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hdf5/src/H5R.c

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[svn-r6546] Purpose: Update Description: Updated copyright statement in files which hadn't been updated yet. Platforms tested: Linux (Only comment change) Misc. update:
2003-04-01 02:30:57 +08:00
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
[svn-r743] Added H5I_type_t type to H5_trace and added H5Iget_type function call. Also checked in H5R skeleton files.
1998-10-08 05:04:51 +08:00
[svn-r2652] Purpose: Maintainance & performance enhancements Description: Re-arranged header files to protect private symbols better. Changed optimized regular hyperslab I/O to compute the offsets more efficiently from previous method of using matrix operations. Added sequential I/O operations at a more abstract level (at the same level as H5F_arr_read/write), to support the optimized hyperslab I/O. Platforms tested: Solaris 2.6 (baldric) & FreeBSD 4.1.1 (hawkwind)
2000-10-10 15:43:38 +08:00
#define H5F_PACKAGE /*suppress error about including H5Fpkg */
[svn-r8731] Purpose: Code cleanup & minor optimization Description: Re-work the way interface initialization routines are specified in the library to avoid the overhead of checking for them in routines where there is no interface initialization routine. This cleans up warnings with gcc 3.4, reduces the library binary size a bit (about 2-3%) and should speedup the library's execution slightly. Platforms tested: FreeBSD 4.10 (sleipnir) w/gcc34 h5committest
2004-06-23 23:36:35 +08:00
/* Interface initialization */
#define H5_INTERFACE_INIT_FUNC H5R_init_interface
/* Pablo information */
/* (Put before include files to avoid problems with inline functions) */
#define PABLO_MASK H5R_mask
[svn-r3781] Purpose: Update Description: Changed #include <hdf_file.h> construct to #include "hdf_file.h" so that the GNU compiler can more easily pick up the dependencies which it places in the .depend and Dependencies files. Also regenerated the Dependencies to go along with this. Platforms tested: Linux
2001-04-06 01:29:14 +08:00
#include "H5private.h" /* Generic Functions */
#include "H5Iprivate.h" /* ID Functions */
#include "H5Dprivate.h" /* Datasets */
#include "H5Eprivate.h" /* Error handling */
#include "H5Fpkg.h" /* Files */
#include "H5Gprivate.h" /* Groups */
#include "H5HGprivate.h" /* Global Heaps */
#include "H5MMprivate.h" /* Memory Management */
#include "H5Rprivate.h" /* References */
[svn-r8544] Purpose: Code optimization Description: Expand the use of macros to inline trivial function pointer lookup and calls to reduce the overall number of functions invoked during normal operation of the library. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.9 (sleipnir) w/parallel Too minor to require h5committest
2004-05-20 23:32:09 +08:00
#include "H5Sprivate.h" /* Dataspace functions */
[svn-r3781] Purpose: Update Description: Changed #include <hdf_file.h> construct to #include "hdf_file.h" so that the GNU compiler can more easily pick up the dependencies which it places in the .depend and Dependencies files. Also regenerated the Dependencies to go along with this. Platforms tested: Linux
2001-04-06 01:29:14 +08:00
#include "H5Tprivate.h" /* Datatypes */
[svn-r743] Added H5I_type_t type to H5_trace and added H5Iget_type function call. Also checked in H5R skeleton files.
1998-10-08 05:04:51 +08:00
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
/* Static functions */
[svn-r776] Fixed references, object references should be working now.
1998-10-23 06:49:16 +08:00
static herr_t H5R_create(void *ref, H5G_entry_t *loc, const char *name,
[svn-r6387] Purpose: Bug Fix Description: Metadata cache in parallel I/O can cause hangs in applications which perform independent I/O on chunked datasets, because the metadata cache can attempt to flush out dirty metadata from only a single process, instead of collectively from all processes. Solution: Pass a dataset transfer property list down from every API function which could possibly trigger metadata I/O. Then, split the metadata cache into two sets of entries to allow dirty metadata to be set aside when a hash table collision occurs during independent I/O. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} FreeBSD 4.7 (sleipnir) serial & parallel Misc. update: Updated release_docs/RELEASE
2003-02-11 01:26:09 +08:00
H5R_type_t ref_type, H5S_t *space, hid_t dxpl_id);
static hid_t H5R_dereference(H5F_t *file, hid_t dxpl_id, H5R_type_t ref_type, void *_ref);
static H5S_t * H5R_get_region(H5F_t *file, hid_t dxpl_id, H5R_type_t ref_type, void *_ref);
[svn-r7192] Purpose: Code cleanup Description: Clean up various minor warnings in the library. Platforms tested: FreeBSD 4.8 (sleipnir) too small to need h5committest
2003-07-10 03:16:17 +08:00
static H5G_obj_t H5R_get_obj_type(H5F_t *file, hid_t dxpl_id, H5R_type_t ref_type, void *_ref);
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
[svn-r743] Added H5I_type_t type to H5_trace and added H5Iget_type function call. Also checked in H5R skeleton files.
1998-10-08 05:04:51 +08:00
/*--------------------------------------------------------------------------
NAME
H5R_init_interface -- Initialize interface-specific information
USAGE
herr_t H5R_init_interface()
RETURNS
[svn-r797] Changed comments from returning "SUCCEED/FAIL" to "non-negative/negative" and also fixed a few more explicit checks against FAIL.
1998-10-27 05:18:54 +08:00
Non-negative on success/Negative on failure
[svn-r743] Added H5I_type_t type to H5_trace and added H5Iget_type function call. Also checked in H5R skeleton files.
1998-10-08 05:04:51 +08:00
DESCRIPTION
Initializes any interface-specific data or routines.
--------------------------------------------------------------------------*/
static herr_t
H5R_init_interface(void)
{
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
herr_t ret_value=SUCCEED; /* Return value */
[svn-r7917] Purpose: Code cleanup Description: Clean up compiler warnings, especially the 'FUNC' variable not used which comes out in production mode. Solution: Had to add a new FUNC_ENTER_NOAPI_NOINIT_NOFUNC macro for those non-API functions which don't need the 'FUNC' variable defined. (This will be _so_ much easier when C99 is standard on all our supposed platforms, since it has a __FUNC__ macro... ) Platforms tested: FreeBSD 4.9 (sleipnir) too minor for h5committest (although there were lots of files changed, the change was minor in each one)
2003-12-07 04:38:31 +08:00
FUNC_ENTER_NOAPI_NOINIT(H5R_init_interface);
[svn-r743] Added H5I_type_t type to H5_trace and added H5Iget_type function call. Also checked in H5R skeleton files.
1998-10-08 05:04:51 +08:00
/* Initialize the atom group for the file IDs */
[svn-r8707] Changed the way HDF5 handles hid_t's and added API functions to allow users to register IDs and ID types at runtime.
2004-06-19 00:56:04 +08:00
if (H5I_register_type(H5I_REFERENCE, H5I_REFID_HASHSIZE, H5R_RESERVED_ATOMS,
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
(H5I_free_t)NULL)<0)
HGOTO_ERROR (H5E_REFERENCE, H5E_CANTINIT, FAIL, "unable to initialize interface");
[svn-r743] Added H5I_type_t type to H5_trace and added H5Iget_type function call. Also checked in H5R skeleton files.
1998-10-08 05:04:51 +08:00
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
done:
[svn-r6266] Purpose: Code cleanup/new feature. Description: Split FUNC_LEAVE into API and non-API specific versions. This allows a solution to compiling this branch with C++, as well as reducing the size of the binaries produced. Platforms tested: FreeBSD 4.7 (sleipnir) w/serial, parallel (including MPE) & thread-safe
2003-01-11 04:26:02 +08:00
FUNC_LEAVE_NOAPI(ret_value);
[svn-r936] Changes since 19981119 ---------------------- ./src/H5.c ./src/H5A.c ./src/H5AC.c ./src/H5B.c ./src/H5D.c ./src/H5E.c ./src/H5F.c ./src/H5Farray.c ./src/H5Fcore.c ./src/H5Ffamily.c ./src/H5Fistore.c ./src/H5Flow.c ./src/H5Fmpio.c ./src/H5Fsec2.c ./src/H5Fsplit.c ./src/H5Fstdio.c ./src/H5G.c ./src/H5Gent.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5HG.c ./src/H5HL.c ./src/H5I.c ./src/H5Iprivate.h ./src/H5MF.c ./src/H5MM.c ./src/H5O.c ./src/H5Oattr.c ./src/H5Ocomp.c ./src/H5Ocont.c ./src/H5Odtype.c ./src/H5Oefl.c ./src/H5Ofill.c ./src/H5Olayout.c ./src/H5Omtime.c ./src/H5Oname.c ./src/H5Osdspace.c ./src/H5Oshared.c ./src/H5Ostab.c ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5Sall.c ./src/H5Shyper.c ./src/H5Smpio.c ./src/H5Snone.c ./src/H5Spoint.c ./src/H5Sselect.c ./src/H5T.c ./src/H5TB.c ./src/H5Tbit.c ./src/H5Tconv.c ./src/H5V.c ./src/H5Z.c ./src/H5detect.c ./src/H5private.h Most of these changes are because the `interface_initialize_g' variable change from hbool_t to int. It's a one line change. Changed the way the library is closed so we have more control over the order the interfaces are shut down. Instead of registering an atexit() function for every interface in some haphazard order we just register one: H5_term_library() which then calls the H5*_term_interface() functions in a well-defined order. If the library is closed and then reopened repeatedly by calling H5close() and H5open() in a loop we only add one copy of the library termination functions with atexit(). Termination is a two-step process in order to help detect programming errors that would cause an infinite loop caused by the termination of one interface waking up some other previously terminated interface. The first step terminates the interface and *marks it as unusable*. After all interfaces are terminated then we mark them all as usable again. The FUNC_ENTER() macro has been modified to return failure or to dump core (depending on whether NDEBUG is defined) if we try to call an interface while it's shutting down. ./src/H5.c The H5dont_atexit() function returns failure if it's called more than once or if it's called too late. However, the error stack is not automatically printed on failure because the library might not be initialized yet ./test/chunk.c ./test/flush1.c ./test/flush2.c ./test/iopipe.c ./test/overhead.c ./test/ragged.c Changed the extra cast for Win32 so we do floating point division again -- it was just confusion about precedence and associativity of casting and the C coercion rules. Removed extra carriage returns inserted by broken operating system. ./src/H5Ffamily.c Fixed an bug where H5F_fam_write() lowered the EOF marker for one of the family members causing H5F_fam_read() to read zeros. ./test/h5test.h [NEW] ./test/h5test.c [NEW] ./test/Makefile.in ./test/bittests.c ./test/cmpd_dset.c ./test/dsets.c ./test/dtypes.c ./test/extend.c ./test/external.c Support library for test files. This isn't done yet but Katie's contractions are ~10 minutes apart so I figured I better back this stuff up just in case I'm not here next week... Eventually all test files will understand HDF5_DRIVER to name the low level file driver and parameters so we can easily test various drivers. They will also understand HDF5_PREFIX to prepend to the beginning of file names which is necessary for testing ROMIO with various drivers. Also, the cleanup function will know how to use the file name prefix and will understand different file driver naming schemes like file families. I'm not sure they'll understand the `gsf:' type prefixes yet. Note, the external test is completely commented out because I'm in the middle of modifying it. It will still compile and run but it doesn't test anything at the moment.
1998-11-21 11:36:51 +08:00
}
[svn-r743] Added H5I_type_t type to H5_trace and added H5Iget_type function call. Also checked in H5R skeleton files.
1998-10-08 05:04:51 +08:00
/*--------------------------------------------------------------------------
NAME
H5R_term_interface
PURPOSE
Terminate various H5R objects
USAGE
void H5R_term_interface()
RETURNS
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
void
[svn-r743] Added H5I_type_t type to H5_trace and added H5Iget_type function call. Also checked in H5R skeleton files.
1998-10-08 05:04:51 +08:00
DESCRIPTION
Release the atom group and any other resources allocated.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
Can't report errors...
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
[svn-r4355] Purpose: Code cleanup (sorta) Description: When the first versions of the HDF5 library were designed, I remembered vividly the difficulties of porting code from a 32-bit platform to a 16-bit platform and asked that people use intn & uintn instead of int & unsigned int, respectively. However, in hindsight, this was overkill and unnecessary since we weren't going to be porting the HDF5 library to 16-bit architectures. Currently, the extra uintn & intn typedefs are causing problems for users who'd like to include both the HDF5 and HDF4 header files in one source module (like Kent's h4toh5 library). Solution: Changed the uintn & intn's to unsigned and int's respectively. Platforms tested: FreeBSD 4.4 (hawkwind)
2001-08-15 06:09:56 +08:00
int
[svn-r1169] ./configure.in ./configure [REGENERATED] ./src/H5D.c ./src/H5O.c Removed H5AC, H5B, and H5T from the default list of packages to debug (because they're pretty expensive debugging), and added H5O. Also fixed a bug for undefined variable in H5D when H5S debugging is turned on but H5T debugging is turned off. ./config/conclude.in Fixed installation of header files for building in a directory other than the source directory. This fixes a bug where H5config.h wasn't being installed. ./src/H5.c ./src/H5A.c ./src/H5D.c ./src/H5F.c ./src/H5G.c ./src/H5I.c ./src/H5Iprivate.h ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5T.c ./src/H5TB.c ./src/H5Tprivate.h ./src/H5Z.c ./src/H5detect.c ./src/H5private.h Changed the way the library shuts down again. Now it handles cycles between packages and isn't so sensitive to dependencies between packages. A package might shut down only to be restarted to process a request from some other package being shut down. Loops are detected after 100 iteractions and the shutdown is aborted with a message on standard error. This also makes it a lot easier to debug. ./src/H5A.c Fixed H5A_write() and H5A_read() so they pass a non-null background buffer to the conversion functions. This is necessary when an attribute has a compound data type. ./src/H5Flow.c ./src/H5Fprivate.h ./src/H5Fsec2.c Reindented new Win32 stuff. ./src/H5Odtype.c Fixed a bug when enumeration types are used in a compound data type. The byte pointer wasn't incremented after the type information was written. ./tools/h5ls.c Compound data types display their total size because it's not always obvious from looking at the members. Scalar attributes show their space as `scalar' instead of `{}'. The index value is not printed for attributes that have only a few values. Instead the word `Data:' is printed on the first line of attribute data. Named types display their data type only if verbose output was requested.
1999-03-30 19:38:34 +08:00
H5R_term_interface(void)
[svn-r743] Added H5I_type_t type to H5_trace and added H5Iget_type function call. Also checked in H5R skeleton files.
1998-10-08 05:04:51 +08:00
{
[svn-r4355] Purpose: Code cleanup (sorta) Description: When the first versions of the HDF5 library were designed, I remembered vividly the difficulties of porting code from a 32-bit platform to a 16-bit platform and asked that people use intn & uintn instead of int & unsigned int, respectively. However, in hindsight, this was overkill and unnecessary since we weren't going to be porting the HDF5 library to 16-bit architectures. Currently, the extra uintn & intn typedefs are causing problems for users who'd like to include both the HDF5 and HDF4 header files in one source module (like Kent's h4toh5 library). Solution: Changed the uintn & intn's to unsigned and int's respectively. Platforms tested: FreeBSD 4.4 (hawkwind)
2001-08-15 06:09:56 +08:00
int n=0;
[svn-r5467] Purpose: Code cleanup. Description: Took Robb's recent ideas for improving the FUNC_ENTER/FUNC_LEAVE macros equivalents in the SAF library and adapted them to our library. I added an additional macro which is equivalent to FUNC_ENTER: FUNC_ENTER_NOINIT - Has the API tracing code, etc. from FUNC_ENTER but none of the library or interface initialization code. This is to be used _only_ for static functions and those which explicitly cannot have the library or interface initialization code enabled (like the API termination routines, etc.). This allowed many more of the functions in the library [but not all yet :-(] to be wrapped with FUNC_ENTER[_NOINIT]/FUNC_LEAVE pairs. It also reduced the size of the library and executables (by cutting out a bunch of code which was never executed), I'll e-mail the exact results when I've finished editing it. Platforms tested: IRIX64 6.5 (modi4)
2002-05-29 02:17:12 +08:00
[svn-r7917] Purpose: Code cleanup Description: Clean up compiler warnings, especially the 'FUNC' variable not used which comes out in production mode. Solution: Had to add a new FUNC_ENTER_NOAPI_NOINIT_NOFUNC macro for those non-API functions which don't need the 'FUNC' variable defined. (This will be _so_ much easier when C99 is standard on all our supposed platforms, since it has a __FUNC__ macro... ) Platforms tested: FreeBSD 4.9 (sleipnir) too minor for h5committest (although there were lots of files changed, the change was minor in each one)
2003-12-07 04:38:31 +08:00
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5R_term_interface);
[svn-r1169] ./configure.in ./configure [REGENERATED] ./src/H5D.c ./src/H5O.c Removed H5AC, H5B, and H5T from the default list of packages to debug (because they're pretty expensive debugging), and added H5O. Also fixed a bug for undefined variable in H5D when H5S debugging is turned on but H5T debugging is turned off. ./config/conclude.in Fixed installation of header files for building in a directory other than the source directory. This fixes a bug where H5config.h wasn't being installed. ./src/H5.c ./src/H5A.c ./src/H5D.c ./src/H5F.c ./src/H5G.c ./src/H5I.c ./src/H5Iprivate.h ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5T.c ./src/H5TB.c ./src/H5Tprivate.h ./src/H5Z.c ./src/H5detect.c ./src/H5private.h Changed the way the library shuts down again. Now it handles cycles between packages and isn't so sensitive to dependencies between packages. A package might shut down only to be restarted to process a request from some other package being shut down. Loops are detected after 100 iteractions and the shutdown is aborted with a message on standard error. This also makes it a lot easier to debug. ./src/H5A.c Fixed H5A_write() and H5A_read() so they pass a non-null background buffer to the conversion functions. This is necessary when an attribute has a compound data type. ./src/H5Flow.c ./src/H5Fprivate.h ./src/H5Fsec2.c Reindented new Win32 stuff. ./src/H5Odtype.c Fixed a bug when enumeration types are used in a compound data type. The byte pointer wasn't incremented after the type information was written. ./tools/h5ls.c Compound data types display their total size because it's not always obvious from looking at the members. Scalar attributes show their space as `scalar' instead of `{}'. The index value is not printed for attributes that have only a few values. Instead the word `Data:' is printed on the first line of attribute data. Named types display their data type only if verbose output was requested.
