp;
/* disable error reporting */
2020-09-30 22:27:10 +08:00
H5E_BEGIN_TRY
{
H5Aclose(attr1_id);
H5Aclose(attr2_id);
2020-09-30 22:27:10 +08:00
}
H5E_END_TRY
H5TOOLS_ENDDEBUG(" - errstat:%d", opts->err_stat);
return ret_value;
}
/*-------------------------------------------------------------------------
2019-12-20 06:29:35 +08:00
* Function: diff_attr_data
*
2019-12-20 06:29:35 +08:00
* Purpose: compare attribute data located in attr1_id and attr2_id, which are
* obtained from open attributes
*
* Return: number of differences found
*-------------------------------------------------------------------------
*/
2020-09-30 22:27:10 +08:00
hsize_t
diff_attr_data(hid_t attr1_id, hid_t attr2_id, const char *name1, const char *name2, const char *path1,
const char *path2, diff_opt_t *opts)
{
2020-09-30 22:27:10 +08:00
hid_t space1_id = H5I_INVALID_HID; /* space ID */
hid_t space2_id = H5I_INVALID_HID; /* space ID */
hid_t ftype1_id = H5I_INVALID_HID; /* file data type ID */
hid_t ftype2_id = H5I_INVALID_HID; /* file data type ID */
hid_t mtype1_id = H5I_INVALID_HID; /* memory data type ID */
hid_t mtype2_id = H5I_INVALID_HID; /* memory data type ID */
size_t msize1; /* memory size of memory type */
size_t msize2; /* memory size of memory type */
void *buf1 = NULL; /* data buffer */
void *buf2 = NULL; /* data buffer */
bool buf1hasdata = false; /* buffer has data */
bool buf2hasdata = false; /* buffer has data */
2020-09-30 22:27:10 +08:00
int rank1; /* rank of dataset */
int rank2; /* rank of dataset */
hsize_t dims1[H5S_MAX_RANK]; /* dimensions of dataset */
hsize_t dims2[H5S_MAX_RANK]; /* dimensions of dataset */
hsize_t nfound = 0;
2020-08-06 08:15:57 +08:00
size_t sz;
diff_err_t ret_value = opts->err_stat;
H5TOOLS_START_DEBUG(" - errstat:%d", opts->err_stat);
2019-12-20 06:29:35 +08:00
/* get the datatypes */
2020-09-30 22:27:10 +08:00
if ((ftype1_id = H5Aget_type(attr1_id)) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type first attribute failed");
2020-09-30 22:27:10 +08:00
if ((ftype2_id = H5Aget_type(attr2_id)) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type second attribute failed");
2019-12-20 06:29:35 +08:00
if (H5Tget_class(ftype1_id) == H5T_REFERENCE) {
2020-09-30 22:27:10 +08:00
if ((mtype1_id = H5Tcopy(H5T_STD_REF)) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tcopy(H5T_STD_REF) first attribute ftype failed");
2019-12-20 06:29:35 +08:00
}
else {
2020-09-30 22:27:10 +08:00
if ((mtype1_id = H5Tget_native_type(ftype1_id, H5T_DIR_DEFAULT)) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tget_native_type first attribute ftype failed");
2019-12-20 06:29:35 +08:00
}
if (H5Tget_class(ftype2_id) == H5T_REFERENCE) {
2020-09-30 22:27:10 +08:00
if ((mtype2_id = H5Tcopy(H5T_STD_REF)) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tcopy(H5T_STD_REF) second attribute ftype failed");
2019-12-20 06:29:35 +08:00
}
else {
2020-09-30 22:27:10 +08:00
if ((mtype2_id = H5Tget_native_type(ftype2_id, H5T_DIR_DEFAULT)) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tget_native_type second attribute ftype failed");
2019-12-20 06:29:35 +08:00
}
2020-09-30 22:27:10 +08:00
if ((msize1 = H5Tget_size(mtype1_id)) == 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tget_size first attribute mtype failed");
