hdf5/src/H5G.c

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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
1997-07-31 05:17:56 +08:00
/*-------------------------------------------------------------------------
*
* Created: H5G.c
* Jul 18 1997
* Robb Matzke <matzke@llnl.gov>
*
* Purpose: Symbol table functions. The functions that begin with
* `H5G_stab_' don't understand the naming system; they operate
* on a single symbol table at a time.
*
* The functions that begin with `H5G_node_' operate on the leaf
* nodes of a symbol table B-tree. They should be defined in
* the H5Gnode.c file.
*
* The remaining functions know how to traverse the group
* directed graph.
*
* Names: Object names are a slash-separated list of components. If
* the name begins with a slash then it's absolute, otherwise
* it's relative ("/foo/bar" is absolute while "foo/bar" is
* relative). Multiple consecutive slashes are treated as
* single slashes and trailing slashes are ignored. The special
* case `/' is the root group. Every file has a root group.
*
* API functions that look up names take a location ID and a
* name. The location ID can be a file ID or a group ID and the
* name can be relative or absolute.
*
* +--------------+----------- +--------------------------------+
* | Location ID | Name | Meaning |
* +--------------+------------+--------------------------------+
* | File ID | "/foo/bar" | Find `foo' within `bar' within |
* | | | the root group of the specified|
* | | | file. |
* +--------------+------------+--------------------------------+
* | File ID | "foo/bar" | Find `foo' within `bar' within |
* | | | the current working group of |
* | | | the specified file. |
* +--------------+------------+--------------------------------+
* | File ID | "/" | The root group of the specified|
* | | | file. |
* +--------------+------------+--------------------------------+
* | File ID | "." | The current working group of |
* | | | the specified file. |
* +--------------+------------+--------------------------------+
* | Group ID | "/foo/bar" | Find `foo' within `bar' within |
* | | | the root group of the file |
* | | | containing the specified group.|
* +--------------+------------+--------------------------------+
* | Group ID | "foo/bar" | File `foo' within `bar' within |
* | | | the specified group. |
* +--------------+------------+--------------------------------+
* | Group ID | "/" | The root group of the file |
* | | | containing the specified group.|
* +--------------+------------+--------------------------------+
* | Group ID | "." | The specified group. |
* +--------------+------------+--------------------------------+
1997-07-31 05:17:56 +08:00
*
*
*-------------------------------------------------------------------------
*/
#define H5F_PACKAGE /*suppress error about including H5Fpkg */
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#define H5G_PACKAGE /*suppress error about including H5Gpkg */
/* Interface initialization */
#define H5_INTERFACE_INIT_FUNC H5G_init_interface
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/* Packages needed by this file... */
#include "H5private.h" /* Generic Functions */
#include "H5Eprivate.h" /* Error handling */
#include "H5Fpkg.h" /* File access */
#include "H5FLprivate.h" /* Free Lists */
#include "H5Gpkg.h" /* Groups */
#include "H5HLprivate.h" /* Local Heaps */
#include "H5Iprivate.h" /* IDs */
#include "H5MMprivate.h" /* Memory management */
#include "H5Pprivate.h" /* Property lists */
[svn-r15] ./src/H5AC.c ./src/H5ACprivate.h ./src/H5ACproto.h ./src/H5Bproto.h ./src/H5Gproto.h ./src/H5Hproto.h ./src/H5MFprivate.h ./src/H5MFproto.h ./src/H5MM.c ./src/H5MMprivate.h ./src/H5MMproto.h Changed my e-mail address. ./src/H5O.c NEW ./src/H5Onull.c NEW ./src/H5Ocont. NEW ./src/H5Ostab.c NEW New functions for dealing with object headers. The H5O.c is the generic stuff, and each particular message has a source file for the specific stuff. Use ./src/H5Ostab.c as a model for implementing other messages. ./src/Makefile ./src/test/Makefile Added new files ./src/debug.c Added debugging calls for object headers. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c ./src/H5MF.c Changed my e-mail address. Improved error handling. ./src/H5Eprivate.h ./src/H5Eproto.h Added more error symbols ./src/H5F.c Changed my e-mail address. Used macros for sizeof offsets and lengths. Added the interface initialization function to H5F_block_read() and H5F_block_write(). Updated H5F_debug() ./src/H5Fprivate.h Got rid of H5F_symbol_table_size(). Use H5G_SIZEOF_ENTRY() instead. Reformatted H5F_decode_offset() for readability. ./src/H5G.c Changed my e-mail address. Improved error handling. Replaced not_implemented_yet__*() with real functions from H5O. ./src/H5Gprivate.h Changed `symtab' to `stab' to be consistent with other stuff. ./src/H5H.c ./src/H5Hprivate.h Changed my e-mail address. Improved error handling. Added an extra argument to H5H_new() to indicate whether you want a global heap or a local heap. ./src/hdf5gen.h Added NELMTS() Fixed FUNC_ENTER() Rewrote FUNC_LEAVE() in terms of HRETURN(). ./src/hdf5meta.h Added `const' to the decode macros. ./src/hdf5pabl.h Added PABLO_SAVE() ./test/testhdf5.c ./test/testhdf5.h Added calls for object header testing. ./test/theap.c Turned off some output.
1997-08-08 03:23:00 +08:00
/* Local macros */
#define H5G_INIT_HEAP 8192
#define H5G_RESERVED_ATOMS 0
/* Local typedefs */
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/* User data for path traversal routine for "insertion file" routine */
typedef struct {
H5F_t *file; /* Pointer to the file for insertion */
} H5G_trav_ud1_t;
/* User data for path traversal routine for moving a link */
typedef struct {
H5G_obj_t type; /* Type of object being moved */
const char *dst_name; /* Destination name for moving object */
H5G_loc_t *dst_loc; /* Destination location for moving object */
} H5G_trav_ud2_t;
/* User data for path traversal callback to creating link */
typedef struct {
H5F_t *file; /* Pointer to the file */
hid_t dxpl_id; /* Dataset transfer property list */
H5O_link_t *lnk; /* Pointer to link information to insert */
} H5G_trav_ud3_t;
/* User data for path traversal routine for getting object info */
typedef struct {
H5G_stat_t *statbuf; /* Stat buffer about object */
hbool_t follow_link; /* Whether we are following a link or not */
hid_t dxpl_id; /* Dataset transfer property list */
} H5G_trav_ud4_t;
/* User data for path traversal routine for getting soft link value */
typedef struct {
size_t size; /* Size of user buffer */
char *buf; /* User buffer */
} H5G_trav_ud5_t;
/* User data for path traversal routine for removing link (i.e. unlink) */
typedef struct {
hid_t dxpl_id; /* Dataset transfer property list */
} H5G_trav_ud6_t;
/* User data for path traversal routine for inserting object */
typedef struct {
H5G_loc_t *obj_loc; /* Object location */
hid_t dxpl_id; /* Dataset transfer property list */
} H5G_trav_ud7_t;
/* Package variables */
/* Local variables */
[svn-r6252] Purpose: Lots of performance improvements & a couple new internal API interfaces. Description: Performance Improvements: - Cached file offset & length sizes in shared file struct, to avoid constantly looking them up in the FCPL. - Generic property improvements: - Added "revision" number to generic property classes to speed up comparisons. - Changed method of storing properties from using a hash-table to the TBBT routines in the library. - Share the propery names between classes and the lists derived from them. - Removed redundant 'def_value' buffer from each property. - Switching code to use a "copy on write" strategy for properties in each list, where the properties in each list are shared with the properties in the class, until a property's value is changed in a list. - Fixed error in layout code which was allocating too many buffers. - Redefined public macros of the form (H5open()/H5check, <variable>) internally to only be (<variable>), avoiding innumerable useless calls to H5open() and H5check_version(). - Reuse already zeroed buffers in H5F_contig_fill instead of constantly re-zeroing them. - Don't write fill values if writing entire dataset. - Use gettimeofday() system call instead of time() system when checking the modification time of a dataset. - Added reference counted string API and use it for tracking the names of objects opening in a file (for the ID->name code). - Removed redundant H5P_get() calls in B-tree routines. - Redefine H5T datatype macros internally to the library, to avoid calling H5check redundantly. - Keep dataspace information for dataset locally instead of reading from disk each time. Added new module to track open objects in a file, to allow this (which will be useful eventually for some FPH5 metadata caching issues). - Remove H5AC_find macro which was inlining metadata cache lookups, and call function instead. - Remove redundant memset() calls from H5G_namei() routine. - Remove redundant checking of object type when locating objects in metadata cache and rely on the address only. - Create default dataset object to use when default dataset creation property list is used to create datasets, bypassing querying for all the property list values. - Use default I/O vector size when performing raw data with the default dataset transfer property list, instead of querying for I/O vector size. - Remove H5P_DEFAULT internally to the library, replacing it with more specific default property list based on the type of property list needed. - Remove redundant memset() calls in object header message (H5O*) routines. - Remove redunant memset() calls in data I/O routines. - Split free-list allocation routines into malloc() and calloc()- like routines, instead of one combined routine. - Remove lots of indirection in H5O*() routines. - Simplify metadata cache entry comparison routine (used when flushing entire cache out). - Only enable metadata cache statistics when H5AC_DEBUG is turned on, instead of always tracking them. - Simplify address comparison macro (H5F_addr_eq). - Remove redundant metadata cache entry protections during dataset creation by protecting the object header once and making all the modifications necessary for the dataset creation before unprotecting it. - Reduce # of "number of element in extent" computations performed by computing and storing the value during dataspace creation. - Simplify checking for group location's file information, when file has not been involving in file-mounting operations. - Use binary encoding for modification time, instead of ASCII. - Hoist H5HL_peek calls (to get information in a local heap) out of loops in many group routine. - Use static variable for iterators of selections, instead of dynamically allocation them each time. - Lookup & insert new entries in one step, avoiding traversing group's B-tree twice. - Fixed memory leak in H5Gget_objname_idx() routine (tangential to performance improvements, but fixed along the way). - Use free-list for reference counted strings. - Don't bother copying object names into cached group entries, since they are re-created when an object is opened. The benchmark I used to measure these results created several thousand small (2K) datasets in a file and wrote out the data for them. This is Elena's "regular.c" benchmark. These changes resulted in approximately ~4.3x speedup of the development branch when compared to the previous code in the development branch and ~1.4x speedup compared to the release branch. Additionally, these changes reduce the total memory used (code and data) by the development branch by ~800KB, bringing the development branch back into the same ballpark as the release branch. I'll send out a more detailed description of the benchmark results as a followup note. New internal API routines: Added "reference counted strings" API for tracking strings that get used by multiple owners without duplicating the strings. Added "ternary search tree" API for text->object mappings. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} Other platforms/configurations tested? FreeBSD 4.7 (sleipnir) serial & parallel Solaris 2.6 (baldric) serial
2003-01-10 01:20:03 +08:00
/* Declare a free list to manage the H5G_t struct */
H5FL_DEFINE(H5G_t);
H5FL_DEFINE(H5G_shared_t);
/* Private prototypes */
static char * H5G_normalize(const char *name);
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static H5G_t *H5G_create(H5G_loc_t *loc, const char *name, hid_t dxpl_id,
hid_t gcpl_id, hid_t gapl_id);
2005-11-15 10:55:39 +08:00
static herr_t H5G_open_oid(H5G_t *grp, hid_t dxpl_id);
static herr_t H5G_insert_cb(H5G_loc_t *grp_loc/*in*/, const char *name,
const H5O_link_t *lnk, H5G_loc_t *obj_loc, void *_udata/*in,out*/);
static herr_t H5G_get_objinfo_cb(H5G_loc_t *grp_loc/*in*/, const char *name,
const H5O_link_t *lnk, H5G_loc_t *obj_loc, void *_udata/*in,out*/);
static herr_t H5G_link_cb(H5G_loc_t *grp_loc/*in*/, const char *name,
const H5O_link_t *lnk, H5G_loc_t *obj_loc, void *_udata/*in,out*/);
static herr_t H5G_link_real(H5G_loc_t *link_loc, const char *link_name,
H5F_t *file, H5O_link_t *lnk, hid_t dxpl_id);
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static herr_t H5G_link(H5G_loc_t *cur_loc, const char *cur_name,
H5G_loc_t *link_loc, const char *link_name, H5G_link_t type,
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unsigned traverse_flags, hid_t dxpl_id);
static herr_t H5G_linkval_cb(H5G_loc_t *grp_loc/*in*/, const char *name,
const H5O_link_t *lnk, H5G_loc_t *obj_loc, void *_udata/*in,out*/);
static herr_t H5G_linkval(H5G_loc_t *loc, const char *name, size_t size,
char *buf/*out*/, hid_t dxpl_id);
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static herr_t H5G_set_comment(H5G_loc_t *loc, const char *name,
const char *buf, hid_t dxpl_id);
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static int H5G_get_comment(H5G_loc_t *loc, const char *name,
size_t bufsize, char *buf, hid_t dxpl_id);
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static herr_t H5G_unlink_cb(H5G_loc_t *grp_loc/*in*/, const char *name,
const H5O_link_t *lnk, H5G_loc_t *obj_loc, void *_udata/*in,out*/);
static herr_t H5G_unlink(H5G_loc_t *loc, const char *name, hid_t dxpl_id);
static herr_t H5G_move_cb(H5G_loc_t *grp_loc/*in*/, const char *name,
const H5O_link_t *lnk, H5G_loc_t *obj_loc, void *_udata/*in,out*/);
static herr_t H5G_move(H5G_loc_t *src_loc, const char *src_name,
H5G_loc_t *dst_loc, const char *dst_name, hid_t dxpl_id);
static herr_t H5G_insertion_file_cb(H5G_loc_t *grp_loc/*in*/, const char *name,
const H5O_link_t *lnk, H5G_loc_t *obj_loc, void *_udata/*in,out*/);
static herr_t H5G_copy(H5G_loc_t *src_loc, H5G_loc_t *dst_loc,
const char *name_dst, hid_t plist_id);
[svn-r129] Changes since 19970916 ---------------------- ./config/depend.in Fixed backslashes in sed script because the H5Gnode.c dependency info was disappearing. You'll have to rerun config.status to rebuild the Makefiles unless you use gnu make. ./config/conclude.in Also removes emacs backup files, TAGS, and svf backup files. ./config/linux Grouped gcc flags and added provisions for debugging vs. production. ./html/H5.format.html Updated messages 0x0008, 0x0009, and 0x000A. ./html/storage.html Documentation describing storage schemes. ./src/Makefile.in ./test/Makefile.in New source files. ./src/H5A.c ./src/H5Apublic.h ./src/H5C.c Changed VOIDP to void* in a couple places. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Bprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h ./src/H5H.c ./src/H5O.c Removed `const' from some variables because H5G_node_found() wanted to modify it's udata argument. Removing const there caused it to cascade to these other locations. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5H.c ./src/H5O.c Added an extra argument to H5AC_find_f() and H5AC_protect(). This arg gets passed to the load() method. Also added an extra argument to the H5AC_find() macro. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra argument passed to the sizeof_rkey() method. ./src/H5Fprivate.c ./src/H5Fistore.c (new) Added indexed I/O operations. ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h Beginning to add H5G_open/close and related bug fixes. ./src/H5Oprivate.h ./src/H5Oistore.c (new) Added the H5O_ISTORE messsage (0x0008) for indexed storage of objects. ./src/H5private.h Added extra braces around both sides of the FUNC_ENTER() and FUNC_LEAVE() macros so FUNC_ENTER() can appear before declarations or after executable statements the second case is used by H5G_namei() to initialize output arguments to sane values before FUNC_ENTER() might return failure. int f () { int decl1; printf ("This happens before FUNC_ENTER()\n"); FUNC_ENTER (...); int another_declaration; ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra arguments for key encoding and decoding. ./src/H5E.c ./src/H5Epublic.h ./src/H5Fistore.c ./src/H5Oistore.c ./src/H5Oprivate.h Indexed, chunked, sparse storage (not ready for general consumption yet). ./src/H5V.c (new) ./src/H5Vprivate.h (new) ./test/hyperslab.c (new) Vector, array, and hyperslab functions. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Fistore.c ./src/H5Gnode.c ./src/H5V.c ./src/H5Vprivate.h ./test/hyperslab.c Added functionality for indexed storage. ./src/H5F.c Fixed problems with seek optimizing. Recommend we disable it until we can implement it in the file/address class since all of HDF5 must be aware of it. ./src/H5O.c Fixed comeent speling erorr :-) ./MANIFEST Added new files. ./config/conclude.in Added the word `Testing' to the test cases. So if a test program is called hyperslab then the make output will contain the line `Testing hyperslab'. ./config/linux The default file I/O library is Posix section 2 on my linux machine so I can do some I/O performance testing. ./src/H5C.c ./src/H5Cprivate.h ./src/H5Cpublic.h Added ability to set size of indexed-storage B-tree. ./src/H5D.c ./src/H5E.c ./src/H5Epublic.h ./src/H5F.c ./src/H5Fprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5Gshad.c ./src/H5Gstab.c ./test/stab.c Changed `directory' to `group' in numerous places. ./src/H5private.h The FILELIB constant can be set on the compile command-line. ./src/istore.c NEW Tests for indexed storage.
1997-10-21 07:14:35 +08:00
/*-------------------------------------------------------------------------
* Function: H5Gcreate
[svn-r129] Changes since 19970916 ---------------------- ./config/depend.in Fixed backslashes in sed script because the H5Gnode.c dependency info was disappearing. You'll have to rerun config.status to rebuild the Makefiles unless you use gnu make. ./config/conclude.in Also removes emacs backup files, TAGS, and svf backup files. ./config/linux Grouped gcc flags and added provisions for debugging vs. production. ./html/H5.format.html Updated messages 0x0008, 0x0009, and 0x000A. ./html/storage.html Documentation describing storage schemes. ./src/Makefile.in ./test/Makefile.in New source files. ./src/H5A.c ./src/H5Apublic.h ./src/H5C.c Changed VOIDP to void* in a couple places. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Bprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h ./src/H5H.c ./src/H5O.c Removed `const' from some variables because H5G_node_found() wanted to modify it's udata argument. Removing const there caused it to cascade to these other locations. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5H.c ./src/H5O.c Added an extra argument to H5AC_find_f() and H5AC_protect(). This arg gets passed to the load() method. Also added an extra argument to the H5AC_find() macro. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra argument passed to the sizeof_rkey() method. ./src/H5Fprivate.c ./src/H5Fistore.c (new) Added indexed I/O operations. ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h Beginning to add H5G_open/close and related bug fixes. ./src/H5Oprivate.h ./src/H5Oistore.c (new) Added the H5O_ISTORE messsage (0x0008) for indexed storage of objects. ./src/H5private.h Added extra braces around both sides of the FUNC_ENTER() and FUNC_LEAVE() macros so FUNC_ENTER() can appear before declarations or after executable statements the second case is used by H5G_namei() to initialize output arguments to sane values before FUNC_ENTER() might return failure. int f () { int decl1; printf ("This happens before FUNC_ENTER()\n"); FUNC_ENTER (...); int another_declaration; ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra arguments for key encoding and decoding. ./src/H5E.c ./src/H5Epublic.h ./src/H5Fistore.c ./src/H5Oistore.c ./src/H5Oprivate.h Indexed, chunked, sparse storage (not ready for general consumption yet). ./src/H5V.c (new) ./src/H5Vprivate.h (new) ./test/hyperslab.c (new) Vector, array, and hyperslab functions. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Fistore.c ./src/H5Gnode.c ./src/H5V.c ./src/H5Vprivate.h ./test/hyperslab.c Added functionality for indexed storage. ./src/H5F.c Fixed problems with seek optimizing. Recommend we disable it until we can implement it in the file/address class since all of HDF5 must be aware of it. ./src/H5O.c Fixed comeent speling erorr :-) ./MANIFEST Added new files. ./config/conclude.in Added the word `Testing' to the test cases. So if a test program is called hyperslab then the make output will contain the line `Testing hyperslab'. ./config/linux The default file I/O library is Posix section 2 on my linux machine so I can do some I/O performance testing. ./src/H5C.c ./src/H5Cprivate.h ./src/H5Cpublic.h Added ability to set size of indexed-storage B-tree. ./src/H5D.c ./src/H5E.c ./src/H5Epublic.h ./src/H5F.c ./src/H5Fprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5Gshad.c ./src/H5Gstab.c ./test/stab.c Changed `directory' to `group' in numerous places. ./src/H5private.h The FILELIB constant can be set on the compile command-line. ./src/istore.c NEW Tests for indexed storage.
1997-10-21 07:14:35 +08:00
*
* Purpose: Creates a new group relative to LOC_ID and gives it the
* specified NAME. The group is opened for write access
* and it's object ID is returned.
[svn-r129] Changes since 19970916 ---------------------- ./config/depend.in Fixed backslashes in sed script because the H5Gnode.c dependency info was disappearing. You'll have to rerun config.status to rebuild the Makefiles unless you use gnu make. ./config/conclude.in Also removes emacs backup files, TAGS, and svf backup files. ./config/linux Grouped gcc flags and added provisions for debugging vs. production. ./html/H5.format.html Updated messages 0x0008, 0x0009, and 0x000A. ./html/storage.html Documentation describing storage schemes. ./src/Makefile.in ./test/Makefile.in New source files. ./src/H5A.c ./src/H5Apublic.h ./src/H5C.c Changed VOIDP to void* in a couple places. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Bprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h ./src/H5H.c ./src/H5O.c Removed `const' from some variables because H5G_node_found() wanted to modify it's udata argument. Removing const there caused it to cascade to these other locations. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5H.c ./src/H5O.c Added an extra argument to H5AC_find_f() and H5AC_protect(). This arg gets passed to the load() method. Also added an extra argument to the H5AC_find() macro. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra argument passed to the sizeof_rkey() method. ./src/H5Fprivate.c ./src/H5Fistore.c (new) Added indexed I/O operations. ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h Beginning to add H5G_open/close and related bug fixes. ./src/H5Oprivate.h ./src/H5Oistore.c (new) Added the H5O_ISTORE messsage (0x0008) for indexed storage of objects. ./src/H5private.h Added extra braces around both sides of the FUNC_ENTER() and FUNC_LEAVE() macros so FUNC_ENTER() can appear before declarations or after executable statements the second case is used by H5G_namei() to initialize output arguments to sane values before FUNC_ENTER() might return failure. int f () { int decl1; printf ("This happens before FUNC_ENTER()\n"); FUNC_ENTER (...); int another_declaration; ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra arguments for key encoding and decoding. ./src/H5E.c ./src/H5Epublic.h ./src/H5Fistore.c ./src/H5Oistore.c ./src/H5Oprivate.h Indexed, chunked, sparse storage (not ready for general consumption yet). ./src/H5V.c (new) ./src/H5Vprivate.h (new) ./test/hyperslab.c (new) Vector, array, and hyperslab functions. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Fistore.c ./src/H5Gnode.c ./src/H5V.c ./src/H5Vprivate.h ./test/hyperslab.c Added functionality for indexed storage. ./src/H5F.c Fixed problems with seek optimizing. Recommend we disable it until we can implement it in the file/address class since all of HDF5 must be aware of it. ./src/H5O.c Fixed comeent speling erorr :-) ./MANIFEST Added new files. ./config/conclude.in Added the word `Testing' to the test cases. So if a test program is called hyperslab then the make output will contain the line `Testing hyperslab'. ./config/linux The default file I/O library is Posix section 2 on my linux machine so I can do some I/O performance testing. ./src/H5C.c ./src/H5Cprivate.h ./src/H5Cpublic.h Added ability to set size of indexed-storage B-tree. ./src/H5D.c ./src/H5E.c ./src/H5Epublic.h ./src/H5F.c ./src/H5Fprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5Gshad.c ./src/H5Gstab.c ./test/stab.c Changed `directory' to `group' in numerous places. ./src/H5private.h The FILELIB constant can be set on the compile command-line. ./src/istore.c NEW Tests for indexed storage.
1997-10-21 07:14:35 +08:00
*
* The optional SIZE_HINT specifies how much file space to
* reserve to store the names that will appear in this
* group. If a non-positive value is supplied for the SIZE_HINT
* then a default size is chosen.