1999-03-30 19:38:34 +08:00
[svn-r8731] Purpose: Code cleanup & minor optimization Description: Re-work the way interface initialization routines are specified in the library to avoid the overhead of checking for them in routines where there is no interface initialization routine. This cleans up warnings with gcc 3.4, reduces the library binary size a bit (about 2-3%) and should speedup the library's execution slightly. Platforms tested: FreeBSD 4.10 (sleipnir) w/gcc34 h5committest
2004-06-23 23:36:35 +08:00
if (H5_interface_initialize_g) {
[svn-r1169] ./configure.in ./configure [REGENERATED] ./src/H5D.c ./src/H5O.c Removed H5AC, H5B, and H5T from the default list of packages to debug (because they're pretty expensive debugging), and added H5O. Also fixed a bug for undefined variable in H5D when H5S debugging is turned on but H5T debugging is turned off. ./config/conclude.in Fixed installation of header files for building in a directory other than the source directory. This fixes a bug where H5config.h wasn't being installed. ./src/H5.c ./src/H5A.c ./src/H5D.c ./src/H5F.c ./src/H5G.c ./src/H5I.c ./src/H5Iprivate.h ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5T.c ./src/H5TB.c ./src/H5Tprivate.h ./src/H5Z.c ./src/H5detect.c ./src/H5private.h Changed the way the library shuts down again. Now it handles cycles between packages and isn't so sensitive to dependencies between packages. A package might shut down only to be restarted to process a request from some other package being shut down. Loops are detected after 100 iteractions and the shutdown is aborted with a message on standard error. This also makes it a lot easier to debug. ./src/H5A.c Fixed H5A_write() and H5A_read() so they pass a non-null background buffer to the conversion functions. This is necessary when an attribute has a compound data type. ./src/H5Flow.c ./src/H5Fprivate.h ./src/H5Fsec2.c Reindented new Win32 stuff. ./src/H5Odtype.c Fixed a bug when enumeration types are used in a compound data type. The byte pointer wasn't incremented after the type information was written. ./tools/h5ls.c Compound data types display their total size because it's not always obvious from looking at the members. Scalar attributes show their space as `scalar' instead of `{}'. The index value is not printed for attributes that have only a few values. Instead the word `Data:' is printed on the first line of attribute data. Named types display their data type only if verbose output was requested.
1999-03-30 19:38:34 +08:00
if ((n=H5I_nmembers(H5I_REFERENCE))) {
[svn-r8707] Changed the way HDF5 handles hid_t's and added API functions to allow users to register IDs and ID types at runtime.
2004-06-19 00:56:04 +08:00
H5I_clear_type(H5I_REFERENCE, FALSE);
[svn-r1169] ./configure.in ./configure [REGENERATED] ./src/H5D.c ./src/H5O.c Removed H5AC, H5B, and H5T from the default list of packages to debug (because they're pretty expensive debugging), and added H5O. Also fixed a bug for undefined variable in H5D when H5S debugging is turned on but H5T debugging is turned off. ./config/conclude.in Fixed installation of header files for building in a directory other than the source directory. This fixes a bug where H5config.h wasn't being installed. ./src/H5.c ./src/H5A.c ./src/H5D.c ./src/H5F.c ./src/H5G.c ./src/H5I.c ./src/H5Iprivate.h ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5T.c ./src/H5TB.c ./src/H5Tprivate.h ./src/H5Z.c ./src/H5detect.c ./src/H5private.h Changed the way the library shuts down again. Now it handles cycles between packages and isn't so sensitive to dependencies between packages. A package might shut down only to be restarted to process a request from some other package being shut down. Loops are detected after 100 iteractions and the shutdown is aborted with a message on standard error. This also makes it a lot easier to debug. ./src/H5A.c Fixed H5A_write() and H5A_read() so they pass a non-null background buffer to the conversion functions. This is necessary when an attribute has a compound data type. ./src/H5Flow.c ./src/H5Fprivate.h ./src/H5Fsec2.c Reindented new Win32 stuff. ./src/H5Odtype.c Fixed a bug when enumeration types are used in a compound data type. The byte pointer wasn't incremented after the type information was written. ./tools/h5ls.c Compound data types display their total size because it's not always obvious from looking at the members. Scalar attributes show their space as `scalar' instead of `{}'. The index value is not printed for attributes that have only a few values. Instead the word `Data:' is printed on the first line of attribute data. Named types display their data type only if verbose output was requested.
1999-03-30 19:38:34 +08:00
} else {
[svn-r8707] Changed the way HDF5 handles hid_t's and added API functions to allow users to register IDs and ID types at runtime.
2004-06-19 00:56:04 +08:00
H5I_dec_type_ref(H5I_REFERENCE);
[svn-r8731] Purpose: Code cleanup & minor optimization Description: Re-work the way interface initialization routines are specified in the library to avoid the overhead of checking for them in routines where there is no interface initialization routine. This cleans up warnings with gcc 3.4, reduces the library binary size a bit (about 2-3%) and should speedup the library's execution slightly. Platforms tested: FreeBSD 4.10 (sleipnir) w/gcc34 h5committest
2004-06-23 23:36:35 +08:00
H5_interface_initialize_g = 0;
[svn-r1169] ./configure.in ./configure [REGENERATED] ./src/H5D.c ./src/H5O.c Removed H5AC, H5B, and H5T from the default list of packages to debug (because they're pretty expensive debugging), and added H5O. Also fixed a bug for undefined variable in H5D when H5S debugging is turned on but H5T debugging is turned off. ./config/conclude.in Fixed installation of header files for building in a directory other than the source directory. This fixes a bug where H5config.h wasn't being installed. ./src/H5.c ./src/H5A.c ./src/H5D.c ./src/H5F.c ./src/H5G.c ./src/H5I.c ./src/H5Iprivate.h ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5T.c ./src/H5TB.c ./src/H5Tprivate.h ./src/H5Z.c ./src/H5detect.c ./src/H5private.h Changed the way the library shuts down again. Now it handles cycles between packages and isn't so sensitive to dependencies between packages. A package might shut down only to be restarted to process a request from some other package being shut down. Loops are detected after 100 iteractions and the shutdown is aborted with a message on standard error. This also makes it a lot easier to debug. ./src/H5A.c Fixed H5A_write() and H5A_read() so they pass a non-null background buffer to the conversion functions. This is necessary when an attribute has a compound data type. ./src/H5Flow.c ./src/H5Fprivate.h ./src/H5Fsec2.c Reindented new Win32 stuff. ./src/H5Odtype.c Fixed a bug when enumeration types are used in a compound data type. The byte pointer wasn't incremented after the type information was written. ./tools/h5ls.c Compound data types display their total size because it's not always obvious from looking at the members. Scalar attributes show their space as `scalar' instead of `{}'. The index value is not printed for attributes that have only a few values. Instead the word `Data:' is printed on the first line of attribute data. Named types display their data type only if verbose output was requested.
1999-03-30 19:38:34 +08:00
n = 1; /*H5I*/
}
[svn-r936] Changes since 19981119 ---------------------- ./src/H5.c ./src/H5A.c ./src/H5AC.c ./src/H5B.c ./src/H5D.c ./src/H5E.c ./src/H5F.c ./src/H5Farray.c ./src/H5Fcore.c ./src/H5Ffamily.c ./src/H5Fistore.c ./src/H5Flow.c ./src/H5Fmpio.c ./src/H5Fsec2.c ./src/H5Fsplit.c ./src/H5Fstdio.c ./src/H5G.c ./src/H5Gent.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5HG.c ./src/H5HL.c ./src/H5I.c ./src/H5Iprivate.h ./src/H5MF.c ./src/H5MM.c ./src/H5O.c ./src/H5Oattr.c ./src/H5Ocomp.c ./src/H5Ocont.c ./src/H5Odtype.c ./src/H5Oefl.c ./src/H5Ofill.c ./src/H5Olayout.c ./src/H5Omtime.c ./src/H5Oname.c ./src/H5Osdspace.c ./src/H5Oshared.c ./src/H5Ostab.c ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5Sall.c ./src/H5Shyper.c ./src/H5Smpio.c ./src/H5Snone.c ./src/H5Spoint.c ./src/H5Sselect.c ./src/H5T.c ./src/H5TB.c ./src/H5Tbit.c ./src/H5Tconv.c ./src/H5V.c ./src/H5Z.c ./src/H5detect.c ./src/H5private.h Most of these changes are because the `interface_initialize_g' variable change from hbool_t to int. It's a one line change. Changed the way the library is closed so we have more control over the order the interfaces are shut down. Instead of registering an atexit() function for every interface in some haphazard order we just register one: H5_term_library() which then calls the H5*_term_interface() functions in a well-defined order. If the library is closed and then reopened repeatedly by calling H5close() and H5open() in a loop we only add one copy of the library termination functions with atexit(). Termination is a two-step process in order to help detect programming errors that would cause an infinite loop caused by the termination of one interface waking up some other previously terminated interface. The first step terminates the interface and *marks it as unusable*. After all interfaces are terminated then we mark them all as usable again. The FUNC_ENTER() macro has been modified to return failure or to dump core (depending on whether NDEBUG is defined) if we try to call an interface while it's shutting down. ./src/H5.c The H5dont_atexit() function returns failure if it's called more than once or if it's called too late. However, the error stack is not automatically printed on failure because the library might not be initialized yet ./test/chunk.c ./test/flush1.c ./test/flush2.c ./test/iopipe.c ./test/overhead.c ./test/ragged.c Changed the extra cast for Win32 so we do floating point division again -- it was just confusion about precedence and associativity of casting and the C coercion rules. Removed extra carriage returns inserted by broken operating system. ./src/H5Ffamily.c Fixed an bug where H5F_fam_write() lowered the EOF marker for one of the family members causing H5F_fam_read() to read zeros. ./test/h5test.h [NEW] ./test/h5test.c [NEW] ./test/Makefile.in ./test/bittests.c ./test/cmpd_dset.c ./test/dsets.c ./test/dtypes.c ./test/extend.c ./test/external.c Support library for test files. This isn't done yet but Katie's contractions are ~10 minutes apart so I figured I better back this stuff up just in case I'm not here next week... Eventually all test files will understand HDF5_DRIVER to name the low level file driver and parameters so we can easily test various drivers. They will also understand HDF5_PREFIX to prepend to the beginning of file names which is necessary for testing ROMIO with various drivers. Also, the cleanup function will know how to use the file name prefix and will understand different file driver naming schemes like file families. I'm not sure they'll understand the `gsf:' type prefixes yet. Note, the external test is completely commented out because I'm in the middle of modifying it. It will still compile and run but it doesn't test anything at the moment.
1998-11-21 11:36:51 +08:00
}
[svn-r6266] Purpose: Code cleanup/new feature. Description: Split FUNC_LEAVE into API and non-API specific versions. This allows a solution to compiling this branch with C++, as well as reducing the size of the binaries produced. Platforms tested: FreeBSD 4.7 (sleipnir) w/serial, parallel (including MPE) & thread-safe
2003-01-11 04:26:02 +08:00
FUNC_LEAVE_NOAPI(n);
[svn-r936] Changes since 19981119 ---------------------- ./src/H5.c ./src/H5A.c ./src/H5AC.c ./src/H5B.c ./src/H5D.c ./src/H5E.c ./src/H5F.c ./src/H5Farray.c ./src/H5Fcore.c ./src/H5Ffamily.c ./src/H5Fistore.c ./src/H5Flow.c ./src/H5Fmpio.c ./src/H5Fsec2.c ./src/H5Fsplit.c ./src/H5Fstdio.c ./src/H5G.c ./src/H5Gent.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5HG.c ./src/H5HL.c ./src/H5I.c ./src/H5Iprivate.h ./src/H5MF.c ./src/H5MM.c ./src/H5O.c ./src/H5Oattr.c ./src/H5Ocomp.c ./src/H5Ocont.c ./src/H5Odtype.c ./src/H5Oefl.c ./src/H5Ofill.c ./src/H5Olayout.c ./src/H5Omtime.c ./src/H5Oname.c ./src/H5Osdspace.c ./src/H5Oshared.c ./src/H5Ostab.c ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5Sall.c ./src/H5Shyper.c ./src/H5Smpio.c ./src/H5Snone.c ./src/H5Spoint.c ./src/H5Sselect.c ./src/H5T.c ./src/H5TB.c ./src/H5Tbit.c ./src/H5Tconv.c ./src/H5V.c ./src/H5Z.c ./src/H5detect.c ./src/H5private.h Most of these changes are because the `interface_initialize_g' variable change from hbool_t to int. It's a one line change. Changed the way the library is closed so we have more control over the order the interfaces are shut down. Instead of registering an atexit() function for every interface in some haphazard order we just register one: H5_term_library() which then calls the H5*_term_interface() functions in a well-defined order. If the library is closed and then reopened repeatedly by calling H5close() and H5open() in a loop we only add one copy of the library termination functions with atexit(). Termination is a two-step process in order to help detect programming errors that would cause an infinite loop caused by the termination of one interface waking up some other previously terminated interface. The first step terminates the interface and *marks it as unusable*. After all interfaces are terminated then we mark them all as usable again. The FUNC_ENTER() macro has been modified to return failure or to dump core (depending on whether NDEBUG is defined) if we try to call an interface while it's shutting down. ./src/H5.c The H5dont_atexit() function returns failure if it's called more than once or if it's called too late. However, the error stack is not automatically printed on failure because the library might not be initialized yet ./test/chunk.c ./test/flush1.c ./test/flush2.c ./test/iopipe.c ./test/overhead.c ./test/ragged.c Changed the extra cast for Win32 so we do floating point division again -- it was just confusion about precedence and associativity of casting and the C coercion rules. Removed extra carriage returns inserted by broken operating system. ./src/H5Ffamily.c Fixed an bug where H5F_fam_write() lowered the EOF marker for one of the family members causing H5F_fam_read() to read zeros. ./test/h5test.h [NEW] ./test/h5test.c [NEW] ./test/Makefile.in ./test/bittests.c ./test/cmpd_dset.c ./test/dsets.c ./test/dtypes.c ./test/extend.c ./test/external.c Support library for test files. This isn't done yet but Katie's contractions are ~10 minutes apart so I figured I better back this stuff up just in case I'm not here next week... Eventually all test files will understand HDF5_DRIVER to name the low level file driver and parameters so we can easily test various drivers. They will also understand HDF5_PREFIX to prepend to the beginning of file names which is necessary for testing ROMIO with various drivers. Also, the cleanup function will know how to use the file name prefix and will understand different file driver naming schemes like file families. I'm not sure they'll understand the `gsf:' type prefixes yet. Note, the external test is completely commented out because I'm in the middle of modifying it. It will still compile and run but it doesn't test anything at the moment.
1998-11-21 11:36:51 +08:00
}
[svn-r743] Added H5I_type_t type to H5_trace and added H5Iget_type function call. Also checked in H5R skeleton files.
1998-10-08 05:04:51 +08:00
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
/*--------------------------------------------------------------------------
NAME
H5R_create
PURPOSE
Creates a particular kind of reference for the user
USAGE
herr_t H5R_create(ref, loc, name, ref_type, space)
[svn-r776] Fixed references, object references should be working now.