2020-09-30 22:27:10 +08:00
if ((msize2 = H5Tget_size(mtype2_id)) == 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tget_size second attribute mtype failed");
2019-12-20 06:29:35 +08:00
/* get the dataspace */
2020-09-30 22:27:10 +08:00
if ((space1_id = H5Aget_space(attr1_id)) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_space first attribute failed");
2020-09-30 22:27:10 +08:00
if ((space2_id = H5Aget_space(attr2_id)) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_space second attribute failed");
2019-12-20 06:29:35 +08:00
/* get dimensions */
2020-09-30 22:27:10 +08:00
if ((rank1 = H5Sget_simple_extent_dims(space1_id, dims1, NULL)) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sget_simple_extent_dims first attribute failed");
2020-09-30 22:27:10 +08:00
if ((rank2 = H5Sget_simple_extent_dims(space2_id, dims2, NULL)) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sget_simple_extent_dims second attribute failed");
2019-12-20 06:29:35 +08:00
/*----------------------------------------------------------------------
2020-09-30 22:27:10 +08:00
* check for comparable TYPE and SPACE
*----------------------------------------------------------------------
*/
H5TOOLS_DEBUG("Check for comparable TYPE and SPACE");
H5TOOLS_DEBUG("attr_names: %s - %s", name1, name2);
if (name1) {
sz = strlen(name1);
2020-08-06 08:15:57 +08:00
H5TOOLS_DEBUG("attr1_name: %s - %d", name1, sz);
if (sz > 0) {
opts->obj_name[0] = (char *)malloc(sz + 1);
strncpy(opts->obj_name[0], name1, sz + 1);
}
}
if (name2) {
sz = strlen(name2);
2020-08-06 08:15:57 +08:00
H5TOOLS_DEBUG("attr2_name: %s - %d", name2, sz);
if (sz > 0) {
opts->obj_name[1] = (char *)malloc(sz + 1);
strncpy(opts->obj_name[1], name2, sz + 1);
}
}
H5TOOLS_DEBUG("attr_names: %s - %s", opts->obj_name[0], opts->obj_name[1]);
2019-12-20 06:29:35 +08:00
/* pass dims1 and dims2 for maxdims as well since attribute's maxdims
2020-09-30 22:27:10 +08:00
* are always same */
if (diff_can_type(ftype1_id, ftype2_id, rank1, rank2, dims1, dims2, dims1, dims2, opts, 0) == 1) {
2020-08-06 08:15:57 +08:00
int j;
2019-12-20 06:29:35 +08:00
/*-----------------------------------------------------------------
2020-09-30 22:27:10 +08:00
* "upgrade" the smaller memory size
*------------------------------------------------------------------
*/
if (FAIL == match_up_memsize(ftype1_id, ftype2_id, &mtype1_id, &mtype2_id, &msize1, &msize2))
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "match_up_memsize failed");
2019-12-20 06:29:35 +08:00
H5TOOLS_DEBUG("initialize read");
2019-12-20 06:29:35 +08:00
/*---------------------------------------------------------------------
2020-09-30 22:27:10 +08:00
* initialize diff_opt_t structure for dimensions
*----------------------------------------------------------------------
*/
opts->nelmts = 1;
2020-09-30 22:27:10 +08:00
for (j = 0; j < rank1; j++) {
opts->dims[j] = dims1[j];
opts->nelmts *= dims1[j];
}
opts->rank = rank1;
2020-07-31 00:25:24 +08:00
init_acc_pos((unsigned)opts->rank, opts->dims, opts->acc, opts->pos, opts->p_min_idx);
2019-12-20 06:29:35 +08:00
/*---------------------------------------------------------------------
2020-09-30 22:27:10 +08:00
* read
*----------------------------------------------------------------------