[svn-r129] Changes since 19970916 ---------------------- ./config/depend.in Fixed backslashes in sed script because the H5Gnode.c dependency info was disappearing. You'll have to rerun config.status to rebuild the Makefiles unless you use gnu make. ./config/conclude.in Also removes emacs backup files, TAGS, and svf backup files. ./config/linux Grouped gcc flags and added provisions for debugging vs. production. ./html/H5.format.html Updated messages 0x0008, 0x0009, and 0x000A. ./html/storage.html Documentation describing storage schemes. ./src/Makefile.in ./test/Makefile.in New source files. ./src/H5A.c ./src/H5Apublic.h ./src/H5C.c Changed VOIDP to void* in a couple places. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Bprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h ./src/H5H.c ./src/H5O.c Removed `const' from some variables because H5G_node_found() wanted to modify it's udata argument. Removing const there caused it to cascade to these other locations. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5H.c ./src/H5O.c Added an extra argument to H5AC_find_f() and H5AC_protect(). This arg gets passed to the load() method. Also added an extra argument to the H5AC_find() macro. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra argument passed to the sizeof_rkey() method. ./src/H5Fprivate.c ./src/H5Fistore.c (new) Added indexed I/O operations. ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h Beginning to add H5G_open/close and related bug fixes. ./src/H5Oprivate.h ./src/H5Oistore.c (new) Added the H5O_ISTORE messsage (0x0008) for indexed storage of objects. ./src/H5private.h Added extra braces around both sides of the FUNC_ENTER() and FUNC_LEAVE() macros so FUNC_ENTER() can appear before declarations or after executable statements the second case is used by H5G_namei() to initialize output arguments to sane values before FUNC_ENTER() might return failure. int f () { int decl1; printf ("This happens before FUNC_ENTER()\n"); FUNC_ENTER (...); int another_declaration; ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra arguments for key encoding and decoding. ./src/H5E.c ./src/H5Epublic.h ./src/H5Fistore.c ./src/H5Oistore.c ./src/H5Oprivate.h Indexed, chunked, sparse storage (not ready for general consumption yet). ./src/H5V.c (new) ./src/H5Vprivate.h (new) ./test/hyperslab.c (new) Vector, array, and hyperslab functions. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Fistore.c ./src/H5Gnode.c ./src/H5V.c ./src/H5Vprivate.h ./test/hyperslab.c Added functionality for indexed storage. ./src/H5F.c Fixed problems with seek optimizing. Recommend we disable it until we can implement it in the file/address class since all of HDF5 must be aware of it. ./src/H5O.c Fixed comeent speling erorr :-) ./MANIFEST Added new files. ./config/conclude.in Added the word `Testing' to the test cases. So if a test program is called hyperslab then the make output will contain the line `Testing hyperslab'. ./config/linux The default file I/O library is Posix section 2 on my linux machine so I can do some I/O performance testing. ./src/H5C.c ./src/H5Cprivate.h ./src/H5Cpublic.h Added ability to set size of indexed-storage B-tree. ./src/H5D.c ./src/H5E.c ./src/H5Epublic.h ./src/H5F.c ./src/H5Fprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5Gshad.c ./src/H5Gstab.c ./test/stab.c Changed `directory' to `group' in numerous places. ./src/H5private.h The FILELIB constant can be set on the compile command-line. ./src/istore.c NEW Tests for indexed storage.
1997-10-21 07:14:35 +08:00
*
* See also: H5Gset(), H5Gpush(), H5Gpop()
[svn-r129] Changes since 19970916 ---------------------- ./config/depend.in Fixed backslashes in sed script because the H5Gnode.c dependency info was disappearing. You'll have to rerun config.status to rebuild the Makefiles unless you use gnu make. ./config/conclude.in Also removes emacs backup files, TAGS, and svf backup files. ./config/linux Grouped gcc flags and added provisions for debugging vs. production. ./html/H5.format.html Updated messages 0x0008, 0x0009, and 0x000A. ./html/storage.html Documentation describing storage schemes. ./src/Makefile.in ./test/Makefile.in New source files. ./src/H5A.c ./src/H5Apublic.h ./src/H5C.c Changed VOIDP to void* in a couple places. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Bprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h ./src/H5H.c ./src/H5O.c Removed `const' from some variables because H5G_node_found() wanted to modify it's udata argument. Removing const there caused it to cascade to these other locations. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5H.c ./src/H5O.c Added an extra argument to H5AC_find_f() and H5AC_protect(). This arg gets passed to the load() method. Also added an extra argument to the H5AC_find() macro. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra argument passed to the sizeof_rkey() method. ./src/H5Fprivate.c ./src/H5Fistore.c (new) Added indexed I/O operations. ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h Beginning to add H5G_open/close and related bug fixes. ./src/H5Oprivate.h ./src/H5Oistore.c (new) Added the H5O_ISTORE messsage (0x0008) for indexed storage of objects. ./src/H5private.h Added extra braces around both sides of the FUNC_ENTER() and FUNC_LEAVE() macros so FUNC_ENTER() can appear before declarations or after executable statements the second case is used by H5G_namei() to initialize output arguments to sane values before FUNC_ENTER() might return failure. int f () { int decl1; printf ("This happens before FUNC_ENTER()\n"); FUNC_ENTER (...); int another_declaration; ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra arguments for key encoding and decoding. ./src/H5E.c ./src/H5Epublic.h ./src/H5Fistore.c ./src/H5Oistore.c ./src/H5Oprivate.h Indexed, chunked, sparse storage (not ready for general consumption yet). ./src/H5V.c (new) ./src/H5Vprivate.h (new) ./test/hyperslab.c (new) Vector, array, and hyperslab functions. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Fistore.c ./src/H5Gnode.c ./src/H5V.c ./src/H5Vprivate.h ./test/hyperslab.c Added functionality for indexed storage. ./src/H5F.c Fixed problems with seek optimizing. Recommend we disable it until we can implement it in the file/address class since all of HDF5 must be aware of it. ./src/H5O.c Fixed comeent speling erorr :-) ./MANIFEST Added new files. ./config/conclude.in Added the word `Testing' to the test cases. So if a test program is called hyperslab then the make output will contain the line `Testing hyperslab'. ./config/linux The default file I/O library is Posix section 2 on my linux machine so I can do some I/O performance testing. ./src/H5C.c ./src/H5Cprivate.h ./src/H5Cpublic.h Added ability to set size of indexed-storage B-tree. ./src/H5D.c ./src/H5E.c ./src/H5Epublic.h ./src/H5F.c ./src/H5Fprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5Gshad.c ./src/H5Gstab.c ./test/stab.c Changed `directory' to `group' in numerous places. ./src/H5private.h The FILELIB constant can be set on the compile command-line. ./src/istore.c NEW Tests for indexed storage.
1997-10-21 07:14:35 +08:00
*
* Errors:
*
* Return: Success: The object ID of a new, empty group open for
* writing. Call H5Gclose() when finished with
* the group.
[svn-r129] Changes since 19970916 ---------------------- ./config/depend.in Fixed backslashes in sed script because the H5Gnode.c dependency info was disappearing. You'll have to rerun config.status to rebuild the Makefiles unless you use gnu make. ./config/conclude.in Also removes emacs backup files, TAGS, and svf backup files. ./config/linux Grouped gcc flags and added provisions for debugging vs. production. ./html/H5.format.html Updated messages 0x0008, 0x0009, and 0x000A. ./html/storage.html Documentation describing storage schemes. ./src/Makefile.in ./test/Makefile.in New source files. ./src/H5A.c ./src/H5Apublic.h ./src/H5C.c Changed VOIDP to void* in a couple places. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Bprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h ./src/H5H.c ./src/H5O.c Removed `const' from some variables because H5G_node_found() wanted to modify it's udata argument. Removing const there caused it to cascade to these other locations. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5H.c ./src/H5O.c Added an extra argument to H5AC_find_f() and H5AC_protect(). This arg gets passed to the load() method. Also added an extra argument to the H5AC_find() macro. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra argument passed to the sizeof_rkey() method. ./src/H5Fprivate.c ./src/H5Fistore.c (new) Added indexed I/O operations. ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h Beginning to add H5G_open/close and related bug fixes. ./src/H5Oprivate.h ./src/H5Oistore.c (new) Added the H5O_ISTORE messsage (0x0008) for indexed storage of objects. ./src/H5private.h Added extra braces around both sides of the FUNC_ENTER() and FUNC_LEAVE() macros so FUNC_ENTER() can appear before declarations or after executable statements the second case is used by H5G_namei() to initialize output arguments to sane values before FUNC_ENTER() might return failure. int f () { int decl1; printf ("This happens before FUNC_ENTER()\n"); FUNC_ENTER (...); int another_declaration; ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra arguments for key encoding and decoding. ./src/H5E.c ./src/H5Epublic.h ./src/H5Fistore.c ./src/H5Oistore.c ./src/H5Oprivate.h Indexed, chunked, sparse storage (not ready for general consumption yet). ./src/H5V.c (new) ./src/H5Vprivate.h (new) ./test/hyperslab.c (new) Vector, array, and hyperslab functions. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Fistore.c ./src/H5Gnode.c ./src/H5V.c ./src/H5Vprivate.h ./test/hyperslab.c Added functionality for indexed storage. ./src/H5F.c Fixed problems with seek optimizing. Recommend we disable it until we can implement it in the file/address class since all of HDF5 must be aware of it. ./src/H5O.c Fixed comeent speling erorr :-) ./MANIFEST Added new files. ./config/conclude.in Added the word `Testing' to the test cases. So if a test program is called hyperslab then the make output will contain the line `Testing hyperslab'. ./config/linux The default file I/O library is Posix section 2 on my linux machine so I can do some I/O performance testing. ./src/H5C.c ./src/H5Cprivate.h ./src/H5Cpublic.h Added ability to set size of indexed-storage B-tree. ./src/H5D.c ./src/H5E.c ./src/H5Epublic.h ./src/H5F.c ./src/H5Fprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5Gshad.c ./src/H5Gstab.c ./test/stab.c Changed `directory' to `group' in numerous places. ./src/H5private.h The FILELIB constant can be set on the compile command-line. ./src/istore.c NEW Tests for indexed storage.
1997-10-21 07:14:35 +08:00
*
* Failure: FAIL
[svn-r129] Changes since 19970916 ---------------------- ./config/depend.in Fixed backslashes in sed script because the H5Gnode.c dependency info was disappearing. You'll have to rerun config.status to rebuild the Makefiles unless you use gnu make. ./config/conclude.in Also removes emacs backup files, TAGS, and svf backup files. ./config/linux Grouped gcc flags and added provisions for debugging vs. production. ./html/H5.format.html Updated messages 0x0008, 0x0009, and 0x000A. ./html/storage.html Documentation describing storage schemes. ./src/Makefile.in ./test/Makefile.in New source files. ./src/H5A.c ./src/H5Apublic.h ./src/H5C.c Changed VOIDP to void* in a couple places. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Bprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h ./src/H5H.c ./src/H5O.c Removed `const' from some variables because H5G_node_found() wanted to modify it's udata argument. Removing const there caused it to cascade to these other locations. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5H.c ./src/H5O.c Added an extra argument to H5AC_find_f() and H5AC_protect(). This arg gets passed to the load() method. Also added an extra argument to the H5AC_find() macro. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra argument passed to the sizeof_rkey() method. ./src/H5Fprivate.c ./src/H5Fistore.c (new) Added indexed I/O operations. ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h Beginning to add H5G_open/close and related bug fixes. ./src/H5Oprivate.h ./src/H5Oistore.c (new) Added the H5O_ISTORE messsage (0x0008) for indexed storage of objects. ./src/H5private.h Added extra braces around both sides of the FUNC_ENTER() and FUNC_LEAVE() macros so FUNC_ENTER() can appear before declarations or after executable statements the second case is used by H5G_namei() to initialize output arguments to sane values before FUNC_ENTER() might return failure. int f () { int decl1; printf ("This happens before FUNC_ENTER()\n"); FUNC_ENTER (...); int another_declaration; ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra arguments for key encoding and decoding. ./src/H5E.c ./src/H5Epublic.h ./src/H5Fistore.c ./src/H5Oistore.c ./src/H5Oprivate.h Indexed, chunked, sparse storage (not ready for general consumption yet). ./src/H5V.c (new) ./src/H5Vprivate.h (new) ./test/hyperslab.c (new) Vector, array, and hyperslab functions. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Fistore.c ./src/H5Gnode.c ./src/H5V.c ./src/H5Vprivate.h ./test/hyperslab.c Added functionality for indexed storage. ./src/H5F.c Fixed problems with seek optimizing. Recommend we disable it until we can implement it in the file/address class since all of HDF5 must be aware of it. ./src/H5O.c Fixed comeent speling erorr :-) ./MANIFEST Added new files. ./config/conclude.in Added the word `Testing' to the test cases. So if a test program is called hyperslab then the make output will contain the line `Testing hyperslab'. ./config/linux The default file I/O library is Posix section 2 on my linux machine so I can do some I/O performance testing. ./src/H5C.c ./src/H5Cprivate.h ./src/H5Cpublic.h Added ability to set size of indexed-storage B-tree. ./src/H5D.c ./src/H5E.c ./src/H5Epublic.h ./src/H5F.c ./src/H5Fprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5Gshad.c ./src/H5Gstab.c ./test/stab.c Changed `directory' to `group' in numerous places. ./src/H5private.h The FILELIB constant can be set on the compile command-line. ./src/istore.c NEW Tests for indexed storage.
1997-10-21 07:14:35 +08:00
*
* Programmer: Robb Matzke
* Wednesday, September 24, 1997
[svn-r129] Changes since 19970916 ---------------------- ./config/depend.in Fixed backslashes in sed script because the H5Gnode.c dependency info was disappearing. You'll have to rerun config.status to rebuild the Makefiles unless you use gnu make. ./config/conclude.in Also removes emacs backup files, TAGS, and svf backup files. ./config/linux Grouped gcc flags and added provisions for debugging vs. production. ./html/H5.format.html Updated messages 0x0008, 0x0009, and 0x000A. ./html/storage.html Documentation describing storage schemes. ./src/Makefile.in ./test/Makefile.in New source files. ./src/H5A.c ./src/H5Apublic.h ./src/H5C.c Changed VOIDP to void* in a couple places. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Bprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h ./src/H5H.c ./src/H5O.c Removed `const' from some variables because H5G_node_found() wanted to modify it's udata argument. Removing const there caused it to cascade to these other locations. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5H.c ./src/H5O.c Added an extra argument to H5AC_find_f() and H5AC_protect(). This arg gets passed to the load() method. Also added an extra argument to the H5AC_find() macro. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra argument passed to the sizeof_rkey() method. ./src/H5Fprivate.c ./src/H5Fistore.c (new) Added indexed I/O operations. ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h Beginning to add H5G_open/close and related bug fixes. ./src/H5Oprivate.h ./src/H5Oistore.c (new) Added the H5O_ISTORE messsage (0x0008) for indexed storage of objects. ./src/H5private.h Added extra braces around both sides of the FUNC_ENTER() and FUNC_LEAVE() macros so FUNC_ENTER() can appear before declarations or after executable statements the second case is used by H5G_namei() to initialize output arguments to sane values before FUNC_ENTER() might return failure. int f () { int decl1; printf ("This happens before FUNC_ENTER()\n"); FUNC_ENTER (...); int another_declaration; ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra arguments for key encoding and decoding. ./src/H5E.c ./src/H5Epublic.h ./src/H5Fistore.c ./src/H5Oistore.c ./src/H5Oprivate.h Indexed, chunked, sparse storage (not ready for general consumption yet). ./src/H5V.c (new) ./src/H5Vprivate.h (new) ./test/hyperslab.c (new) Vector, array, and hyperslab functions. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Fistore.c ./src/H5Gnode.c ./src/H5V.c ./src/H5Vprivate.h ./test/hyperslab.c Added functionality for indexed storage. ./src/H5F.c Fixed problems with seek optimizing. Recommend we disable it until we can implement it in the file/address class since all of HDF5 must be aware of it. ./src/H5O.c Fixed comeent speling erorr :-) ./MANIFEST Added new files. ./config/conclude.in Added the word `Testing' to the test cases. So if a test program is called hyperslab then the make output will contain the line `Testing hyperslab'. ./config/linux The default file I/O library is Posix section 2 on my linux machine so I can do some I/O performance testing. ./src/H5C.c ./src/H5Cprivate.h ./src/H5Cpublic.h Added ability to set size of indexed-storage B-tree. ./src/H5D.c ./src/H5E.c ./src/H5Epublic.h ./src/H5F.c ./src/H5Fprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5Gshad.c ./src/H5Gstab.c ./test/stab.c Changed `directory' to `group' in numerous places. ./src/H5private.h The FILELIB constant can be set on the compile command-line. ./src/istore.c NEW Tests for indexed storage.
1997-10-21 07:14:35 +08:00
*
*-------------------------------------------------------------------------
*/
hid_t
[svn-r620] Changes since 19980825 ---------------------- ./MANIFEST ./src/H5R.c [NEW] ./src/H5Rprivate.h [NEW] ./src/H5Rpublic.h [NEW] ./src/Makefile.in ./src/hdf5.h ./test/ragged.c [NEW] Preliminary support for 2d ragged arrays for Mark Miller and Jim Reus. Not fully implemented yet. The test is not actually part of `make test' because we still have some memory problems. ./src/H5E.c ./src/H5Epublic.h Added H5E_RAGGED as a major error number. ./bin/release Checks the MANIFEST file against `svf ls' on systems that have it. ./bin/trace Fixed a bug that caused arguments of type `void *x[]' to not be handled. ./src/H5.c Removed unused variables and changed a couple types to fix compiler warnings. Added tracing support for ragged array object ID's and arrays of pointers. ./src/H5D.c H5Dcreate() will complain if either of the property lists are invalid (instead of using the default). ./src/H5D.c ./src/H5Dprivate.h Split H5Dget_space() into an API and internal function so it can be called from the new ragged array layer. ./src/H5Fistore.c Fixed warnings about unsigned vs. signed comparisons. ./src/H5Flow.c Fixed a warning about a variable being shadowed in the MPI-IO stuff. ./src/H5Iprivate.h ./src/H5Ipublic.h Added the H5_RAGGED atom group. ./src/H5Shyper.c Fixed some freeing-free-memory errors that resulted when certain arrays were freed but the pointers were left in the data structures. I simply set the pointers to null after they were freed. ./src/H5Sprivate.h ./src/H5Sselect.c Split the H5Sselect_hyperslab() function into an API and a private function so it could be called from the ragged array layer. Added H5S_SEL_ERROR and H5S_SEL_N to the switch statements to get rid or compiler warnings. ./src/H5Tconv.c Removed a misleading comment. ./test/bittests.c Fixed a warning about a printf(). ./test/cmpd_dset.c Fixed warnings about unused variables because of test #11 being commented out. ./bin/trace Shortened the right margin for the output to allow room for the `);' at the end of the TRACE() macros.
1998-08-28 00:48:50 +08:00
H5Gcreate(hid_t loc_id, const char *name, size_t size_hint)
[svn-r129] Changes since 19970916 ---------------------- ./config/depend.in Fixed backslashes in sed script because the H5Gnode.c dependency info was disappearing. You'll have to rerun config.status to rebuild the Makefiles unless you use gnu make. ./config/conclude.in Also removes emacs backup files, TAGS, and svf backup files. ./config/linux Grouped gcc flags and added provisions for debugging vs. production. ./html/H5.format.html Updated messages 0x0008, 0x0009, and 0x000A. ./html/storage.html Documentation describing storage schemes. ./src/Makefile.in ./test/Makefile.in New source files. ./src/H5A.c ./src/H5Apublic.h ./src/H5C.c Changed VOIDP to void* in a couple places. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Bprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h ./src/H5H.c ./src/H5O.c Removed `const' from some variables because H5G_node_found() wanted to modify it's udata argument. Removing const there caused it to cascade to these other locations. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5H.c ./src/H5O.c Added an extra argument to H5AC_find_f() and H5AC_protect(). This arg gets passed to the load() method. Also added an extra argument to the H5AC_find() macro. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra argument passed to the sizeof_rkey() method. ./src/H5Fprivate.c ./src/H5Fistore.c (new) Added indexed I/O operations. ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h Beginning to add H5G_open/close and related bug fixes. ./src/H5Oprivate.h ./src/H5Oistore.c (new) Added the H5O_ISTORE messsage (0x0008) for indexed storage of objects. ./src/H5private.h Added extra braces around both sides of the FUNC_ENTER() and FUNC_LEAVE() macros so FUNC_ENTER() can appear before declarations or after executable statements the second case is used by H5G_namei() to initialize output arguments to sane values before FUNC_ENTER() might return failure. int f () { int decl1; printf ("This happens before FUNC_ENTER()\n"); FUNC_ENTER (...); int another_declaration; ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra arguments for key encoding and decoding. ./src/H5E.c ./src/H5Epublic.h ./src/H5Fistore.c ./src/H5Oistore.c ./src/H5Oprivate.h Indexed, chunked, sparse storage (not ready for general consumption yet). ./src/H5V.c (new) ./src/H5Vprivate.h (new) ./test/hyperslab.c (new) Vector, array, and hyperslab functions. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Fistore.c ./src/H5Gnode.c ./src/H5V.c ./src/H5Vprivate.h ./test/hyperslab.c Added functionality for indexed storage. ./src/H5F.c Fixed problems with seek optimizing. Recommend we disable it until we can implement it in the file/address class since all of HDF5 must be aware of it. ./src/H5O.c Fixed comeent speling erorr :-) ./MANIFEST Added new files. ./config/conclude.in Added the word `Testing' to the test cases. So if a test program is called hyperslab then the make output will contain the line `Testing hyperslab'. ./config/linux The default file I/O library is Posix section 2 on my linux machine so I can do some I/O performance testing. ./src/H5C.c ./src/H5Cprivate.h ./src/H5Cpublic.h Added ability to set size of indexed-storage B-tree. ./src/H5D.c ./src/H5E.c ./src/H5Epublic.h ./src/H5F.c ./src/H5Fprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5Gshad.c ./src/H5Gstab.c ./test/stab.c Changed `directory' to `group' in numerous places. ./src/H5private.h The FILELIB constant can be set on the compile command-line. ./src/istore.c NEW Tests for indexed storage.
1997-10-21 07:14:35 +08:00
{
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H5G_loc_t loc;
H5G_t *grp = NULL;
hid_t tmp_gcpl = (-1); /* Temporary group creation property list */
hid_t ret_value;
2005-11-15 10:55:39 +08:00
FUNC_ENTER_API(H5Gcreate, FAIL)
[svn-r429] Changes since 19980616 ---------------------- ./html/tracing.html NEW This entire update is to make it possible for the library to print the name, arguments, and return value of every API call without requiring any extra work from developers or app programmers. This file describes how this all works. ./configure.in Added the `--enable-tracing' switch. If you use it then the library will include code to print API function names, argument names and values, and function return values. However, you must then turn on the tracing by setting the HDF5_TRACE environment variable to a file descriptor number. The default is `--disable-tracing' since enabling it causes a slight increase in library size and a slowdown resulting from an extra function call for each API function call (I couldn't even measure the slowdown :-) ./bin/trace NEW A perl script that synchronizes the H5TRACE() macro calls in the *.c files with the function return type and formal argument names and types. If you use GNU make and gcc then this will be done automatically, otherwise just invoke this script with the names of one or more .c files. You could do it by hand to, but encoding argument types is a little tricky at first. ./config/commence.in Added the $(TRACE) macro, which defaults to the no-op. Added -D_POSIX_SOURCE to the compiler command line. ./src/Makefile.in Override the default for $(TRACE). ./config/depend.in Automatically calls $(TRACE) to synchronize the H5TRACE() macros in any source file that changed. As with makefile dependencies, one way to force synchronization of all files is to remove the `.depend' file. ./MANIFEST Added new files. ./src/H5Eprivate.h Modified HRETURN_ERROR() and HRETURN() for tracing. ./src/H5.c ./src/H5private.h This is where the real tracing work really happens, in H5_trace(). ./src/H5A.c ./src/H5D.c ./src/H5G.c ./src/H5P.c ./src/H5S.c ./src/H5Z.c Added H5TRACE() calls to all API functions. You don't really need these changes if you don't want to merge your stuff because they can be generated automatically by going to the hdf5/src directory and saying ../bin/trace *.c ./src/H5T.c Added H5TRACE() calls. Other stuff below. ./src/H5E.c ./src/H5Epublic.h Added H5TRACE() calls. Created a type H5E_auto_t for the `func' argument of H5Eset_auto() and H5Eget_auto() to make those arguments easier to parse for tracing. It should also make it clearer for users that don't know how to read complicated ANSI data types. ./src/H5F.c Added H5TRACE() calls. Changed a couple `uintn' argument types in API functions to `unsigned int' since `uintn' part of the API. Changed a few "can't" and "cant" error messages to "unable to". ./src/H5Ipublic.h Removed H5_DIRECTORY from the H5I_group_t enum. It wasn't used anywhere. ./src/H5Tconv.c Removed an unused label. ./src/H5Fistore.c ./src/H5Oattr.c ./src/H5Odtype.c ./src/H5T.c ./test/dsets.c ./test/dtypes.c Fixed a warning about a variable possibly used before it's initialized. Added __unused__ to turn off some unused argument warnings that pop up when debugging is turned off and optimizations are turned on.