1998-10-23 06:49:16 +08:00
void *ref; OUT: Reference created
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
H5G_entry_t *loc; IN: File location used to locate object pointed to
const char *name; IN: Name of object at location LOC_ID of object
pointed to
H5R_type_t ref_type; IN: Type of reference to create
H5S_t *space; IN: Dataspace ID with selection, used for Dataset
Region references.
RETURNS
[svn-r797] Changed comments from returning "SUCCEED/FAIL" to "non-negative/negative" and also fixed a few more explicit checks against FAIL.
1998-10-27 05:18:54 +08:00
Non-negative on success/Negative on failure
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
DESCRIPTION
Creates a particular type of reference specified with REF_TYPE, in the
space pointed to by REF. The LOC_ID and NAME are used to locate the object
pointed to and the SPACE_ID is used to choose the region pointed to (for
Dataset Region references).
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static herr_t
[svn-r6387] Purpose: Bug Fix Description: Metadata cache in parallel I/O can cause hangs in applications which perform independent I/O on chunked datasets, because the metadata cache can attempt to flush out dirty metadata from only a single process, instead of collectively from all processes. Solution: Pass a dataset transfer property list down from every API function which could possibly trigger metadata I/O. Then, split the metadata cache into two sets of entries to allow dirty metadata to be set aside when a hash table collision occurs during independent I/O. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} FreeBSD 4.7 (sleipnir) serial & parallel Misc. update: Updated release_docs/RELEASE
2003-02-11 01:26:09 +08:00
H5R_create(void *_ref, H5G_entry_t *loc, const char *name, H5R_type_t ref_type, H5S_t *space, hid_t dxpl_id)
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
{
H5G_stat_t sb; /* Stat buffer for retrieving OID */
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
herr_t ret_value=SUCCEED; /* Return value */
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
[svn-r7917] Purpose: Code cleanup Description: Clean up compiler warnings, especially the 'FUNC' variable not used which comes out in production mode. Solution: Had to add a new FUNC_ENTER_NOAPI_NOINIT_NOFUNC macro for those non-API functions which don't need the 'FUNC' variable defined. (This will be _so_ much easier when C99 is standard on all our supposed platforms, since it has a __FUNC__ macro... ) Platforms tested: FreeBSD 4.9 (sleipnir) too minor for h5committest (although there were lots of files changed, the change was minor in each one)
2003-12-07 04:38:31 +08:00
FUNC_ENTER_NOAPI_NOINIT(H5R_create);
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
[svn-r776] Fixed references, object references should be working now.
1998-10-23 06:49:16 +08:00
assert(_ref);
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
assert(loc);
assert(name);
assert(ref_type>H5R_BADTYPE || ref_type<H5R_MAXTYPE);
[svn-r6387] Purpose: Bug Fix Description: Metadata cache in parallel I/O can cause hangs in applications which perform independent I/O on chunked datasets, because the metadata cache can attempt to flush out dirty metadata from only a single process, instead of collectively from all processes. Solution: Pass a dataset transfer property list down from every API function which could possibly trigger metadata I/O. Then, split the metadata cache into two sets of entries to allow dirty metadata to be set aside when a hash table collision occurs during independent I/O. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} FreeBSD 4.7 (sleipnir) serial & parallel Misc. update: Updated release_docs/RELEASE
2003-02-11 01:26:09 +08:00
if (H5G_get_objinfo (loc, name, 0, &sb, dxpl_id)<0)
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
HGOTO_ERROR (H5E_REFERENCE, H5E_NOTFOUND, FAIL, "unable to stat object");
[svn-r776] Fixed references, object references should be working now.
1998-10-23 06:49:16 +08:00
switch(ref_type) {
case H5R_OBJECT:
{
hobj_ref_t *ref=(hobj_ref_t *)_ref; /* Get pointer to correct type of reference struct */
[svn-r7334] Purpose: Bug fix Description: Object references were not getting written out correctly to the file, with recent changes to their memory structure. Solution: Convert the object references correctly. Platforms tested: h5committested
2003-08-11 20:43:04 +08:00
*ref=sb.objno;
[svn-r776] Fixed references, object references should be working now.
1998-10-23 06:49:16 +08:00
break;
}
case H5R_DATASET_REGION:
[svn-r904] Fixed bug in H5dont_atexit. Plugged a memory leak in the union of hyperslabs code. Checkpointing dataset region references, which are working, but not stored in file yet.
1998-11-13 08:28:29 +08:00
{
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
H5HG_t hobjid; /* Heap object ID */
[svn-r904] Fixed bug in H5dont_atexit. Plugged a memory leak in the union of hyperslabs code. Checkpointing dataset region references, which are working, but not stored in file yet.
1998-11-13 08:28:29 +08:00
hdset_reg_ref_t *ref=(hdset_reg_ref_t *)_ref; /* Get pointer to correct type of reference struct */
hssize_t buf_size; /* Size of buffer needed to serialize selection */
[svn-r925] Changes since 19981116 ---------------------- ./INSTALL.parallel [NEW] We're beginning to unify some of the parallel installation steps. This file will contain general information for installing the parallel library. It's not complete yet. ./configure.in ./configure [REGENERATED] ./src/H5config.h.in [REGENERATED] Check for xdr_int() in libnsl required on Solaris when linking with hdf4. It's found on the Irix system I tested which complains that `-lnsl' didn't resolve any symbols. Oh well. Fixed the order of searching for libdf and libmfhdf for hdf4 linking. ./configure.in ./configure [REGENERATED] ./src/H5config.h.in [REGENERATED] ./src/H5Z.c Check for compress() in libz in order to find older versions of the library that will still work for hdf4. Added a separate check for compress2() that hdf5 will use. ./configure.in ./configure [REGENERATED] ./src/H5config.h.in [REGENERATED] ./src/H5.c ./src/H5private.h ./src/H5A.c ./src/H5B.c ./src/H5Bprivate.h ./src/H5D.c ./src/H5F.c ./src/H5Farray.c ./src/H5Fcore.c ./src/H5Ffamily.c ./src/H5Fistore.c ./src/H5Flow.c ./src/H5Fmpio.c ./src/H5Fprivate.h ./src/H5Fsec2.c ./src/H5Fsplit.c ./src/H5Fstdio.c ./src/H5Gent.c ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5HG.c ./src/H5HL.c ./src/H5O.c ./src/H5Oattr.c ./src/H5Ocomp.c ./src/H5Ocont.c ./src/H5Odtype.c ./src/H5Oefl.c ./src/H5Ofill.c ./src/H5Olayout.c ./src/H5Omtime.c ./src/H5Oname.c ./src/H5Oprivate.h ./src/H5Osdspace.c ./src/H5Oshared.c ./src/H5Ostab.c ./src/H5R.c ./src/H5RA.c ./src/H5Sall.c ./src/H5Shyper.c ./src/H5Snone.c ./src/H5Spoint.c ./src/H5Sprivate.h ./src/H5Sselect.c ./src/H5T.c ./src/H5Tbit.c ./src/H5Tconv.c ./src/H5Tpkg.h ./src/H5V.c ./test/bittests.c ./test/gheap.c ./test/hyperslab.c ./test/istore.c ./test/tmeta.c ./test/trefer.c ./test/tselect.c ./tools/h5debug.c ./tools/h5tols.c Added checks for Posix.1g types like `int8_t'. If not defined then H5private.h defines them. Changed all `int8' etc. to `int8_t'. ./src/H5A.c ./src/H5D.c ./src/H5F.c ./src/H5G.c ./src/H5I.c ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5T.c ./src/H5TB.c ./src/H5Z.c Calling H5*_term_interface() resets interface_initialize_g to FALSE so a subsequent call to H5open() (implied or explicit) reinitializes global variables properly. ./src/H5private.h ./src/H5Oefl.c ./src/H5S.c Changed MAX_SIZET, MAX_SSIZET, MAX_HSIZET, and MAX_HSSIZET to SIZET_MAX, SSIZET_MAX, HSIZET_MAX, and HSSIZE_MAX to they match the Posix.1 constants in <limits.h>. ./src/H5T.c ./src/H5Tconv.c ./src/H5Tpkg.h ./src/H5Tprivate.h ./src/H5detect.c Added 36 more integer hardware conversion functions to the type conversion table for conversions to/from `long long' and `unsigned long long'. The `long long' names will be changed shortly to make them portable to Win32. Changed H5T_init() to H5T_native_open() and added an H5T_native_close() to open and close the predefined native data types. Increased the initial size of the type conversion table from 64 to 128 entries. Reordered the 90 new integer conversion functions so the names that are printed favor `int' over `short' or `long' when two of them are the same. ./test/dtypes.c Added hardware and software integer conversion tests for the 56 functions I added recently but not the additional 36 checked in this time. That will come next. Call H5close() after each test so type conversion statistics are easier to follow. Try this: $ HDF5_DEBUG=t ./dtypes Added more debugging output for when things go wrong. ./src/H5private.h Removed trailing carriage-returns inserted by broken operating system ;-)
1998-11-19 02:40:09 +08:00
uint8_t *p; /* Pointer to OID to store */
uint8_t *buf; /* Buffer to store serialized selection in */
[svn-r4355] Purpose: Code cleanup (sorta) Description: When the first versions of the HDF5 library were designed, I remembered vividly the difficulties of porting code from a 32-bit platform to a 16-bit platform and asked that people use intn & uintn instead of int & unsigned int, respectively. However, in hindsight, this was overkill and unnecessary since we weren't going to be porting the HDF5 library to 16-bit architectures. Currently, the extra uintn & intn typedefs are causing problems for users who'd like to include both the HDF5 and HDF4 header files in one source module (like Kent's h4toh5 library). Solution: Changed the uintn & intn's to unsigned and int's respectively. Platforms tested: FreeBSD 4.4 (hawkwind)
2001-08-15 06:09:56 +08:00
unsigned heapid_found; /* Flag for non-zero heap ID found */
unsigned u; /* local index */
[svn-r904] Fixed bug in H5dont_atexit. Plugged a memory leak in the union of hyperslabs code. Checkpointing dataset region references, which are working, but not stored in file yet.
1998-11-13 08:28:29 +08:00
/* Set up information for dataset region */
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
/* Return any previous heap block to the free list if we are garbage collecting */
[svn-r1572] Changes since 19990810 ---------------------- ./MANIFEST ./src/H5FDmulti.c [NEW] ./src/H5FDmulti.h [NEW] ./src/Makefile.in ./src/hdf5.h The split driver was reimplemented as a more general "multi" driver which is capable of splitting data into multiple files like the family driver except the partioning is done by memory usage type instead of address. The H5Pset_fapl_split() function just calls H5Pset_fapl_multi() with arguments which prepare to split the address space into two files: meta and raw data. This is the first version. I plan to allow the open() call to relax a bit which would allow one to open an hdf5 file when only the meta-data file is present. This would allow a very large file to be split and stored on tape and the relatively small meta file to be mirrored on disk to allow limited browsing of the file (any request for raw data would fail). ./src/H5private.h ./src/H5F.c ./src/H5FD.c ./src/H5FDprivate.h ./src/H5FDpublic.h ./src/H5FDcore.c ./src/H5FDfamily.c ./src/H5FDmpio.c ./src/H5FDsec2.c Added the ability for a file driver to store information in the superblock which would be needed if the file were opened again later for reading. The format is driver-defined which allows users to extend it however they like. ./doc/html/H5.format.html Added information about the new driver information block of the superblock. This is where file drivers store information they need in order to reopen the file later. ./src/H5F.c ./src/H5Fprivate.h ./src/H5FD.c ./src/H5FDprivate.h ./src/H5FDpublic.h ./src/H5FDcore.c ./src/H5FDfamily.c ./src/H5FDmpio.c ./src/H5FDsec2.c ./src/H5Fistore.c ./src/H5R.c The file access properties and the file access property list were decoupled, which allows the property list to more cleanly contain properties for various levels of the file and which allows the property list to be modified more cleanly when opening files. ./src/H5.c ./src/H5FDpublic.h Removed H5FD_MEM_META and H5FD_MEM_GROUP since they're never used. ./src/H5D.c Changed the way we detect the MPIO driver in all these special cases. ./src/H5F.c ./src/H5Rpublic.h ./test/tfile.c The default file sizeof(offset) was changed to be a function of haddr_t instead of hsize_t. THE H5RPUBLIC.H DEFINITIONS WILL HAVE PROBLEMS IF THE USER CREATES A FILE WITH NON-DEFAULT OFFSET AND SIZE SIZES! ./src/H5F.c Fixed an uninitialized memory access bug in file closing related to the VFL. ./src/H5T.c ./src/H5Tpublic.h Added an H5T_NATIVE_HADDR predefined datatype which corresponds to the `haddr_t' type. ./test/Makefile.in Reformatted long lines. ./test/big.c ./test/cmpd_dset.c ./test/dsets.c ./test/dtypes.c ./test/extend.c ./test/external.c Removed the H5F_ACC_DEBUG flag from file creation/open calls. ./test/big.c Plugged a memory leak. ./test/h5test.c Added support for the `multi' driver. Removed #warning about not having the stdio driver. Plans are to not implement it since the sec2 driver serves the same purpose and testing didn't show any difference in execution times between the two.
1999-08-18 03:12:59 +08:00
if(loc->file->shared->gc_ref) {
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
/* Check for an existing heap ID in the reference */
[svn-r9250] Purpose: Bug fix Description: Correct typedef for dataset region references to avoid struct alignment issues on Crays. Solution: Change the typedef for hdset_reg_ref_t from a struct to an array of unsigned char's of the correct size and propagate the appropriate adjustments around the code. Platforms tested: FreeBSD 4.10 (sleipnir) Linux 2.4 (verbena) w/fortran Cray T90 (subzero) w/fortran Cray SV1 (wind) w/fortran & parallel Cray T3E (cyclone) w/fortran & parallel
2004-09-14 13:04:25 +08:00
for(u=0, heapid_found=0, p=(uint8_t *)ref; u<H5R_DSET_REG_REF_BUF_SIZE; u++)
if(p[u]!=0) {
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
heapid_found=1;
break;
} /* end if */
if(heapid_found!=0) {
/* Return heap block to free list */
} /* end if */
} /* end if */
/* Zero the heap ID out, may leak heap space if user is re-using reference and doesn't have garbage collection on */
[svn-r9250] Purpose: Bug fix Description: Correct typedef for dataset region references to avoid struct alignment issues on Crays. Solution: Change the typedef for hdset_reg_ref_t from a struct to an array of unsigned char's of the correct size and propagate the appropriate adjustments around the code. Platforms tested: FreeBSD 4.10 (sleipnir) Linux 2.4 (verbena) w/fortran Cray T90 (subzero) w/fortran Cray SV1 (wind) w/fortran & parallel Cray T3E (cyclone) w/fortran & parallel
2004-09-14 13:04:25 +08:00
HDmemset(ref,H5R_DSET_REG_REF_BUF_SIZE,0);
[svn-r904] Fixed bug in H5dont_atexit. Plugged a memory leak in the union of hyperslabs code. Checkpointing dataset region references, which are working, but not stored in file yet.
1998-11-13 08:28:29 +08:00
/* Get the amount of space required to serialize the selection */
[svn-r8544] Purpose: Code optimization Description: Expand the use of macros to inline trivial function pointer lookup and calls to reduce the overall number of functions invoked during normal operation of the library. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.9 (sleipnir) w/parallel Too minor to require h5committest
2004-05-20 23:32:09 +08:00
if ((buf_size = H5S_SELECT_SERIAL_SIZE(space)) < 0)
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR(H5E_REFERENCE, H5E_CANTINIT, FAIL, "Invalid amount of space for serializing selection");
[svn-r904] Fixed bug in H5dont_atexit. Plugged a memory leak in the union of hyperslabs code. Checkpointing dataset region references, which are working, but not stored in file yet.
1998-11-13 08:28:29 +08:00
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
/* Increase buffer size to allow for the dataset OID */
buf_size+=sizeof(haddr_t);
[svn-r904] Fixed bug in H5dont_atexit. Plugged a memory leak in the union of hyperslabs code. Checkpointing dataset region references, which are working, but not stored in file yet.
1998-11-13 08:28:29 +08:00
/* Allocate the space to store the serialized information */
[svn-r4643] Purpose: Code cleanup Description: Windows is generating hundreds of warnings from some of the practices in the library. Mostly, they are because size_t is 32-bit and hsize_t is 64-bit on Windows and we were carelessly casting the larger values down to the smaller ones without checking for overflow. Also, some other small code cleanups,etc. Solution: Re-worked some algorithms to eliminate the casts and also added more overflow checking for assignments and function parameters which needed casts. Kent did most of the work, I just went over his changes and fit them into the the library code a bit better. Platforms tested: FreeBSD 4.4 (hawkwind)
2001-11-28 00:29:13 +08:00
H5_CHECK_OVERFLOW(buf_size,hssize_t,size_t);
if (NULL==(buf = H5MM_malloc((size_t)buf_size)))
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed");
[svn-r904] Fixed bug in H5dont_atexit. Plugged a memory leak in the union of hyperslabs code. Checkpointing dataset region references, which are working, but not stored in file yet.
