hdf5/src/H5FS.c

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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*
* Programmer: Quincey Koziol <koziol@ncsa.uiuc.edu>
* Tuesday, May 2, 2006
*
* Purpose: Free space tracking functions.
*
* Note: (Used to be in the H5HFflist.c file, prior to the date above)
*
*/
/****************/
/* Module Setup */
/****************/
#define H5FS_PACKAGE /*suppress error about including H5FSpkg */
/***********/
/* Headers */
/***********/
#include "H5private.h" /* Generic Functions */
#include "H5Eprivate.h" /* Error handling */
#include "H5FSpkg.h" /* File free space */
#include "H5MFprivate.h" /* File memory management */
/****************/
/* Local Macros */
/****************/
/******************/
/* Local Typedefs */
/******************/
/********************/
/* Package Typedefs */
/********************/
/********************/
/* Local Prototypes */
/********************/
/*********************/
/* Package Variables */
/*********************/
/* Declare a free list to manage the H5FS_section_class_t sequence information */
H5FL_SEQ_DEFINE(H5FS_section_class_t);
/* Declare a free list to manage the H5FS_t struct */
H5FL_DEFINE(H5FS_t);
/*****************************/
/* Library Private Variables */
/*****************************/
/*******************/
/* Local Variables */
/*******************/
/*-------------------------------------------------------------------------
* Function: H5FS_create
*
* Purpose: Allocate & initialize file free space info
*
* Return: Success: Pointer to free space structure
*
* Failure: NULL
*
* Programmer: Quincey Koziol
* Tuesday, March 7, 2006
*
*-------------------------------------------------------------------------
*/
H5FS_t *
H5FS_create(H5F_t *f, hid_t dxpl_id, haddr_t *fs_addr, const H5FS_create_t *fs_create,
size_t nclasses, const H5FS_section_class_t *classes[], void *cls_init_udata)
{
H5FS_t *fspace = NULL; /* New free space structure */
H5FS_t *ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5FS_create, NULL)
/* Check arguments. */
HDassert(fs_addr);
HDassert(fs_create->shrink_percent);
HDassert(fs_create->shrink_percent < fs_create->expand_percent);
HDassert(fs_create->max_sect_size);
HDassert(nclasses == 0 || classes);
/*
* Allocate free space structure
*/
if(NULL == (fspace = H5FS_new(nclasses, classes, cls_init_udata)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed for free space free list")
/* Allocate space for the free space header */
if(HADDR_UNDEF == (fspace->addr = H5MF_alloc(f, H5FD_MEM_FSPACE_HDR, dxpl_id, (hsize_t)H5FS_HEADER_SIZE(f))))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "file allocation failed for free space header")
*fs_addr = fspace->addr;
/* Initialize creation information for free space manager */
fspace->client = fs_create->client;
fspace->shrink_percent = fs_create->shrink_percent;
fspace->expand_percent = fs_create->expand_percent;
fspace->max_sect_addr = fs_create->max_sect_addr;
fspace->max_sect_size = fs_create->max_sect_size;
/* Cache the new free space header (pinned) */
if(H5AC_set(f, dxpl_id, H5AC_FSPACE_HDR, fspace->addr, fspace, H5AC__PIN_ENTRY_FLAG) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTINIT, NULL, "can't add free space header to cache")
/* Set the return value */
ret_value = fspace;
done:
if(!ret_value && fspace)
(void)H5FS_cache_hdr_dest(f, fspace);
FUNC_LEAVE_NOAPI(ret_value)
} /* H5FS_create() */
/*-------------------------------------------------------------------------
* Function: H5FS_open
*
* Purpose: Open an existing file free space info structure on disk
*
* Return: Success: Pointer to free space structure
*
* Failure: NULL
*
* Programmer: Quincey Koziol
* Tuesday, May 2, 2006
*
*-------------------------------------------------------------------------
*/
H5FS_t *
H5FS_open(H5F_t *f, hid_t dxpl_id, haddr_t fs_addr, size_t nclasses,
const H5FS_section_class_t *classes[], void *cls_init_udata)
{
H5FS_t *fspace = NULL; /* New free space structure */
H5FS_prot_t fs_prot; /* Information for protecting free space manager */