1998-06-18 04:46:29 +08:00
H5TRACE3("i","isz",loc_id,name,size_hint);
/* Check arguments */
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if(H5G_loc(loc_id, &loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location")
if(!name || !*name)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no name given")
/* Check if we need to create a non-standard GCPL */
if(size_hint > 0) {
H5P_genplist_t *gc_plist; /* Property list created */
H5O_ginfo_t ginfo; /* Group info property */
/* Get the default property list */
if(NULL == (gc_plist = H5I_object(H5P_GROUP_CREATE_DEFAULT)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a property list")
/* Make a copy of the default property list */
if((tmp_gcpl = H5P_copy_plist(gc_plist)) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTGET, FAIL, "unable to copy the creation property list")
/* Get the copy of the property list */
if(NULL == (gc_plist = H5I_object(H5P_GROUP_CREATE_DEFAULT)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a property list")
/* Get the group info property */
if(H5P_get(gc_plist, H5G_CRT_GROUP_INFO_NAME, &ginfo) < 0)
HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get group info")
/* Set the non-default local heap size hint */
ginfo.lheap_size_hint = size_hint;
if(H5P_set(gc_plist, H5G_CRT_GROUP_INFO_NAME, &ginfo) < 0)
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HGOTO_ERROR(H5E_PLIST, H5E_CANTSET, FAIL, "can't set group info")
} /* end if */
else
tmp_gcpl = H5P_GROUP_CREATE_DEFAULT;
/* Create the group */
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if(NULL == (grp = H5G_create(&loc, name, H5AC_dxpl_id, tmp_gcpl, H5P_DEFAULT)))
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to create group")
if((ret_value = H5I_register(H5I_GROUP, grp)) < 0)
HGOTO_ERROR(H5E_ATOM, H5E_CANTREGISTER, FAIL, "unable to register group")
done:
if(tmp_gcpl > 0 && tmp_gcpl != H5P_GROUP_CREATE_DEFAULT)
if(H5I_dec_ref(tmp_gcpl) < 0)
HDONE_ERROR(H5E_SYM, H5E_CLOSEERROR, FAIL, "unable to release property list")
if(ret_value < 0) {
if(grp!=NULL)
H5G_close(grp);
} /* end if */
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FUNC_LEAVE_API(ret_value)
} /* end H5Gcreate() */
/*-------------------------------------------------------------------------
* Function: H5Gcreate_expand
*
* Purpose: Creates a new group relative to LOC_ID and gives it the
* specified NAME, and creation property list GCPL_ID and access
* property list GAPL_ID.
*
* The optional SIZE_HINT specifies how much file space to
* reserve to store the names that will appear in this
* group. If a non-positive value is supplied for the SIZE_HINT
* then a default size is chosen.
*
* Given the default setting, H5Gcreate_expand() will have the
* same function of H5Gcreate()
*
* See also: H5Gcreate(), H5Dcreate_expand()
*
* Errors:
*
* Return: Success: The object ID of a new, empty group open for
* writing. Call H5Gclose() when finished with
* the group.
*
* Failure: FAIL
*
* Programmer: Peter Cao
* May 08, 2005
*-------------------------------------------------------------------------
*/
hid_t
H5Gcreate_expand(hid_t loc_id, const char *name, hid_t gcpl_id, hid_t gapl_id)
{
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H5G_loc_t loc;
H5G_t *grp = NULL;
hid_t ret_value;
FUNC_ENTER_API(H5Gcreate_expand, FAIL)
H5TRACE4("i","isii",loc_id,name,gcpl_id,gapl_id);
/* Check arguments */
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if(H5G_loc(loc_id, &loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location")
if(!name || !*name)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no name given")
/* Check group creation property list */
if(H5P_DEFAULT == gcpl_id)
gcpl_id = H5P_GROUP_CREATE_DEFAULT;
else
if(TRUE != H5P_isa_class(gcpl_id, H5P_GROUP_CREATE))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not group create property list")
#ifdef LATER
/* Check the group access property list */
if(H5P_DEFAULT == gapl_id)
gapl_id = H5P_GROUP_ACCESS_DEFAULT;
else
if(TRUE != H5P_isa_class(gapl_id, H5P_GROUP_ACCESS))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not group access property list")
#endif /* LATER */
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if(NULL == (grp = H5G_create(&loc, name, H5AC_dxpl_id, gcpl_id, gapl_id)))
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to create group")
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if((ret_value = H5I_register(H5I_GROUP, grp)) < 0)
HGOTO_ERROR(H5E_ATOM, H5E_CANTREGISTER, FAIL, "unable to register group")
done:
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if(ret_value < 0) {
if(grp!=NULL)
H5G_close(grp);
} /* end if */
FUNC_LEAVE_API(ret_value)
} /* end H5Gcreate_expand() */
/*-------------------------------------------------------------------------
* Function: H5Gopen
*
* Purpose: Opens an existing group for modification. When finished,
* call H5Gclose() to close it and release resources.
*
* Errors:
*
* Return: Success: Object ID of the group.
*
* Failure: FAIL
*
* Programmer: Robb Matzke
* Wednesday, December 31, 1997
*
*-------------------------------------------------------------------------
*/
hid_t
[svn-r620] Changes since 19980825 ---------------------- ./MANIFEST ./src/H5R.c [NEW] ./src/H5Rprivate.h [NEW] ./src/H5Rpublic.h [NEW] ./src/Makefile.in ./src/hdf5.h ./test/ragged.c [NEW] Preliminary support for 2d ragged arrays for Mark Miller and Jim Reus. Not fully implemented yet. The test is not actually part of `make test' because we still have some memory problems. ./src/H5E.c ./src/H5Epublic.h Added H5E_RAGGED as a major error number. ./bin/release Checks the MANIFEST file against `svf ls' on systems that have it. ./bin/trace Fixed a bug that caused arguments of type `void *x[]' to not be handled. ./src/H5.c Removed unused variables and changed a couple types to fix compiler warnings. Added tracing support for ragged array object ID's and arrays of pointers. ./src/H5D.c H5Dcreate() will complain if either of the property lists are invalid (instead of using the default). ./src/H5D.c ./src/H5Dprivate.h Split H5Dget_space() into an API and internal function so it can be called from the new ragged array layer. ./src/H5Fistore.c Fixed warnings about unsigned vs. signed comparisons. ./src/H5Flow.c Fixed a warning about a variable being shadowed in the MPI-IO stuff. ./src/H5Iprivate.h ./src/H5Ipublic.h Added the H5_RAGGED atom group. ./src/H5Shyper.c Fixed some freeing-free-memory errors that resulted when certain arrays were freed but the pointers were left in the data structures. I simply set the pointers to null after they were freed. ./src/H5Sprivate.h ./src/H5Sselect.c Split the H5Sselect_hyperslab() function into an API and a private function so it could be called from the ragged array layer. Added H5S_SEL_ERROR and H5S_SEL_N to the switch statements to get rid or compiler warnings. ./src/H5Tconv.c Removed a misleading comment. ./test/bittests.c Fixed a warning about a printf(). ./test/cmpd_dset.c Fixed warnings about unused variables because of test #11 being commented out. ./bin/trace Shortened the right margin for the output to allow room for the `);' at the end of the TRACE() macros.
1998-08-28 00:48:50 +08:00
H5Gopen(hid_t loc_id, const char *name)
{
H5G_t *grp = NULL;
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H5G_loc_t loc;
H5G_loc_t grp_loc; /* Location used to open group */
H5G_name_t grp_path; /* Opened object group hier. path */
H5O_loc_t grp_oloc; /* Opened object object location */
hbool_t ent_found = FALSE; /* Entry at 'name' found */
hid_t ret_value = FAIL;
2005-11-15 10:55:39 +08:00
FUNC_ENTER_API(H5Gopen, FAIL)
[svn-r429] Changes since 19980616 ---------------------- ./html/tracing.html NEW This entire update is to make it possible for the library to print the name, arguments, and return value of every API call without requiring any extra work from developers or app programmers. This file describes how this all works. ./configure.in Added the `--enable-tracing' switch. If you use it then the library will include code to print API function names, argument names and values, and function return values. However, you must then turn on the tracing by setting the HDF5_TRACE environment variable to a file descriptor number. The default is `--disable-tracing' since enabling it causes a slight increase in library size and a slowdown resulting from an extra function call for each API function call (I couldn't even measure the slowdown :-) ./bin/trace NEW A perl script that synchronizes the H5TRACE() macro calls in the *.c files with the function return type and formal argument names and types. If you use GNU make and gcc then this will be done automatically, otherwise just invoke this script with the names of one or more .c files. You could do it by hand to, but encoding argument types is a little tricky at first. ./config/commence.in Added the $(TRACE) macro, which defaults to the no-op. Added -D_POSIX_SOURCE to the compiler command line. ./src/Makefile.in Override the default for $(TRACE). ./config/depend.in Automatically calls $(TRACE) to synchronize the H5TRACE() macros in any source file that changed. As with makefile dependencies, one way to force synchronization of all files is to remove the `.depend' file. ./MANIFEST Added new files. ./src/H5Eprivate.h Modified HRETURN_ERROR() and HRETURN() for tracing. ./src/H5.c ./src/H5private.h This is where the real tracing work really happens, in H5_trace(). ./src/H5A.c ./src/H5D.c ./src/H5G.c ./src/H5P.c ./src/H5S.c ./src/H5Z.c Added H5TRACE() calls to all API functions. You don't really need these changes if you don't want to merge your stuff because they can be generated automatically by going to the hdf5/src directory and saying ../bin/trace *.c ./src/H5T.c Added H5TRACE() calls. Other stuff below. ./src/H5E.c ./src/H5Epublic.h Added H5TRACE() calls. Created a type H5E_auto_t for the `func' argument of H5Eset_auto() and H5Eget_auto() to make those arguments easier to parse for tracing. It should also make it clearer for users that don't know how to read complicated ANSI data types. ./src/H5F.c Added H5TRACE() calls. Changed a couple `uintn' argument types in API functions to `unsigned int' since `uintn' part of the API. Changed a few "can't" and "cant" error messages to "unable to". ./src/H5Ipublic.h Removed H5_DIRECTORY from the H5I_group_t enum. It wasn't used anywhere. ./src/H5Tconv.c Removed an unused label. ./src/H5Fistore.c ./src/H5Oattr.c ./src/H5Odtype.c ./src/H5T.c ./test/dsets.c ./test/dtypes.c Fixed a warning about a variable possibly used before it's initialized. Added __unused__ to turn off some unused argument warnings that pop up when debugging is turned off and optimizations are turned on.
1998-06-18 04:46:29 +08:00
H5TRACE2("i","is",loc_id,name);
/* Check args */
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if(H5G_loc(loc_id, &loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location")
if(!name || !*name)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no name")
/* Set up opened group location to fill in */
grp_loc.oloc = &grp_oloc;
grp_loc.path = &grp_path;
H5G_loc_reset(&grp_loc);
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/* Find the group object */
if(H5G_loc_find(&loc, name, &grp_loc/*out*/, H5AC_dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "group not found")
ent_found = TRUE;
/* Check that the object found is the correct type */
if(H5O_obj_type(&grp_oloc, H5AC_dxpl_id) != H5G_GROUP)
HGOTO_ERROR(H5E_SYM, H5E_BADTYPE, FAIL, "not a group")
/* Open the group */
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if((grp = H5G_open(&grp_loc, H5AC_dxpl_id)) == NULL)
HGOTO_ERROR(H5E_SYM, H5E_CANTOPENOBJ, FAIL, "unable to open group")
/* Register an atom for the group */
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if((ret_value = H5I_register(H5I_GROUP, grp)) < 0)
HGOTO_ERROR(H5E_ATOM, H5E_CANTREGISTER, FAIL, "unable to register group")
done:
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if(ret_value < 0) {
if(grp != NULL)
H5G_close(grp);
2005-11-15 10:55:39 +08:00
else {
if(ent_found)
H5G_name_free(&grp_path);
} /* end else */
} /* end if */
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FUNC_LEAVE_API(ret_value)
} /* H5Gopen() */
/*-------------------------------------------------------------------------
* Function: H5Gclose
*
* Purpose: Closes the specified group. The group ID will no longer be
* valid for accessing the group.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Wednesday, December 31, 1997
*
*-------------------------------------------------------------------------
*/
herr_t
[svn-r620] Changes since 19980825 ---------------------- ./MANIFEST ./src/H5R.c [NEW] ./src/H5Rprivate.h [NEW] ./src/H5Rpublic.h [NEW] ./src/Makefile.in ./src/hdf5.h ./test/ragged.c [NEW] Preliminary support for 2d ragged arrays for Mark Miller and Jim Reus. Not fully implemented yet. The test is not actually part of `make test' because we still have some memory problems. ./src/H5E.c ./src/H5Epublic.h Added H5E_RAGGED as a major error number. ./bin/release Checks the MANIFEST file against `svf ls' on systems that have it. ./bin/trace Fixed a bug that caused arguments of type `void *x[]' to not be handled. ./src/H5.c Removed unused variables and changed a couple types to fix compiler warnings. Added tracing support for ragged array object ID's and arrays of pointers. ./src/H5D.c H5Dcreate() will complain if either of the property lists are invalid (instead of using the default). ./src/H5D.c ./src/H5Dprivate.h Split H5Dget_space() into an API and internal function so it can be called from the new ragged array layer. ./src/H5Fistore.c Fixed warnings about unsigned vs. signed comparisons. ./src/H5Flow.c Fixed a warning about a variable being shadowed in the MPI-IO stuff. ./src/H5Iprivate.h ./src/H5Ipublic.h Added the H5_RAGGED atom group. ./src/H5Shyper.c Fixed some freeing-free-memory errors that resulted when certain arrays were freed but the pointers were left in the data structures. I simply set the pointers to null after they were freed. ./src/H5Sprivate.h ./src/H5Sselect.c Split the H5Sselect_hyperslab() function into an API and a private function so it could be called from the ragged array layer. Added H5S_SEL_ERROR and H5S_SEL_N to the switch statements to get rid or compiler warnings. ./src/H5Tconv.c Removed a misleading comment. ./test/bittests.c Fixed a warning about a printf(). ./test/cmpd_dset.c Fixed warnings about unused variables because of test #11 being commented out. ./bin/trace Shortened the right margin for the output to allow room for the `);' at the end of the TRACE() macros.
1998-08-28 00:48:50 +08:00
H5Gclose(hid_t group_id)
{
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_API(H5Gclose, FAIL);
H5TRACE1("e","i",group_id);
/* Check args */
if (NULL == H5I_object_verify(group_id,H5I_GROUP))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a group");
/*
* Decrement the counter on the group atom. It will be freed if the count
* reaches zero.
*/
if (H5I_dec_ref(group_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to close group");
done:
FUNC_LEAVE_API(ret_value);
}
/*-------------------------------------------------------------------------
* Function: H5Giterate
*
* Purpose: Iterates over the entries of a group. The LOC_ID and NAME
* identify the group over which to iterate and IDX indicates
* where to start iterating (zero means at the beginning). The
* OPERATOR is called for each member and the iteration
* continues until the operator returns non-zero or all members
* are processed. The operator is passed a group ID for the
* group being iterated, a member name, and OP_DATA for each
* member.
*
* Return: Success: The return value of the first operator that
* returns non-zero, or zero if all members were
* processed with no operator returning non-zero.
*
* Failure: Negative if something goes wrong within the
* library, or the negative value returned by one
* of the operators.
*
* Programmer: Robb Matzke
* Monday, March 23, 1998
*
*-------------------------------------------------------------------------
*/
herr_t
H5Giterate(hid_t loc_id, const char *name, int *idx_p,
H5G_iterate_t op, void *op_data)
{
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int last_obj; /* Index of last object looked at */
int idx; /* Internal location to hold index */
herr_t ret_value;
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FUNC_ENTER_API(H5Giterate, FAIL)
H5TRACE5("e","is*Isxx",loc_id,name,idx_p,op,op_data);
/* Check args */
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if(!name || !*name)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no name specified")
idx = (idx_p == NULL ? 0 : *idx_p);
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if(idx < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid index specified")
if(!op)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no operator specified")
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/* Set number of objects looked at to zero */
last_obj = 0;
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/* Call private function. */
if((ret_value = H5G_obj_iterate(loc_id, name, idx, &last_obj, op, op_data, H5AC_ind_dxpl_id)) < 0)
HGOTO_ERROR(H5E_SYM, H5E_BADITER, FAIL, "group iteration failed")
/* Check for too high of a starting index (ex post facto :-) */
/* (Skipping exactly as many entries as are in the group is currently an error) */
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if(idx > 0 && idx >= last_obj)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid index specified")
/* Set the index we stopped at */
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if(idx_p)
*idx_p=last_obj;
done:
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FUNC_LEAVE_API(ret_value)
} /* end H5Giterate() */
/*-------------------------------------------------------------------------
* Function: H5Gget_num_objs
*
* Purpose: Returns the number of objects in the group. It iterates
* all B-tree leaves and sum up total number of group members.
*
* Return: Success: Non-negative
*
* Failure: Negative
*
* Programmer: Raymond Lu
* Nov 20, 2002
*
*-------------------------------------------------------------------------
*/
herr_t
H5Gget_num_objs(hid_t loc_id, hsize_t *num_objs)
{
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H5G_loc_t loc; /* Location of object */
herr_t ret_value;
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FUNC_ENTER_API(H5Gget_num_objs, FAIL)
H5TRACE2("e","i*h",loc_id,num_objs);
/* Check args */
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if(H5G_loc(loc_id, &loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location ID")
if(H5O_obj_type(loc.oloc, H5AC_ind_dxpl_id) != H5G_GROUP)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a group")
if(!num_objs)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "nil pointer")
/* Call private function. */
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if((ret_value = H5G_obj_count(loc.oloc, num_objs, H5AC_ind_dxpl_id)) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTCOUNT, FAIL, "can't determine ")
done:
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FUNC_LEAVE_API(ret_value)
} /* end H5Gget_num_objs() */
/*-------------------------------------------------------------------------
* Function: H5Gget_objname_by_idx
*
* Purpose: Returns the name of objects in the group by giving index.
* If `name' is non-NULL then write up to `size' bytes into that
* buffer and always return the length of the entry name.
* Otherwise `size' is ignored and the function does not store the name,
* just returning the number of characters required to store the name.
* If an error occurs then the buffer pointed to by `name' (NULL or non-NULL)
* is unchanged and the function returns a negative value.
* If a zero is returned for the name's length, then there is no name
* associated with the ID.
*
* Return: Success: Non-negative
*
* Failure: Negative
*
* Programmer: Raymond Lu
* Nov 20, 2002
*
*-------------------------------------------------------------------------
*/
ssize_t
H5Gget_objname_by_idx(hid_t loc_id, hsize_t idx, char *name, size_t size)
{
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H5G_loc_t loc; /* Object location */
ssize_t ret_value;
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FUNC_ENTER_API(H5Gget_objname_by_idx, FAIL)
H5TRACE4("Zs","ihsz",loc_id,idx,name,size);
/* Check args */
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if(H5G_loc(loc_id, &loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location ID")
if(H5O_obj_type(loc.oloc, H5AC_ind_dxpl_id) != H5G_GROUP)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a group")
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/* Call internal function*/
if((ret_value = H5G_obj_get_name_by_idx(loc.oloc, idx, name, size, H5AC_ind_dxpl_id)) < 0)
HGOTO_ERROR(H5E_SYM, H5E_BADTYPE, FAIL, "can't get object name")
done:
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FUNC_LEAVE_API(ret_value)
} /* end H5Gget_objname_by_idx() */
/*-------------------------------------------------------------------------
* Function: H5Gget_objtype_by_idx
*
* Purpose: Returns the type of objects in the group by giving index.
*
*
* Return: Success: H5G_GROUP(1), H5G_DATASET(2), H5G_TYPE(3)
*
* Failure: H5G_UNKNOWN
*
* Programmer: Raymond Lu
* Nov 20, 2002
*
*-------------------------------------------------------------------------
*/
H5G_obj_t
H5Gget_objtype_by_idx(hid_t loc_id, hsize_t idx)
{
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H5G_loc_t loc; /* Object location */
H5G_obj_t ret_value;
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FUNC_ENTER_API(H5Gget_objtype_by_idx, H5G_UNKNOWN)
H5TRACE2("Go","ih",loc_id,idx);
/* Check args */
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if(H5G_loc(loc_id, &loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, H5G_UNKNOWN, "not a location ID")
if(H5O_obj_type(loc.oloc, H5AC_ind_dxpl_id) != H5G_GROUP)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, H5G_UNKNOWN, "not a group")
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/* Call internal function*/
if((ret_value = H5G_obj_get_type_by_idx(loc.oloc, idx, H5AC_ind_dxpl_id)) == H5G_UNKNOWN)
HGOTO_ERROR(H5E_SYM, H5E_BADTYPE, FAIL, "can't get object type")
done:
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FUNC_LEAVE_API(ret_value)
} /* end H5Gget_objtype_by_idx() */
/*-------------------------------------------------------------------------
* Function: H5Gmove2
*
* Purpose: Renames an object within an HDF5 file. The original name SRC
* is unlinked from the group graph and the new name DST is
* inserted as an atomic operation. Both names are interpreted
* relative to SRC_LOC_ID and DST_LOC_ID, which are either a file
* ID or a group ID.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Monday, April 6, 1998
*
*-------------------------------------------------------------------------
*/
herr_t
H5Gmove2(hid_t src_loc_id, const char *src_name, hid_t dst_loc_id,
const char *dst_name)
{
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H5G_loc_t src_loc, *src_loc_p;
H5G_loc_t dst_loc, *dst_loc_p;
herr_t ret_value=SUCCEED; /* Return value */
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FUNC_ENTER_API(H5Gmove2, FAIL)
H5TRACE4("e","isis",src_loc_id,src_name,dst_loc_id,dst_name);
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if(src_loc_id != H5G_SAME_LOC && H5G_loc(src_loc_id, &src_loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location")
if(dst_loc_id != H5G_SAME_LOC && H5G_loc(dst_loc_id, &dst_loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location")
if(!src_name || !*src_name)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no current name specified")
if(!dst_name || !*dst_name)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no new name specified")
/* Set up src & dst location pointers */
src_loc_p = &src_loc;
dst_loc_p = &dst_loc;
if(src_loc_id == H5G_SAME_LOC && dst_loc_id == H5G_SAME_LOC)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "source and destination should not be both H5G_SAME_LOC")
else if(src_loc_id == H5G_SAME_LOC)
src_loc_p = dst_loc_p;
else if(dst_loc_id == H5G_SAME_LOC)
dst_loc_p = src_loc_p;
else if(src_loc_p->oloc->file != dst_loc_p->oloc->file)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "source and destination should be in the same file.")
if(H5G_move(src_loc_p, src_name, dst_loc_p, dst_name, H5AC_dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to change object name")
done:
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FUNC_LEAVE_API(ret_value)
} /* end H5Gmove2() */
/*-------------------------------------------------------------------------
* Function: H5Glink2
*
* Purpose: Creates a link of the specified type from NEW_NAME to
* CUR_NAME.
*
* If TYPE is H5G_LINK_HARD then CUR_NAME must name an existing
* object. CUR_NAME and NEW_NAME are interpreted relative to
* CUR_LOC_ID and NEW_LOC_ID, which is either a file ID or a
* group ID.
*
* If TYPE is H5G_LINK_SOFT then CUR_NAME can be anything and is
* interpreted at lookup time relative to the group which
* contains the final component of NEW_NAME. For instance, if
* CUR_NAME is `./foo' and NEW_NAME is `./x/y/bar' and a request
* is made for `./x/y/bar' then the actual object looked up is
* `./x/y/./foo'.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Monday, April 6, 1998
*
*-------------------------------------------------------------------------
*/
herr_t
H5Glink2(hid_t cur_loc_id, const char *cur_name, H5G_link_t type,
hid_t new_loc_id, const char *new_name)
{
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H5G_loc_t cur_loc, *cur_loc_p;
H5G_loc_t new_loc, *new_loc_p;
herr_t ret_value=SUCCEED; /* Return value */
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FUNC_ENTER_API(H5Glink2, FAIL)
H5TRACE5("e","isGlis",cur_loc_id,cur_name,type,new_loc_id,new_name);
/* Check arguments */
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if(cur_loc_id != H5G_SAME_LOC && H5G_loc(cur_loc_id, &cur_loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location")
if(new_loc_id != H5G_SAME_LOC && H5G_loc(new_loc_id, &new_loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location")
if(type != H5G_LINK_HARD && type != H5G_LINK_SOFT)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "unrecognized link type")
if(!cur_name || !*cur_name)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no current name specified")
if(!new_name || !*new_name)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no new name specified")
/* Set up current & new location pointers */
cur_loc_p = &cur_loc;
new_loc_p = &new_loc;
if(cur_loc_id == H5G_SAME_LOC && new_loc_id == H5G_SAME_LOC)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "source and destination should not be both H5G_SAME_LOC")
else if(cur_loc_id == H5G_SAME_LOC)
cur_loc_p = new_loc_p;
else if(new_loc_id == H5G_SAME_LOC)
new_loc_p = cur_loc_p;
else if(cur_loc_p->oloc->file != new_loc_p->oloc->file)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "source and destination should be in the same file.")
if(H5G_link(cur_loc_p, cur_name, new_loc_p, new_name, type, H5G_TARGET_NORMAL, H5AC_dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_LINK, FAIL, "unable to create link")
done:
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FUNC_LEAVE_API(ret_value)
} /* end H5Glink2() */
/*-------------------------------------------------------------------------
* Function: H5Gunlink
*
* Purpose: Removes the specified NAME from the group graph and
* decrements the link count for the object to which NAME
* points. If the link count reaches zero then all file-space
* associated with the object will be reclaimed (but if the
* object is open, then the reclamation of the file space is
* delayed until all handles to the object are closed).