*/
buf1 = (void *)calloc((size_t)(opts->nelmts), msize1);
buf2 = (void *)calloc((size_t)(opts->nelmts), msize2);
H5TOOLS_DEBUG("attr buffer size %ld * %ld", opts->nelmts, msize1);
2020-09-30 22:27:10 +08:00
if (buf1 == NULL || buf2 == NULL) {
2019-12-20 06:29:35 +08:00
parallel_print("cannot read into memory\n");
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "buffer allocation failed");
2019-12-20 06:29:35 +08:00
}
2020-09-30 22:27:10 +08:00
if (H5Aread(attr1_id, mtype1_id, buf1) < 0) {
2019-12-20 06:29:35 +08:00
parallel_print("Failed reading attribute1 %s\n", name1);
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type first attribute failed");
2019-12-20 06:29:35 +08:00
}
else
buf1hasdata = true;
H5TOOLS_DEBUG("attr H5Aread 1");
2019-12-20 06:29:35 +08:00
2020-09-30 22:27:10 +08:00
if (H5Aread(attr2_id, mtype2_id, buf2) < 0) {
2019-12-20 06:29:35 +08:00
parallel_print("Failed reading attribute2 %s\n", name2);
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type second attribute failed");
2019-12-20 06:29:35 +08:00
}
else
buf2hasdata = true;
H5TOOLS_DEBUG("attr H5Aread 2");
2019-12-20 06:29:35 +08:00
/* format output string */
if (opts->obj_name[0] != NULL)
free(opts->obj_name[0]);
opts->obj_name[0] = NULL;
if (opts->obj_name[1] != NULL)
free(opts->obj_name[1]);
opts->obj_name[1] = NULL;
H5TOOLS_DEBUG("attr_names: %s - %s : %s - %s", name1, name2, path1, path2);
if (name1) {
sz = strlen(name1) + strlen(path1) + 7;
2020-08-06 08:15:57 +08:00
H5TOOLS_DEBUG("attr1_name: %s - %d", name1, sz);
opts->obj_name[0] = (char *)calloc(sz + 1, sizeof(char));
snprintf(opts->obj_name[0], sz, "%s of <%s>", name1, path1);
2020-08-06 08:15:57 +08:00
opts->obj_name[0][sz] = '\0';
}
if (name2) {
sz = strlen(name2) + strlen(path2) + 7;
2020-08-06 08:15:57 +08:00
H5TOOLS_DEBUG("attr2_name: %s - %d", name2, sz);
opts->obj_name[1] = (char *)calloc(sz + 1, sizeof(char));
snprintf(opts->obj_name[1], sz, "%s of <%s>", name2, path2);
2020-08-06 08:15:57 +08:00
opts->obj_name[1][sz] = '\0';
}
2019-12-20 06:29:35 +08:00
/*---------------------------------------------------------------------
2020-09-30 22:27:10 +08:00
* array compare
*----------------------------------------------------------------------
*/
H5TOOLS_DEBUG("array compare %s - %s", opts->obj_name[0], opts->obj_name[1]);
opts->hs_nelmts = opts->nelmts;
2020-09-30 22:27:10 +08:00
opts->m_tid = mtype1_id;
/* initialize the current stripmine position; this is necessary to print the array indices */
for (j = 0; j < opts->rank; j++)
opts->sm_pos[j] = (hsize_t)0;
2019-12-20 06:29:35 +08:00
/* always print name */
/* verbose (-v) and report (-r) mode */
2020-09-30 22:27:10 +08:00
if (opts->mode_verbose || opts->mode_report) {
do_print_attrname("attribute", opts->obj_name[0], opts->obj_name[1]);
2019-12-20 06:29:35 +08:00
nfound = diff_array(buf1, buf2, opts, attr1_id, attr2_id);
2019-12-20 06:29:35 +08:00
print_found(nfound);
}
/* quiet mode (-q), just count differences */
2020-09-30 22:27:10 +08:00
else if (opts->mode_quiet) {
nfound = diff_array(buf1, buf2, opts, attr1_id, attr2_id);
2019-12-20 06:29:35 +08:00
}
/* the rest (-c, none, ...) */
else {
nfound = diff_array(buf1, buf2, opts, attr1_id, attr2_id);
2019-12-20 06:29:35 +08:00
/* print info if compatible and difference found */