unsigned fspace_status = 0; /* Free space header's status in the metadata cache */
H5FS_t *ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5FS_open, NULL)
#ifdef QAK
HDfprintf(stderr, "%s: Opening free space manager, nclasses = %Zu\n", FUNC, nclasses);
#endif /* QAK */
/* Check arguments. */
HDassert(H5F_addr_defined(fs_addr));
HDassert(nclasses);
HDassert(classes);
/* Initialize user data for protecting the free space manager */
fs_prot.nclasses = nclasses;
fs_prot.classes = classes;
fs_prot.cls_init_udata = cls_init_udata;
/* Protect the free space header */
if(NULL == (fspace = H5AC_protect(f, dxpl_id, H5AC_FSPACE_HDR, fs_addr, &fs_prot, NULL, H5AC_READ)))
HGOTO_ERROR(H5E_FSPACE, H5E_CANTPROTECT, NULL, "unable to load free space header")
#ifdef QAK
HDfprintf(stderr, "%s: fspace->sect_addr = %a\n", FUNC, fspace->sect_addr);
HDfprintf(stderr, "%s: fspace->sect_size = %Hu\n", FUNC, fspace->sect_size);
HDfprintf(stderr, "%s: fspace->alloc_sect_size = %Hu\n", FUNC, fspace->alloc_sect_size);
HDfprintf(stderr, "%s: fspace->sinfo = %p\n", FUNC, fspace->sinfo);
#endif /* QAK */
/* Check the free space header's status in the metadata cache */
if(H5AC_get_entry_status(f, fs_addr, &fspace_status) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTGET, NULL, "unable to check metadata cache status for free space header")
/* If the free space header isn't already pinned, pin it now */
/* (could still be pinned from it's section info still hanging around in the cache) */
if(!(fspace_status & H5AC_ES__IS_PINNED)) {
/* Pin free space header in the cache */
if(H5AC_pin_protected_entry(f, fspace) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTPIN, NULL, "unable to pin free space header")
} /* end if */
/* Unlock free space header, now pinned */
if(H5AC_unprotect(f, dxpl_id, H5AC_FSPACE_HDR, fs_addr, fspace, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTUNPROTECT, NULL, "unable to release free space header")
/* Set return value */
ret_value = fspace;
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5FS_open() */
/*-------------------------------------------------------------------------
* Function: H5FS_delete
*
* Purpose: Delete a free space manager on disk
*
* Return: Success: non-negative
*
* Failure: negative
*
* Programmer: Quincey Koziol
* Tuesday, May 30, 2006
*
*-------------------------------------------------------------------------
*/
herr_t
H5FS_delete(H5F_t *f, hid_t dxpl_id, haddr_t fs_addr)
{
H5FS_t *fspace = NULL; /* Free space header loaded from file */
H5FS_prot_t fs_prot; /* Temporary information for protecting free space header */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5FS_delete, FAIL)
#ifdef QAK
HDfprintf(stderr, "%s: Deleting free space manager\n", FUNC);
#endif /* QAK */
/* Check arguments. */
HDassert(f);
HDassert(H5F_addr_defined(fs_addr));
/* Initialize user data for protecting the free space manager */
/* (no class information necessary for delete) */
fs_prot.nclasses = 0;
fs_prot.classes = NULL;
fs_prot.cls_init_udata = NULL;
/* Protect the free space header */
if(NULL == (fspace = H5AC_protect(f, dxpl_id, H5AC_FSPACE_HDR, fs_addr, &fs_prot, NULL, H5AC_WRITE)))
HGOTO_ERROR(H5E_FSPACE, H5E_CANTPROTECT, FAIL, "unable to protect free space header")
/* Delete serialized section storage, if there are any */
#ifdef QAK
HDfprintf(stderr, "%s: fspace->sect_addr = %a\n", FUNC, fspace->sect_addr);
#endif /* QAK */
if(fspace->serial_sect_count > 0) {
unsigned sinfo_status = 0; /* Free space section info's status in the metadata cache */
/* Sanity check */
HDassert(H5F_addr_defined(fspace->sect_addr));
HDassert(fspace->sect_size > 0);
/* Check the free space section info's status in the metadata cache */
if(H5AC_get_entry_status(f, fspace->sect_addr, &sinfo_status) < 0)
HGOTO_ERROR(H5E_HEAP, H5E_CANTGET, FAIL, "unable to check metadata cache status for free space section info")
/* If the free space section info is in the cache, expunge it now */
if(sinfo_status & H5AC_ES__IN_CACHE) {