1998-11-13 08:28:29 +08:00
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
/* Serialize information for dataset OID */
p=(uint8_t *)buf;
[svn-r7318] Purpose: Code cleanup Description: Switched 'hobj_ref_t' from funny structure with array inside to just be 'haddr_t', since that was equivalent and less confusing. Platforms tested: h5committested
2003-08-09 03:20:57 +08:00
H5F_addr_encode(loc->file,&p,sb.objno);
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
[svn-r904] Fixed bug in H5dont_atexit. Plugged a memory leak in the union of hyperslabs code. Checkpointing dataset region references, which are working, but not stored in file yet.
1998-11-13 08:28:29 +08:00
/* Serialize the selection */
[svn-r8544] Purpose: Code optimization Description: Expand the use of macros to inline trivial function pointer lookup and calls to reduce the overall number of functions invoked during normal operation of the library. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.9 (sleipnir) w/parallel Too minor to require h5committest
2004-05-20 23:32:09 +08:00
if (H5S_SELECT_SERIALIZE(space,p) < 0)
[svn-r4643] Purpose: Code cleanup Description: Windows is generating hundreds of warnings from some of the practices in the library. Mostly, they are because size_t is 32-bit and hsize_t is 64-bit on Windows and we were carelessly casting the larger values down to the smaller ones without checking for overflow. Also, some other small code cleanups,etc. Solution: Re-worked some algorithms to eliminate the casts and also added more overflow checking for assignments and function parameters which needed casts. Kent did most of the work, I just went over his changes and fit them into the the library code a bit better. Platforms tested: FreeBSD 4.4 (hawkwind)
2001-11-28 00:29:13 +08:00
HGOTO_ERROR(H5E_REFERENCE, H5E_CANTCOPY, FAIL, "Unable to serialize selection");
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
/* Save the serialized buffer for later */
[svn-r4643] Purpose: Code cleanup Description: Windows is generating hundreds of warnings from some of the practices in the library. Mostly, they are because size_t is 32-bit and hsize_t is 64-bit on Windows and we were carelessly casting the larger values down to the smaller ones without checking for overflow. Also, some other small code cleanups,etc. Solution: Re-worked some algorithms to eliminate the casts and also added more overflow checking for assignments and function parameters which needed casts. Kent did most of the work, I just went over his changes and fit them into the the library code a bit better. Platforms tested: FreeBSD 4.4 (hawkwind)
2001-11-28 00:29:13 +08:00
H5_CHECK_OVERFLOW(buf_size,hssize_t,size_t);
[svn-r6387] Purpose: Bug Fix Description: Metadata cache in parallel I/O can cause hangs in applications which perform independent I/O on chunked datasets, because the metadata cache can attempt to flush out dirty metadata from only a single process, instead of collectively from all processes. Solution: Pass a dataset transfer property list down from every API function which could possibly trigger metadata I/O. Then, split the metadata cache into two sets of entries to allow dirty metadata to be set aside when a hash table collision occurs during independent I/O. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} FreeBSD 4.7 (sleipnir) serial & parallel Misc. update: Updated release_docs/RELEASE
2003-02-11 01:26:09 +08:00
if(H5HG_insert(loc->file,dxpl_id,(size_t)buf_size,buf,&hobjid)<0)
[svn-r4643] Purpose: Code cleanup Description: Windows is generating hundreds of warnings from some of the practices in the library. Mostly, they are because size_t is 32-bit and hsize_t is 64-bit on Windows and we were carelessly casting the larger values down to the smaller ones without checking for overflow. Also, some other small code cleanups,etc. Solution: Re-worked some algorithms to eliminate the casts and also added more overflow checking for assignments and function parameters which needed casts. Kent did most of the work, I just went over his changes and fit them into the the library code a bit better. Platforms tested: FreeBSD 4.4 (hawkwind)
2001-11-28 00:29:13 +08:00
HGOTO_ERROR(H5E_REFERENCE, H5E_WRITEERROR, FAIL, "Unable to serialize selection");
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
/* Serialize the heap ID and index for storage in the file */
[svn-r9250] Purpose: Bug fix Description: Correct typedef for dataset region references to avoid struct alignment issues on Crays. Solution: Change the typedef for hdset_reg_ref_t from a struct to an array of unsigned char's of the correct size and propagate the appropriate adjustments around the code. Platforms tested: FreeBSD 4.10 (sleipnir) Linux 2.4 (verbena) w/fortran Cray T90 (subzero) w/fortran Cray SV1 (wind) w/fortran & parallel Cray T3E (cyclone) w/fortran & parallel
2004-09-14 13:04:25 +08:00
p=(uint8_t *)ref;
[svn-r1548] Changes since 19990727 ---------------------- ./src/H5.c [1.3] ./src/H5AC.c [1.3] ./src/H5ACprivate.h [1.3] ./src/H5B.c [1.3] ./src/H5Bprivate.h [1.3] ./src/H5D.c [1.3] ./src/H5F.c [1.3] ./src/H5Farray.c [1.3] ./src/H5Fcore.c [1.3] ./src/H5Ffamily.c [1.3] ./src/H5Fistore.c [1.3] ./src/H5Flow.c [1.3] ./src/H5Fmpio.c [1.3] ./src/H5Fprivate.h [1.3] ./src/H5Fsec2.c [1.3] ./src/H5Fsplit.c [1.3] ./src/H5Fstdio.c [1.3] ./src/H5G.c [1.3] ./src/H5Gent.c [1.3] ./src/H5Gnode.c [1.3] ./src/H5Gprivate.h [1.3] ./src/H5Gstab.c [1.3] ./src/H5HG.c [1.3] ./src/H5HGprivate.h [1.3] ./src/H5HL.c [1.3] ./src/H5HLprivate.h [1.3] ./src/H5MF.c [1.3] ./src/H5MFprivate.h [1.3] ./src/H5O.c [1.3] ./src/H5Oattr.c [1.3] ./src/H5Ocont.c [1.3] ./src/H5Odtype.c [1.3] ./src/H5Oefl.c [1.3] ./src/H5Olayout.c [1.3] ./src/H5Oprivate.h [1.3] ./src/H5Oshared.c [1.3] ./src/H5Ostab.c [1.3] ./src/H5P.c [1.3] ./src/H5R.c [1.3] ./src/H5Smpio.c [1.3] ./src/H5T.c [1.3] ./src/H5Tvlen.c [1.3] ./src/H5private.h [1.3] ./test/dtypes.c [1.3] ./test/gheap.c [1.3] ./test/istore.c [1.3] ./test/lheap.c [1.3] ./test/ohdr.c [1.3] ./tools/h5debug.c [1.3] File addresses (the `haddr_t' type) are passed by value instead of by reference. The type is no longer a struct. This is one of the preliminary changes needed for the Virtual File Layer stuff. ./src/H5Fprivate.h [1.3] ./src/H5Flow.c [1.3] Some address functions were rewritten as macros.
1999-07-29 02:25:43 +08:00
H5F_addr_encode(loc->file,&p,hobjid.addr);
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
INT32ENCODE(p,hobjid.idx);
/* Free the buffer we serialized data in */
H5MM_xfree(buf);
[svn-r904] Fixed bug in H5dont_atexit. Plugged a memory leak in the union of hyperslabs code. Checkpointing dataset region references, which are working, but not stored in file yet.
1998-11-13 08:28:29 +08:00
break;
}
[svn-r776] Fixed references, object references should be working now.
1998-10-23 06:49:16 +08:00
case H5R_INTERNAL:
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR(H5E_REFERENCE, H5E_UNSUPPORTED, FAIL, "Internal references are not yet supported");
[svn-r776] Fixed references, object references should be working now.
1998-10-23 06:49:16 +08:00
case H5R_BADTYPE:
case H5R_MAXTYPE:
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
default:
[svn-r776] Fixed references, object references should be working now.
1998-10-23 06:49:16 +08:00
assert("unknown reference type" && 0);
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR(H5E_REFERENCE, H5E_UNSUPPORTED, FAIL, "internal error (unknown reference type)");
[svn-r776] Fixed references, object references should be working now.
1998-10-23 06:49:16 +08:00
} /* end switch */
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
done:
[svn-r6266] Purpose: Code cleanup/new feature. Description: Split FUNC_LEAVE into API and non-API specific versions. This allows a solution to compiling this branch with C++, as well as reducing the size of the binaries produced. Platforms tested: FreeBSD 4.7 (sleipnir) w/serial, parallel (including MPE) & thread-safe
2003-01-11 04:26:02 +08:00
FUNC_LEAVE_NOAPI(ret_value);
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
} /* end H5R_create() */
/*--------------------------------------------------------------------------
NAME
H5Rcreate
PURPOSE
Creates a particular kind of reference for the user
USAGE
herr_t H5Rcreate(ref, loc_id, name, ref_type, space_id)
[svn-r776] Fixed references, object references should be working now.
1998-10-23 06:49:16 +08:00
void *ref; OUT: Reference created
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
hid_t loc_id; IN: Location ID used to locate object pointed to
const char *name; IN: Name of object at location LOC_ID of object
pointed to
H5R_type_t ref_type; IN: Type of reference to create
hid_t space_id; IN: Dataspace ID with selection, used for Dataset
Region references.
RETURNS
[svn-r797] Changed comments from returning "SUCCEED/FAIL" to "non-negative/negative" and also fixed a few more explicit checks against FAIL.
1998-10-27 05:18:54 +08:00
Non-negative on success/Negative on failure
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
DESCRIPTION
Creates a particular type of reference specified with REF_TYPE, in the
space pointed to by REF. The LOC_ID and NAME are used to locate the object
pointed to and the SPACE_ID is used to choose the region pointed to (for
Dataset Region references).
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
herr_t
[svn-r776] Fixed references, object references should be working now.
1998-10-23 06:49:16 +08:00
H5Rcreate(void *ref, hid_t loc_id, const char *name, H5R_type_t ref_type, hid_t space_id)
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
{
H5G_entry_t *loc = NULL; /* File location */
H5S_t *space = NULL; /* Pointer to dataspace containing region */
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
herr_t ret_value; /* Return value */
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
[svn-r5471] Purpose: Code cleanup Description: Broke the FUNC_ENTER macro into several macros, with more specialized uses (which followup mail will describe). This was designed to move most/all of the checks which could be done at compile time to that point, instead of needlessly performing them (over & over :-) at run-time. This reduces the library's size (and thus staticly linked binaries) and has a minor speedup effect also. Platforms tested: IRIX64 6.5 (modi4) with parallel & FORTRAN enabled, and additional testing on FreeBSD and Solaris immediately after the checkin.
2002-05-29 23:07:55 +08:00
FUNC_ENTER_API(H5Rcreate, FAIL);
[svn-r789] Changes since 19981023 ---------------------- ./MANIFEST ./test/Makefile.in ./test/flush1.c [NEW] ./test/flush2.c [NEW] Test to see if calling H5Fflush() results in a consistent file. ./src/H5.c ./src/H5A.c ./src/H5D.c ./src/H5Fistore.c ./src/H5I.c ./src/H5S.c ./src/H5Shyper.c ./src/H5Sselect.c ./src/H5TB.c Changed comparisons against SUCCEED and FAIL to >=0 and <0 in about 15 places. ./src/H5.c ./src/H5V.c ./src/H5detect.c ./src/H5private.h ./src/H5public.h ./test/big.c ./test/chunk.c ./test/cmpd_dset.c ./test/dsets.c ./test/dtypes.c ./test/external.c ./test/fillval.c ./test/iopipe.c ./test/links.c ./test/mount.c ./test/mtime.c ./test/ragged.c ./test/shtype.c ./test/unlink.c Removed ^M from the end of lines inserted on broken OS's ;-) ./src/H5private.h Changed c++ comments to c comments. ./src/H5R.c Added tracing macros.
1998-10-26 22:49:52 +08:00
H5TRACE5("e","xisRti",ref,loc_id,name,ref_type,space_id);
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
/* Check args */
if(ref==NULL)
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR (H5E_ARGS, H5E_BADVALUE, FAIL, "invalid reference pointer");
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
if (NULL==(loc=H5G_loc (loc_id)))
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR (H5E_ARGS, H5E_BADTYPE, FAIL, "not a location");
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
if (!name || !*name)
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no name given");
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
if(ref_type<=H5R_BADTYPE || ref_type>=H5R_MAXTYPE)
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR (H5E_ARGS, H5E_BADVALUE, FAIL, "invalid reference type");
[svn-r904] Fixed bug in H5dont_atexit. Plugged a memory leak in the union of hyperslabs code. Checkpointing dataset region references, which are working, but not stored in file yet.
1998-11-13 08:28:29 +08:00
if(ref_type!=H5R_OBJECT && ref_type!=H5R_DATASET_REGION)
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR (H5E_ARGS, H5E_UNSUPPORTED, FAIL, "reference type not supported");
[svn-r5840] Purpose: Code cleanup Description: Created a new H5I function which combined the some of the functionality of H5I_get_type and H5I_object: H5I_object_verify. Using this new function in the library trims another ~200 lines of code off the library and makes the resulting binaries smaller and faster also. Platforms tested: FreeBSD 4.6 (sleipnir)
2002-08-01 03:17:12 +08:00
if (space_id!=(-1) && (NULL==(space=H5I_object_verify(space_id,H5I_DATASPACE))))
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR (H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace");
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
/* Create reference */
[svn-r6387] Purpose: Bug Fix Description: Metadata cache in parallel I/O can cause hangs in applications which perform independent I/O on chunked datasets, because the metadata cache can attempt to flush out dirty metadata from only a single process, instead of collectively from all processes. Solution: Pass a dataset transfer property list down from every API function which could possibly trigger metadata I/O. Then, split the metadata cache into two sets of entries to allow dirty metadata to be set aside when a hash table collision occurs during independent I/O. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} FreeBSD 4.7 (sleipnir) serial & parallel Misc. update: Updated release_docs/RELEASE
2003-02-11 01:26:09 +08:00
if ((ret_value=H5R_create(ref,loc,name,ref_type,space, H5AC_dxpl_id))<0)
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
HGOTO_ERROR (H5E_REFERENCE, H5E_CANTINIT, FAIL, "unable to create reference");
done:
[svn-r6266] Purpose: Code cleanup/new feature. Description: Split FUNC_LEAVE into API and non-API specific versions. This allows a solution to compiling this branch with C++, as well as reducing the size of the binaries produced. Platforms tested: FreeBSD 4.7 (sleipnir) w/serial, parallel (including MPE) & thread-safe
2003-01-11 04:26:02 +08:00
FUNC_LEAVE_API(ret_value);
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
} /* end H5Rcreate() */
/*--------------------------------------------------------------------------
NAME
H5R_dereference
PURPOSE
Opens the HDF5 object referenced.
USAGE
hid_t H5R_dereference(ref)
[svn-r1385] Updated H5Rdereference, H5Rget_object_type and H5Rget_region to accept a location ID (i.e. a file or group ID) as well as the dataset ID. This should allow Dave to get the palettes stored in the file correctly and also enable Bob and/or Bruce's indexing stuff. This change should be folded into the documentation for these three functions for the release. Also, I fixed a number of bugs in the hyperslab and point selection iterators for H5Diterate and they are working correctly now.
1999-06-26 03:36:54 +08:00
H5F_t *file; IN: File the object being dereferenced is within
[svn-r776] Fixed references, object references should be working now.
1998-10-23 06:49:16 +08:00
H5R_type_t ref_type; IN: Type of reference
void *ref; IN: Reference to open.
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
RETURNS
[svn-r797] Changed comments from returning "SUCCEED/FAIL" to "non-negative/negative" and also fixed a few more explicit checks against FAIL.