if (nfound) {
do_print_attrname("attribute", opts->obj_name[0], opts->obj_name[1]);
2019-12-20 06:29:35 +08:00
print_found(nfound);
} /* end if */
2020-09-30 22:27:10 +08:00
} /* end else */
2019-12-20 06:29:35 +08:00
}
2020-09-30 22:27:10 +08:00
H5TOOLS_DEBUG("check for comparable TYPE and SPACE complete nfound:%d - errstat:%d", nfound,
opts->err_stat);
2019-12-20 06:29:35 +08:00
/*----------------------------------------------------------------------
2020-09-30 22:27:10 +08:00
* close
*----------------------------------------------------------------------
*/
if (opts->obj_name[0] != NULL)
free(opts->obj_name[0]);
2020-09-30 22:27:10 +08:00
opts->obj_name[0] = NULL;
if (opts->obj_name[1] != NULL)
free(opts->obj_name[1]);
2020-09-30 22:27:10 +08:00
opts->obj_name[1] = NULL;
2019-12-20 06:29:35 +08:00
/* Free buf1 and buf2, check both VLEN-data VLEN-string to reclaim any
2020-09-30 22:27:10 +08:00
* VLEN memory first */
if (true == h5tools_detect_vlen(mtype1_id))
2019-12-20 06:29:35 +08:00
H5Treclaim(mtype1_id, space1_id, H5P_DEFAULT, buf1);
free(buf1);
2019-12-20 06:29:35 +08:00
buf1 = NULL;
if (true == h5tools_detect_vlen(mtype2_id))
2019-12-20 06:29:35 +08:00
H5Treclaim(mtype2_id, space2_id, H5P_DEFAULT, buf2);
free(buf2);
2019-12-20 06:29:35 +08:00
buf2 = NULL;
2020-09-30 22:27:10 +08:00
if (H5Tclose(ftype1_id) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type first attribute failed");
2020-09-30 22:27:10 +08:00
if (H5Tclose(ftype2_id) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type second attribute failed");
2020-09-30 22:27:10 +08:00
if (H5Sclose(space1_id) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type first attribute failed");
2020-09-30 22:27:10 +08:00
if (H5Sclose(space2_id) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type second attribute failed");
2020-09-30 22:27:10 +08:00
if (H5Tclose(mtype1_id) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tclose first attribute mtype failed");
2020-09-30 22:27:10 +08:00
if (H5Tclose(mtype2_id) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tclose second attribute mtype failed");
2019-12-20 06:29:35 +08:00
done:
opts->err_stat = opts->err_stat | ret_value;
2020-09-30 22:27:10 +08:00
H5E_BEGIN_TRY
{
if (buf1) {
if (buf1hasdata && true == h5tools_detect_vlen(mtype1_id))
2019-12-20 06:29:35 +08:00
H5Treclaim(mtype1_id, space1_id, H5P_DEFAULT, buf1);
free(buf1);
2019-12-20 06:29:35 +08:00
} /* end if */
2020-09-30 22:27:10 +08:00
if (buf2) {
if (buf2hasdata && true == h5tools_detect_vlen(mtype2_id))
2019-12-20 06:29:35 +08:00
H5Treclaim(mtype2_id, space2_id, H5P_DEFAULT, buf2);
free(buf2);
2019-12-20 06:29:35 +08:00
} /* end if */
H5Tclose(ftype1_id);
H5Tclose(ftype2_id);
H5Tclose(mtype1_id);
H5Tclose(mtype2_id);
H5Sclose(space1_id);
H5Sclose(space2_id);
2020-09-30 22:27:10 +08:00
}
H5E_END_TRY
2019-12-20 06:29:35 +08:00
H5TOOLS_ENDDEBUG(" - errstat:%d", opts->err_stat);
2019-12-20 06:29:35 +08:00
return nfound;
}
/*-------------------------------------------------------------------------
* Function: diff_attr
*
* Purpose: compare attributes located in LOC1_ID and LOC2_ID, which are
* obtained either from
* loc_id = H5Gopen2(fid, name, H5P_DEFAULT);
* loc_id = H5Dopen2(fid, name);