/* Sanity checks on direct block */
HDassert(!(sinfo_status & H5AC_ES__IS_PINNED));
HDassert(!(sinfo_status & H5AC_ES__IS_PROTECTED));
#ifdef QAK
HDfprintf(stderr, "%s: Expunging free space section info from cache\n", FUNC);
#endif /* QAK */
/* Evict the free space section info from the metadata cache */
if(H5AC_expunge_entry(f, dxpl_id, H5AC_FSPACE_SINFO, fspace->sect_addr) < 0)
HGOTO_ERROR(H5E_HEAP, H5E_CANTREMOVE, FAIL, "unable to remove free space section info from cache")
#ifdef QAK
HDfprintf(stderr, "%s: Done expunging free space section info from cache\n", FUNC);
#endif /* QAK */
} /* end if */
/* Release the space in the file */
if(H5MF_xfree(f, H5FD_MEM_FSPACE_SINFO, dxpl_id, fspace->sect_addr, fspace->alloc_sect_size) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTFREE, FAIL, "unable to release free space sections")
} /* end if */
/* Release header's disk space */
if(H5MF_xfree(f, H5FD_MEM_FSPACE_HDR, dxpl_id, fs_addr, (hsize_t)H5FS_HEADER_SIZE(f))<0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTFREE, FAIL, "unable to release free space header")
/* Release the free space header */
if(H5AC_unprotect(f, dxpl_id, H5AC_FSPACE_HDR, fs_addr, fspace, H5AC__DELETED_FLAG) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTUNPROTECT, FAIL, "unable to release free space header")
fspace = NULL;
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5FS_delete() */
/*-------------------------------------------------------------------------
* Function: H5FS_close
*
* Purpose: Destroy & deallocate free list structure, serializing sections
* in the bins
*
* Return: Success: non-negative
*
* Failure: negative
*
* Programmer: Quincey Koziol
* Tuesday, March 7, 2006
*
*-------------------------------------------------------------------------
*/
herr_t
H5FS_close(H5F_t *f, hid_t dxpl_id, H5FS_t *fspace)
{
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5FS_close, FAIL)
/* Check arguments. */
HDassert(f);
HDassert(fspace);
#ifdef QAK
HDfprintf(stderr, "%s: Entering\n", FUNC);
#endif /* QAK */
/* Check if section info is valid */
if(fspace->sinfo) {
HDassert(H5F_addr_defined(fspace->sect_addr));
/* Unpin the free space section info in the cache */
if(H5AC_unpin_entry(f, fspace->sinfo) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTUNPIN, FAIL, "unable to unpin free space section info")
/* If there aren't any sections being managed, free the space for the sections */
#ifdef QAK
HDfprintf(stderr, "%s: fspace->tot_sect_count = %Hu\n", FUNC, fspace->tot_sect_count);
#endif /* QAK */
if(fspace->tot_sect_count == 0) {
haddr_t old_addr; /* Old section info address */
HDassert(fspace->serial_sect_count == 0);
HDassert(fspace->ghost_sect_count == 0);
/* Free previous serialized sections disk space */
old_addr = fspace->sect_addr;
if(H5MF_xfree(f, H5FD_MEM_FSPACE_SINFO, dxpl_id, old_addr, fspace->alloc_sect_size) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTFREE, FAIL, "unable to release free space sections")
/* Reset section info */
fspace->sect_addr = HADDR_UNDEF;
fspace->alloc_sect_size = fspace->sect_size = 0;
/* Mark free space header as dirty */
if(H5AC_mark_pinned_or_protected_entry_dirty(f, fspace) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTMARKDIRTY, FAIL, "unable to mark free space header as dirty")
/* Evict the section info from the metadata cache */
if(H5AC_expunge_entry(f, dxpl_id, H5AC_FSPACE_SINFO, old_addr) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTREMOVE, FAIL, "unable to remove free space section info from cache")
} /* end if */
} /* end if */
else {
/* Unpin the free space header in the cache */
/* (the section info destructor would unpin it if the section info existed) */
if(H5AC_unpin_entry(f, fspace) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTUNPIN, FAIL, "unable to unpin free space header")
} /* end else */
/* Reset the header's pointer to the section info, so it will get pinned again
* if the free space header is still in the metadata cache when the free
* space manager is re-opened.