1998-10-27 05:18:54 +08:00
Valid ID on success, Negative on failure
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
DESCRIPTION
Given a reference to some object, open that object and return an ID for
that object.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
Currently only set up to work with references to datasets
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static hid_t
[svn-r6387] Purpose: Bug Fix Description: Metadata cache in parallel I/O can cause hangs in applications which perform independent I/O on chunked datasets, because the metadata cache can attempt to flush out dirty metadata from only a single process, instead of collectively from all processes. Solution: Pass a dataset transfer property list down from every API function which could possibly trigger metadata I/O. Then, split the metadata cache into two sets of entries to allow dirty metadata to be set aside when a hash table collision occurs during independent I/O. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} FreeBSD 4.7 (sleipnir) serial & parallel Misc. update: Updated release_docs/RELEASE
2003-02-11 01:26:09 +08:00
H5R_dereference(H5F_t *file, hid_t dxpl_id, H5R_type_t ref_type, void *_ref)
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
{
[svn-r9329] Purpose: Feature Description: Datatypes and groups now use H5FO "file object" code that was previously only used by datasets. These objects will hold a file open if the file is closed but they have not yet been closed. If these objects are unlinked then relinked, they will not be destroyed. If they are opened twice (even by two different names), both IDs will "see" changes made to the object using the other ID. When an object is opened using two different names (e.g., if a dataset was opened under one name, then mounted and opened under its new name), calling H5Iget_name() on a given hid_t will return the name used to open that hid_t, not the current name of the object (this is a feature, and a change from the previous behavior of datasets). Solution: Used H5FO code that was already in place for datasets. Broke H5D_t's, H5T_t's, and H5G_t's into a "shared" struct and a private struct. The shared structs (H5D_shared_t, etc.) hold the object's information and are used by all IDs that point to a given object in the file. The private structs are pointed to by the hid_t and contain the object's group entry information (including its name) and a pointer to the shared struct for that object. This changed the naming of structs throughout the library (e.g., datatype->size is now datatype->shared->size). I added an updated H5Tinit.c to windows.zip. Platforms tested: Visual Studio 7, sleipnir, arabica, verbena Misc. update:
2004-09-29 03:04:19 +08:00
H5D_t *dset; /* Pointer to dataset to open */
H5T_t *type; /* Pointer to datatype to open */
[svn-r1144] Added support for object references to groups.
1999-03-18 08:07:50 +08:00
H5G_t *group; /* Pointer to group to open */
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
H5G_entry_t ent; /* Symbol table entry */
[svn-r925] Changes since 19981116 ---------------------- ./INSTALL.parallel [NEW] We're beginning to unify some of the parallel installation steps. This file will contain general information for installing the parallel library. It's not complete yet. ./configure.in ./configure [REGENERATED] ./src/H5config.h.in [REGENERATED] Check for xdr_int() in libnsl required on Solaris when linking with hdf4. It's found on the Irix system I tested which complains that `-lnsl' didn't resolve any symbols. Oh well. Fixed the order of searching for libdf and libmfhdf for hdf4 linking. ./configure.in ./configure [REGENERATED] ./src/H5config.h.in [REGENERATED] ./src/H5Z.c Check for compress() in libz in order to find older versions of the library that will still work for hdf4. Added a separate check for compress2() that hdf5 will use. ./configure.in ./configure [REGENERATED] ./src/H5config.h.in [REGENERATED] ./src/H5.c ./src/H5private.h ./src/H5A.c ./src/H5B.c ./src/H5Bprivate.h ./src/H5D.c ./src/H5F.c ./src/H5Farray.c ./src/H5Fcore.c ./src/H5Ffamily.c ./src/H5Fistore.c ./src/H5Flow.c ./src/H5Fmpio.c ./src/H5Fprivate.h ./src/H5Fsec2.c ./src/H5Fsplit.c ./src/H5Fstdio.c ./src/H5Gent.c ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5HG.c ./src/H5HL.c ./src/H5O.c ./src/H5Oattr.c ./src/H5Ocomp.c ./src/H5Ocont.c ./src/H5Odtype.c ./src/H5Oefl.c ./src/H5Ofill.c ./src/H5Olayout.c ./src/H5Omtime.c ./src/H5Oname.c ./src/H5Oprivate.h ./src/H5Osdspace.c ./src/H5Oshared.c ./src/H5Ostab.c ./src/H5R.c ./src/H5RA.c ./src/H5Sall.c ./src/H5Shyper.c ./src/H5Snone.c ./src/H5Spoint.c ./src/H5Sprivate.h ./src/H5Sselect.c ./src/H5T.c ./src/H5Tbit.c ./src/H5Tconv.c ./src/H5Tpkg.h ./src/H5V.c ./test/bittests.c ./test/gheap.c ./test/hyperslab.c ./test/istore.c ./test/tmeta.c ./test/trefer.c ./test/tselect.c ./tools/h5debug.c ./tools/h5tols.c Added checks for Posix.1g types like `int8_t'. If not defined then H5private.h defines them. Changed all `int8' etc. to `int8_t'. ./src/H5A.c ./src/H5D.c ./src/H5F.c ./src/H5G.c ./src/H5I.c ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5T.c ./src/H5TB.c ./src/H5Z.c Calling H5*_term_interface() resets interface_initialize_g to FALSE so a subsequent call to H5open() (implied or explicit) reinitializes global variables properly. ./src/H5private.h ./src/H5Oefl.c ./src/H5S.c Changed MAX_SIZET, MAX_SSIZET, MAX_HSIZET, and MAX_HSSIZET to SIZET_MAX, SSIZET_MAX, HSIZET_MAX, and HSSIZE_MAX to they match the Posix.1 constants in <limits.h>. ./src/H5T.c ./src/H5Tconv.c ./src/H5Tpkg.h ./src/H5Tprivate.h ./src/H5detect.c Added 36 more integer hardware conversion functions to the type conversion table for conversions to/from `long long' and `unsigned long long'. The `long long' names will be changed shortly to make them portable to Win32. Changed H5T_init() to H5T_native_open() and added an H5T_native_close() to open and close the predefined native data types. Increased the initial size of the type conversion table from 64 to 128 entries. Reordered the 90 new integer conversion functions so the names that are printed favor `int' over `short' or `long' when two of them are the same. ./test/dtypes.c Added hardware and software integer conversion tests for the 56 functions I added recently but not the additional 36 checked in this time. That will come next. Call H5close() after each test so type conversion statistics are easier to follow. Try this: $ HDF5_DEBUG=t ./dtypes Added more debugging output for when things go wrong. ./src/H5private.h Removed trailing carriage-returns inserted by broken operating system ;-)
1998-11-19 02:40:09 +08:00
uint8_t *p; /* Pointer to OID to store */
[svn-r6784] Purpose: Bug fix Description: Corrected a couple of problems with Ray's v1.4 compat checkin yesterday. Platforms tested: FreeBSD 4.8 (sleipnir) w/ & w/o --enable_hdf5v1_4 compat switch Triple check unnecessary.
2003-04-30 21:55:51 +08:00
int oid_type; /* type of object being dereferenced */
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
hid_t ret_value;
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
[svn-r7917] Purpose: Code cleanup Description: Clean up compiler warnings, especially the 'FUNC' variable not used which comes out in production mode. Solution: Had to add a new FUNC_ENTER_NOAPI_NOINIT_NOFUNC macro for those non-API functions which don't need the 'FUNC' variable defined. (This will be _so_ much easier when C99 is standard on all our supposed platforms, since it has a __FUNC__ macro... ) Platforms tested: FreeBSD 4.9 (sleipnir) too minor for h5committest (although there were lots of files changed, the change was minor in each one)
2003-12-07 04:38:31 +08:00
FUNC_ENTER_NOAPI_NOINIT(H5R_dereference);
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
assert(_ref);
assert(ref_type>H5R_BADTYPE || ref_type<H5R_MAXTYPE);
[svn-r1385] Updated H5Rdereference, H5Rget_object_type and H5Rget_region to accept a location ID (i.e. a file or group ID) as well as the dataset ID. This should allow Dave to get the palettes stored in the file correctly and also enable Bob and/or Bruce's indexing stuff. This change should be folded into the documentation for these three functions for the release. Also, I fixed a number of bugs in the hyperslab and point selection iterators for H5Diterate and they are working correctly now.
1999-06-26 03:36:54 +08:00
assert(file);
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
/* Initialize the symbol table entry */
HDmemset(&ent,0,sizeof(H5G_entry_t));
ent.type=H5G_NOTHING_CACHED;
[svn-r1385] Updated H5Rdereference, H5Rget_object_type and H5Rget_region to accept a location ID (i.e. a file or group ID) as well as the dataset ID. This should allow Dave to get the palettes stored in the file correctly and also enable Bob and/or Bruce's indexing stuff. This change should be folded into the documentation for these three functions for the release. Also, I fixed a number of bugs in the hyperslab and point selection iterators for H5Diterate and they are working correctly now.
1999-06-26 03:36:54 +08:00
ent.file=file;
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
switch(ref_type) {
case H5R_OBJECT:
{
hobj_ref_t *ref=(hobj_ref_t *)_ref; /* Only object references currently supported */
[svn-r7334] Purpose: Bug fix Description: Object references were not getting written out correctly to the file, with recent changes to their memory structure. Solution: Convert the object references correctly. Platforms tested: h5committested
2003-08-11 20:43:04 +08:00
ent.header=*ref;
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
} /* end case */
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
break;
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
case H5R_DATASET_REGION:
{
hdset_reg_ref_t *ref=(hdset_reg_ref_t *)_ref; /* Get pointer to correct type of reference struct */
H5HG_t hobjid; /* Heap object ID */
uint8_t *buf; /* Buffer to store serialized selection in */
/* Get the heap ID for the dataset region */
[svn-r9250] Purpose: Bug fix Description: Correct typedef for dataset region references to avoid struct alignment issues on Crays. Solution: Change the typedef for hdset_reg_ref_t from a struct to an array of unsigned char's of the correct size and propagate the appropriate adjustments around the code. Platforms tested: FreeBSD 4.10 (sleipnir) Linux 2.4 (verbena) w/fortran Cray T90 (subzero) w/fortran Cray SV1 (wind) w/fortran & parallel Cray T3E (cyclone) w/fortran & parallel
2004-09-14 13:04:25 +08:00
p=(uint8_t *)ref;
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
H5F_addr_decode(ent.file,(const uint8_t **)&p,&(hobjid.addr));
INT32DECODE(p,hobjid.idx);
/* Get the dataset region from the heap (allocate inside routine) */
[svn-r6387] Purpose: Bug Fix Description: Metadata cache in parallel I/O can cause hangs in applications which perform independent I/O on chunked datasets, because the metadata cache can attempt to flush out dirty metadata from only a single process, instead of collectively from all processes. Solution: Pass a dataset transfer property list down from every API function which could possibly trigger metadata I/O. Then, split the metadata cache into two sets of entries to allow dirty metadata to be set aside when a hash table collision occurs during independent I/O. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} FreeBSD 4.7 (sleipnir) serial & parallel Misc. update: Updated release_docs/RELEASE
2003-02-11 01:26:09 +08:00
if((buf=H5HG_read(ent.file,dxpl_id,&hobjid,NULL))==NULL)
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR(H5E_REFERENCE, H5E_READERROR, FAIL, "Unable to read dataset region information");
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
/* Get the object oid for the dataset */
p=(uint8_t *)buf;
H5F_addr_decode(ent.file,(const uint8_t **)&p,&(ent.header));
/* Free the buffer allocated in H5HG_read() */
H5MM_xfree(buf);
} /* end case */
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
break;
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
case H5R_INTERNAL:
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR(H5E_REFERENCE, H5E_UNSUPPORTED, FAIL, "Internal references are not yet supported");
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
case H5R_BADTYPE:
case H5R_MAXTYPE:
default:
assert("unknown reference type" && 0);
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR(H5E_REFERENCE, H5E_UNSUPPORTED, FAIL, "internal error (unknown reference type)");
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
} /* end switch */
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
[svn-r2689] Purpose: Bug fix. Description: Previously, it has been possible to dereference deleted objects in a file. Obviously, this is incorrect and could cause all sorts of problems if the object being dereferenced had been partially over-written with other information. - This is documented in Bug #493. Solution: Check the link count for objects being dereferenced and don't allow any objects with link counts of zero to be dereferenced. This fixes bug #493. Platforms tested: FreeBSD 4.1.1 (hawkwind)
2000-10-18 04:46:57 +08:00
/* Check to make certain that this object hasn't been deleted since the reference was created */
[svn-r6387] Purpose: Bug Fix Description: Metadata cache in parallel I/O can cause hangs in applications which perform independent I/O on chunked datasets, because the metadata cache can attempt to flush out dirty metadata from only a single process, instead of collectively from all processes. Solution: Pass a dataset transfer property list down from every API function which could possibly trigger metadata I/O. Then, split the metadata cache into two sets of entries to allow dirty metadata to be set aside when a hash table collision occurs during independent I/O. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} FreeBSD 4.7 (sleipnir) serial & parallel Misc. update: Updated release_docs/RELEASE
2003-02-11 01:26:09 +08:00
if(H5O_link(&ent,0,dxpl_id)<=0)
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR(H5E_REFERENCE, H5E_LINKCOUNT, FAIL, "dereferencing deleted object");
[svn-r2689] Purpose: Bug fix. Description: Previously, it has been possible to dereference deleted objects in a file. Obviously, this is incorrect and could cause all sorts of problems if the object being dereferenced had been partially over-written with other information. - This is documented in Bug #493. Solution: Check the link count for objects being dereferenced and don't allow any objects with link counts of zero to be dereferenced. This fixes bug #493. Platforms tested: FreeBSD 4.1.1 (hawkwind)
2000-10-18 04:46:57 +08:00
[svn-r9329] Purpose: Feature Description: Datatypes and groups now use H5FO "file object" code that was previously only used by datasets. These objects will hold a file open if the file is closed but they have not yet been closed. If these objects are unlinked then relinked, they will not be destroyed. If they are opened twice (even by two different names), both IDs will "see" changes made to the object using the other ID. When an object is opened using two different names (e.g., if a dataset was opened under one name, then mounted and opened under its new name), calling H5Iget_name() on a given hid_t will return the name used to open that hid_t, not the current name of the object (this is a feature, and a change from the previous behavior of datasets). Solution: Used H5FO code that was already in place for datasets. Broke H5D_t's, H5T_t's, and H5G_t's into a "shared" struct and a private struct. The shared structs (H5D_shared_t, etc.) hold the object's information and are used by all IDs that point to a given object in the file. The private structs are pointed to by the hid_t and contain the object's group entry information (including its name) and a pointer to the shared struct for that object. This changed the naming of structs throughout the library (e.g., datatype->size is now datatype->shared->size). I added an updated H5Tinit.c to windows.zip. Platforms tested: Visual Studio 7, sleipnir, arabica, verbena Misc. update:
2004-09-29 03:04:19 +08:00
/* Open the object */
[svn-r6387] Purpose: Bug Fix Description: Metadata cache in parallel I/O can cause hangs in applications which perform independent I/O on chunked datasets, because the metadata cache can attempt to flush out dirty metadata from only a single process, instead of collectively from all processes. Solution: Pass a dataset transfer property list down from every API function which could possibly trigger metadata I/O. Then, split the metadata cache into two sets of entries to allow dirty metadata to be set aside when a hash table collision occurs during independent I/O. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} FreeBSD 4.7 (sleipnir) serial & parallel Misc. update: Updated release_docs/RELEASE
2003-02-11 01:26:09 +08:00
oid_type=H5G_get_type(&ent,dxpl_id);
[svn-r1135] Expanded API for reading lists blocks/points to allow for just a portion of the block/point-list to be read at a time.
1999-03-12 05:03:30 +08:00
switch(oid_type) {
case H5G_GROUP:
[svn-r9329] Purpose: Feature Description: Datatypes and groups now use H5FO "file object" code that was previously only used by datasets. These objects will hold a file open if the file is closed but they have not yet been closed. If these objects are unlinked then relinked, they will not be destroyed. If they are opened twice (even by two different names), both IDs will "see" changes made to the object using the other ID. When an object is opened using two different names (e.g., if a dataset was opened under one name, then mounted and opened under its new name), calling H5Iget_name() on a given hid_t will return the name used to open that hid_t, not the current name of the object (this is a feature, and a change from the previous behavior of datasets). Solution: Used H5FO code that was already in place for datasets. Broke H5D_t's, H5T_t's, and H5G_t's into a "shared" struct and a private struct. The shared structs (H5D_shared_t, etc.) hold the object's information and are used by all IDs that point to a given object in the file. The private structs are pointed to by the hid_t and contain the object's group entry information (including its name) and a pointer to the shared struct for that object. This changed the naming of structs throughout the library (e.g., datatype->size is now datatype->shared->size). I added an updated H5Tinit.c to windows.zip. Platforms tested: Visual Studio 7, sleipnir, arabica, verbena Misc. update:
2004-09-29 03:04:19 +08:00
if ((group=H5G_open(&ent,dxpl_id)) == NULL)
[svn-r1144] Added support for object references to groups.
1999-03-18 08:07:50 +08:00
HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "not found");
[svn-r9329] Purpose: Feature Description: Datatypes and groups now use H5FO "file object" code that was previously only used by datasets. These objects will hold a file open if the file is closed but they have not yet been closed. If these objects are unlinked then relinked, they will not be destroyed. If they are opened twice (even by two different names), both IDs will "see" changes made to the object using the other ID. When an object is opened using two different names (e.g., if a dataset was opened under one name, then mounted and opened under its new name), calling H5Iget_name() on a given hid_t will return the name used to open that hid_t, not the current name of the object (this is a feature, and a change from the previous behavior of datasets). Solution: Used H5FO code that was already in place for datasets. Broke H5D_t's, H5T_t's, and H5G_t's into a "shared" struct and a private struct. The shared structs (H5D_shared_t, etc.) hold the object's information and are used by all IDs that point to a given object in the file. The private structs are pointed to by the hid_t and contain the object's group entry information (including its name) and a pointer to the shared struct for that object. This changed the naming of structs throughout the library (e.g., datatype->size is now datatype->shared->size). I added an updated H5Tinit.c to windows.zip. Platforms tested: Visual Studio 7, sleipnir, arabica, verbena Misc. update:
2004-09-29 03:04:19 +08:00
/* Create an atom for the group */
[svn-r1144] Added support for object references to groups.