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Monday, April 6, 1998
*
*-------------------------------------------------------------------------
*/
herr_t
H5Gunlink(hid_t loc_id, const char *name)
{
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H5G_loc_t loc;
herr_t ret_value=SUCCEED; /* Return value */
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FUNC_ENTER_API(H5Gunlink, FAIL)
[svn-r429] Changes since 19980616 ---------------------- ./html/tracing.html NEW This entire update is to make it possible for the library to print the name, arguments, and return value of every API call without requiring any extra work from developers or app programmers. This file describes how this all works. ./configure.in Added the `--enable-tracing' switch. If you use it then the library will include code to print API function names, argument names and values, and function return values. However, you must then turn on the tracing by setting the HDF5_TRACE environment variable to a file descriptor number. The default is `--disable-tracing' since enabling it causes a slight increase in library size and a slowdown resulting from an extra function call for each API function call (I couldn't even measure the slowdown :-) ./bin/trace NEW A perl script that synchronizes the H5TRACE() macro calls in the *.c files with the function return type and formal argument names and types. If you use GNU make and gcc then this will be done automatically, otherwise just invoke this script with the names of one or more .c files. You could do it by hand to, but encoding argument types is a little tricky at first. ./config/commence.in Added the $(TRACE) macro, which defaults to the no-op. Added -D_POSIX_SOURCE to the compiler command line. ./src/Makefile.in Override the default for $(TRACE). ./config/depend.in Automatically calls $(TRACE) to synchronize the H5TRACE() macros in any source file that changed. As with makefile dependencies, one way to force synchronization of all files is to remove the `.depend' file. ./MANIFEST Added new files. ./src/H5Eprivate.h Modified HRETURN_ERROR() and HRETURN() for tracing. ./src/H5.c ./src/H5private.h This is where the real tracing work really happens, in H5_trace(). ./src/H5A.c ./src/H5D.c ./src/H5G.c ./src/H5P.c ./src/H5S.c ./src/H5Z.c Added H5TRACE() calls to all API functions. You don't really need these changes if you don't want to merge your stuff because they can be generated automatically by going to the hdf5/src directory and saying ../bin/trace *.c ./src/H5T.c Added H5TRACE() calls. Other stuff below. ./src/H5E.c ./src/H5Epublic.h Added H5TRACE() calls. Created a type H5E_auto_t for the `func' argument of H5Eset_auto() and H5Eget_auto() to make those arguments easier to parse for tracing. It should also make it clearer for users that don't know how to read complicated ANSI data types. ./src/H5F.c Added H5TRACE() calls. Changed a couple `uintn' argument types in API functions to `unsigned int' since `uintn' part of the API. Changed a few "can't" and "cant" error messages to "unable to". ./src/H5Ipublic.h Removed H5_DIRECTORY from the H5I_group_t enum. It wasn't used anywhere. ./src/H5Tconv.c Removed an unused label. ./src/H5Fistore.c ./src/H5Oattr.c ./src/H5Odtype.c ./src/H5T.c ./test/dsets.c ./test/dtypes.c Fixed a warning about a variable possibly used before it's initialized. Added __unused__ to turn off some unused argument warnings that pop up when debugging is turned off and optimizations are turned on.
1998-06-18 04:46:29 +08:00
H5TRACE2("e","is",loc_id,name);
/* Check arguments */
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if(H5G_loc(loc_id, &loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location")
if(!name || !*name)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no name")
/* Unlink */
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if(H5G_unlink(&loc, name, H5AC_dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to unlink object")
done:
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FUNC_LEAVE_API(ret_value)
} /* end H5Gunlink() */
/*-------------------------------------------------------------------------
* Function: H5Gget_objinfo
*
* Purpose: Returns information about an object. If FOLLOW_LINK is
* non-zero then all symbolic links are followed; otherwise all
* links except the last component of the name are followed.
*
* Return: Non-negative on success, with the fields of STATBUF (if
* non-null) initialized. Negative on failure.
*
* Programmer: Robb Matzke
* Monday, April 13, 1998
*
*-------------------------------------------------------------------------
*/
herr_t
H5Gget_objinfo(hid_t loc_id, const char *name, hbool_t follow_link,
H5G_stat_t *statbuf/*out*/)
{
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H5G_loc_t loc;
herr_t ret_value = SUCCEED; /* Return value */
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FUNC_ENTER_API(H5Gget_objinfo, FAIL)
H5TRACE4("e","isbx",loc_id,name,follow_link,statbuf);
/* Check arguments */
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if(H5G_loc(loc_id, &loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location")
if(!name || !*name)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no name specified")
/* Get info */
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if(H5G_get_objinfo(&loc, name, follow_link, statbuf, H5AC_ind_dxpl_id) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_CANTINIT, FAIL, "cannot stat object")
done:
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FUNC_LEAVE_API(ret_value)
} /* end H5Gget_objinfo() */
/*-------------------------------------------------------------------------
* Function: H5Gget_linkval
*
* Purpose: Returns the value of a symbolic link whose name is NAME. At
* most SIZE characters (counting the null terminator) are
* copied to the BUF result buffer.
*
[svn-r876] Changes since 19981102 ---------------------- ./bin/snapshot Made same fix as for the release script yesterday. ./src/H5D.c ./src/H5Dprivate.h ./src/H5G.c ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5O.c ./src/H5Oprivate.h ./src/H5RA.c ./src/H5RAprivate.h ./src/H5T.c ./src/H5Tprivate.h Improved object type checking. Instead of determining the object type by trying to open each of the possible types, we keep a table of associations between object type number (like H5G_GROUP, H5G_DATASET, H5D_TYPE, and H5D_RAGGED) and an `isa' function that returns true if the object header has the right messages to make the object a particular type. This mechanism also allows specialization of object types by permitting an object to satisfy more than one `isa' function. Added `isa' functions for groups, datasets, ragged arrays, and committed data types. ./src/H5config.h.in Added HAVE_STAT_ST_BLOCKS. I thought this had already been added, but apparently not. ./tools/h5ls.c Removed system include files since they're already included by H5private.h and since I wasn't including them portably anyway. By default, 1-byte integer types are printed as integer values instead of ASCII characters. However, the `-s' or `--string' command-line switch causes the data to be interpretted as ASCII. String data types are always printed as character data. Ragged arrays are now identified as ragged arrays and h5ls doesn't descend into the group automatically. This uses the new object type specialization stuff. ./tools/h5tools.c ./tools/h5tools.h Added the ability to print 1-byte integer types as either ASCII or numeric data instead of always ASCII. The default is to print as numeric data.
1998-11-06 04:28:34 +08:00
* Return: Success: Non-negative with the link value in BUF.
*
* Failure: Negative
*
* Programmer: Robb Matzke
* Monday, April 13, 1998
*
*-------------------------------------------------------------------------
*/
herr_t
[svn-r620] Changes since 19980825 ---------------------- ./MANIFEST ./src/H5R.c [NEW] ./src/H5Rprivate.h [NEW] ./src/H5Rpublic.h [NEW] ./src/Makefile.in ./src/hdf5.h ./test/ragged.c [NEW] Preliminary support for 2d ragged arrays for Mark Miller and Jim Reus. Not fully implemented yet. The test is not actually part of `make test' because we still have some memory problems. ./src/H5E.c ./src/H5Epublic.h Added H5E_RAGGED as a major error number. ./bin/release Checks the MANIFEST file against `svf ls' on systems that have it. ./bin/trace Fixed a bug that caused arguments of type `void *x[]' to not be handled. ./src/H5.c Removed unused variables and changed a couple types to fix compiler warnings. Added tracing support for ragged array object ID's and arrays of pointers. ./src/H5D.c H5Dcreate() will complain if either of the property lists are invalid (instead of using the default). ./src/H5D.c ./src/H5Dprivate.h Split H5Dget_space() into an API and internal function so it can be called from the new ragged array layer. ./src/H5Fistore.c Fixed warnings about unsigned vs. signed comparisons. ./src/H5Flow.c Fixed a warning about a variable being shadowed in the MPI-IO stuff. ./src/H5Iprivate.h ./src/H5Ipublic.h Added the H5_RAGGED atom group. ./src/H5Shyper.c Fixed some freeing-free-memory errors that resulted when certain arrays were freed but the pointers were left in the data structures. I simply set the pointers to null after they were freed. ./src/H5Sprivate.h ./src/H5Sselect.c Split the H5Sselect_hyperslab() function into an API and a private function so it could be called from the ragged array layer. Added H5S_SEL_ERROR and H5S_SEL_N to the switch statements to get rid or compiler warnings. ./src/H5Tconv.c Removed a misleading comment. ./test/bittests.c Fixed a warning about a printf(). ./test/cmpd_dset.c Fixed warnings about unused variables because of test #11 being commented out. ./bin/trace Shortened the right margin for the output to allow room for the `);' at the end of the TRACE() macros.
1998-08-28 00:48:50 +08:00
H5Gget_linkval(hid_t loc_id, const char *name, size_t size, char *buf/*out*/)
{
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H5G_loc_t loc;
herr_t ret_value = SUCCEED; /* Return value */
2005-11-15 10:55:39 +08:00
FUNC_ENTER_API(H5Gget_linkval, FAIL)
H5TRACE4("e","iszx",loc_id,name,size,buf);
/* Check arguments */
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if(H5G_loc(loc_id, &loc))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location")
if(!name || !*name)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no name specified")
/* Get the link value */
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if(H5G_linkval(&loc, name, size, buf, H5AC_ind_dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "unable to get link value")
done:
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FUNC_LEAVE_API(ret_value)
} /* end H5Gget_linkval() */
/*-------------------------------------------------------------------------
* Function: H5Gset_comment
*
* Purpose: Gives the specified object a comment. The COMMENT string
* should be a null terminated string. An object can have only
* one comment at a time. Passing NULL for the COMMENT argument
* will remove the comment property from the object.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Monday, July 20, 1998
*
*-------------------------------------------------------------------------
*/
herr_t
[svn-r620] Changes since 19980825 ---------------------- ./MANIFEST ./src/H5R.c [NEW] ./src/H5Rprivate.h [NEW] ./src/H5Rpublic.h [NEW] ./src/Makefile.in ./src/hdf5.h ./test/ragged.c [NEW] Preliminary support for 2d ragged arrays for Mark Miller and Jim Reus. Not fully implemented yet. The test is not actually part of `make test' because we still have some memory problems. ./src/H5E.c ./src/H5Epublic.h Added H5E_RAGGED as a major error number. ./bin/release Checks the MANIFEST file against `svf ls' on systems that have it. ./bin/trace Fixed a bug that caused arguments of type `void *x[]' to not be handled. ./src/H5.c Removed unused variables and changed a couple types to fix compiler warnings. Added tracing support for ragged array object ID's and arrays of pointers. ./src/H5D.c H5Dcreate() will complain if either of the property lists are invalid (instead of using the default). ./src/H5D.c ./src/H5Dprivate.h Split H5Dget_space() into an API and internal function so it can be called from the new ragged array layer. ./src/H5Fistore.c Fixed warnings about unsigned vs. signed comparisons. ./src/H5Flow.c Fixed a warning about a variable being shadowed in the MPI-IO stuff. ./src/H5Iprivate.h ./src/H5Ipublic.h Added the H5_RAGGED atom group. ./src/H5Shyper.c Fixed some freeing-free-memory errors that resulted when certain arrays were freed but the pointers were left in the data structures. I simply set the pointers to null after they were freed. ./src/H5Sprivate.h ./src/H5Sselect.c Split the H5Sselect_hyperslab() function into an API and a private function so it could be called from the ragged array layer. Added H5S_SEL_ERROR and H5S_SEL_N to the switch statements to get rid or compiler warnings. ./src/H5Tconv.c Removed a misleading comment. ./test/bittests.c Fixed a warning about a printf(). ./test/cmpd_dset.c Fixed warnings about unused variables because of test #11 being commented out. ./bin/trace Shortened the right margin for the output to allow room for the `);' at the end of the TRACE() macros.
1998-08-28 00:48:50 +08:00
H5Gset_comment(hid_t loc_id, const char *name, const char *comment)
{
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H5G_loc_t loc;
herr_t ret_value = SUCCEED; /* Return value */
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FUNC_ENTER_API(H5Gset_comment, FAIL)
H5TRACE3("e","iss",loc_id,name,comment);
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if(H5G_loc(loc_id, &loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location")
if(!name || !*name)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no name specified")
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if(H5G_set_comment(&loc, name, comment, H5AC_dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to set comment value")
done:
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FUNC_LEAVE_API(ret_value)
} /* end H5Gset_comment() */
/*-------------------------------------------------------------------------
* Function: H5Gget_comment
*
* Purpose: Return at most BUFSIZE characters of the comment for the
* specified object. If BUFSIZE is large enough to hold the
* entire comment then the comment string will be null
* terminated, otherwise it will not. If the object does not
[svn-r537] Changes since 19980722 ---------------------- ./src/H5A.c ./src/H5Apublic.h ./test/tattr.c Switched the order of the second and third argument of H5Aget_name() to make it consistent with other functions that take buffers and buffer sizes. ./src/H5G.c ./src/H5Gpublic.h ./src/H5Gprivate.h The H5Gget_comment() function returns the size of the comment including the null terminator. If the object has no comment then zero is returned. If an error occurs then a negative value is returned. ./MANIFEST ./tools/Makefile.in ./tools/h5tools.h [NEW] ./tools/h5dump.c [NEW] Created a library for printing values of datasets in a way that looks nice. It's not done yet, but I needed it for debugging the contents of files from Jim Reus. ./tools/h5ls.c Added the `-d' and `--dump' options which cause the contents of a dataset to be printed. Added `-w N' and `--width=N' options to control how wide the raw data output should be. If you want single-column output then say `-w1'. Printing dataset values can now handle datasets of any integer or floating point atomic type. As a special case, integers which are one byte wide are treated a character strings for now. Sample output: $ h5ls --dump --width=60 banana.hdf ARCHIVE 0:0:0:744 Dataset {52/Inf} Data: (0) "U struct complex { double R; double I; };\012V" (43) " double;\012" U 0:0:0:2500 Dataset {256/512} Data: printing of compound data types is not implemented yet V 0:0:0:3928 Dataset {256/512} Data: (0) 0, 0.015625, 0.03125, 0.046875, 0.0625, (5) 0.078125, 0.09375, 0.109375, 0.125, 0.140625, (10) 0.15625, 0.171875, 0.1875, 0.203125, 0.21875, (15) 0.234375, 0.25, 0.265625, 0.28125, 0.296875, ...
1998-07-24 05:19:17 +08:00
* have a comment value then no bytes are copied to the BUF
* buffer.
*
[svn-r537] Changes since 19980722 ---------------------- ./src/H5A.c ./src/H5Apublic.h ./test/tattr.c Switched the order of the second and third argument of H5Aget_name() to make it consistent with other functions that take buffers and buffer sizes. ./src/H5G.c ./src/H5Gpublic.h ./src/H5Gprivate.h The H5Gget_comment() function returns the size of the comment including the null terminator. If the object has no comment then zero is returned. If an error occurs then a negative value is returned. ./MANIFEST ./tools/Makefile.in ./tools/h5tools.h [NEW] ./tools/h5dump.c [NEW] Created a library for printing values of datasets in a way that looks nice. It's not done yet, but I needed it for debugging the contents of files from Jim Reus. ./tools/h5ls.c Added the `-d' and `--dump' options which cause the contents of a dataset to be printed. Added `-w N' and `--width=N' options to control how wide the raw data output should be. If you want single-column output then say `-w1'. Printing dataset values can now handle datasets of any integer or floating point atomic type. As a special case, integers which are one byte wide are treated a character strings for now. Sample output: $ h5ls --dump --width=60 banana.hdf ARCHIVE 0:0:0:744 Dataset {52/Inf} Data: (0) "U struct complex { double R; double I; };\012V" (43) " double;\012" U 0:0:0:2500 Dataset {256/512} Data: printing of compound data types is not implemented yet V 0:0:0:3928 Dataset {256/512} Data: (0) 0, 0.015625, 0.03125, 0.046875, 0.0625, (5) 0.078125, 0.09375, 0.109375, 0.125, 0.140625, (10) 0.15625, 0.171875, 0.1875, 0.203125, 0.21875, (15) 0.234375, 0.25, 0.265625, 0.28125, 0.296875, ...
1998-07-24 05:19:17 +08:00
* Return: Success: Number of characters in the comment counting
* the null terminator. The value returned may
* be larger than the BUFSIZE argument.
*
* Failure: Negative
*
* Programmer: Robb Matzke
* Monday, July 20, 1998
*
*-------------------------------------------------------------------------
*/
[svn-r537] Changes since 19980722 ---------------------- ./src/H5A.c ./src/H5Apublic.h ./test/tattr.c Switched the order of the second and third argument of H5Aget_name() to make it consistent with other functions that take buffers and buffer sizes. ./src/H5G.c ./src/H5Gpublic.h ./src/H5Gprivate.h The H5Gget_comment() function returns the size of the comment including the null terminator. If the object has no comment then zero is returned. If an error occurs then a negative value is returned. ./MANIFEST ./tools/Makefile.in ./tools/h5tools.h [NEW] ./tools/h5dump.c [NEW] Created a library for printing values of datasets in a way that looks nice. It's not done yet, but I needed it for debugging the contents of files from Jim Reus. ./tools/h5ls.c Added the `-d' and `--dump' options which cause the contents of a dataset to be printed. Added `-w N' and `--width=N' options to control how wide the raw data output should be. If you want single-column output then say `-w1'. Printing dataset values can now handle datasets of any integer or floating point atomic type. As a special case, integers which are one byte wide are treated a character strings for now. Sample output: $ h5ls --dump --width=60 banana.hdf ARCHIVE 0:0:0:744 Dataset {52/Inf} Data: (0) "U struct complex { double R; double I; };\012V" (43) " double;\012" U 0:0:0:2500 Dataset {256/512} Data: printing of compound data types is not implemented yet V 0:0:0:3928 Dataset {256/512} Data: (0) 0, 0.015625, 0.03125, 0.046875, 0.0625, (5) 0.078125, 0.09375, 0.109375, 0.125, 0.140625, (10) 0.15625, 0.171875, 0.1875, 0.203125, 0.21875, (15) 0.234375, 0.25, 0.265625, 0.28125, 0.296875, ...
1998-07-24 05:19:17 +08:00
int
[svn-r620] Changes since 19980825 ---------------------- ./MANIFEST ./src/H5R.c [NEW] ./src/H5Rprivate.h [NEW] ./src/H5Rpublic.h [NEW] ./src/Makefile.in ./src/hdf5.h ./test/ragged.c [NEW] Preliminary support for 2d ragged arrays for Mark Miller and Jim Reus. Not fully implemented yet. The test is not actually part of `make test' because we still have some memory problems. ./src/H5E.c ./src/H5Epublic.h Added H5E_RAGGED as a major error number. ./bin/release Checks the MANIFEST file against `svf ls' on systems that have it. ./bin/trace Fixed a bug that caused arguments of type `void *x[]' to not be handled. ./src/H5.c Removed unused variables and changed a couple types to fix compiler warnings. Added tracing support for ragged array object ID's and arrays of pointers. ./src/H5D.c H5Dcreate() will complain if either of the property lists are invalid (instead of using the default). ./src/H5D.c ./src/H5Dprivate.h Split H5Dget_space() into an API and internal function so it can be called from the new ragged array layer. ./src/H5Fistore.c Fixed warnings about unsigned vs. signed comparisons. ./src/H5Flow.c Fixed a warning about a variable being shadowed in the MPI-IO stuff. ./src/H5Iprivate.h ./src/H5Ipublic.h Added the H5_RAGGED atom group. ./src/H5Shyper.c Fixed some freeing-free-memory errors that resulted when certain arrays were freed but the pointers were left in the data structures. I simply set the pointers to null after they were freed. ./src/H5Sprivate.h ./src/H5Sselect.c Split the H5Sselect_hyperslab() function into an API and a private function so it could be called from the ragged array layer. Added H5S_SEL_ERROR and H5S_SEL_N to the switch statements to get rid or compiler warnings. ./src/H5Tconv.c Removed a misleading comment. ./test/bittests.c Fixed a warning about a printf(). ./test/cmpd_dset.c Fixed warnings about unused variables because of test #11 being commented out. ./bin/trace Shortened the right margin for the output to allow room for the `);' at the end of the TRACE() macros.
1998-08-28 00:48:50 +08:00
H5Gget_comment(hid_t loc_id, const char *name, size_t bufsize, char *buf)
{
2005-11-15 10:55:39 +08:00
H5G_loc_t loc;
int ret_value;
2005-11-15 10:55:39 +08:00
FUNC_ENTER_API(H5Gget_comment, FAIL)
[svn-r537] Changes since 19980722 ---------------------- ./src/H5A.c ./src/H5Apublic.h ./test/tattr.c Switched the order of the second and third argument of H5Aget_name() to make it consistent with other functions that take buffers and buffer sizes. ./src/H5G.c ./src/H5Gpublic.h ./src/H5Gprivate.h The H5Gget_comment() function returns the size of the comment including the null terminator. If the object has no comment then zero is returned. If an error occurs then a negative value is returned. ./MANIFEST ./tools/Makefile.in ./tools/h5tools.h [NEW] ./tools/h5dump.c [NEW] Created a library for printing values of datasets in a way that looks nice. It's not done yet, but I needed it for debugging the contents of files from Jim Reus. ./tools/h5ls.c Added the `-d' and `--dump' options which cause the contents of a dataset to be printed. Added `-w N' and `--width=N' options to control how wide the raw data output should be. If you want single-column output then say `-w1'. Printing dataset values can now handle datasets of any integer or floating point atomic type. As a special case, integers which are one byte wide are treated a character strings for now. Sample output: $ h5ls --dump --width=60 banana.hdf ARCHIVE 0:0:0:744 Dataset {52/Inf} Data: (0) "U struct complex { double R; double I; };\012V" (43) " double;\012" U 0:0:0:2500 Dataset {256/512} Data: printing of compound data types is not implemented yet V 0:0:0:3928 Dataset {256/512} Data: (0) 0, 0.015625, 0.03125, 0.046875, 0.0625, (5) 0.078125, 0.09375, 0.109375, 0.125, 0.140625, (10) 0.15625, 0.171875, 0.1875, 0.203125, 0.21875, (15) 0.234375, 0.25, 0.265625, 0.28125, 0.296875, ...
1998-07-24 05:19:17 +08:00
H5TRACE4("Is","iszs",loc_id,name,bufsize,buf);
2005-11-15 10:55:39 +08:00
if(H5G_loc(loc_id, &loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location")
if(!name || !*name)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no name specified")
if(bufsize > 0 && !buf)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no buffer specified")
2005-11-15 10:55:39 +08:00
if((ret_value = H5G_get_comment(&loc, name, bufsize, buf, H5AC_ind_dxpl_id)) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to get comment value")
done:
2005-11-15 10:55:39 +08:00
FUNC_LEAVE_API(ret_value)
} /* end H5Gget_comment() */
/*-------------------------------------------------------------------------
* Function: H5Gget_create_plist
*
* Purpose: Returns a copy of the group creation property list.
*
* Return: Success: ID for a copy of the group creation
* property list. The property list ID should be
* released by calling H5Pclose().