* loc_id = H5Topen2(fid, name, H5P_DEFAULT);
*
* Return: number of differences found
*-------------------------------------------------------------------------
*/
2020-09-30 22:27:10 +08:00
hsize_t
diff_attr(hid_t loc1_id, hid_t loc2_id, const char *path1, const char *path2, diff_opt_t *opts)
2019-12-20 06:29:35 +08:00
{
2019-12-21 04:18:01 +08:00
table_attrs_t *match_list_attrs = NULL;
2020-09-30 22:27:10 +08:00
hid_t attr1_id = H5I_INVALID_HID; /* attr ID */
hid_t attr2_id = H5I_INVALID_HID; /* attr ID */
char *name1 = NULL;
char *name2 = NULL;
2020-09-30 22:27:10 +08:00
unsigned u; /* Local index variable */
hsize_t nfound = 0;
hsize_t nfound_total = 0;
2020-09-30 22:27:10 +08:00
diff_opt_t attr_opts;
diff_err_t ret_value = opts->err_stat;
2019-12-20 06:29:35 +08:00
H5TOOLS_START_DEBUG(" - errstat:%d", opts->err_stat);
2020-09-30 22:27:10 +08:00
attr_opts = *opts;
attr_opts.obj_name[0] = NULL;
attr_opts.obj_name[1] = NULL;
2017-05-20 00:35:07 +08:00
2020-09-30 22:27:10 +08:00
if (build_match_list_attrs(loc1_id, loc2_id, &match_list_attrs, &attr_opts) < 0) {
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "build_match_list_attrs failed");
2017-10-18 05:13:12 +08:00
}
2020-09-30 22:27:10 +08:00
H5TOOLS_DEBUG("check match_list_attrs - opts->contents:%d - errstat:%d", attr_opts.contents,
attr_opts.err_stat);
/* if detect any unique extra attr */
2020-09-30 22:27:10 +08:00
if (match_list_attrs->nattrs_only1 || match_list_attrs->nattrs_only2) {
H5TOOLS_DEBUG("attributes only in one file");
/* exit will be 1 */
attr_opts.contents = 0;
}
H5TOOLS_DEBUG("match_list_attrs info - opts->contents:%d", attr_opts.contents);
2020-09-30 22:27:10 +08:00
for (u = 0; u < (unsigned)match_list_attrs->nattrs; u++) {
H5TOOLS_DEBUG("match_list_attrs loop[%d] - errstat:%d", u, attr_opts.err_stat);
2020-09-30 22:27:10 +08:00
if ((match_list_attrs->attrs[u].exist[0]) && (match_list_attrs->attrs[u].exist[1])) {
name1 = name2 = match_list_attrs->attrs[u].name;
H5TOOLS_DEBUG("name - %s", name1);
/*--------------
2020-09-30 22:27:10 +08:00
* attribute 1 */
if ((attr1_id = H5Aopen(loc1_id, name1, H5P_DEFAULT)) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aopen first attribute failed");
/*--------------
2020-09-30 22:27:10 +08:00
* attribute 2 */
if ((attr2_id = H5Aopen(loc2_id, name2, H5P_DEFAULT)) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aopen second attribute failed");
H5TOOLS_DEBUG("got attributes");
nfound = diff_attr_data(attr1_id, attr2_id, name1, name2, path1, path2, &attr_opts);
2020-09-30 22:27:10 +08:00
if (H5Aclose(attr1_id) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type first attribute failed");
2020-09-30 22:27:10 +08:00
if (H5Aclose(attr2_id) < 0)
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type second attribute failed");
nfound_total += nfound;
}
} /* u */
done:
opts->print_header = attr_opts.print_header;
2020-09-30 22:27:10 +08:00
opts->contents = attr_opts.contents;
opts->not_cmp = attr_opts.not_cmp;
opts->err_stat = attr_opts.err_stat | ret_value;
2017-10-18 05:13:12 +08:00
2020-09-30 22:27:10 +08:00
H5E_BEGIN_TRY
{
table_attrs_free(match_list_attrs);
H5Aclose(attr1_id);
H5Aclose(attr2_id);
2020-09-30 22:27:10 +08:00
}
H5E_END_TRY
H5TOOLS_ENDDEBUG(" - errstat:%d", opts->err_stat);
return nfound_total;
}