1999-03-18 08:07:50 +08:00
if ((ret_value = H5I_register(H5I_GROUP, group)) < 0) {
H5G_close(group);
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR(H5E_SYM, H5E_CANTREGISTER, FAIL, "can't register group");
[svn-r1144] Added support for object references to groups.
1999-03-18 08:07:50 +08:00
}
[svn-r1135] Expanded API for reading lists blocks/points to allow for just a portion of the block/point-list to be read at a time.
1999-03-12 05:03:30 +08:00
break;
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
[svn-r1135] Expanded API for reading lists blocks/points to allow for just a portion of the block/point-list to be read at a time.
1999-03-12 05:03:30 +08:00
case H5G_TYPE:
[svn-r9329] Purpose: Feature Description: Datatypes and groups now use H5FO "file object" code that was previously only used by datasets. These objects will hold a file open if the file is closed but they have not yet been closed. If these objects are unlinked then relinked, they will not be destroyed. If they are opened twice (even by two different names), both IDs will "see" changes made to the object using the other ID. When an object is opened using two different names (e.g., if a dataset was opened under one name, then mounted and opened under its new name), calling H5Iget_name() on a given hid_t will return the name used to open that hid_t, not the current name of the object (this is a feature, and a change from the previous behavior of datasets). Solution: Used H5FO code that was already in place for datasets. Broke H5D_t's, H5T_t's, and H5G_t's into a "shared" struct and a private struct. The shared structs (H5D_shared_t, etc.) hold the object's information and are used by all IDs that point to a given object in the file. The private structs are pointed to by the hid_t and contain the object's group entry information (including its name) and a pointer to the shared struct for that object. This changed the naming of structs throughout the library (e.g., datatype->size is now datatype->shared->size). I added an updated H5Tinit.c to windows.zip. Platforms tested: Visual Studio 7, sleipnir, arabica, verbena Misc. update:
2004-09-29 03:04:19 +08:00
if ((type=H5T_open(&ent, dxpl_id)) == NULL)
[svn-r1146] Added support for object references to named datatypes.
1999-03-18 09:30:03 +08:00
HGOTO_ERROR(H5E_DATATYPE, H5E_NOTFOUND, FAIL, "not found");
[svn-r9329] Purpose: Feature Description: Datatypes and groups now use H5FO "file object" code that was previously only used by datasets. These objects will hold a file open if the file is closed but they have not yet been closed. If these objects are unlinked then relinked, they will not be destroyed. If they are opened twice (even by two different names), both IDs will "see" changes made to the object using the other ID. When an object is opened using two different names (e.g., if a dataset was opened under one name, then mounted and opened under its new name), calling H5Iget_name() on a given hid_t will return the name used to open that hid_t, not the current name of the object (this is a feature, and a change from the previous behavior of datasets). Solution: Used H5FO code that was already in place for datasets. Broke H5D_t's, H5T_t's, and H5G_t's into a "shared" struct and a private struct. The shared structs (H5D_shared_t, etc.) hold the object's information and are used by all IDs that point to a given object in the file. The private structs are pointed to by the hid_t and contain the object's group entry information (including its name) and a pointer to the shared struct for that object. This changed the naming of structs throughout the library (e.g., datatype->size is now datatype->shared->size). I added an updated H5Tinit.c to windows.zip. Platforms tested: Visual Studio 7, sleipnir, arabica, verbena Misc. update:
2004-09-29 03:04:19 +08:00
/* Create an atom for the datatype */
if ((ret_value = H5I_register(H5I_DATATYPE, type)) < 0) {
H5T_close(type);
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTREGISTER, FAIL, "can't register datatype");
[svn-r1146] Added support for object references to named datatypes.
1999-03-18 09:30:03 +08:00
}
[svn-r1135] Expanded API for reading lists blocks/points to allow for just a portion of the block/point-list to be read at a time.
1999-03-12 05:03:30 +08:00
break;
case H5G_DATASET:
[svn-r6252] Purpose: Lots of performance improvements & a couple new internal API interfaces. Description: Performance Improvements: - Cached file offset & length sizes in shared file struct, to avoid constantly looking them up in the FCPL. - Generic property improvements: - Added "revision" number to generic property classes to speed up comparisons. - Changed method of storing properties from using a hash-table to the TBBT routines in the library. - Share the propery names between classes and the lists derived from them. - Removed redundant 'def_value' buffer from each property. - Switching code to use a "copy on write" strategy for properties in each list, where the properties in each list are shared with the properties in the class, until a property's value is changed in a list. - Fixed error in layout code which was allocating too many buffers. - Redefined public macros of the form (H5open()/H5check, <variable>) internally to only be (<variable>), avoiding innumerable useless calls to H5open() and H5check_version(). - Reuse already zeroed buffers in H5F_contig_fill instead of constantly re-zeroing them. - Don't write fill values if writing entire dataset. - Use gettimeofday() system call instead of time() system when checking the modification time of a dataset. - Added reference counted string API and use it for tracking the names of objects opening in a file (for the ID->name code). - Removed redundant H5P_get() calls in B-tree routines. - Redefine H5T datatype macros internally to the library, to avoid calling H5check redundantly. - Keep dataspace information for dataset locally instead of reading from disk each time. Added new module to track open objects in a file, to allow this (which will be useful eventually for some FPH5 metadata caching issues). - Remove H5AC_find macro which was inlining metadata cache lookups, and call function instead. - Remove redundant memset() calls from H5G_namei() routine. - Remove redundant checking of object type when locating objects in metadata cache and rely on the address only. - Create default dataset object to use when default dataset creation property list is used to create datasets, bypassing querying for all the property list values. - Use default I/O vector size when performing raw data with the default dataset transfer property list, instead of querying for I/O vector size. - Remove H5P_DEFAULT internally to the library, replacing it with more specific default property list based on the type of property list needed. - Remove redundant memset() calls in object header message (H5O*) routines. - Remove redunant memset() calls in data I/O routines. - Split free-list allocation routines into malloc() and calloc()- like routines, instead of one combined routine. - Remove lots of indirection in H5O*() routines. - Simplify metadata cache entry comparison routine (used when flushing entire cache out). - Only enable metadata cache statistics when H5AC_DEBUG is turned on, instead of always tracking them. - Simplify address comparison macro (H5F_addr_eq). - Remove redundant metadata cache entry protections during dataset creation by protecting the object header once and making all the modifications necessary for the dataset creation before unprotecting it. - Reduce # of "number of element in extent" computations performed by computing and storing the value during dataspace creation. - Simplify checking for group location's file information, when file has not been involving in file-mounting operations. - Use binary encoding for modification time, instead of ASCII. - Hoist H5HL_peek calls (to get information in a local heap) out of loops in many group routine. - Use static variable for iterators of selections, instead of dynamically allocation them each time. - Lookup & insert new entries in one step, avoiding traversing group's B-tree twice. - Fixed memory leak in H5Gget_objname_idx() routine (tangential to performance improvements, but fixed along the way). - Use free-list for reference counted strings. - Don't bother copying object names into cached group entries, since they are re-created when an object is opened. The benchmark I used to measure these results created several thousand small (2K) datasets in a file and wrote out the data for them. This is Elena's "regular.c" benchmark. These changes resulted in approximately ~4.3x speedup of the development branch when compared to the previous code in the development branch and ~1.4x speedup compared to the release branch. Additionally, these changes reduce the total memory used (code and data) by the development branch by ~800KB, bringing the development branch back into the same ballpark as the release branch. I'll send out a more detailed description of the benchmark results as a followup note. New internal API routines: Added "reference counted strings" API for tracking strings that get used by multiple owners without duplicating the strings. Added "ternary search tree" API for text->object mappings. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} Other platforms/configurations tested? FreeBSD 4.7 (sleipnir) serial & parallel Solaris 2.6 (baldric) serial
2003-01-10 01:20:03 +08:00
/* Open the dataset */
[svn-r9333] Purpose: Bug fix Description: Fix another couple of int <-> pointer checks. Platforms tested: AIX 5.1 (copper) Too minor to require h5committest
2004-09-29 03:54:12 +08:00
if ((dset=H5D_open(&ent,dxpl_id))==NULL)
[svn-r1135] Expanded API for reading lists blocks/points to allow for just a portion of the block/point-list to be read at a time.
1999-03-12 05:03:30 +08:00
HGOTO_ERROR(H5E_DATASET, H5E_NOTFOUND, FAIL, "not found");
[svn-r9329] Purpose: Feature Description: Datatypes and groups now use H5FO "file object" code that was previously only used by datasets. These objects will hold a file open if the file is closed but they have not yet been closed. If these objects are unlinked then relinked, they will not be destroyed. If they are opened twice (even by two different names), both IDs will "see" changes made to the object using the other ID. When an object is opened using two different names (e.g., if a dataset was opened under one name, then mounted and opened under its new name), calling H5Iget_name() on a given hid_t will return the name used to open that hid_t, not the current name of the object (this is a feature, and a change from the previous behavior of datasets). Solution: Used H5FO code that was already in place for datasets. Broke H5D_t's, H5T_t's, and H5G_t's into a "shared" struct and a private struct. The shared structs (H5D_shared_t, etc.) hold the object's information and are used by all IDs that point to a given object in the file. The private structs are pointed to by the hid_t and contain the object's group entry information (including its name) and a pointer to the shared struct for that object. This changed the naming of structs throughout the library (e.g., datatype->size is now datatype->shared->size). I added an updated H5Tinit.c to windows.zip. Platforms tested: Visual Studio 7, sleipnir, arabica, verbena Misc. update:
2004-09-29 03:04:19 +08:00
/* Create an atom for the dataset */
if ((ret_value = H5I_register(H5I_DATASET, dset)) < 0) {
H5D_close(dset);
HGOTO_ERROR(H5E_DATASET, H5E_CANTREGISTER, FAIL, "can't register dataset");
}
[svn-r1135] Expanded API for reading lists blocks/points to allow for just a portion of the block/point-list to be read at a time.
1999-03-12 05:03:30 +08:00
break;
default:
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR(H5E_REFERENCE, H5E_BADTYPE, FAIL, "can't identify type of object referenced");
[svn-r1135] Expanded API for reading lists blocks/points to allow for just a portion of the block/point-list to be read at a time.
1999-03-12 05:03:30 +08:00
} /* end switch */
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
done:
[svn-r6266] Purpose: Code cleanup/new feature. Description: Split FUNC_LEAVE into API and non-API specific versions. This allows a solution to compiling this branch with C++, as well as reducing the size of the binaries produced. Platforms tested: FreeBSD 4.7 (sleipnir) w/serial, parallel (including MPE) & thread-safe
2003-01-11 04:26:02 +08:00
FUNC_LEAVE_NOAPI(ret_value);
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
} /* end H5R_dereference() */
/*--------------------------------------------------------------------------
NAME
H5Rdereference
PURPOSE
Opens the HDF5 object referenced.
USAGE
hid_t H5Rdereference(ref)
[svn-r1385] Updated H5Rdereference, H5Rget_object_type and H5Rget_region to accept a location ID (i.e. a file or group ID) as well as the dataset ID. This should allow Dave to get the palettes stored in the file correctly and also enable Bob and/or Bruce's indexing stuff. This change should be folded into the documentation for these three functions for the release. Also, I fixed a number of bugs in the hyperslab and point selection iterators for H5Diterate and they are working correctly now.
1999-06-26 03:36:54 +08:00
hid_t id; IN: Dataset reference object is in or location ID of
object that the dataset is located within.
[svn-r776] Fixed references, object references should be working now.
1998-10-23 06:49:16 +08:00
H5R_type_t ref_type; IN: Type of reference to create
[svn-r1385] Updated H5Rdereference, H5Rget_object_type and H5Rget_region to accept a location ID (i.e. a file or group ID) as well as the dataset ID. This should allow Dave to get the palettes stored in the file correctly and also enable Bob and/or Bruce's indexing stuff. This change should be folded into the documentation for these three functions for the release. Also, I fixed a number of bugs in the hyperslab and point selection iterators for H5Diterate and they are working correctly now.
1999-06-26 03:36:54 +08:00
void *ref; IN: Reference to open.
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
RETURNS
[svn-r797] Changed comments from returning "SUCCEED/FAIL" to "non-negative/negative" and also fixed a few more explicit checks against FAIL.
1998-10-27 05:18:54 +08:00
Valid ID on success, Negative on failure
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
DESCRIPTION
Given a reference to some object, open that object and return an ID for
that object.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
hid_t
[svn-r1385] Updated H5Rdereference, H5Rget_object_type and H5Rget_region to accept a location ID (i.e. a file or group ID) as well as the dataset ID. This should allow Dave to get the palettes stored in the file correctly and also enable Bob and/or Bruce's indexing stuff. This change should be folded into the documentation for these three functions for the release. Also, I fixed a number of bugs in the hyperslab and point selection iterators for H5Diterate and they are working correctly now.
1999-06-26 03:36:54 +08:00
H5Rdereference(hid_t id, H5R_type_t ref_type, void *_ref)
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
{
[svn-r1385] Updated H5Rdereference, H5Rget_object_type and H5Rget_region to accept a location ID (i.e. a file or group ID) as well as the dataset ID. This should allow Dave to get the palettes stored in the file correctly and also enable Bob and/or Bruce's indexing stuff. This change should be folded into the documentation for these three functions for the release. Also, I fixed a number of bugs in the hyperslab and point selection iterators for H5Diterate and they are working correctly now.
1999-06-26 03:36:54 +08:00
H5G_entry_t *loc = NULL; /* Symbol table entry */
H5F_t *file=NULL; /* File object */
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
hid_t ret_value;
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
[svn-r5471] Purpose: Code cleanup Description: Broke the FUNC_ENTER macro into several macros, with more specialized uses (which followup mail will describe). This was designed to move most/all of the checks which could be done at compile time to that point, instead of needlessly performing them (over & over :-) at run-time. This reduces the library's size (and thus staticly linked binaries) and has a minor speedup effect also. Platforms tested: IRIX64 6.5 (modi4) with parallel & FORTRAN enabled, and additional testing on FreeBSD and Solaris immediately after the checkin.
2002-05-29 23:07:55 +08:00
FUNC_ENTER_API(H5Rdereference, FAIL);
[svn-r1385] Updated H5Rdereference, H5Rget_object_type and H5Rget_region to accept a location ID (i.e. a file or group ID) as well as the dataset ID. This should allow Dave to get the palettes stored in the file correctly and also enable Bob and/or Bruce's indexing stuff. This change should be folded into the documentation for these three functions for the release. Also, I fixed a number of bugs in the hyperslab and point selection iterators for H5Diterate and they are working correctly now.
1999-06-26 03:36:54 +08:00
H5TRACE3("i","iRtx",id,ref_type,_ref);
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
/* Check args */
[svn-r3065] Purpose: Code cleanup Description: Remove some warnings... Platforms tested: FreeBSD 4.2 (hawkwind) & IRIX64 6.5 (modi4)
2000-12-02 23:11:57 +08:00
if (NULL == (loc = H5G_loc(id)))
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location");
[svn-r776] Fixed references, object references should be working now.
1998-10-23 06:49:16 +08:00
if(ref_type<=H5R_BADTYPE || ref_type>=H5R_MAXTYPE)
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR (H5E_ARGS, H5E_BADVALUE, FAIL, "invalid reference type");
[svn-r776] Fixed references, object references should be working now.
1998-10-23 06:49:16 +08:00
if(_ref==NULL)
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR (H5E_ARGS, H5E_BADVALUE, FAIL, "invalid reference pointer");
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
[svn-r3065] Purpose: Code cleanup Description: Remove some warnings... Platforms tested: FreeBSD 4.2 (hawkwind) & IRIX64 6.5 (modi4)
2000-12-02 23:11:57 +08:00
/* Get the file pointer from the entry */
file=loc->file;
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
/* Create reference */
[svn-r6387] Purpose: Bug Fix Description: Metadata cache in parallel I/O can cause hangs in applications which perform independent I/O on chunked datasets, because the metadata cache can attempt to flush out dirty metadata from only a single process, instead of collectively from all processes. Solution: Pass a dataset transfer property list down from every API function which could possibly trigger metadata I/O. Then, split the metadata cache into two sets of entries to allow dirty metadata to be set aside when a hash table collision occurs during independent I/O. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} FreeBSD 4.7 (sleipnir) serial & parallel Misc. update: Updated release_docs/RELEASE
2003-02-11 01:26:09 +08:00
if ((ret_value=H5R_dereference(file, H5AC_dxpl_id, ref_type, _ref))<0)
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
HGOTO_ERROR (H5E_REFERENCE, H5E_CANTINIT, FAIL, "unable dereference object");
done:
[svn-r6266] Purpose: Code cleanup/new feature. Description: Split FUNC_LEAVE into API and non-API specific versions. This allows a solution to compiling this branch with C++, as well as reducing the size of the binaries produced. Platforms tested: FreeBSD 4.7 (sleipnir) w/serial, parallel (including MPE) & thread-safe
2003-01-11 04:26:02 +08:00
FUNC_LEAVE_API(ret_value);
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
} /* end H5Rdereference() */
/*--------------------------------------------------------------------------
NAME
[svn-r790] Updated parameters for H5R API and changed constants from pointers to references
1998-10-27 01:14:00 +08:00
H5R_get_region
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
PURPOSE
Retrieves a dataspace with the region pointed to selected.