*
* Failure: FAIL
*
* Programmer: Quincey Koziol
* Tuesday, October 25, 2005
*
*-------------------------------------------------------------------------
*/
hid_t
H5Gget_create_plist(hid_t group_id)
{
htri_t ginfo_exists = 0;
H5G_t *grp = NULL;
H5P_genplist_t *gcpl_plist;
H5P_genplist_t *new_plist;
hid_t new_gcpl_id = FAIL;
hid_t ret_value = FAIL;
FUNC_ENTER_API(H5Gget_create_plist, FAIL)
H5TRACE1("i","i",group_id);
2005-11-15 10:55:39 +08:00
/* Check args */
if(NULL == (grp = H5I_object_verify(group_id, H5I_GROUP)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a group")
/* Copy the default group creation property list */
if(NULL == (gcpl_plist = H5I_object(H5P_LST_GROUP_CREATE_g)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "can't get default group creation property list")
if((new_gcpl_id = H5P_copy_plist(gcpl_plist)) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTGET, FAIL, "unable to copy the creation property list")
if(NULL == (new_plist = H5I_object(new_gcpl_id)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "can't get property list")
/* Check for the group having a group info message */
if((ginfo_exists = H5O_exists(&(grp->oloc), H5O_GINFO_ID, 0, H5AC_dxpl_id)) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to read object header")
if(ginfo_exists) {
H5O_ginfo_t ginfo; /* Group info message */
/* Read the group info */
if(NULL == H5O_read(&(grp->oloc), H5O_GINFO_ID, 0, &ginfo, H5AC_dxpl_id))
HGOTO_ERROR(H5E_SYM, H5E_BADMESG, FAIL, "can't get group info")
/* Set the group info for the property list */
if(H5P_set(new_plist, H5G_CRT_GROUP_INFO_NAME, &ginfo) < 0)
HGOTO_ERROR(H5E_PLIST, H5E_CANTSET, FAIL, "can't set group info")
} /* end if */
/* Set the return value */
ret_value = new_gcpl_id;
done:
if(ret_value < 0) {
if(new_gcpl_id > 0)
(void)H5I_dec_ref(new_gcpl_id);
} /* end if */
FUNC_LEAVE_API(ret_value)
} /* end H5Gget_create_plist() */
/*-------------------------------------------------------------------------
* Function: H5Gcopy
*
* Purpose: Copy an object to destination location
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Peter Cao
* June 4, 2005
*
*-------------------------------------------------------------------------
*/
herr_t
2005-11-15 10:55:39 +08:00
H5Gcopy(hid_t src_id, hid_t dst_id, const char *name_dst, hid_t plist_id)
{
2005-11-15 10:55:39 +08:00
H5G_loc_t src_loc; /* Source object group location */
H5G_loc_t dst_loc; /* Destination group location */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(H5Gcopy, FAIL)
H5TRACE4("e","iisi",src_id,dst_id,name_dst,plist_id);
/* Check arguments */
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if(H5G_loc(src_id, &src_loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location")
if(H5G_loc(dst_id, &dst_loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location")
if(!name_dst || !*name_dst)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no name specified")
/* Get correct property list */
/* XXX: This is a kludge, to use the datatype creation property list - QAK */
if(H5P_DEFAULT == plist_id)
plist_id = H5P_DATATYPE_CREATE_DEFAULT;
else
if(TRUE != H5P_isa_class(plist_id, H5P_DATATYPE_CREATE))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not object create property list")
2005-11-15 10:55:39 +08:00
if(H5G_copy(&src_loc, &dst_loc, name_dst, plist_id) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, FAIL, "unable to copy object")
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Gcopy() */
[svn-r129] Changes since 19970916 ---------------------- ./config/depend.in Fixed backslashes in sed script because the H5Gnode.c dependency info was disappearing. You'll have to rerun config.status to rebuild the Makefiles unless you use gnu make. ./config/conclude.in Also removes emacs backup files, TAGS, and svf backup files. ./config/linux Grouped gcc flags and added provisions for debugging vs. production. ./html/H5.format.html Updated messages 0x0008, 0x0009, and 0x000A. ./html/storage.html Documentation describing storage schemes. ./src/Makefile.in ./test/Makefile.in New source files. ./src/H5A.c ./src/H5Apublic.h ./src/H5C.c Changed VOIDP to void* in a couple places. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Bprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h ./src/H5H.c ./src/H5O.c Removed `const' from some variables because H5G_node_found() wanted to modify it's udata argument. Removing const there caused it to cascade to these other locations. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5H.c ./src/H5O.c Added an extra argument to H5AC_find_f() and H5AC_protect(). This arg gets passed to the load() method. Also added an extra argument to the H5AC_find() macro. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra argument passed to the sizeof_rkey() method. ./src/H5Fprivate.c ./src/H5Fistore.c (new) Added indexed I/O operations. ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h Beginning to add H5G_open/close and related bug fixes. ./src/H5Oprivate.h ./src/H5Oistore.c (new) Added the H5O_ISTORE messsage (0x0008) for indexed storage of objects. ./src/H5private.h Added extra braces around both sides of the FUNC_ENTER() and FUNC_LEAVE() macros so FUNC_ENTER() can appear before declarations or after executable statements the second case is used by H5G_namei() to initialize output arguments to sane values before FUNC_ENTER() might return failure. int f () { int decl1; printf ("This happens before FUNC_ENTER()\n"); FUNC_ENTER (...); int another_declaration; ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra arguments for key encoding and decoding. ./src/H5E.c ./src/H5Epublic.h ./src/H5Fistore.c ./src/H5Oistore.c ./src/H5Oprivate.h Indexed, chunked, sparse storage (not ready for general consumption yet). ./src/H5V.c (new) ./src/H5Vprivate.h (new) ./test/hyperslab.c (new) Vector, array, and hyperslab functions. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Fistore.c ./src/H5Gnode.c ./src/H5V.c ./src/H5Vprivate.h ./test/hyperslab.c Added functionality for indexed storage. ./src/H5F.c Fixed problems with seek optimizing. Recommend we disable it until we can implement it in the file/address class since all of HDF5 must be aware of it. ./src/H5O.c Fixed comeent speling erorr :-) ./MANIFEST Added new files. ./config/conclude.in Added the word `Testing' to the test cases. So if a test program is called hyperslab then the make output will contain the line `Testing hyperslab'. ./config/linux The default file I/O library is Posix section 2 on my linux machine so I can do some I/O performance testing. ./src/H5C.c ./src/H5Cprivate.h ./src/H5Cpublic.h Added ability to set size of indexed-storage B-tree. ./src/H5D.c ./src/H5E.c ./src/H5Epublic.h ./src/H5F.c ./src/H5Fprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5Gshad.c ./src/H5Gstab.c ./test/stab.c Changed `directory' to `group' in numerous places. ./src/H5private.h The FILELIB constant can be set on the compile command-line. ./src/istore.c NEW Tests for indexed storage.
1997-10-21 07:14:35 +08:00
/*
*-------------------------------------------------------------------------
*-------------------------------------------------------------------------
* N O A P I F U N C T I O N S B E Y O N D T H I S P O I N T
*-------------------------------------------------------------------------
*-------------------------------------------------------------------------
[svn-r129] Changes since 19970916 ---------------------- ./config/depend.in Fixed backslashes in sed script because the H5Gnode.c dependency info was disappearing. You'll have to rerun config.status to rebuild the Makefiles unless you use gnu make. ./config/conclude.in Also removes emacs backup files, TAGS, and svf backup files. ./config/linux Grouped gcc flags and added provisions for debugging vs. production. ./html/H5.format.html Updated messages 0x0008, 0x0009, and 0x000A. ./html/storage.html Documentation describing storage schemes. ./src/Makefile.in ./test/Makefile.in New source files. ./src/H5A.c ./src/H5Apublic.h ./src/H5C.c Changed VOIDP to void* in a couple places. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Bprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h ./src/H5H.c ./src/H5O.c Removed `const' from some variables because H5G_node_found() wanted to modify it's udata argument. Removing const there caused it to cascade to these other locations. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5H.c ./src/H5O.c Added an extra argument to H5AC_find_f() and H5AC_protect(). This arg gets passed to the load() method. Also added an extra argument to the H5AC_find() macro. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra argument passed to the sizeof_rkey() method. ./src/H5Fprivate.c ./src/H5Fistore.c (new) Added indexed I/O operations. ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h Beginning to add H5G_open/close and related bug fixes. ./src/H5Oprivate.h ./src/H5Oistore.c (new) Added the H5O_ISTORE messsage (0x0008) for indexed storage of objects. ./src/H5private.h Added extra braces around both sides of the FUNC_ENTER() and FUNC_LEAVE() macros so FUNC_ENTER() can appear before declarations or after executable statements the second case is used by H5G_namei() to initialize output arguments to sane values before FUNC_ENTER() might return failure. int f () { int decl1; printf ("This happens before FUNC_ENTER()\n"); FUNC_ENTER (...); int another_declaration; ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra arguments for key encoding and decoding. ./src/H5E.c ./src/H5Epublic.h ./src/H5Fistore.c ./src/H5Oistore.c ./src/H5Oprivate.h Indexed, chunked, sparse storage (not ready for general consumption yet). ./src/H5V.c (new) ./src/H5Vprivate.h (new) ./test/hyperslab.c (new) Vector, array, and hyperslab functions. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Fistore.c ./src/H5Gnode.c ./src/H5V.c ./src/H5Vprivate.h ./test/hyperslab.c Added functionality for indexed storage. ./src/H5F.c Fixed problems with seek optimizing. Recommend we disable it until we can implement it in the file/address class since all of HDF5 must be aware of it. ./src/H5O.c Fixed comeent speling erorr :-) ./MANIFEST Added new files. ./config/conclude.in Added the word `Testing' to the test cases. So if a test program is called hyperslab then the make output will contain the line `Testing hyperslab'. ./config/linux The default file I/O library is Posix section 2 on my linux machine so I can do some I/O performance testing. ./src/H5C.c ./src/H5Cprivate.h ./src/H5Cpublic.h Added ability to set size of indexed-storage B-tree. ./src/H5D.c ./src/H5E.c ./src/H5Epublic.h ./src/H5F.c ./src/H5Fprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5Gshad.c ./src/H5Gstab.c ./test/stab.c Changed `directory' to `group' in numerous places. ./src/H5private.h The FILELIB constant can be set on the compile command-line. ./src/istore.c NEW Tests for indexed storage.
1997-10-21 07:14:35 +08:00
*/
/*-------------------------------------------------------------------------
* Function: H5G_init_interface
*
* Purpose: Initializes the H5G interface.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Monday, January 5, 1998
*
2005-11-15 10:55:39 +08:00
* Notes: The group creation properties are registered in the property
* list interface initialization routine (H5P_init_interface)
* so that the file creation property class can inherit from it
* correctly. (Which allows the file creation property list to
* control the group creation properties of the root group of
* a file) QAK - 24/10/2005
*
*-------------------------------------------------------------------------
*/
static herr_t
H5G_init_interface(void)
{
H5P_genclass_t *crt_pclass;
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herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5G_init_interface);
/* Initialize the atom group for the group IDs */
if (H5I_register_type(H5I_GROUP, (size_t)H5I_GROUPID_HASHSIZE, H5G_RESERVED_ATOMS,
(H5I_free_t)H5G_close) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to initialize interface");
[svn-r876] Changes since 19981102 ---------------------- ./bin/snapshot Made same fix as for the release script yesterday. ./src/H5D.c ./src/H5Dprivate.h ./src/H5G.c ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5O.c ./src/H5Oprivate.h ./src/H5RA.c ./src/H5RAprivate.h ./src/H5T.c ./src/H5Tprivate.h Improved object type checking. Instead of determining the object type by trying to open each of the possible types, we keep a table of associations between object type number (like H5G_GROUP, H5G_DATASET, H5D_TYPE, and H5D_RAGGED) and an `isa' function that returns true if the object header has the right messages to make the object a particular type. This mechanism also allows specialization of object types by permitting an object to satisfy more than one `isa' function. Added `isa' functions for groups, datasets, ragged arrays, and committed data types. ./src/H5config.h.in Added HAVE_STAT_ST_BLOCKS. I thought this had already been added, but apparently not. ./tools/h5ls.c Removed system include files since they're already included by H5private.h and since I wasn't including them portably anyway. By default, 1-byte integer types are printed as integer values instead of ASCII characters. However, the `-s' or `--string' command-line switch causes the data to be interpretted as ASCII. String data types are always printed as character data. Ragged arrays are now identified as ragged arrays and h5ls doesn't descend into the group automatically. This uses the new object type specialization stuff. ./tools/h5tools.c ./tools/h5tools.h Added the ability to print 1-byte integer types as either ASCII or numeric data instead of always ASCII. The default is to print as numeric data.
1998-11-06 04:28:34 +08:00
/* ========== group Creation Property Class Initialization ============*/
assert(H5P_CLS_GROUP_CREATE_g!=-1);
/* Get the pointer to group creation class */
if(NULL == (crt_pclass = H5I_object(H5P_CLS_GROUP_CREATE_g)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a property list class")
/* Only register the default property list if it hasn't been created yet */
if(H5P_LST_GROUP_CREATE_g==(-1)) {
/* Register the default group creation property list */
if((H5P_LST_GROUP_CREATE_g = H5P_create_id(crt_pclass))<0)
HGOTO_ERROR(H5E_PLIST, H5E_CANTREGISTER, FAIL, "can't insert property into class")
} /* end if */
done:
FUNC_LEAVE_NOAPI(ret_value);
}
/*-------------------------------------------------------------------------
* Function: H5G_term_interface
*
* Purpose: Terminates the H5G interface
*
[svn-r1169] ./configure.in ./configure [REGENERATED] ./src/H5D.c ./src/H5O.c Removed H5AC, H5B, and H5T from the default list of packages to debug (because they're pretty expensive debugging), and added H5O. Also fixed a bug for undefined variable in H5D when H5S debugging is turned on but H5T debugging is turned off. ./config/conclude.in Fixed installation of header files for building in a directory other than the source directory. This fixes a bug where H5config.h wasn't being installed. ./src/H5.c ./src/H5A.c ./src/H5D.c ./src/H5F.c ./src/H5G.c ./src/H5I.c ./src/H5Iprivate.h ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5T.c ./src/H5TB.c ./src/H5Tprivate.h ./src/H5Z.c ./src/H5detect.c ./src/H5private.h Changed the way the library shuts down again. Now it handles cycles between packages and isn't so sensitive to dependencies between packages. A package might shut down only to be restarted to process a request from some other package being shut down. Loops are detected after 100 iteractions and the shutdown is aborted with a message on standard error. This also makes it a lot easier to debug. ./src/H5A.c Fixed H5A_write() and H5A_read() so they pass a non-null background buffer to the conversion functions. This is necessary when an attribute has a compound data type. ./src/H5Flow.c ./src/H5Fprivate.h ./src/H5Fsec2.c Reindented new Win32 stuff. ./src/H5Odtype.c Fixed a bug when enumeration types are used in a compound data type. The byte pointer wasn't incremented after the type information was written. ./tools/h5ls.c Compound data types display their total size because it's not always obvious from looking at the members. Scalar attributes show their space as `scalar' instead of `{}'. The index value is not printed for attributes that have only a few values. Instead the word `Data:' is printed on the first line of attribute data. Named types display their data type only if verbose output was requested.
1999-03-30 19:38:34 +08:00
* Return: Success: Positive if anything is done that might
* affect other interfaces; zero otherwise.
*
* Failure: Negative.
*
* Programmer: Robb Matzke
* Monday, January 5, 1998
*
*-------------------------------------------------------------------------
*/
int
[svn-r1169] ./configure.in ./configure [REGENERATED] ./src/H5D.c ./src/H5O.c Removed H5AC, H5B, and H5T from the default list of packages to debug (because they're pretty expensive debugging), and added H5O. Also fixed a bug for undefined variable in H5D when H5S debugging is turned on but H5T debugging is turned off. ./config/conclude.in Fixed installation of header files for building in a directory other than the source directory. This fixes a bug where H5config.h wasn't being installed. ./src/H5.c ./src/H5A.c ./src/H5D.c ./src/H5F.c ./src/H5G.c ./src/H5I.c ./src/H5Iprivate.h ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5T.c ./src/H5TB.c ./src/H5Tprivate.h ./src/H5Z.c ./src/H5detect.c ./src/H5private.h Changed the way the library shuts down again. Now it handles cycles between packages and isn't so sensitive to dependencies between packages. A package might shut down only to be restarted to process a request from some other package being shut down. Loops are detected after 100 iteractions and the shutdown is aborted with a message on standard error. This also makes it a lot easier to debug. ./src/H5A.c Fixed H5A_write() and H5A_read() so they pass a non-null background buffer to the conversion functions. This is necessary when an attribute has a compound data type. ./src/H5Flow.c ./src/H5Fprivate.h ./src/H5Fsec2.c Reindented new Win32 stuff. ./src/H5Odtype.c Fixed a bug when enumeration types are used in a compound data type. The byte pointer wasn't incremented after the type information was written. ./tools/h5ls.c Compound data types display their total size because it's not always obvious from looking at the members. Scalar attributes show their space as `scalar' instead of `{}'. The index value is not printed for attributes that have only a few values. Instead the word `Data:' is printed on the first line of attribute data. Named types display their data type only if verbose output was requested.
1999-03-30 19:38:34 +08:00
H5G_term_interface(void)
{
2005-11-15 10:55:39 +08:00
int n = 0;
2005-11-15 10:55:39 +08:00
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5G_term_interface)
if (H5_interface_initialize_g) {
2005-11-15 10:55:39 +08:00
if ((n = H5I_nmembers(H5I_GROUP))) {
H5I_clear_type(H5I_GROUP, FALSE);
[svn-r1169] ./configure.in ./configure [REGENERATED] ./src/H5D.c ./src/H5O.c Removed H5AC, H5B, and H5T from the default list of packages to debug (because they're pretty expensive debugging), and added H5O. Also fixed a bug for undefined variable in H5D when H5S debugging is turned on but H5T debugging is turned off. ./config/conclude.in Fixed installation of header files for building in a directory other than the source directory. This fixes a bug where H5config.h wasn't being installed. ./src/H5.c ./src/H5A.c ./src/H5D.c ./src/H5F.c ./src/H5G.c ./src/H5I.c ./src/H5Iprivate.h ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5T.c ./src/H5TB.c ./src/H5Tprivate.h ./src/H5Z.c ./src/H5detect.c ./src/H5private.h Changed the way the library shuts down again. Now it handles cycles between packages and isn't so sensitive to dependencies between packages. A package might shut down only to be restarted to process a request from some other package being shut down. Loops are detected after 100 iteractions and the shutdown is aborted with a message on standard error. This also makes it a lot easier to debug. ./src/H5A.c Fixed H5A_write() and H5A_read() so they pass a non-null background buffer to the conversion functions. This is necessary when an attribute has a compound data type. ./src/H5Flow.c ./src/H5Fprivate.h ./src/H5Fsec2.c Reindented new Win32 stuff. ./src/H5Odtype.c Fixed a bug when enumeration types are used in a compound data type. The byte pointer wasn't incremented after the type information was written. ./tools/h5ls.c Compound data types display their total size because it's not always obvious from looking at the members. Scalar attributes show their space as `scalar' instead of `{}'. The index value is not printed for attributes that have only a few values. Instead the word `Data:' is printed on the first line of attribute data. Named types display their data type only if verbose output was requested.
1999-03-30 19:38:34 +08:00
} else {
/* Destroy the group object id group */
H5I_dec_type_ref(H5I_GROUP);
[svn-r936] Changes since 19981119 ---------------------- ./src/H5.c ./src/H5A.c ./src/H5AC.c ./src/H5B.c ./src/H5D.c ./src/H5E.c ./src/H5F.c ./src/H5Farray.c ./src/H5Fcore.c ./src/H5Ffamily.c ./src/H5Fistore.c ./src/H5Flow.c ./src/H5Fmpio.c ./src/H5Fsec2.c ./src/H5Fsplit.c ./src/H5Fstdio.c ./src/H5G.c ./src/H5Gent.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5HG.c ./src/H5HL.c ./src/H5I.c ./src/H5Iprivate.h ./src/H5MF.c ./src/H5MM.c ./src/H5O.c ./src/H5Oattr.c ./src/H5Ocomp.c ./src/H5Ocont.c ./src/H5Odtype.c ./src/H5Oefl.c ./src/H5Ofill.c ./src/H5Olayout.c ./src/H5Omtime.c ./src/H5Oname.c ./src/H5Osdspace.c ./src/H5Oshared.c ./src/H5Ostab.c ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5Sall.c ./src/H5Shyper.c ./src/H5Smpio.c ./src/H5Snone.c ./src/H5Spoint.c ./src/H5Sselect.c ./src/H5T.c ./src/H5TB.c ./src/H5Tbit.c ./src/H5Tconv.c ./src/H5V.c ./src/H5Z.c ./src/H5detect.c ./src/H5private.h Most of these changes are because the `interface_initialize_g' variable change from hbool_t to int. It's a one line change. Changed the way the library is closed so we have more control over the order the interfaces are shut down. Instead of registering an atexit() function for every interface in some haphazard order we just register one: H5_term_library() which then calls the H5*_term_interface() functions in a well-defined order. If the library is closed and then reopened repeatedly by calling H5close() and H5open() in a loop we only add one copy of the library termination functions with atexit(). Termination is a two-step process in order to help detect programming errors that would cause an infinite loop caused by the termination of one interface waking up some other previously terminated interface. The first step terminates the interface and *marks it as unusable*. After all interfaces are terminated then we mark them all as usable again. The FUNC_ENTER() macro has been modified to return failure or to dump core (depending on whether NDEBUG is defined) if we try to call an interface while it's shutting down. ./src/H5.c The H5dont_atexit() function returns failure if it's called more than once or if it's called too late. However, the error stack is not automatically printed on failure because the library might not be initialized yet ./test/chunk.c ./test/flush1.c ./test/flush2.c ./test/iopipe.c ./test/overhead.c ./test/ragged.c Changed the extra cast for Win32 so we do floating point division again -- it was just confusion about precedence and associativity of casting and the C coercion rules. Removed extra carriage returns inserted by broken operating system. ./src/H5Ffamily.c Fixed an bug where H5F_fam_write() lowered the EOF marker for one of the family members causing H5F_fam_read() to read zeros. ./test/h5test.h [NEW] ./test/h5test.c [NEW] ./test/Makefile.in ./test/bittests.c ./test/cmpd_dset.c ./test/dsets.c ./test/dtypes.c ./test/extend.c ./test/external.c Support library for test files. This isn't done yet but Katie's contractions are ~10 minutes apart so I figured I better back this stuff up just in case I'm not here next week... Eventually all test files will understand HDF5_DRIVER to name the low level file driver and parameters so we can easily test various drivers. They will also understand HDF5_PREFIX to prepend to the beginning of file names which is necessary for testing ROMIO with various drivers. Also, the cleanup function will know how to use the file name prefix and will understand different file driver naming schemes like file families. I'm not sure they'll understand the `gsf:' type prefixes yet. Note, the external test is completely commented out because I'm in the middle of modifying it. It will still compile and run but it doesn't test anything at the moment.
1998-11-21 11:36:51 +08:00
/* Free the global component buffer */
2005-11-15 10:55:39 +08:00
H5G_traverse_term_interface();
[svn-r1169] ./configure.in ./configure [REGENERATED] ./src/H5D.c ./src/H5O.c Removed H5AC, H5B, and H5T from the default list of packages to debug (because they're pretty expensive debugging), and added H5O. Also fixed a bug for undefined variable in H5D when H5S debugging is turned on but H5T debugging is turned off. ./config/conclude.in Fixed installation of header files for building in a directory other than the source directory. This fixes a bug where H5config.h wasn't being installed. ./src/H5.c ./src/H5A.c ./src/H5D.c ./src/H5F.c ./src/H5G.c ./src/H5I.c ./src/H5Iprivate.h ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5T.c ./src/H5TB.c ./src/H5Tprivate.h ./src/H5Z.c ./src/H5detect.c ./src/H5private.h Changed the way the library shuts down again. Now it handles cycles between packages and isn't so sensitive to dependencies between packages. A package might shut down only to be restarted to process a request from some other package being shut down. Loops are detected after 100 iteractions and the shutdown is aborted with a message on standard error. This also makes it a lot easier to debug. ./src/H5A.c Fixed H5A_write() and H5A_read() so they pass a non-null background buffer to the conversion functions. This is necessary when an attribute has a compound data type. ./src/H5Flow.c ./src/H5Fprivate.h ./src/H5Fsec2.c Reindented new Win32 stuff. ./src/H5Odtype.c Fixed a bug when enumeration types are used in a compound data type. The byte pointer wasn't incremented after the type information was written. ./tools/h5ls.c Compound data types display their total size because it's not always obvious from looking at the members. Scalar attributes show their space as `scalar' instead of `{}'. The index value is not printed for attributes that have only a few values. Instead the word `Data:' is printed on the first line of attribute data. Named types display their data type only if verbose output was requested.
1999-03-30 19:38:34 +08:00
/* Mark closed */
H5_interface_initialize_g = 0;
[svn-r1169] ./configure.in ./configure [REGENERATED] ./src/H5D.c ./src/H5O.c Removed H5AC, H5B, and H5T from the default list of packages to debug (because they're pretty expensive debugging), and added H5O. Also fixed a bug for undefined variable in H5D when H5S debugging is turned on but H5T debugging is turned off. ./config/conclude.in Fixed installation of header files for building in a directory other than the source directory. This fixes a bug where H5config.h wasn't being installed. ./src/H5.c ./src/H5A.c ./src/H5D.c ./src/H5F.c ./src/H5G.c ./src/H5I.c ./src/H5Iprivate.h ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5T.c ./src/H5TB.c ./src/H5Tprivate.h ./src/H5Z.c ./src/H5detect.c ./src/H5private.h Changed the way the library shuts down again. Now it handles cycles between packages and isn't so sensitive to dependencies between packages. A package might shut down only to be restarted to process a request from some other package being shut down. Loops are detected after 100 iteractions and the shutdown is aborted with a message on standard error. This also makes it a lot easier to debug. ./src/H5A.c Fixed H5A_write() and H5A_read() so they pass a non-null background buffer to the conversion functions. This is necessary when an attribute has a compound data type. ./src/H5Flow.c ./src/H5Fprivate.h ./src/H5Fsec2.c Reindented new Win32 stuff. ./src/H5Odtype.c Fixed a bug when enumeration types are used in a compound data type. The byte pointer wasn't incremented after the type information was written. ./tools/h5ls.c Compound data types display their total size because it's not always obvious from looking at the members. Scalar attributes show their space as `scalar' instead of `{}'. The index value is not printed for attributes that have only a few values. Instead the word `Data:' is printed on the first line of attribute data. Named types display their data type only if verbose output was requested.
1999-03-30 19:38:34 +08:00
n = 1; /*H5I*/
2005-11-15 10:55:39 +08:00
} /* end else */
} /* end if */
[svn-r876] Changes since 19981102 ---------------------- ./bin/snapshot Made same fix as for the release script yesterday. ./src/H5D.c ./src/H5Dprivate.h ./src/H5G.c ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5O.c ./src/H5Oprivate.h ./src/H5RA.c ./src/H5RAprivate.h ./src/H5T.c ./src/H5Tprivate.h Improved object type checking. Instead of determining the object type by trying to open each of the possible types, we keep a table of associations between object type number (like H5G_GROUP, H5G_DATASET, H5D_TYPE, and H5D_RAGGED) and an `isa' function that returns true if the object header has the right messages to make the object a particular type. This mechanism also allows specialization of object types by permitting an object to satisfy more than one `isa' function. Added `isa' functions for groups, datasets, ragged arrays, and committed data types. ./src/H5config.h.in Added HAVE_STAT_ST_BLOCKS. I thought this had already been added, but apparently not. ./tools/h5ls.c Removed system include files since they're already included by H5private.h and since I wasn't including them portably anyway. By default, 1-byte integer types are printed as integer values instead of ASCII characters. However, the `-s' or `--string' command-line switch causes the data to be interpretted as ASCII. String data types are always printed as character data. Ragged arrays are now identified as ragged arrays and h5ls doesn't descend into the group automatically. This uses the new object type specialization stuff. ./tools/h5tools.c ./tools/h5tools.h Added the ability to print 1-byte integer types as either ASCII or numeric data instead of always ASCII. The default is to print as numeric data.