*/
fspace->sinfo = NULL;
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5FS_close() */
/*-------------------------------------------------------------------------
* Function: H5FS_new
*
* Purpose: Create new free space manager structure
*
* Return: Success: non-NULL, pointer to new free space manager struct
* Failure: NULL
*
* Programmer: Quincey Koziol
* Monday, July 31, 2006
*
*-------------------------------------------------------------------------
*/
H5FS_t *
H5FS_new(size_t nclasses, const H5FS_section_class_t *classes[],
void *cls_init_udata)
{
H5FS_t *fspace; /* Free space manager */
size_t u; /* Local index variable */
H5FS_t *ret_value; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5FS_new)
/* Check arguments. */
HDassert(nclasses == 0 || (nclasses > 0 && classes));
/*
* Allocate free space structure
*/
if(NULL == (fspace = H5FL_CALLOC(H5FS_t)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed for free space free list")
/* Set immutable free list parameters */
fspace->nclasses = nclasses;
if(nclasses > 0) {
if(NULL == (fspace->sect_cls = H5FL_SEQ_MALLOC(H5FS_section_class_t, nclasses)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed for free space section class array")
/* Initialize the section classes for this free space list */
for(u = 0; u < nclasses; u++) {
/* Make certain that section class type can be used as an array index into this array */
HDassert(u == classes[u]->type);
/* Copy the class information into the free space manager */
HDmemcpy(&fspace->sect_cls[u], classes[u], sizeof(H5FS_section_class_t));
/* Call the class initialization routine, if there is one */
if(fspace->sect_cls[u].init_cls)
if((fspace->sect_cls[u].init_cls)(&fspace->sect_cls[u], cls_init_udata) < 0)
HGOTO_ERROR(H5E_RESOURCE, H5E_CANTINIT, NULL, "unable to initialize section class")
} /* end for */
} /* end if */
/* Initialize non-zero information for new free space manager */
fspace->addr = HADDR_UNDEF;
fspace->sect_addr = HADDR_UNDEF;
/* Set return value */
ret_value = fspace;
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5FS_new() */
/*-------------------------------------------------------------------------
* Function: H5FS_size
*
* Purpose: Collect meta storage info used by the free space manager
*
* Return: Success: non-negative
* Failure: negative
*
* Programmer: Vailin Choi
* June 19, 2007
*
*-------------------------------------------------------------------------
*/
herr_t
H5FS_size(const H5F_t *f, const H5FS_t *fspace, hsize_t *meta_size)
{
FUNC_ENTER_NOAPI_NOFUNC(H5FS_size)
/*
* Check arguments.
*/
HDassert(f);
HDassert(fspace);
HDassert(meta_size);
/* Get the free space size info */
*meta_size += H5FS_HEADER_SIZE(f) + fspace->alloc_sect_size;
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5FS_size() */
#ifdef H5FS_DEBUG
/*-------------------------------------------------------------------------
* Function: H5FS_assert
*
* Purpose: Verify that the free space manager is mostly sane
*
* Return: Non-negative on success, negative on failure
*
* Programmer: Quincey Koziol
* koziol@hdfgroup.org
* Jul 17 2006
*
*-------------------------------------------------------------------------
*/
herr_t
H5FS_assert(const H5FS_t *fspace)
{
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5FS_assert)
#ifdef QAK
HDfprintf(stderr, "%s: fspace->hdr->tot_sect_count = %Hu\n", "H5FS_assert", fspace->hdr->tot_sect_count);
#endif /* QAK */
/* Sanity check sections */
H5FS_sect_assert(fspace);
/* General assumptions about the section size counts */
HDassert(fspace->sinfo->tot_size_count >= fspace->sinfo->serial_size_count);
HDassert(fspace->sinfo->tot_size_count >= fspace->sinfo->ghost_size_count);
/* General assumptions about the section counts */
HDassert(fspace->tot_sect_count >= fspace->serial_sect_count);
HDassert(fspace->tot_sect_count >= fspace->ghost_sect_count);
HDassert(fspace->tot_sect_count == (fspace->serial_sect_count + fspace->ghost_sect_count));
#ifdef QAK
HDassert(fspace->serial_sect_count > 0 || fspace->ghost_sect_count == 0);
#endif /* QAK */
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5FS_assert() */
#endif /* H5FS_DEBUG */