USAGE
[svn-r1385] Updated H5Rdereference, H5Rget_object_type and H5Rget_region to accept a location ID (i.e. a file or group ID) as well as the dataset ID. This should allow Dave to get the palettes stored in the file correctly and also enable Bob and/or Bruce's indexing stuff. This change should be folded into the documentation for these three functions for the release. Also, I fixed a number of bugs in the hyperslab and point selection iterators for H5Diterate and they are working correctly now.
1999-06-26 03:36:54 +08:00
H5S_t *H5R_get_region(file, ref_type, ref)
H5F_t *file; IN: File the object being dereferenced is within
H5R_type_t ref_type; UNUSED
void *ref; IN: Reference to open.
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
RETURNS
Pointer to the dataspace on success, NULL on failure
DESCRIPTION
Given a reference to some object, creates a copy of the dataset pointed
to's dataspace and defines a selection in the copy which is the region
pointed to.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
static H5S_t *
[svn-r6387] Purpose: Bug Fix Description: Metadata cache in parallel I/O can cause hangs in applications which perform independent I/O on chunked datasets, because the metadata cache can attempt to flush out dirty metadata from only a single process, instead of collectively from all processes. Solution: Pass a dataset transfer property list down from every API function which could possibly trigger metadata I/O. Then, split the metadata cache into two sets of entries to allow dirty metadata to be set aside when a hash table collision occurs during independent I/O. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} FreeBSD 4.7 (sleipnir) serial & parallel Misc. update: Updated release_docs/RELEASE
2003-02-11 01:26:09 +08:00
H5R_get_region(H5F_t *file, hid_t dxpl_id, H5R_type_t UNUSED ref_type, void *_ref)
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
{
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
H5G_entry_t ent; /* Symbol table entry */
uint8_t *p; /* Pointer to OID to store */
hdset_reg_ref_t *ref=(hdset_reg_ref_t *)_ref; /* Get pointer to correct type of reference struct */
H5HG_t hobjid; /* Heap object ID */
uint8_t *buf; /* Buffer to store serialized selection in */
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
H5S_t *ret_value;
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
[svn-r7917] Purpose: Code cleanup Description: Clean up compiler warnings, especially the 'FUNC' variable not used which comes out in production mode. Solution: Had to add a new FUNC_ENTER_NOAPI_NOINIT_NOFUNC macro for those non-API functions which don't need the 'FUNC' variable defined. (This will be _so_ much easier when C99 is standard on all our supposed platforms, since it has a __FUNC__ macro... ) Platforms tested: FreeBSD 4.9 (sleipnir) too minor for h5committest (although there were lots of files changed, the change was minor in each one)
2003-12-07 04:38:31 +08:00
FUNC_ENTER_NOAPI_NOINIT(H5R_get_region);
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
assert(_ref);
assert(ref_type==H5R_DATASET_REGION);
[svn-r1385] Updated H5Rdereference, H5Rget_object_type and H5Rget_region to accept a location ID (i.e. a file or group ID) as well as the dataset ID. This should allow Dave to get the palettes stored in the file correctly and also enable Bob and/or Bruce's indexing stuff. This change should be folded into the documentation for these three functions for the release. Also, I fixed a number of bugs in the hyperslab and point selection iterators for H5Diterate and they are working correctly now.
1999-06-26 03:36:54 +08:00
assert(file);
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
/* Initialize the symbol table entry */
HDmemset(&ent,0,sizeof(H5G_entry_t));
ent.type=H5G_NOTHING_CACHED;
[svn-r1385] Updated H5Rdereference, H5Rget_object_type and H5Rget_region to accept a location ID (i.e. a file or group ID) as well as the dataset ID. This should allow Dave to get the palettes stored in the file correctly and also enable Bob and/or Bruce's indexing stuff. This change should be folded into the documentation for these three functions for the release. Also, I fixed a number of bugs in the hyperslab and point selection iterators for H5Diterate and they are working correctly now.
1999-06-26 03:36:54 +08:00
ent.file=file;
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
/* Get the heap ID for the dataset region */
[svn-r9250] Purpose: Bug fix Description: Correct typedef for dataset region references to avoid struct alignment issues on Crays. Solution: Change the typedef for hdset_reg_ref_t from a struct to an array of unsigned char's of the correct size and propagate the appropriate adjustments around the code. Platforms tested: FreeBSD 4.10 (sleipnir) Linux 2.4 (verbena) w/fortran Cray T90 (subzero) w/fortran Cray SV1 (wind) w/fortran & parallel Cray T3E (cyclone) w/fortran & parallel
2004-09-14 13:04:25 +08:00
p=(uint8_t *)ref;
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
H5F_addr_decode(ent.file,(const uint8_t **)&p,&(hobjid.addr));
INT32DECODE(p,hobjid.idx);
/* Get the dataset region from the heap (allocate inside routine) */
[svn-r6387] Purpose: Bug Fix Description: Metadata cache in parallel I/O can cause hangs in applications which perform independent I/O on chunked datasets, because the metadata cache can attempt to flush out dirty metadata from only a single process, instead of collectively from all processes. Solution: Pass a dataset transfer property list down from every API function which could possibly trigger metadata I/O. Then, split the metadata cache into two sets of entries to allow dirty metadata to be set aside when a hash table collision occurs during independent I/O. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} FreeBSD 4.7 (sleipnir) serial & parallel Misc. update: Updated release_docs/RELEASE
2003-02-11 01:26:09 +08:00
if((buf=H5HG_read(ent.file,dxpl_id,&hobjid,NULL))==NULL)
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR(H5E_REFERENCE, H5E_READERROR, NULL, "Unable to read dataset region information");
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
/* Get the object oid for the dataset */
p=(uint8_t *)buf;
H5F_addr_decode(ent.file,(const uint8_t **)&p,&(ent.header));
[svn-r6252] Purpose: Lots of performance improvements & a couple new internal API interfaces. Description: Performance Improvements: - Cached file offset & length sizes in shared file struct, to avoid constantly looking them up in the FCPL. - Generic property improvements: - Added "revision" number to generic property classes to speed up comparisons. - Changed method of storing properties from using a hash-table to the TBBT routines in the library. - Share the propery names between classes and the lists derived from them. - Removed redundant 'def_value' buffer from each property. - Switching code to use a "copy on write" strategy for properties in each list, where the properties in each list are shared with the properties in the class, until a property's value is changed in a list. - Fixed error in layout code which was allocating too many buffers. - Redefined public macros of the form (H5open()/H5check, <variable>) internally to only be (<variable>), avoiding innumerable useless calls to H5open() and H5check_version(). - Reuse already zeroed buffers in H5F_contig_fill instead of constantly re-zeroing them. - Don't write fill values if writing entire dataset. - Use gettimeofday() system call instead of time() system when checking the modification time of a dataset. - Added reference counted string API and use it for tracking the names of objects opening in a file (for the ID->name code). - Removed redundant H5P_get() calls in B-tree routines. - Redefine H5T datatype macros internally to the library, to avoid calling H5check redundantly. - Keep dataspace information for dataset locally instead of reading from disk each time. Added new module to track open objects in a file, to allow this (which will be useful eventually for some FPH5 metadata caching issues). - Remove H5AC_find macro which was inlining metadata cache lookups, and call function instead. - Remove redundant memset() calls from H5G_namei() routine. - Remove redundant checking of object type when locating objects in metadata cache and rely on the address only. - Create default dataset object to use when default dataset creation property list is used to create datasets, bypassing querying for all the property list values. - Use default I/O vector size when performing raw data with the default dataset transfer property list, instead of querying for I/O vector size. - Remove H5P_DEFAULT internally to the library, replacing it with more specific default property list based on the type of property list needed. - Remove redundant memset() calls in object header message (H5O*) routines. - Remove redunant memset() calls in data I/O routines. - Split free-list allocation routines into malloc() and calloc()- like routines, instead of one combined routine. - Remove lots of indirection in H5O*() routines. - Simplify metadata cache entry comparison routine (used when flushing entire cache out). - Only enable metadata cache statistics when H5AC_DEBUG is turned on, instead of always tracking them. - Simplify address comparison macro (H5F_addr_eq). - Remove redundant metadata cache entry protections during dataset creation by protecting the object header once and making all the modifications necessary for the dataset creation before unprotecting it. - Reduce # of "number of element in extent" computations performed by computing and storing the value during dataspace creation. - Simplify checking for group location's file information, when file has not been involving in file-mounting operations. - Use binary encoding for modification time, instead of ASCII. - Hoist H5HL_peek calls (to get information in a local heap) out of loops in many group routine. - Use static variable for iterators of selections, instead of dynamically allocation them each time. - Lookup & insert new entries in one step, avoiding traversing group's B-tree twice. - Fixed memory leak in H5Gget_objname_idx() routine (tangential to performance improvements, but fixed along the way). - Use free-list for reference counted strings. - Don't bother copying object names into cached group entries, since they are re-created when an object is opened. The benchmark I used to measure these results created several thousand small (2K) datasets in a file and wrote out the data for them. This is Elena's "regular.c" benchmark. These changes resulted in approximately ~4.3x speedup of the development branch when compared to the previous code in the development branch and ~1.4x speedup compared to the release branch. Additionally, these changes reduce the total memory used (code and data) by the development branch by ~800KB, bringing the development branch back into the same ballpark as the release branch. I'll send out a more detailed description of the benchmark results as a followup note. New internal API routines: Added "reference counted strings" API for tracking strings that get used by multiple owners without duplicating the strings. Added "ternary search tree" API for text->object mappings. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} Other platforms/configurations tested? FreeBSD 4.7 (sleipnir) serial & parallel Solaris 2.6 (baldric) serial
2003-01-10 01:20:03 +08:00
/* Open and copy the dataset's dataspace */
[svn-r6387] Purpose: Bug Fix Description: Metadata cache in parallel I/O can cause hangs in applications which perform independent I/O on chunked datasets, because the metadata cache can attempt to flush out dirty metadata from only a single process, instead of collectively from all processes. Solution: Pass a dataset transfer property list down from every API function which could possibly trigger metadata I/O. Then, split the metadata cache into two sets of entries to allow dirty metadata to be set aside when a hash table collision occurs during independent I/O. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} FreeBSD 4.7 (sleipnir) serial & parallel Misc. update: Updated release_docs/RELEASE
2003-02-11 01:26:09 +08:00
if ((ret_value=H5S_read(&ent, dxpl_id)) == NULL)
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
HGOTO_ERROR(H5E_DATASPACE, H5E_NOTFOUND, NULL, "not found");
[svn-r1132] Dataset region references are now finished and working correctly. Also, there are five new API functions for querying selections: H5Sget_select_hyper_nblocks - retrieves the number of hyperslab blocks in current hyperslab selection for a dataspace H5Sget_select_elem_npoints - retrieves the number of element points in current element selection for a dataspace H5Sget_select_hyper_blocklist - retrieves a list of the hyperslab blocks in current hyperslab selection for a dataspace H5Sget_select_elem_pointlist - retrieves a list of the element points in current element selection for a dataspace H5Sget_select_bounds - retrieves a n-dimensional bounding box containing current selection.
1999-03-11 07:50:03 +08:00
/* Unserialize the selection */
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
if (H5S_select_deserialize(ret_value,p) < 0)
[svn-r1132] Dataset region references are now finished and working correctly. Also, there are five new API functions for querying selections: H5Sget_select_hyper_nblocks - retrieves the number of hyperslab blocks in current hyperslab selection for a dataspace H5Sget_select_elem_npoints - retrieves the number of element points in current element selection for a dataspace H5Sget_select_hyper_blocklist - retrieves a list of the hyperslab blocks in current hyperslab selection for a dataspace H5Sget_select_elem_pointlist - retrieves a list of the element points in current element selection for a dataspace H5Sget_select_bounds - retrieves a n-dimensional bounding box containing current selection.
1999-03-11 07:50:03 +08:00
HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDECODE, NULL, "can't deserialize selection");
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
/* Free the buffer allocated in H5HG_read() */
H5MM_xfree(buf);
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
done:
[svn-r6266] Purpose: Code cleanup/new feature. Description: Split FUNC_LEAVE into API and non-API specific versions. This allows a solution to compiling this branch with C++, as well as reducing the size of the binaries produced. Platforms tested: FreeBSD 4.7 (sleipnir) w/serial, parallel (including MPE) & thread-safe
2003-01-11 04:26:02 +08:00
FUNC_LEAVE_NOAPI(ret_value);
[svn-r790] Updated parameters for H5R API and changed constants from pointers to references
1998-10-27 01:14:00 +08:00
} /* end H5R_get_region() */
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
/*--------------------------------------------------------------------------
NAME
[svn-r790] Updated parameters for H5R API and changed constants from pointers to references
1998-10-27 01:14:00 +08:00
H5Rget_region
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
PURPOSE
Retrieves a dataspace with the region pointed to selected.
USAGE
[svn-r1385] Updated H5Rdereference, H5Rget_object_type and H5Rget_region to accept a location ID (i.e. a file or group ID) as well as the dataset ID. This should allow Dave to get the palettes stored in the file correctly and also enable Bob and/or Bruce's indexing stuff. This change should be folded into the documentation for these three functions for the release. Also, I fixed a number of bugs in the hyperslab and point selection iterators for H5Diterate and they are working correctly now.
1999-06-26 03:36:54 +08:00
hid_t H5Rget_region(id, ref_type, ref)
hid_t id; IN: Dataset reference object is in or location ID of
object that the dataset is located within.
H5R_type_t ref_type; IN: Type of reference to get region of
[svn-r776] Fixed references, object references should be working now.
1998-10-23 06:49:16 +08:00
void *ref; IN: Reference to open.
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
RETURNS
[svn-r797] Changed comments from returning "SUCCEED/FAIL" to "non-negative/negative" and also fixed a few more explicit checks against FAIL.
1998-10-27 05:18:54 +08:00
Valid ID on success, Negative on failure
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
DESCRIPTION
Given a reference to some object, creates a copy of the dataset pointed
to's dataspace and defines a selection in the copy which is the region
pointed to.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
hid_t
[svn-r1385] Updated H5Rdereference, H5Rget_object_type and H5Rget_region to accept a location ID (i.e. a file or group ID) as well as the dataset ID. This should allow Dave to get the palettes stored in the file correctly and also enable Bob and/or Bruce's indexing stuff. This change should be folded into the documentation for these three functions for the release. Also, I fixed a number of bugs in the hyperslab and point selection iterators for H5Diterate and they are working correctly now.
1999-06-26 03:36:54 +08:00
H5Rget_region(hid_t id, H5R_type_t ref_type, void *_ref)
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
{
[svn-r1385] Updated H5Rdereference, H5Rget_object_type and H5Rget_region to accept a location ID (i.e. a file or group ID) as well as the dataset ID. This should allow Dave to get the palettes stored in the file correctly and also enable Bob and/or Bruce's indexing stuff. This change should be folded into the documentation for these three functions for the release. Also, I fixed a number of bugs in the hyperslab and point selection iterators for H5Diterate and they are working correctly now.
1999-06-26 03:36:54 +08:00
H5G_entry_t *loc = NULL; /* Symbol table entry */
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
H5S_t *space = NULL; /* dataspace object */
[svn-r1385] Updated H5Rdereference, H5Rget_object_type and H5Rget_region to accept a location ID (i.e. a file or group ID) as well as the dataset ID. This should allow Dave to get the palettes stored in the file correctly and also enable Bob and/or Bruce's indexing stuff. This change should be folded into the documentation for these three functions for the release. Also, I fixed a number of bugs in the hyperslab and point selection iterators for H5Diterate and they are working correctly now.
1999-06-26 03:36:54 +08:00
H5F_t *file=NULL; /* File object */
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
hid_t ret_value;
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
[svn-r5471] Purpose: Code cleanup Description: Broke the FUNC_ENTER macro into several macros, with more specialized uses (which followup mail will describe). This was designed to move most/all of the checks which could be done at compile time to that point, instead of needlessly performing them (over & over :-) at run-time. This reduces the library's size (and thus staticly linked binaries) and has a minor speedup effect also. Platforms tested: IRIX64 6.5 (modi4) with parallel & FORTRAN enabled, and additional testing on FreeBSD and Solaris immediately after the checkin.