1998-11-06 04:28:34 +08:00
2005-11-15 10:55:39 +08:00
FUNC_LEAVE_NOAPI(n)
} /* end H5G_term_interface() */
[svn-r876] Changes since 19981102 ---------------------- ./bin/snapshot Made same fix as for the release script yesterday. ./src/H5D.c ./src/H5Dprivate.h ./src/H5G.c ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5O.c ./src/H5Oprivate.h ./src/H5RA.c ./src/H5RAprivate.h ./src/H5T.c ./src/H5Tprivate.h Improved object type checking. Instead of determining the object type by trying to open each of the possible types, we keep a table of associations between object type number (like H5G_GROUP, H5G_DATASET, H5D_TYPE, and H5D_RAGGED) and an `isa' function that returns true if the object header has the right messages to make the object a particular type. This mechanism also allows specialization of object types by permitting an object to satisfy more than one `isa' function. Added `isa' functions for groups, datasets, ragged arrays, and committed data types. ./src/H5config.h.in Added HAVE_STAT_ST_BLOCKS. I thought this had already been added, but apparently not. ./tools/h5ls.c Removed system include files since they're already included by H5private.h and since I wasn't including them portably anyway. By default, 1-byte integer types are printed as integer values instead of ASCII characters. However, the `-s' or `--string' command-line switch causes the data to be interpretted as ASCII. String data types are always printed as character data. Ragged arrays are now identified as ragged arrays and h5ls doesn't descend into the group automatically. This uses the new object type specialization stuff. ./tools/h5tools.c ./tools/h5tools.h Added the ability to print 1-byte integer types as either ASCII or numeric data instead of always ASCII. The default is to print as numeric data.
1998-11-06 04:28:34 +08:00
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
1997-08-13 06:44:46 +08:00
/*-------------------------------------------------------------------------
* Function: H5G_component
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
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*
* Purpose: Returns the pointer to the first component of the
* specified name by skipping leading slashes. Returns
* the size in characters of the component through SIZE_P not
* counting leading slashes or the null terminator.
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
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*
* Return: Success: Ptr into NAME.
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
1997-08-13 06:44:46 +08:00
*
* Failure: Ptr to the null terminator of NAME.
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
1997-08-13 06:44:46 +08:00
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 11 1997
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
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*
*-------------------------------------------------------------------------
*/
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const char *
H5G_component(const char *name, size_t *size_p)
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
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{
/* Use FUNC_ENTER_NOAPI_NOINIT_NOFUNC here to avoid performance issues */
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FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5G_component)
assert(name);
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
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while ('/' == *name)
name++;
if (size_p)
*size_p = HDstrcspn(name, "/");
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FUNC_LEAVE_NOAPI(name)
} /* end H5G_component() */
/*-------------------------------------------------------------------------
* Function: H5G_normalize
*
* Purpose: Returns a pointer to a new string which has duplicate and
* trailing slashes removed from it.
*
* Return: Success: Ptr to normalized name.
* Failure: NULL
*
* Programmer: Quincey Koziol
* Saturday, August 16, 2003
*
*-------------------------------------------------------------------------
*/
static char *
H5G_normalize(const char *name)
{
char *norm; /* Pointer to the normalized string */
size_t s,d; /* Positions within the strings */
unsigned last_slash; /* Flag to indicate last character was a slash */
char *ret_value; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5G_normalize);
/* Sanity check */
assert(name);
/* Duplicate the name, to return */
if (NULL==(norm=H5MM_strdup(name)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed for normalized string");
/* Walk through the characters, omitting duplicated '/'s */
s=d=0;
last_slash=0;
while(name[s]!='\0') {
if(name[s]=='/')
if(last_slash)
;
else {
norm[d++]=name[s];
last_slash=1;
} /* end else */
else {
norm[d++]=name[s];
last_slash=0;
} /* end else */
s++;
} /* end while */
/* Terminate normalized string */
norm[d]='\0';
/* Check for final '/' on normalized name & eliminate it */
if(d>1 && last_slash)
norm[d-1]='\0';
/* Set return value */
ret_value=norm;
done:
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5G_normalize() */
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
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/*-------------------------------------------------------------------------
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* Function: H5G_mkroot
*
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* Purpose: Creates a root group in an empty file and opens it. If a
* root group is already open then this function immediately
* returns. If ENT is non-null then it's the symbol table
* entry for an existing group which will be opened as the root
* group. Otherwise a new root group is created and then
* opened.
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
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*
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* Return: Non-negative on success/Negative on failure
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
1997-08-13 06:44:46 +08:00
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 11 1997
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
1997-08-13 06:44:46 +08:00
*
*-------------------------------------------------------------------------
*/
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herr_t
H5G_mkroot(H5F_t *f, hid_t dxpl_id, H5G_loc_t *loc)
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
1997-08-13 06:44:46 +08:00
{
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H5O_loc_t new_root_oloc; /* New root object location */
H5G_name_t new_root_path; /* New root path */
H5G_loc_t new_root_loc; /* New root location information */
H5G_loc_t root_loc; /* Root location information */
herr_t ret_value = SUCCEED; /* Return value */
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FUNC_ENTER_NOAPI(H5G_mkroot, FAIL)
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/* check args */
HDassert(f);
if(f->shared->root_grp)
HGOTO_DONE(SUCCEED)
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/* Create information needed for group nodes */
if(H5G_node_init(f) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to create group node info")
/*
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* If there is no root object then create one. The root group always starts
* with a hard link count of one since it's pointed to by the boot block.
*/
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if (loc == NULL) {
H5P_genplist_t *fc_plist; /* File creation property list */
H5O_ginfo_t ginfo; /* Group info parameters */
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/* Get the file creation property list */
/* (Which is a sub-class of the group creation property class) */
if(NULL == (fc_plist = H5I_object(f->shared->fcpl_id)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a property list")
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/* Get the group info property */
if(H5P_get(fc_plist, H5G_CRT_GROUP_INFO_NAME, &ginfo) < 0)
HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get group info")
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/* Set up group location for root group */
new_root_loc.oloc = &new_root_oloc;
new_root_loc.path = &new_root_path;
H5G_loc_reset(&new_root_loc);
loc = &new_root_loc;
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if(H5G_obj_create(f, dxpl_id, &ginfo, loc->oloc/*out*/) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to create group entry")
if(1 != H5O_link(loc->oloc, 1, dxpl_id))
HGOTO_ERROR(H5E_SYM, H5E_LINK, FAIL, "internal error (wrong link count)")
} else {
/*
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* Open the root object as a group.
*/
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if(H5O_open(loc->oloc) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTOPENOBJ, FAIL, "unable to open root group")
} /* end else */
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/* Create the path names for the root group's entry */
H5G_name_init(loc->path, "/");
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/*
* Create the group pointer. Also decrement the open object count so we
* don't count the root group as an open object. The root group will
* never be closed.
*/
if(NULL == (f->shared->root_grp = H5FL_CALLOC(H5G_t)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
if(NULL == (f->shared->root_grp->shared = H5FL_CALLOC(H5G_shared_t))) {
H5FL_FREE(H5G_t, f->shared->root_grp);
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
} /* end if */
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/* Shallow copy (take ownership) of the group object info */
root_loc.oloc = &(f->shared->root_grp->oloc);
root_loc.path = &(f->shared->root_grp->path);
if(H5G_loc_copy(&root_loc, loc, H5_COPY_SHALLOW) < 0)
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HGOTO_ERROR(H5E_SYM, H5E_CANTCOPY, FAIL, "can't copy group object location")
f->shared->root_grp->shared->fo_count = 1;
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HDassert(1 == f->nopen_objs);
f->nopen_objs = 0;
done:
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FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_mkroot() */
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
1997-08-13 06:44:46 +08:00
/*-------------------------------------------------------------------------
* Function: H5G_create
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
1997-08-13 06:44:46 +08:00
*
* Purpose: Creates a new empty group with the specified name. The name
* is either an absolute name or is relative to LOC.
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
1997-08-13 06:44:46 +08:00
*
* Return: Success: A handle for the group. The group is opened
* and should eventually be close by calling
* H5G_close().
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
1997-08-13 06:44:46 +08:00
*
* Failure: NULL
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
1997-08-13 06:44:46 +08:00
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 11 1997
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
1997-08-13 06:44:46 +08:00
*
*-------------------------------------------------------------------------
*/
static H5G_t *
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H5G_create(H5G_loc_t *loc, const char *name,
hid_t dxpl_id, hid_t gcpl_id, hid_t UNUSED gapl_id)
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
1997-08-13 06:44:46 +08:00
{
H5G_t *grp = NULL; /*new group */
H5F_t *file = NULL; /* File new group will be in */
H5P_genplist_t *gc_plist; /* Property list created */
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H5O_ginfo_t ginfo; /* Group info */
unsigned oloc_init = 0; /* Flag to indicate that the group object location was created successfully */
H5G_loc_t grp_loc; /* Group location wrapper structure */
H5G_t *ret_value; /* Return value */
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FUNC_ENTER_NOAPI_NOINIT(H5G_create)
/* check args */
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HDassert(loc);
HDassert(name && *name);
HDassert(gcpl_id != H5P_DEFAULT);
#ifdef LATER
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HDassert(gapl_id != H5P_DEFAULT);
#endif /* LATER */
/* create an open group */
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if(NULL == (grp = H5FL_CALLOC(H5G_t)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
if(NULL == (grp->shared = H5FL_CALLOC(H5G_shared_t)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
[svn-r6252] Purpose: Lots of performance improvements & a couple new internal API interfaces. Description: Performance Improvements: - Cached file offset & length sizes in shared file struct, to avoid constantly looking them up in the FCPL. - Generic property improvements: - Added "revision" number to generic property classes to speed up comparisons. - Changed method of storing properties from using a hash-table to the TBBT routines in the library. - Share the propery names between classes and the lists derived from them. - Removed redundant 'def_value' buffer from each property. - Switching code to use a "copy on write" strategy for properties in each list, where the properties in each list are shared with the properties in the class, until a property's value is changed in a list. - Fixed error in layout code which was allocating too many buffers. - Redefined public macros of the form (H5open()/H5check, <variable>) internally to only be (<variable>), avoiding innumerable useless calls to H5open() and H5check_version(). - Reuse already zeroed buffers in H5F_contig_fill instead of constantly re-zeroing them. - Don't write fill values if writing entire dataset. - Use gettimeofday() system call instead of time() system when checking the modification time of a dataset. - Added reference counted string API and use it for tracking the names of objects opening in a file (for the ID->name code). - Removed redundant H5P_get() calls in B-tree routines. - Redefine H5T datatype macros internally to the library, to avoid calling H5check redundantly. - Keep dataspace information for dataset locally instead of reading from disk each time. Added new module to track open objects in a file, to allow this (which will be useful eventually for some FPH5 metadata caching issues). - Remove H5AC_find macro which was inlining metadata cache lookups, and call function instead. - Remove redundant memset() calls from H5G_namei() routine. - Remove redundant checking of object type when locating objects in metadata cache and rely on the address only. - Create default dataset object to use when default dataset creation property list is used to create datasets, bypassing querying for all the property list values. - Use default I/O vector size when performing raw data with the default dataset transfer property list, instead of querying for I/O vector size. - Remove H5P_DEFAULT internally to the library, replacing it with more specific default property list based on the type of property list needed. - Remove redundant memset() calls in object header message (H5O*) routines. - Remove redunant memset() calls in data I/O routines. - Split free-list allocation routines into malloc() and calloc()- like routines, instead of one combined routine. - Remove lots of indirection in H5O*() routines. - Simplify metadata cache entry comparison routine (used when flushing entire cache out). - Only enable metadata cache statistics when H5AC_DEBUG is turned on, instead of always tracking them. - Simplify address comparison macro (H5F_addr_eq). - Remove redundant metadata cache entry protections during dataset creation by protecting the object header once and making all the modifications necessary for the dataset creation before unprotecting it. - Reduce # of "number of element in extent" computations performed by computing and storing the value during dataspace creation. - Simplify checking for group location's file information, when file has not been involving in file-mounting operations. - Use binary encoding for modification time, instead of ASCII. - Hoist H5HL_peek calls (to get information in a local heap) out of loops in many group routine. - Use static variable for iterators of selections, instead of dynamically allocation them each time. - Lookup & insert new entries in one step, avoiding traversing group's B-tree twice. - Fixed memory leak in H5Gget_objname_idx() routine (tangential to performance improvements, but fixed along the way). - Use free-list for reference counted strings. - Don't bother copying object names into cached group entries, since they are re-created when an object is opened. The benchmark I used to measure these results created several thousand small (2K) datasets in a file and wrote out the data for them. This is Elena's "regular.c" benchmark. These changes resulted in approximately ~4.3x speedup of the development branch when compared to the previous code in the development branch and ~1.4x speedup compared to the release branch. Additionally, these changes reduce the total memory used (code and data) by the development branch by ~800KB, bringing the development branch back into the same ballpark as the release branch. I'll send out a more detailed description of the benchmark results as a followup note. New internal API routines: Added "reference counted strings" API for tracking strings that get used by multiple owners without duplicating the strings. Added "ternary search tree" API for text->object mappings. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} Other platforms/configurations tested? FreeBSD 4.7 (sleipnir) serial & parallel Solaris 2.6 (baldric) serial
2003-01-10 01:20:03 +08:00
/* What file is the group being added to? */
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if(NULL == (file = H5G_insertion_file(loc, name, dxpl_id)))
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, NULL, "unable to locate insertion point")
/* Get the property list */
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if(NULL == (gc_plist = H5I_object(gcpl_id)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, NULL, "not a property list")
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/* Get the group info property */
if(H5P_get(gc_plist, H5G_CRT_GROUP_INFO_NAME, &ginfo) < 0)
HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, NULL, "can't get group info")
/* Create the group object header */
if(H5G_obj_create(file, dxpl_id, &ginfo, &(grp->oloc)/*out*/) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, NULL, "unable to create group object header")
oloc_init = 1; /* Indicate that the object location information is valid */
/* Insert child name into parent */
grp_loc.oloc = &(grp->oloc);
grp_loc.path = &(grp->path);
if(H5G_insert(loc, name, &grp_loc, dxpl_id, gc_plist) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINSERT, NULL, "can't insert group")
[svn-r6252] Purpose: Lots of performance improvements & a couple new internal API interfaces. Description: Performance Improvements: - Cached file offset & length sizes in shared file struct, to avoid constantly looking them up in the FCPL. - Generic property improvements: - Added "revision" number to generic property classes to speed up comparisons. - Changed method of storing properties from using a hash-table to the TBBT routines in the library. - Share the propery names between classes and the lists derived from them. - Removed redundant 'def_value' buffer from each property. - Switching code to use a "copy on write" strategy for properties in each list, where the properties in each list are shared with the properties in the class, until a property's value is changed in a list. - Fixed error in layout code which was allocating too many buffers. - Redefined public macros of the form (H5open()/H5check, <variable>) internally to only be (<variable>), avoiding innumerable useless calls to H5open() and H5check_version(). - Reuse already zeroed buffers in H5F_contig_fill instead of constantly re-zeroing them. - Don't write fill values if writing entire dataset. - Use gettimeofday() system call instead of time() system when checking the modification time of a dataset. - Added reference counted string API and use it for tracking the names of objects opening in a file (for the ID->name code). - Removed redundant H5P_get() calls in B-tree routines. - Redefine H5T datatype macros internally to the library, to avoid calling H5check redundantly. - Keep dataspace information for dataset locally instead of reading from disk each time. Added new module to track open objects in a file, to allow this (which will be useful eventually for some FPH5 metadata caching issues). - Remove H5AC_find macro which was inlining metadata cache lookups, and call function instead. - Remove redundant memset() calls from H5G_namei() routine. - Remove redundant checking of object type when locating objects in metadata cache and rely on the address only. - Create default dataset object to use when default dataset creation property list is used to create datasets, bypassing querying for all the property list values. - Use default I/O vector size when performing raw data with the default dataset transfer property list, instead of querying for I/O vector size. - Remove H5P_DEFAULT internally to the library, replacing it with more specific default property list based on the type of property list needed. - Remove redundant memset() calls in object header message (H5O*) routines. - Remove redunant memset() calls in data I/O routines. - Split free-list allocation routines into malloc() and calloc()- like routines, instead of one combined routine. - Remove lots of indirection in H5O*() routines. - Simplify metadata cache entry comparison routine (used when flushing entire cache out). - Only enable metadata cache statistics when H5AC_DEBUG is turned on, instead of always tracking them. - Simplify address comparison macro (H5F_addr_eq). - Remove redundant metadata cache entry protections during dataset creation by protecting the object header once and making all the modifications necessary for the dataset creation before unprotecting it. - Reduce # of "number of element in extent" computations performed by computing and storing the value during dataspace creation. - Simplify checking for group location's file information, when file has not been involving in file-mounting operations. - Use binary encoding for modification time, instead of ASCII. - Hoist H5HL_peek calls (to get information in a local heap) out of loops in many group routine. - Use static variable for iterators of selections, instead of dynamically allocation them each time. - Lookup & insert new entries in one step, avoiding traversing group's B-tree twice. - Fixed memory leak in H5Gget_objname_idx() routine (tangential to performance improvements, but fixed along the way). - Use free-list for reference counted strings. - Don't bother copying object names into cached group entries, since they are re-created when an object is opened. The benchmark I used to measure these results created several thousand small (2K) datasets in a file and wrote out the data for them. This is Elena's "regular.c" benchmark. These changes resulted in approximately ~4.3x speedup of the development branch when compared to the previous code in the development branch and ~1.4x speedup compared to the release branch. Additionally, these changes reduce the total memory used (code and data) by the development branch by ~800KB, bringing the development branch back into the same ballpark as the release branch. I'll send out a more detailed description of the benchmark results as a followup note. New internal API routines: Added "reference counted strings" API for tracking strings that get used by multiple owners without duplicating the strings. Added "ternary search tree" API for text->object mappings. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} Other platforms/configurations tested? FreeBSD 4.7 (sleipnir) serial & parallel Solaris 2.6 (baldric) serial
2003-01-10 01:20:03 +08:00
/* Add group to list of open objects in file */
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if(H5FO_top_incr(grp->oloc.file, grp->oloc.addr) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINC, NULL, "can't incr object ref. count")
2005-11-15 10:55:39 +08:00
if(H5FO_insert(grp->oloc.file, grp->oloc.addr, grp->shared) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINSERT, NULL, "can't insert group into list of open objects")
grp->shared->fo_count = 1;
/* Set return value */
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ret_value = grp;
done:
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if(ret_value == NULL) {
/* Check if we need to release the file-oriented symbol table info */
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if(oloc_init) {
if(H5O_close(&(grp->oloc)) < 0)
HDONE_ERROR(H5E_SYM, H5E_CLOSEERROR, NULL, "unable to release object header")
if(H5O_delete(file, dxpl_id, grp->oloc.addr) < 0)
HDONE_ERROR(H5E_SYM, H5E_CANTDELETE, NULL, "unable to delete object header")
} /* end if */
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if(grp != NULL) {
if(grp->shared != NULL)
H5FL_FREE(H5G_shared_t, grp->shared);
H5FL_FREE(H5G_t,grp);
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} /* end if */
} /* end if */
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FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_create() */
[svn-r876] Changes since 19981102 ---------------------- ./bin/snapshot Made same fix as for the release script yesterday. ./src/H5D.c ./src/H5Dprivate.h ./src/H5G.c ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5O.c ./src/H5Oprivate.h ./src/H5RA.c ./src/H5RAprivate.h ./src/H5T.c ./src/H5Tprivate.h Improved object type checking. Instead of determining the object type by trying to open each of the possible types, we keep a table of associations between object type number (like H5G_GROUP, H5G_DATASET, H5D_TYPE, and H5D_RAGGED) and an `isa' function that returns true if the object header has the right messages to make the object a particular type. This mechanism also allows specialization of object types by permitting an object to satisfy more than one `isa' function. Added `isa' functions for groups, datasets, ragged arrays, and committed data types. ./src/H5config.h.in Added HAVE_STAT_ST_BLOCKS. I thought this had already been added, but apparently not. ./tools/h5ls.c Removed system include files since they're already included by H5private.h and since I wasn't including them portably anyway. By default, 1-byte integer types are printed as integer values instead of ASCII characters. However, the `-s' or `--string' command-line switch causes the data to be interpretted as ASCII. String data types are always printed as character data. Ragged arrays are now identified as ragged arrays and h5ls doesn't descend into the group automatically. This uses the new object type specialization stuff. ./tools/h5tools.c ./tools/h5tools.h Added the ability to print 1-byte integer types as either ASCII or numeric data instead of always ASCII. The default is to print as numeric data.
1998-11-06 04:28:34 +08:00
/*-------------------------------------------------------------------------
* Function: H5G_open
*
* Purpose: Opens an existing group. The group should eventually be
* closed by calling H5G_close().
*
* Return: Success: Ptr to a new group.
*
* Failure: NULL
*
* Programmer: Robb Matzke
* Monday, January 5, 1998
*
*-------------------------------------------------------------------------
*/
H5G_t *
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H5G_open(H5G_loc_t *loc, hid_t dxpl_id)
{
H5G_t *grp = NULL;
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H5G_shared_t *shared_fo = NULL;
H5G_t *ret_value = NULL;
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FUNC_ENTER_NOAPI(H5G_open, NULL)
/* Check args */
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HDassert(loc);
/* Allocate the group structure */
if(NULL == (grp = H5FL_CALLOC(H5G_t)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "can't allocate space for group")
/* Shallow copy (take ownership) of the group location object */
if(H5O_loc_copy(&(grp->oloc), loc->oloc, H5_COPY_SHALLOW) < 0)
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HGOTO_ERROR(H5E_SYM, H5E_CANTCOPY, NULL, "can't copy object location")
if(H5G_name_copy(&(grp->path), loc->path, H5_COPY_SHALLOW) < 0)
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HGOTO_ERROR(H5E_SYM, H5E_CANTCOPY, NULL, "can't copy path")
/* Check if group was already open */
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if((shared_fo = H5FO_opened(grp->oloc.file, grp->oloc.addr)) == NULL) {
/* Clear any errors from H5FO_opened() */
H5E_clear_stack(NULL);
/* Open the group object */
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if(H5G_open_oid(grp, dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, NULL, "not found")
/* Add group to list of open objects in file */
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if(H5FO_insert(grp->oloc.file, grp->oloc.addr, grp->shared) < 0) {
H5FL_FREE(H5G_shared_t, grp->shared);
HGOTO_ERROR(H5E_SYM, H5E_CANTINSERT, NULL, "can't insert group into list of open objects")
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} /* end if */
/* Increment object count for the object in the top file */
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if(H5FO_top_incr(grp->oloc.file, grp->oloc.addr) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINC, NULL, "can't increment object count")
/* Set open object count */
grp->shared->fo_count = 1;
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} /* end if */
else {
/* Point to shared group info */
grp->shared = shared_fo;
/* Increment shared reference count */
shared_fo->fo_count++;
/* Check if the object has been opened through the top file yet */
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if(H5FO_top_count(grp->oloc.file, grp->oloc.addr) == 0) {
/* Open the object through this top file */
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if(H5O_open(&(grp->oloc)) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTOPENOBJ, NULL, "unable to open object header")
} /* end if */
/* Increment object count for the object in the top file */
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if(H5FO_top_incr(grp->oloc.file, grp->oloc.addr) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINC, NULL, "can't increment object count")
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} /* end else */
/* Set return value */
ret_value = grp;
done:
if (!ret_value && grp)
H5FL_FREE(H5G_t,grp);
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FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_open() */
/*-------------------------------------------------------------------------
* Function: H5G_open_oid
*
* Purpose: Opens an existing group. The group should eventually be
* closed by calling H5G_close().
*
* Return: Success: Ptr to a new group.
*
* Failure: NULL
*
* Programmer: Quincey Koziol
* Wednesday, March 17, 1999
*
*-------------------------------------------------------------------------
*/
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static herr_t
H5G_open_oid(H5G_t *grp, hid_t dxpl_id)
{
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hbool_t obj_opened = FALSE;
herr_t ret_value = SUCCEED;
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FUNC_ENTER_NOAPI_NOINIT(H5G_open_oid)
/* Check args */
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HDassert(grp);
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/* Allocate the shared information for the group */
if(NULL == (grp->shared = H5FL_CALLOC(H5G_shared_t)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
/* Grab the object header */
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if(H5O_open(&(grp->oloc)) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTOPENOBJ, FAIL, "unable to open group")
obj_opened = TRUE;
/* Check if this object has the right message(s) to be treated as a group */
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if(H5O_exists(&(grp->oloc), H5O_STAB_ID, 0, dxpl_id) <= 0
&& H5O_exists(&(grp->oloc), H5O_LINFO_ID, 0, dxpl_id) <= 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTOPENOBJ, FAIL, "not a group")
done:
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if(ret_value < 0) {
if(obj_opened)
H5O_close(&(grp->oloc));
if(grp->shared)
H5FL_FREE(H5G_shared_t, grp->shared);
} /* end if */
2005-11-15 10:55:39 +08:00
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_open_oid() */
/*-------------------------------------------------------------------------
* Function: H5G_close
*
* Purpose: Closes the specified group.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Monday, January 5, 1998
*
*-------------------------------------------------------------------------
*/
herr_t
H5G_close(H5G_t *grp)
{
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herr_t ret_value = SUCCEED; /* Return value */
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FUNC_ENTER_NOAPI(H5G_close, FAIL)
/* Check args */
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HDassert(grp && grp->shared);
HDassert(grp->shared->fo_count > 0);
--grp->shared->fo_count;
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if(0 == grp->shared->fo_count) {
HDassert(grp != H5G_rootof(H5G_fileof(grp)));
/* Remove the group from the list of opened objects in the file */
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if(H5FO_top_decr(grp->oloc.file, grp->oloc.addr) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTRELEASE, FAIL, "can't decrement count for object")
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if(H5FO_delete(grp->oloc.file, H5AC_dxpl_id, grp->oloc.addr) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTRELEASE, FAIL, "can't remove group from list of open objects")
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if(H5O_close(&(grp->oloc)) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to close")
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H5FL_FREE(H5G_shared_t, grp->shared);
} else {
/* Decrement the ref. count for this object in the top file */
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if(H5FO_top_decr(grp->oloc.file, grp->oloc.addr) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTRELEASE, FAIL, "can't decrement count for object")
/* Check reference count for this object in the top file */
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if(H5FO_top_count(grp->oloc.file, grp->oloc.addr) == 0)
if(H5O_close(&(grp->oloc)) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to close")
/* If this group is a mount point and the mount point is the last open
* reference to the group, then attempt to close down the file hierarchy
*/
if(grp->shared->mounted && grp->shared->fo_count == 1) {
/* Attempt to close down the file hierarchy */
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if(H5F_try_close(grp->oloc.file) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTCLOSEFILE, FAIL, "problem attempting file close")
} /* end if */
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} /* end else */
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if(H5G_name_free(&(grp->path)) < 0) {
H5FL_FREE(H5G_t,grp);
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "can't free group entry name")
} /* end if */
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H5FL_FREE(H5G_t,grp);
done:
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FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_close() */
/*-------------------------------------------------------------------------
* Function: H5G_free
*
* Purpose: Free memory used by an H5G_t struct (and its H5G_shared_t).
* Does not close the group or decrement the reference count.
* Used to free memory used by the root group.
*
* Return: Success: Non-negative
* Failure: Negative
*
* Programmer: James Laird
* Tuesday, September 7, 2004
*
*-------------------------------------------------------------------------
*/
herr_t
H5G_free(H5G_t *grp)
{
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herr_t ret_value = SUCCEED; /* Return value */
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FUNC_ENTER_NOAPI(H5G_free, FAIL)
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HDassert(grp && grp->shared);
H5FL_FREE(H5G_shared_t, grp->shared);
H5FL_FREE(H5G_t, grp);
done:
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FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_free() */
/*-------------------------------------------------------------------------
* Function: H5G_rootof
*
* Purpose: Return a pointer to the root group of the file. If the file
* is part of a virtual file then the root group of the virtual
* file is returned.
*
* Return: Success: Ptr to the root group of the file. Do not
* free the pointer -- it points directly into
* the file struct.
[svn-r129] Changes since 19970916 ---------------------- ./config/depend.in Fixed backslashes in sed script because the H5Gnode.c dependency info was disappearing. You'll have to rerun config.status to rebuild the Makefiles unless you use gnu make. ./config/conclude.in Also removes emacs backup files, TAGS, and svf backup files. ./config/linux Grouped gcc flags and added provisions for debugging vs. production. ./html/H5.format.html Updated messages 0x0008, 0x0009, and 0x000A. ./html/storage.html Documentation describing storage schemes. ./src/Makefile.in ./test/Makefile.in New source files. ./src/H5A.c ./src/H5Apublic.h ./src/H5C.c Changed VOIDP to void* in a couple places. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Bprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h ./src/H5H.c ./src/H5O.c Removed `const' from some variables because H5G_node_found() wanted to modify it's udata argument. Removing const there caused it to cascade to these other locations. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5H.c ./src/H5O.c Added an extra argument to H5AC_find_f() and H5AC_protect(). This arg gets passed to the load() method. Also added an extra argument to the H5AC_find() macro. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra argument passed to the sizeof_rkey() method. ./src/H5Fprivate.c ./src/H5Fistore.c (new) Added indexed I/O operations. ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h Beginning to add H5G_open/close and related bug fixes. ./src/H5Oprivate.h ./src/H5Oistore.c (new) Added the H5O_ISTORE messsage (0x0008) for indexed storage of objects. ./src/H5private.h Added extra braces around both sides of the FUNC_ENTER() and FUNC_LEAVE() macros so FUNC_ENTER() can appear before declarations or after executable statements the second case is used by H5G_namei() to initialize output arguments to sane values before FUNC_ENTER() might return failure. int f () { int decl1; printf ("This happens before FUNC_ENTER()\n"); FUNC_ENTER (...); int another_declaration; ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra arguments for key encoding and decoding. ./src/H5E.c ./src/H5Epublic.h ./src/H5Fistore.c ./src/H5Oistore.c ./src/H5Oprivate.h Indexed, chunked, sparse storage (not ready for general consumption yet). ./src/H5V.c (new) ./src/H5Vprivate.h (new) ./test/hyperslab.c (new) Vector, array, and hyperslab functions. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Fistore.c ./src/H5Gnode.c ./src/H5V.c ./src/H5Vprivate.h ./test/hyperslab.c Added functionality for indexed storage. ./src/H5F.c Fixed problems with seek optimizing. Recommend we disable it until we can implement it in the file/address class since all of HDF5 must be aware of it. ./src/H5O.c Fixed comeent speling erorr :-) ./MANIFEST Added new files. ./config/conclude.in Added the word `Testing' to the test cases. So if a test program is called hyperslab then the make output will contain the line `Testing hyperslab'. ./config/linux The default file I/O library is Posix section 2 on my linux machine so I can do some I/O performance testing. ./src/H5C.c ./src/H5Cprivate.h ./src/H5Cpublic.h Added ability to set size of indexed-storage B-tree. ./src/H5D.c ./src/H5E.c ./src/H5Epublic.h ./src/H5F.c ./src/H5Fprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5Gshad.c ./src/H5Gstab.c ./test/stab.c Changed `directory' to `group' in numerous places. ./src/H5private.h The FILELIB constant can be set on the compile command-line. ./src/istore.c NEW Tests for indexed storage.
1997-10-21 07:14:35 +08:00
*
* Failure: NULL
[svn-r129] Changes since 19970916 ---------------------- ./config/depend.in Fixed backslashes in sed script because the H5Gnode.c dependency info was disappearing. You'll have to rerun config.status to rebuild the Makefiles unless you use gnu make. ./config/conclude.in Also removes emacs backup files, TAGS, and svf backup files. ./config/linux Grouped gcc flags and added provisions for debugging vs. production. ./html/H5.format.html Updated messages 0x0008, 0x0009, and 0x000A. ./html/storage.html Documentation describing storage schemes. ./src/Makefile.in ./test/Makefile.in New source files. ./src/H5A.c ./src/H5Apublic.h ./src/H5C.c Changed VOIDP to void* in a couple places. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Bprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h ./src/H5H.c ./src/H5O.c Removed `const' from some variables because H5G_node_found() wanted to modify it's udata argument. Removing const there caused it to cascade to these other locations. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5H.c ./src/H5O.c Added an extra argument to H5AC_find_f() and H5AC_protect(). This arg gets passed to the load() method. Also added an extra argument to the H5AC_find() macro. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra argument passed to the sizeof_rkey() method. ./src/H5Fprivate.c ./src/H5Fistore.c (new) Added indexed I/O operations. ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h Beginning to add H5G_open/close and related bug fixes. ./src/H5Oprivate.h ./src/H5Oistore.c (new) Added the H5O_ISTORE messsage (0x0008) for indexed storage of objects. ./src/H5private.h Added extra braces around both sides of the FUNC_ENTER() and FUNC_LEAVE() macros so FUNC_ENTER() can appear before declarations or after executable statements the second case is used by H5G_namei() to initialize output arguments to sane values before FUNC_ENTER() might return failure. int f () { int decl1; printf ("This happens before FUNC_ENTER()\n"); FUNC_ENTER (...); int another_declaration; ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra arguments for key encoding and decoding. ./src/H5E.c ./src/H5Epublic.h ./src/H5Fistore.c ./src/H5Oistore.c ./src/H5Oprivate.h Indexed, chunked, sparse storage (not ready for general consumption yet). ./src/H5V.c (new) ./src/H5Vprivate.h (new) ./test/hyperslab.c (new) Vector, array, and hyperslab functions. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Fistore.c ./src/H5Gnode.c ./src/H5V.c ./src/H5Vprivate.h ./test/hyperslab.c Added functionality for indexed storage. ./src/H5F.c Fixed problems with seek optimizing. Recommend we disable it until we can implement it in the file/address class since all of HDF5 must be aware of it. ./src/H5O.c Fixed comeent speling erorr :-) ./MANIFEST Added new files. ./config/conclude.in Added the word `Testing' to the test cases. So if a test program is called hyperslab then the make output will contain the line `Testing hyperslab'. ./config/linux The default file I/O library is Posix section 2 on my linux machine so I can do some I/O performance testing. ./src/H5C.c ./src/H5Cprivate.h ./src/H5Cpublic.h Added ability to set size of indexed-storage B-tree. ./src/H5D.c ./src/H5E.c ./src/H5Epublic.h ./src/H5F.c ./src/H5Fprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5Gshad.c ./src/H5Gstab.c ./test/stab.c Changed `directory' to `group' in numerous places. ./src/H5private.h The FILELIB constant can be set on the compile command-line. ./src/istore.c NEW Tests for indexed storage.
1997-10-21 07:14:35 +08:00
*
* Programmer: Robb Matzke
* Tuesday, October 13, 1998
[svn-r129] Changes since 19970916 ---------------------- ./config/depend.in Fixed backslashes in sed script because the H5Gnode.c dependency info was disappearing. You'll have to rerun config.status to rebuild the Makefiles unless you use gnu make. ./config/conclude.in Also removes emacs backup files, TAGS, and svf backup files. ./config/linux Grouped gcc flags and added provisions for debugging vs. production. ./html/H5.format.html Updated messages 0x0008, 0x0009, and 0x000A. ./html/storage.html Documentation describing storage schemes. ./src/Makefile.in ./test/Makefile.in New source files. ./src/H5A.c ./src/H5Apublic.h ./src/H5C.c Changed VOIDP to void* in a couple places. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Bprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h ./src/H5H.c ./src/H5O.c Removed `const' from some variables because H5G_node_found() wanted to modify it's udata argument. Removing const there caused it to cascade to these other locations. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5H.c ./src/H5O.c Added an extra argument to H5AC_find_f() and H5AC_protect(). This arg gets passed to the load() method. Also added an extra argument to the H5AC_find() macro. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra argument passed to the sizeof_rkey() method. ./src/H5Fprivate.c ./src/H5Fistore.c (new) Added indexed I/O operations. ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h Beginning to add H5G_open/close and related bug fixes. ./src/H5Oprivate.h ./src/H5Oistore.c (new) Added the H5O_ISTORE messsage (0x0008) for indexed storage of objects. ./src/H5private.h Added extra braces around both sides of the FUNC_ENTER() and FUNC_LEAVE() macros so FUNC_ENTER() can appear before declarations or after executable statements the second case is used by H5G_namei() to initialize output arguments to sane values before FUNC_ENTER() might return failure. int f () { int decl1; printf ("This happens before FUNC_ENTER()\n"); FUNC_ENTER (...); int another_declaration; ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra arguments for key encoding and decoding. ./src/H5E.c ./src/H5Epublic.h ./src/H5Fistore.c ./src/H5Oistore.c ./src/H5Oprivate.h Indexed, chunked, sparse storage (not ready for general consumption yet). ./src/H5V.c (new) ./src/H5Vprivate.h (new) ./test/hyperslab.c (new) Vector, array, and hyperslab functions. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Fistore.c ./src/H5Gnode.c ./src/H5V.c ./src/H5Vprivate.h ./test/hyperslab.c Added functionality for indexed storage. ./src/H5F.c Fixed problems with seek optimizing. Recommend we disable it until we can implement it in the file/address class since all of HDF5 must be aware of it. ./src/H5O.c Fixed comeent speling erorr :-) ./MANIFEST Added new files. ./config/conclude.in Added the word `Testing' to the test cases. So if a test program is called hyperslab then the make output will contain the line `Testing hyperslab'. ./config/linux The default file I/O library is Posix section 2 on my linux machine so I can do some I/O performance testing. ./src/H5C.c ./src/H5Cprivate.h ./src/H5Cpublic.h Added ability to set size of indexed-storage B-tree. ./src/H5D.c ./src/H5E.c ./src/H5Epublic.h ./src/H5F.c ./src/H5Fprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5Gshad.c ./src/H5Gstab.c ./test/stab.c Changed `directory' to `group' in numerous places. ./src/H5private.h The FILELIB constant can be set on the compile command-line. ./src/istore.c NEW Tests for indexed storage.
1997-10-21 07:14:35 +08:00
*
*-------------------------------------------------------------------------
*/
2005-11-15 10:55:39 +08:00
H5G_t *
H5G_rootof(H5F_t *f)
[svn-r129] Changes since 19970916 ---------------------- ./config/depend.in Fixed backslashes in sed script because the H5Gnode.c dependency info was disappearing. You'll have to rerun config.status to rebuild the Makefiles unless you use gnu make. ./config/conclude.in Also removes emacs backup files, TAGS, and svf backup files. ./config/linux Grouped gcc flags and added provisions for debugging vs. production. ./html/H5.format.html Updated messages 0x0008, 0x0009, and 0x000A. ./html/storage.html Documentation describing storage schemes. ./src/Makefile.in ./test/Makefile.in New source files. ./src/H5A.c ./src/H5Apublic.h ./src/H5C.c Changed VOIDP to void* in a couple places. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Bprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h ./src/H5H.c ./src/H5O.c Removed `const' from some variables because H5G_node_found() wanted to modify it's udata argument. Removing const there caused it to cascade to these other locations. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5B.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5H.c ./src/H5O.c Added an extra argument to H5AC_find_f() and H5AC_protect(). This arg gets passed to the load() method. Also added an extra argument to the H5AC_find() macro. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra argument passed to the sizeof_rkey() method. ./src/H5Fprivate.c ./src/H5Fistore.c (new) Added indexed I/O operations. ./src/H5G.c ./src/H5Gnode.c ./src/H5Gprivate.h Beginning to add H5G_open/close and related bug fixes. ./src/H5Oprivate.h ./src/H5Oistore.c (new) Added the H5O_ISTORE messsage (0x0008) for indexed storage of objects. ./src/H5private.h Added extra braces around both sides of the FUNC_ENTER() and FUNC_LEAVE() macros so FUNC_ENTER() can appear before declarations or after executable statements the second case is used by H5G_namei() to initialize output arguments to sane values before FUNC_ENTER() might return failure. int f () { int decl1; printf ("This happens before FUNC_ENTER()\n"); FUNC_ENTER (...); int another_declaration; ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c Extra arguments for key encoding and decoding. ./src/H5E.c ./src/H5Epublic.h ./src/H5Fistore.c ./src/H5Oistore.c ./src/H5Oprivate.h Indexed, chunked, sparse storage (not ready for general consumption yet). ./src/H5V.c (new) ./src/H5Vprivate.h (new) ./test/hyperslab.c (new) Vector, array, and hyperslab functions. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Fistore.c ./src/H5Gnode.c ./src/H5V.c ./src/H5Vprivate.h ./test/hyperslab.c Added functionality for indexed storage. ./src/H5F.c Fixed problems with seek optimizing. Recommend we disable it until we can implement it in the file/address class since all of HDF5 must be aware of it. ./src/H5O.c Fixed comeent speling erorr :-) ./MANIFEST Added new files. ./config/conclude.in Added the word `Testing' to the test cases. So if a test program is called hyperslab then the make output will contain the line `Testing hyperslab'. ./config/linux The default file I/O library is Posix section 2 on my linux machine so I can do some I/O performance testing. ./src/H5C.c ./src/H5Cprivate.h ./src/H5Cpublic.h Added ability to set size of indexed-storage B-tree. ./src/H5D.c ./src/H5E.c ./src/H5Epublic.h ./src/H5F.c ./src/H5Fprivate.h ./src/H5G.c ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5Gshad.c ./src/H5Gstab.c ./test/stab.c Changed `directory' to `group' in numerous places. ./src/H5private.h The FILELIB constant can be set on the compile command-line. ./src/istore.c NEW Tests for indexed storage.
1997-10-21 07:14:35 +08:00
{
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FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5G_rootof)
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while(f->mtab.parent)
f = f->mtab.parent;
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FUNC_LEAVE_NOAPI(f->shared->root_grp)
} /* end H5G_rootof() */
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
1997-08-13 06:44:46 +08:00
/*-------------------------------------------------------------------------
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* Function: H5G_oloc
*
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* Purpose: Returns a pointer to the object location for a group.
*
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* Return: Success: Ptr to group entry
* Failure: NULL
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
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*
* Programmer: Robb Matzke
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* Tuesday, March 24, 1998
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
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*
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*-------------------------------------------------------------------------
*/
H5O_loc_t *
H5G_oloc(H5G_t *grp)
{
/* Use FUNC_ENTER_NOAPI_NOINIT_NOFUNC here to avoid performance issues */
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5G_oloc)
FUNC_LEAVE_NOAPI(grp ? &(grp->oloc) : NULL)
} /* end H5G_oloc() */
/*-------------------------------------------------------------------------
* Function: H5G_nameof
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
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*
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* Purpose: Returns a pointer to the hier. name for a group.
*
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* Return: Success: Ptr to hier. name
* Failure: NULL
*
* Programmer: Quincey Koziol
* Monday, September 12, 2005
*
*-------------------------------------------------------------------------
*/
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H5G_name_t *
H5G_nameof(H5G_t *grp)
[svn-r25] ./src/H5AC.c We sort the cache before a complete flush because it might be more efficient to write things back to disk in order of increasing address. If you want the old way then undef the SORT_BY_ADDR constant at the top of H5AC.c I haven't determined which systems and I/O libraries this helps or hurts. (This is currently off because of a bug I need to track down that causes qsort() to run for a really long time). ./src/H5B.c Fixed a couple more bugs. ./src/H5Eprivate.h ./src/H5Eproto.h Added major H5E_DIRECTORY and minor H5E_EXISTS, H5E_COMPLEN. ./src/H5G.c Added directory-aware functions. The heap and B-tree are created when a directory is created instead of when the first symbol is added. This simplifies symbol table entry caching for the directory since the cached value never changes now. ./src/H5Gnode.c ./src/H5Gprivate.h Fine tuned the B-tree K values for symbol tables assuming an average number of symbols is about 100 per directory. The tuning minimizes storage space. Fixed a return value in H5G_node_cmp(). ./src/H5H.c ./src/H5Hprivate.h Moved some macros the the header file. ./src/H5O.c ./src/H5Ocont.c ./src/H5Onull.c ./src/H5Ostab.c Changed the arguments for the decode method for messages. The second argument is the raw message size. Added a class variable for native message size. Added H5O_reset() to free memory used internally by a message. ./src/H5Oname.c NEW ./src/H5Oprivate.h ./src/Makefile The object name message. ./src/hdf5port.h Added defn for HDstrdup()
1997-08-13 06:44:46 +08:00
{
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/* Use FUNC_ENTER_NOAPI_NOINIT_NOFUNC here to avoid performance issues */
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5G_nameof)
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FUNC_LEAVE_NOAPI(grp ? &(grp->path) : NULL)
} /* end H5G_nameof() */
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/*-------------------------------------------------------------------------
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* Function: H5G_fileof
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*
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* Purpose: Returns the file to which the specified group belongs.
*
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* Return: Success: File pointer.
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*
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* Failure: NULL
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*
* Programmer: Robb Matzke
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* Tuesday, March 24, 1998
1997-07-31 05:17:56 +08:00
*
*-------------------------------------------------------------------------
*/
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H5F_t *
H5G_fileof(H5G_t *grp)
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{
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/* Use FUNC_ENTER_NOAPI_NOINIT_NOFUNC here to avoid performance issues */
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5G_fileof)
[svn-r15] ./src/H5AC.c ./src/H5ACprivate.h ./src/H5ACproto.h ./src/H5Bproto.h ./src/H5Gproto.h ./src/H5Hproto.h ./src/H5MFprivate.h ./src/H5MFproto.h ./src/H5MM.c ./src/H5MMprivate.h ./src/H5MMproto.h Changed my e-mail address. ./src/H5O.c NEW ./src/H5Onull.c NEW ./src/H5Ocont. NEW ./src/H5Ostab.c NEW New functions for dealing with object headers. The H5O.c is the generic stuff, and each particular message has a source file for the specific stuff. Use ./src/H5Ostab.c as a model for implementing other messages. ./src/Makefile ./src/test/Makefile Added new files ./src/debug.c Added debugging calls for object headers. ./src/H5B.c ./src/H5Bprivate.h ./src/H5Gnode.c ./src/H5MF.c Changed my e-mail address. Improved error handling. ./src/H5Eprivate.h ./src/H5Eproto.h Added more error symbols ./src/H5F.c Changed my e-mail address. Used macros for sizeof offsets and lengths. Added the interface initialization function to H5F_block_read() and H5F_block_write(). Updated H5F_debug() ./src/H5Fprivate.h Got rid of H5F_symbol_table_size(). Use H5G_SIZEOF_ENTRY() instead. Reformatted H5F_decode_offset() for readability. ./src/H5G.c Changed my e-mail address. Improved error handling. Replaced not_implemented_yet__*() with real functions from H5O. ./src/H5Gprivate.h Changed `symtab' to `stab' to be consistent with other stuff. ./src/H5H.c ./src/H5Hprivate.h Changed my e-mail address. Improved error handling. Added an extra argument to H5H_new() to indicate whether you want a global heap or a local heap. ./src/hdf5gen.h Added NELMTS() Fixed FUNC_ENTER() Rewrote FUNC_LEAVE() in terms of HRETURN(). ./src/hdf5meta.h Added `const' to the decode macros. ./src/hdf5pabl.h Added PABLO_SAVE() ./test/testhdf5.c ./test/testhdf5.h Added calls for object header testing. ./test/theap.c Turned off some output.
1997-08-08 03:23:00 +08:00
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HDassert(grp);
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FUNC_LEAVE_NOAPI(grp->oloc.file)
} /* end H5G_fileof() */
/*-------------------------------------------------------------------------
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* Function: H5G_insert_cb
*
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* Purpose: Path traversal callback for inserting an object in a group.
*
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* Return: Non-negative on success/Negative on failure
*
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* Programmer: Quincey Koziol
* Tuesday, September 13, 2005
*
*-------------------------------------------------------------------------
*/
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static herr_t
H5G_insert_cb(H5G_loc_t *grp_loc/*in*/, const char *name, const H5O_link_t UNUSED *lnk,
H5G_loc_t *obj_loc, void *_udata/*in,out*/)
{
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H5G_trav_ud7_t *udata = (H5G_trav_ud7_t *)_udata; /* User data passed in */
herr_t ret_value = SUCCEED; /* Return value */
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FUNC_ENTER_NOAPI_NOINIT(H5G_insert_cb)
/* Check for object using name already */
if(obj_loc != NULL)
HGOTO_ERROR(H5E_SYM, H5E_EXISTS, FAIL, "name already exists")
/* Insert object into group */
if(H5G_loc_insert(grp_loc, name, udata->obj_loc, TRUE, udata->dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINSERT, FAIL, "unable to insert name")
done:
if(ret_value < 0) {
/* Release the group location for the object */
/* (Group traversal callbacks are responsible for either taking ownership
* of the group location for the object, or freeing it. - QAK)
*/
if(obj_loc)
H5G_loc_free(obj_loc);
} /* end if */
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_insert_cb() */
/*-------------------------------------------------------------------------
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* Function: H5G_insert
*
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* Purpose: Inserts a symbol table entry into the group graph.