2002-05-29 23:07:55 +08:00
FUNC_ENTER_API(H5Rget_region, FAIL);
[svn-r1385] Updated H5Rdereference, H5Rget_object_type and H5Rget_region to accept a location ID (i.e. a file or group ID) as well as the dataset ID. This should allow Dave to get the palettes stored in the file correctly and also enable Bob and/or Bruce's indexing stuff. This change should be folded into the documentation for these three functions for the release. Also, I fixed a number of bugs in the hyperslab and point selection iterators for H5Diterate and they are working correctly now.
1999-06-26 03:36:54 +08:00
H5TRACE3("i","iRtx",id,ref_type,_ref);
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
/* Check args */
[svn-r3065] Purpose: Code cleanup Description: Remove some warnings... Platforms tested: FreeBSD 4.2 (hawkwind) & IRIX64 6.5 (modi4)
2000-12-02 23:11:57 +08:00
if (NULL == (loc = H5G_loc(id)))
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location");
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
if(ref_type!=H5R_DATASET_REGION)
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR (H5E_ARGS, H5E_BADVALUE, FAIL, "invalid reference type");
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
if(_ref==NULL)
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR (H5E_ARGS, H5E_BADVALUE, FAIL, "invalid reference pointer");
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
[svn-r3065] Purpose: Code cleanup Description: Remove some warnings... Platforms tested: FreeBSD 4.2 (hawkwind) & IRIX64 6.5 (modi4)
2000-12-02 23:11:57 +08:00
/* Get the file pointer from the entry */
file=loc->file;
[svn-r947] Lots of patches to enable dataset region references. The testing for these need to be finished and checked in still.
1998-11-25 08:29:09 +08:00
/* Get the dataspace with the correct region selected */
[svn-r6388] Purpose: Update feature Description: Relax collective constraint for API functions which only read metadata from a file. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} FreeBSD 4.7 w/parallel
2003-02-11 02:44:22 +08:00
if ((space=H5R_get_region(file,H5AC_ind_dxpl_id,ref_type,_ref))==NULL)
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
HGOTO_ERROR (H5E_REFERENCE, H5E_CANTCREATE, FAIL, "unable to create dataspace");
/* Atomize */
if ((ret_value=H5I_register (H5I_DATASPACE, space))<0)
HGOTO_ERROR (H5E_ATOM, H5E_CANTREGISTER, FAIL, "unable to register dataspace atom");
done:
[svn-r6266] Purpose: Code cleanup/new feature. Description: Split FUNC_LEAVE into API and non-API specific versions. This allows a solution to compiling this branch with C++, as well as reducing the size of the binaries produced. Platforms tested: FreeBSD 4.7 (sleipnir) w/serial, parallel (including MPE) & thread-safe
2003-01-11 04:26:02 +08:00
FUNC_LEAVE_API(ret_value);
[svn-r790] Updated parameters for H5R API and changed constants from pointers to references
1998-10-27 01:14:00 +08:00
} /* end H5Rget_region() */
[svn-r757] Added code for object references.
1998-10-14 05:28:53 +08:00
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
/*--------------------------------------------------------------------------
NAME
H5R_get_obj_type
PURPOSE
Retrieves the type of object that an object reference points to
USAGE
[svn-r7192] Purpose: Code cleanup Description: Clean up various minor warnings in the library. Platforms tested: FreeBSD 4.8 (sleipnir) too small to need h5committest
2003-07-10 03:16:17 +08:00
H5G_obj_t H5R_get_obj_type(file, ref_type, ref)
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
H5F_t *file; IN: File the object being dereferenced is within
H5R_type_t ref_type; IN: Type of reference to query
void *ref; IN: Reference to query.
RETURNS
Success: An object type defined in H5Gpublic.h
Failure: H5G_UNKNOWN
DESCRIPTION
Given a reference to some object, this function returns the type of object
pointed to.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
[svn-r7192] Purpose: Code cleanup Description: Clean up various minor warnings in the library. Platforms tested: FreeBSD 4.8 (sleipnir) too small to need h5committest
2003-07-10 03:16:17 +08:00
static H5G_obj_t
[svn-r6387] Purpose: Bug Fix Description: Metadata cache in parallel I/O can cause hangs in applications which perform independent I/O on chunked datasets, because the metadata cache can attempt to flush out dirty metadata from only a single process, instead of collectively from all processes. Solution: Pass a dataset transfer property list down from every API function which could possibly trigger metadata I/O. Then, split the metadata cache into two sets of entries to allow dirty metadata to be set aside when a hash table collision occurs during independent I/O. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} FreeBSD 4.7 (sleipnir) serial & parallel Misc. update: Updated release_docs/RELEASE
2003-02-11 01:26:09 +08:00
H5R_get_obj_type(H5F_t *file, hid_t dxpl_id, H5R_type_t ref_type, void *_ref)
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
{
H5G_entry_t ent; /* Symbol table entry */
uint8_t *p; /* Pointer to OID to store */
[svn-r7192] Purpose: Code cleanup Description: Clean up various minor warnings in the library. Platforms tested: FreeBSD 4.8 (sleipnir) too small to need h5committest
2003-07-10 03:16:17 +08:00
H5G_obj_t ret_value; /* Return value */
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
[svn-r7917] Purpose: Code cleanup Description: Clean up compiler warnings, especially the 'FUNC' variable not used which comes out in production mode. Solution: Had to add a new FUNC_ENTER_NOAPI_NOINIT_NOFUNC macro for those non-API functions which don't need the 'FUNC' variable defined. (This will be _so_ much easier when C99 is standard on all our supposed platforms, since it has a __FUNC__ macro... ) Platforms tested: FreeBSD 4.9 (sleipnir) too minor for h5committest (although there were lots of files changed, the change was minor in each one)
2003-12-07 04:38:31 +08:00
FUNC_ENTER_NOAPI_NOINIT(H5R_get_obj_type);
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
assert(file);
assert(_ref);
/* Initialize the symbol table entry */
HDmemset(&ent,0,sizeof(H5G_entry_t));
ent.type=H5G_NOTHING_CACHED;
ent.file=file;
switch(ref_type) {
case H5R_OBJECT:
{
hobj_ref_t *ref=(hobj_ref_t *)_ref; /* Only object references currently supported */
/* Get the object oid */
[svn-r7334] Purpose: Bug fix Description: Object references were not getting written out correctly to the file, with recent changes to their memory structure. Solution: Convert the object references correctly. Platforms tested: h5committested
2003-08-11 20:43:04 +08:00
ent.header=*ref;
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
} /* end case */
break;
case H5R_DATASET_REGION:
{
hdset_reg_ref_t *ref=(hdset_reg_ref_t *)_ref; /* Get pointer to correct type of reference struct */
H5HG_t hobjid; /* Heap object ID */
uint8_t *buf; /* Buffer to store serialized selection in */
/* Get the heap ID for the dataset region */
[svn-r9250] Purpose: Bug fix Description: Correct typedef for dataset region references to avoid struct alignment issues on Crays. Solution: Change the typedef for hdset_reg_ref_t from a struct to an array of unsigned char's of the correct size and propagate the appropriate adjustments around the code. Platforms tested: FreeBSD 4.10 (sleipnir) Linux 2.4 (verbena) w/fortran Cray T90 (subzero) w/fortran Cray SV1 (wind) w/fortran & parallel Cray T3E (cyclone) w/fortran & parallel
2004-09-14 13:04:25 +08:00
p=(uint8_t *)ref;
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
H5F_addr_decode(ent.file,(const uint8_t **)&p,&(hobjid.addr));
INT32DECODE(p,hobjid.idx);
/* Get the dataset region from the heap (allocate inside routine) */
[svn-r6387] Purpose: Bug Fix Description: Metadata cache in parallel I/O can cause hangs in applications which perform independent I/O on chunked datasets, because the metadata cache can attempt to flush out dirty metadata from only a single process, instead of collectively from all processes. Solution: Pass a dataset transfer property list down from every API function which could possibly trigger metadata I/O. Then, split the metadata cache into two sets of entries to allow dirty metadata to be set aside when a hash table collision occurs during independent I/O. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} FreeBSD 4.7 (sleipnir) serial & parallel Misc. update: Updated release_docs/RELEASE
2003-02-11 01:26:09 +08:00
if((buf=H5HG_read(ent.file,dxpl_id,&hobjid,NULL))==NULL)
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR(H5E_REFERENCE, H5E_READERROR, H5G_UNKNOWN, "Unable to read dataset region information");
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
/* Get the object oid for the dataset */
p=(uint8_t *)buf;
H5F_addr_decode(ent.file,(const uint8_t **)&p,&(ent.header));
/* Free the buffer allocated in H5HG_read() */
H5MM_xfree(buf);
} /* end case */
break;
case H5R_INTERNAL:
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR(H5E_REFERENCE, H5E_UNSUPPORTED, H5G_UNKNOWN, "Internal references are not yet supported");
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
case H5R_BADTYPE:
case H5R_MAXTYPE:
default:
assert("unknown reference type" && 0);
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR(H5E_REFERENCE, H5E_UNSUPPORTED, H5G_UNKNOWN, "internal error (unknown reference type)");
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
} /* end switch */
/* Check to make certain that this object hasn't been deleted since the reference was created */
[svn-r6387] Purpose: Bug Fix Description: Metadata cache in parallel I/O can cause hangs in applications which perform independent I/O on chunked datasets, because the metadata cache can attempt to flush out dirty metadata from only a single process, instead of collectively from all processes. Solution: Pass a dataset transfer property list down from every API function which could possibly trigger metadata I/O. Then, split the metadata cache into two sets of entries to allow dirty metadata to be set aside when a hash table collision occurs during independent I/O. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} FreeBSD 4.7 (sleipnir) serial & parallel Misc. update: Updated release_docs/RELEASE
2003-02-11 01:26:09 +08:00
if(H5O_link(&ent,0,dxpl_id)<=0)
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
HGOTO_ERROR(H5E_REFERENCE, H5E_LINKCOUNT, H5G_UNKNOWN, "dereferencing deleted object");
/* Get the OID type */
[svn-r6387] Purpose: Bug Fix Description: Metadata cache in parallel I/O can cause hangs in applications which perform independent I/O on chunked datasets, because the metadata cache can attempt to flush out dirty metadata from only a single process, instead of collectively from all processes. Solution: Pass a dataset transfer property list down from every API function which could possibly trigger metadata I/O. Then, split the metadata cache into two sets of entries to allow dirty metadata to be set aside when a hash table collision occurs during independent I/O. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} FreeBSD 4.7 (sleipnir) serial & parallel Misc. update: Updated release_docs/RELEASE
2003-02-11 01:26:09 +08:00
ret_value=H5G_get_type(&ent,dxpl_id);
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
done:
[svn-r6266] Purpose: Code cleanup/new feature. Description: Split FUNC_LEAVE into API and non-API specific versions. This allows a solution to compiling this branch with C++, as well as reducing the size of the binaries produced. Platforms tested: FreeBSD 4.7 (sleipnir) w/serial, parallel (including MPE) & thread-safe
2003-01-11 04:26:02 +08:00
FUNC_LEAVE_NOAPI(ret_value);
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
} /* end H5R_get_obj_type() */
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
/*--------------------------------------------------------------------------
NAME
H5Rget_obj_type
PURPOSE
Retrieves the type of object that an object reference points to
USAGE
int H5Rget_obj_type(id, ref_type, ref)
hid_t id; IN: Dataset reference object is in or location ID of
object that the dataset is located within.
H5R_type_t ref_type; IN: Type of reference to query
void *ref; IN: Reference to query.
RETURNS
Success: An object type defined in H5Gpublic.h
Failure: H5G_UNKNOWN
DESCRIPTION
Given a reference to some object, this function returns the type of object
pointed to.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
[svn-r6784] Purpose: Bug fix Description: Corrected a couple of problems with Ray's v1.4 compat checkin yesterday. Platforms tested: FreeBSD 4.8 (sleipnir) w/ & w/o --enable_hdf5v1_4 compat switch Triple check unnecessary.
2003-04-30 21:55:51 +08:00
H5G_obj_t
H5Rget_obj_type(hid_t id, H5R_type_t ref_type, void *_ref)
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
{
H5G_entry_t *loc = NULL; /* Symbol table entry */
H5F_t *file=NULL; /* File object */
[svn-r6784] Purpose: Bug fix Description: Corrected a couple of problems with Ray's v1.4 compat checkin yesterday. Platforms tested: FreeBSD 4.8 (sleipnir) w/ & w/o --enable_hdf5v1_4 compat switch Triple check unnecessary.
2003-04-30 21:55:51 +08:00
H5G_obj_t ret_value;
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
[svn-r5471] Purpose: Code cleanup Description: Broke the FUNC_ENTER macro into several macros, with more specialized uses (which followup mail will describe). This was designed to move most/all of the checks which could be done at compile time to that point, instead of needlessly performing them (over & over :-) at run-time. This reduces the library's size (and thus staticly linked binaries) and has a minor speedup effect also. Platforms tested: IRIX64 6.5 (modi4) with parallel & FORTRAN enabled, and additional testing on FreeBSD and Solaris immediately after the checkin.
2002-05-29 23:07:55 +08:00
FUNC_ENTER_API(H5Rget_obj_type, H5G_UNKNOWN);
[svn-r7626] Purpose: Update dependencies and tracing information Platforms tested: Linux 2.4 (verbena) w/FORTRAN too minor for h5committest
2003-10-14 23:46:38 +08:00
H5TRACE3("Go","iRtx",id,ref_type,_ref);
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
/* Check args */
if (NULL == (loc = H5G_loc(id)))
[svn-r6843] Purpose: Code cleanup Description: Clean up warnings exposed by compiling on O2K. Also, revert some of Bill and my changes to the H5S_mpi_opt_types_g, etc. and settle them back into their original location. Platforms tested: h5committested.
2003-05-10 02:18:21 +08:00
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, H5G_UNKNOWN, "not a location");
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
if(ref_type<=H5R_BADTYPE || ref_type>=H5R_MAXTYPE)
[svn-r6843] Purpose: Code cleanup Description: Clean up warnings exposed by compiling on O2K. Also, revert some of Bill and my changes to the H5S_mpi_opt_types_g, etc. and settle them back into their original location. Platforms tested: h5committested.
2003-05-10 02:18:21 +08:00
HGOTO_ERROR (H5E_ARGS, H5E_BADVALUE, H5G_UNKNOWN, "invalid reference type");
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
if(_ref==NULL)
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR (H5E_ARGS, H5E_BADVALUE, H5G_UNKNOWN, "invalid reference pointer");
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
/* Get the file pointer from the entry */
file=loc->file;
/* Get the object information */
[svn-r6388] Purpose: Update feature Description: Relax collective constraint for API functions which only read metadata from a file. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} FreeBSD 4.7 w/parallel
2003-02-11 02:44:22 +08:00
if ((ret_value=H5R_get_obj_type(file,H5AC_ind_dxpl_id,ref_type,_ref))<0)
[svn-r5842] Purpose: Code cleanup Description: Change most (all?) HRETURN_ERROR macros to HGOTO_ERROR macros, along with HRETURN macros to HGOTO_DONE macros. This unifies the error return path from functions and reduces the size of the library by up to 10% on some platforms. Additionally, I improved a lot of the error cleanup code in many routines. Platforms tested: FreeBSD 4.6 (sleipnir) serial & parallel and IRIX64 6.5 (modi4) serial & parallel.
2002-08-09 00:52:55 +08:00
HGOTO_ERROR(H5E_REFERENCE, H5E_CANTINIT, H5G_UNKNOWN, "unable to determine object type");
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
done:
[svn-r6266] Purpose: Code cleanup/new feature. Description: Split FUNC_LEAVE into API and non-API specific versions. This allows a solution to compiling this branch with C++, as well as reducing the size of the binaries produced. Platforms tested: FreeBSD 4.7 (sleipnir) w/serial, parallel (including MPE) & thread-safe
2003-01-11 04:26:02 +08:00
FUNC_LEAVE_API(ret_value);
[svn-r4747] Purpose: Bug Fix. Description: The H5Rget_object_type function could not get the object type for dataset region references. Solution: Added a new function, H5Rget_obj_type, to replace H5Rget_object_type. The new function requires the reference type as an additional parameter, in order to allow queries on different reference types to be performed correctly. Platforms tested: FreeBSD 4.4. (sleipnir)
2001-12-21 04:51:30 +08:00
} /* end H5Rget_obj_type() */
[svn-r1332] Fixes to get the VL datatypes working. The only function currently working is H5Tvlen_create().
1999-06-12 06:04:42 +08:00
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