*
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* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
2005-11-15 10:55:39 +08:00
* Friday, September 19, 1997
*
*-------------------------------------------------------------------------
*/
2005-11-15 10:55:39 +08:00
herr_t
H5G_insert(H5G_loc_t *loc, const char *name, H5G_loc_t *obj_loc, hid_t dxpl_id, H5P_genplist_t *oc_plist)
{
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H5G_trav_ud7_t udata; /* User data for callback routine */
unsigned target_flags = H5G_TARGET_NORMAL;
herr_t ret_value = SUCCEED; /* Return value */
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FUNC_ENTER_NOAPI(H5G_insert, FAIL)
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/* Check args. */
HDassert(loc);
HDassert(name && *name);
HDassert(obj_loc);
/* Check for intermediate group creation flag present */
if(oc_plist != NULL) {
unsigned crt_intmd_group;
if(H5P_get(oc_plist, H5G_CRT_INTERMEDIATE_GROUP_NAME, &crt_intmd_group) < 0)
HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get property value for creating missing groups")
if (crt_intmd_group > 0)
target_flags |= H5G_CRT_INTMD_GROUP;
} /* end if */
/* Set up user data callback for path traversal */
udata.obj_loc = obj_loc;
udata.dxpl_id = dxpl_id;
/*
* Lookup and insert the name -- it shouldn't exist yet.
*/
if(H5G_traverse(loc, name, target_flags, H5G_insert_cb, &udata, dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_EXISTS, FAIL, "can't insert object in group")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_insert() */
/*-------------------------------------------------------------------------
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* Function: H5G_link_cb
*
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* Purpose: Callback for creating a link to an object.
*
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* Return: Non-negative on success/Negative on failure
*
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* Programmer: Quincey Koziol
* Monday, September 19, 2005
*
*-------------------------------------------------------------------------
*/
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static herr_t
H5G_link_cb(H5G_loc_t *grp_loc/*in*/, const char *name, const H5O_link_t UNUSED *lnk,
H5G_loc_t *obj_loc, void *_udata/*in,out*/)
{
char *old_link_name; /* Pointer to hold the old link name */
hbool_t old_link_name_set = FALSE; /* Indicate that we've replaced the old link name */
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H5G_trav_ud3_t *udata = (H5G_trav_ud3_t *)_udata; /* User data passed in */
herr_t ret_value = SUCCEED; /* Return value */
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FUNC_ENTER_NOAPI_NOINIT(H5G_link_cb)
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/* Check if the name in this group resolved to a valid location */
/* (which is not what we want) */
if(obj_loc != NULL)
HGOTO_ERROR(H5E_SYM, H5E_EXISTS, FAIL, "name already exists")
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/* Check for crossing file boundaries with a new hard link */
if(udata->lnk->type == H5G_LINK_HARD) {
/* Check that both objects are in same file */
if(grp_loc->oloc->file->shared != udata->file->shared)
HGOTO_ERROR(H5E_SYM, H5E_LINK, FAIL, "interfile hard links are not allowed")
} /* end if */
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/* Set the link's name correctly */
/* Casting away const OK -QAK */
old_link_name = udata->lnk->name;
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udata->lnk->name = name;
old_link_name_set = TRUE;
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/* Insert link into group */
if(H5G_obj_insert(grp_loc->oloc, name, udata->lnk, (hbool_t)(udata->lnk->type == H5G_LINK_HARD ? TRUE : FALSE), udata->dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to create new name/link for object")
done:
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if(ret_value < 0) {
/* Release the group location for the object */
/* (Group traversal callbacks are responsible for either taking ownership
* of the group location for the object, or freeing it. - QAK)
*/
if(obj_loc)
H5G_loc_free(obj_loc);
} /* end if */
/* Return the link's name to it's original value */
if(old_link_name_set)
udata->lnk->name = old_link_name;
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FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_link_cb() */
/*-------------------------------------------------------------------------
* Function: H5G_link_real
*
* Purpose: Creates a link at a path location
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Monday, December 5, 2005
*
*-------------------------------------------------------------------------
*/
static herr_t
H5G_link_real(H5G_loc_t *link_loc, const char *link_name, H5F_t *file,
H5O_link_t *lnk, hid_t dxpl_id)
{
H5G_trav_ud3_t udata; /* User data for callback */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5G_link_real)
/* Check args */
HDassert(link_loc);
HDassert(link_name && *link_name);
HDassert(lnk);
/* Set up user data */
udata.file = file;
udata.lnk = lnk;
udata.dxpl_id = dxpl_id;
/* Traverse the destination path & create new link */
if(H5G_traverse(link_loc, link_name, H5G_TARGET_NORMAL, H5G_link_cb, &udata, dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINSERT, FAIL, "can't insert link")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_link_real() */
/*-------------------------------------------------------------------------
* Function: H5G_link
*
* Purpose: Creates a link from NEW_NAME to CUR_NAME. See H5Glink() for
* full documentation.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Monday, April 6, 1998
*
*-------------------------------------------------------------------------
*/
static herr_t
H5G_link(H5G_loc_t *cur_loc, const char *cur_name,
H5G_loc_t *link_loc, const char *link_name,
H5G_link_t type, unsigned traverse_flags, hid_t dxpl_id)
{
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char *norm_cur_name = NULL; /* Pointer to normalized current name */
char *norm_link_name = NULL; /* Pointer to normalized link name */
H5F_t *link_file = NULL; /* Pointer to file to link to */
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H5O_link_t lnk; /* Link to insert */
herr_t ret_value = SUCCEED; /* Return value */
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FUNC_ENTER_NOAPI_NOINIT(H5G_link)
/* Check args */
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HDassert(cur_loc);
HDassert(link_loc);
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HDassert(cur_name && *cur_name);
HDassert(link_name && *link_name);
/* Get normalized copies of the current and new names */
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if((norm_cur_name = H5G_normalize(cur_name)) == NULL)
HGOTO_ERROR(H5E_SYM, H5E_BADVALUE, FAIL, "can't normalize name")
if((norm_link_name = H5G_normalize(link_name)) == NULL)
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HGOTO_ERROR(H5E_SYM, H5E_BADVALUE, FAIL, "can't normalize name")
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switch(type) {
case H5G_LINK_HARD:
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{
H5O_loc_t obj_oloc; /* Location of object to link to */
/* Get object location for object pointed to */
if(H5G_obj_find(cur_loc, norm_cur_name, traverse_flags, NULL, &obj_oloc, dxpl_id) < 0)
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HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "source object not found")
/* Construct link information for eventual insertion */
lnk.u.hard.addr = obj_oloc.addr;
/* Set destination's file information */
link_file = obj_oloc.file;
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} /* end case */
break;
case H5G_LINK_SOFT:
/* Construct link information for eventual insertion */
lnk.u.soft.name = norm_cur_name;
/* Set destination's file information */
link_file = NULL; /* no file info necessary for soft link */
break;
default:
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HGOTO_ERROR(H5E_SYM, H5E_BADVALUE, FAIL, "unrecognized link type")
} /* end switch */
/* Set up common link data */
lnk.type = type;
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#ifdef H5_HAVE_GETTIMEOFDAY
{
struct timeval now_tv;
HDgettimeofday(&now_tv, NULL);
lnk.ctime = now_tv.tv_sec;
}
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#else /* H5_HAVE_GETTIMEOFDAY */
lnk.ctime = HDtime(NULL);
#endif /* H5_HAVE_GETTIMEOFDAY */
lnk.cset = H5T_CSET_ASCII; /* XXX: Allow user to set this */
/* lnk.name = name; */ /* This will be set in callback */
/* Create actual link to the object */
if(H5G_link_real(link_loc, norm_link_name, link_file, &lnk, dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to register new name for object")
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done:
/* Free the normalized path names */
if(norm_cur_name)
H5MM_xfree(norm_cur_name);
if(norm_link_name)
H5MM_xfree(norm_link_name);
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FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_link() */
[svn-r876] Changes since 19981102 ---------------------- ./bin/snapshot Made same fix as for the release script yesterday. ./src/H5D.c ./src/H5Dprivate.h ./src/H5G.c ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5O.c ./src/H5Oprivate.h ./src/H5RA.c ./src/H5RAprivate.h ./src/H5T.c ./src/H5Tprivate.h Improved object type checking. Instead of determining the object type by trying to open each of the possible types, we keep a table of associations between object type number (like H5G_GROUP, H5G_DATASET, H5D_TYPE, and H5D_RAGGED) and an `isa' function that returns true if the object header has the right messages to make the object a particular type. This mechanism also allows specialization of object types by permitting an object to satisfy more than one `isa' function. Added `isa' functions for groups, datasets, ragged arrays, and committed data types. ./src/H5config.h.in Added HAVE_STAT_ST_BLOCKS. I thought this had already been added, but apparently not. ./tools/h5ls.c Removed system include files since they're already included by H5private.h and since I wasn't including them portably anyway. By default, 1-byte integer types are printed as integer values instead of ASCII characters. However, the `-s' or `--string' command-line switch causes the data to be interpretted as ASCII. String data types are always printed as character data. Ragged arrays are now identified as ragged arrays and h5ls doesn't descend into the group automatically. This uses the new object type specialization stuff. ./tools/h5tools.c ./tools/h5tools.h Added the ability to print 1-byte integer types as either ASCII or numeric data instead of always ASCII. The default is to print as numeric data.
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/*-------------------------------------------------------------------------
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* Function: H5G_get_objinfo_cb
[svn-r876] Changes since 19981102 ---------------------- ./bin/snapshot Made same fix as for the release script yesterday. ./src/H5D.c ./src/H5Dprivate.h ./src/H5G.c ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5O.c ./src/H5Oprivate.h ./src/H5RA.c ./src/H5RAprivate.h ./src/H5T.c ./src/H5Tprivate.h Improved object type checking. Instead of determining the object type by trying to open each of the possible types, we keep a table of associations between object type number (like H5G_GROUP, H5G_DATASET, H5D_TYPE, and H5D_RAGGED) and an `isa' function that returns true if the object header has the right messages to make the object a particular type. This mechanism also allows specialization of object types by permitting an object to satisfy more than one `isa' function. Added `isa' functions for groups, datasets, ragged arrays, and committed data types. ./src/H5config.h.in Added HAVE_STAT_ST_BLOCKS. I thought this had already been added, but apparently not. ./tools/h5ls.c Removed system include files since they're already included by H5private.h and since I wasn't including them portably anyway. By default, 1-byte integer types are printed as integer values instead of ASCII characters. However, the `-s' or `--string' command-line switch causes the data to be interpretted as ASCII. String data types are always printed as character data. Ragged arrays are now identified as ragged arrays and h5ls doesn't descend into the group automatically. This uses the new object type specialization stuff. ./tools/h5tools.c ./tools/h5tools.h Added the ability to print 1-byte integer types as either ASCII or numeric data instead of always ASCII. The default is to print as numeric data.
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*
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* Purpose: Callback for retrieving info about an object. This routine
* gets the info
[svn-r876] Changes since 19981102 ---------------------- ./bin/snapshot Made same fix as for the release script yesterday. ./src/H5D.c ./src/H5Dprivate.h ./src/H5G.c ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5O.c ./src/H5Oprivate.h ./src/H5RA.c ./src/H5RAprivate.h ./src/H5T.c ./src/H5Tprivate.h Improved object type checking. Instead of determining the object type by trying to open each of the possible types, we keep a table of associations between object type number (like H5G_GROUP, H5G_DATASET, H5D_TYPE, and H5D_RAGGED) and an `isa' function that returns true if the object header has the right messages to make the object a particular type. This mechanism also allows specialization of object types by permitting an object to satisfy more than one `isa' function. Added `isa' functions for groups, datasets, ragged arrays, and committed data types. ./src/H5config.h.in Added HAVE_STAT_ST_BLOCKS. I thought this had already been added, but apparently not. ./tools/h5ls.c Removed system include files since they're already included by H5private.h and since I wasn't including them portably anyway. By default, 1-byte integer types are printed as integer values instead of ASCII characters. However, the `-s' or `--string' command-line switch causes the data to be interpretted as ASCII. String data types are always printed as character data. Ragged arrays are now identified as ragged arrays and h5ls doesn't descend into the group automatically. This uses the new object type specialization stuff. ./tools/h5tools.c ./tools/h5tools.h Added the ability to print 1-byte integer types as either ASCII or numeric data instead of always ASCII. The default is to print as numeric data.
1998-11-06 04:28:34 +08:00
*
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* Return: Non-negative on success/Negative on failure
[svn-r876] Changes since 19981102 ---------------------- ./bin/snapshot Made same fix as for the release script yesterday. ./src/H5D.c ./src/H5Dprivate.h ./src/H5G.c ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5O.c ./src/H5Oprivate.h ./src/H5RA.c ./src/H5RAprivate.h ./src/H5T.c ./src/H5Tprivate.h Improved object type checking. Instead of determining the object type by trying to open each of the possible types, we keep a table of associations between object type number (like H5G_GROUP, H5G_DATASET, H5D_TYPE, and H5D_RAGGED) and an `isa' function that returns true if the object header has the right messages to make the object a particular type. This mechanism also allows specialization of object types by permitting an object to satisfy more than one `isa' function. Added `isa' functions for groups, datasets, ragged arrays, and committed data types. ./src/H5config.h.in Added HAVE_STAT_ST_BLOCKS. I thought this had already been added, but apparently not. ./tools/h5ls.c Removed system include files since they're already included by H5private.h and since I wasn't including them portably anyway. By default, 1-byte integer types are printed as integer values instead of ASCII characters. However, the `-s' or `--string' command-line switch causes the data to be interpretted as ASCII. String data types are always printed as character data. Ragged arrays are now identified as ragged arrays and h5ls doesn't descend into the group automatically. This uses the new object type specialization stuff. ./tools/h5tools.c ./tools/h5tools.h Added the ability to print 1-byte integer types as either ASCII or numeric data instead of always ASCII. The default is to print as numeric data.
1998-11-06 04:28:34 +08:00
*
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* Programmer: Quincey Koziol
* Tuesday, September 20, 2005
[svn-r876] Changes since 19981102 ---------------------- ./bin/snapshot Made same fix as for the release script yesterday. ./src/H5D.c ./src/H5Dprivate.h ./src/H5G.c ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5O.c ./src/H5Oprivate.h ./src/H5RA.c ./src/H5RAprivate.h ./src/H5T.c ./src/H5Tprivate.h Improved object type checking. Instead of determining the object type by trying to open each of the possible types, we keep a table of associations between object type number (like H5G_GROUP, H5G_DATASET, H5D_TYPE, and H5D_RAGGED) and an `isa' function that returns true if the object header has the right messages to make the object a particular type. This mechanism also allows specialization of object types by permitting an object to satisfy more than one `isa' function. Added `isa' functions for groups, datasets, ragged arrays, and committed data types. ./src/H5config.h.in Added HAVE_STAT_ST_BLOCKS. I thought this had already been added, but apparently not. ./tools/h5ls.c Removed system include files since they're already included by H5private.h and since I wasn't including them portably anyway. By default, 1-byte integer types are printed as integer values instead of ASCII characters. However, the `-s' or `--string' command-line switch causes the data to be interpretted as ASCII. String data types are always printed as character data. Ragged arrays are now identified as ragged arrays and h5ls doesn't descend into the group automatically. This uses the new object type specialization stuff. ./tools/h5tools.c ./tools/h5tools.h Added the ability to print 1-byte integer types as either ASCII or numeric data instead of always ASCII. The default is to print as numeric data.
1998-11-06 04:28:34 +08:00
*
*-------------------------------------------------------------------------
*/
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static herr_t
H5G_get_objinfo_cb(H5G_loc_t *grp_loc/*in*/, const char UNUSED *name, const H5O_link_t *lnk,
H5G_loc_t *obj_loc, void *_udata/*in,out*/)
[svn-r876] Changes since 19981102 ---------------------- ./bin/snapshot Made same fix as for the release script yesterday. ./src/H5D.c ./src/H5Dprivate.h ./src/H5G.c ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5O.c ./src/H5Oprivate.h ./src/H5RA.c ./src/H5RAprivate.h ./src/H5T.c ./src/H5Tprivate.h Improved object type checking. Instead of determining the object type by trying to open each of the possible types, we keep a table of associations between object type number (like H5G_GROUP, H5G_DATASET, H5D_TYPE, and H5D_RAGGED) and an `isa' function that returns true if the object header has the right messages to make the object a particular type. This mechanism also allows specialization of object types by permitting an object to satisfy more than one `isa' function. Added `isa' functions for groups, datasets, ragged arrays, and committed data types. ./src/H5config.h.in Added HAVE_STAT_ST_BLOCKS. I thought this had already been added, but apparently not. ./tools/h5ls.c Removed system include files since they're already included by H5private.h and since I wasn't including them portably anyway. By default, 1-byte integer types are printed as integer values instead of ASCII characters. However, the `-s' or `--string' command-line switch causes the data to be interpretted as ASCII. String data types are always printed as character data. Ragged arrays are now identified as ragged arrays and h5ls doesn't descend into the group automatically. This uses the new object type specialization stuff. ./tools/h5tools.c ./tools/h5tools.h Added the ability to print 1-byte integer types as either ASCII or numeric data instead of always ASCII. The default is to print as numeric data.
1998-11-06 04:28:34 +08:00
{
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H5G_trav_ud4_t *udata = (H5G_trav_ud4_t *)_udata; /* User data passed in */
herr_t ret_value = SUCCEED; /* Return value */
[svn-r876] Changes since 19981102 ---------------------- ./bin/snapshot Made same fix as for the release script yesterday. ./src/H5D.c ./src/H5Dprivate.h ./src/H5G.c ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5O.c ./src/H5Oprivate.h ./src/H5RA.c ./src/H5RAprivate.h ./src/H5T.c ./src/H5Tprivate.h Improved object type checking. Instead of determining the object type by trying to open each of the possible types, we keep a table of associations between object type number (like H5G_GROUP, H5G_DATASET, H5D_TYPE, and H5D_RAGGED) and an `isa' function that returns true if the object header has the right messages to make the object a particular type. This mechanism also allows specialization of object types by permitting an object to satisfy more than one `isa' function. Added `isa' functions for groups, datasets, ragged arrays, and committed data types. ./src/H5config.h.in Added HAVE_STAT_ST_BLOCKS. I thought this had already been added, but apparently not. ./tools/h5ls.c Removed system include files since they're already included by H5private.h and since I wasn't including them portably anyway. By default, 1-byte integer types are printed as integer values instead of ASCII characters. However, the `-s' or `--string' command-line switch causes the data to be interpretted as ASCII. String data types are always printed as character data. Ragged arrays are now identified as ragged arrays and h5ls doesn't descend into the group automatically. This uses the new object type specialization stuff. ./tools/h5tools.c ./tools/h5tools.h Added the ability to print 1-byte integer types as either ASCII or numeric data instead of always ASCII. The default is to print as numeric data.
1998-11-06 04:28:34 +08:00
2005-11-15 10:55:39 +08:00
FUNC_ENTER_NOAPI_NOINIT(H5G_get_objinfo_cb)
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/* Check if the name in this group resolved to a valid link */
if(lnk == NULL && obj_loc == NULL)
HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "name doesn't exist")
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/* Only modify user's buffer if it's available */
if(udata->statbuf) {
H5G_stat_t *statbuf = udata->statbuf; /* Convenience pointer for statbuf */
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/* Reset buffer */
HDmemset(statbuf, 0, sizeof(H5G_stat_t));
/* Common code to retrieve the file's fileno */
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/* (Use the object location's file info, if it's available) */
if(H5F_get_fileno((obj_loc ? obj_loc : grp_loc)->oloc->file, &statbuf->fileno) < 0)
HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "unable to read fileno")
/* Get common info from link */
if(lnk != NULL) {
statbuf->cset = lnk->cset;
statbuf->ctime = lnk->ctime;
} /* end if */
else {
/* lookup must be on '.' */
HDassert(HDstrcmp(name, ".") == 0);
[svn-r7489] Purpose: Update Description: A lot of modifications for the FPHDF5 stuff: H5AC.c H5ACprivate.h - Removed AC_find (it's replaced with AC_protect and AC_unprotect). Added flushing if it's an FPHDF5 driver and we're doing an AC_set or AC_unprotect with the dirty flag set. H5B.c - Split up the B_flush function into different functions since the one function was doing serialization which is better left as a separate entity. H5D.c - Removed some FPHDF5 code that was incorrect H5F.c - Split up the F_flush function so that it no longer allocates file space. Created new functions (F_init_superblock, F_read_superblock, and F_write_superblock) for greater modularity and so that the FPHDF5 non-captain processes can read the superblock after the captain process writes it. H5FD.c - Error message correction. H5FDfphdf5.c - Removed MPI barrier call that wasn't needed. H5FPclient.c H5FPserver.c - Modified so that if a process requests data that isn't exactly aligned, we can return it if we have the block that contains the requested address. H5G.c H5Gent.c H5Gnode.c H5HL.c H5HLpkg.h H5HLprivate.h H5Oefl.c - Removed the H5HL_peek function since it was doing a (now unsafe) holding of the information in the cache. Replaced with protect and unprotect calls. H5TB.c - Error fix. The TB_dless function wasn't working properly. H5Gstab.c - Format change. H5err.txt H5Edefin.h H5Einit.h H5Epubgen.h H5Eterm.h - Added new error code. Platforms tested: Modi4 (paralle, Fortran) Sol (Fortran) Linux (C++, Fortran) Copper (Parallel, Fortran) Misc. update:
2003-09-19 03:27:27 +08:00
2005-11-15 10:55:39 +08:00
/* Set "fake" hard link info */
statbuf->cset = H5T_CSET_ASCII;
statbuf->ctime = 0;
} /* end else */
[svn-r7489] Purpose: Update Description: A lot of modifications for the FPHDF5 stuff: H5AC.c H5ACprivate.h - Removed AC_find (it's replaced with AC_protect and AC_unprotect). Added flushing if it's an FPHDF5 driver and we're doing an AC_set or AC_unprotect with the dirty flag set. H5B.c - Split up the B_flush function into different functions since the one function was doing serialization which is better left as a separate entity. H5D.c - Removed some FPHDF5 code that was incorrect H5F.c - Split up the F_flush function so that it no longer allocates file space. Created new functions (F_init_superblock, F_read_superblock, and F_write_superblock) for greater modularity and so that the FPHDF5 non-captain processes can read the superblock after the captain process writes it. H5FD.c - Error message correction. H5FDfphdf5.c - Removed MPI barrier call that wasn't needed. H5FPclient.c H5FPserver.c - Modified so that if a process requests data that isn't exactly aligned, we can return it if we have the block that contains the requested address. H5G.c H5Gent.c H5Gnode.c H5HL.c H5HLpkg.h H5HLprivate.h H5Oefl.c - Removed the H5HL_peek function since it was doing a (now unsafe) holding of the information in the cache. Replaced with protect and unprotect calls. H5TB.c - Error fix. The TB_dless function wasn't working properly. H5Gstab.c - Format change. H5err.txt H5Edefin.h H5Einit.h H5Epubgen.h H5Eterm.h - Added new error code. Platforms tested: Modi4 (paralle, Fortran) Sol (Fortran) Linux (C++, Fortran) Copper (Parallel, Fortran) Misc. update:
2003-09-19 03:27:27 +08:00
2005-11-15 10:55:39 +08:00
/* Get info for soft link */
/* (If we don't follow the link, we can retrieve info about the soft link itself) */
if(!udata->follow_link && lnk && lnk->type == H5G_LINK_SOFT) {
/* Set object type */
statbuf->type = H5G_LINK;
[svn-r7489] Purpose: Update Description: A lot of modifications for the FPHDF5 stuff: H5AC.c H5ACprivate.h - Removed AC_find (it's replaced with AC_protect and AC_unprotect). Added flushing if it's an FPHDF5 driver and we're doing an AC_set or AC_unprotect with the dirty flag set. H5B.c - Split up the B_flush function into different functions since the one function was doing serialization which is better left as a separate entity. H5D.c - Removed some FPHDF5 code that was incorrect H5F.c - Split up the F_flush function so that it no longer allocates file space. Created new functions (F_init_superblock, F_read_superblock, and F_write_superblock) for greater modularity and so that the FPHDF5 non-captain processes can read the superblock after the captain process writes it. H5FD.c - Error message correction. H5FDfphdf5.c - Removed MPI barrier call that wasn't needed. H5FPclient.c H5FPserver.c - Modified so that if a process requests data that isn't exactly aligned, we can return it if we have the block that contains the requested address. H5G.c H5Gent.c H5Gnode.c H5HL.c H5HLpkg.h H5HLprivate.h H5Oefl.c - Removed the H5HL_peek function since it was doing a (now unsafe) holding of the information in the cache. Replaced with protect and unprotect calls. H5TB.c - Error fix. The TB_dless function wasn't working properly. H5Gstab.c - Format change. H5err.txt H5Edefin.h H5Einit.h H5Epubgen.h H5Eterm.h - Added new error code. Platforms tested: Modi4 (paralle, Fortran) Sol (Fortran) Linux (C++, Fortran) Copper (Parallel, Fortran) Misc. update:
2003-09-19 03:27:27 +08:00
2005-11-15 10:55:39 +08:00
/* Get length of link value */
statbuf->u.slink.linklen = HDstrlen(lnk->u.soft.name) + 1; /*count the null terminator*/
} /* end if */
/* Get info for hard link */
else {
/* Get object type */
statbuf->type = H5O_obj_type(obj_loc->oloc, udata->dxpl_id);
if(statbuf->type == H5G_UNKNOWN)
H5E_clear_stack(NULL); /* clear any errors resulting from checking type */
[svn-r7489] Purpose: Update Description: A lot of modifications for the FPHDF5 stuff: H5AC.c H5ACprivate.h - Removed AC_find (it's replaced with AC_protect and AC_unprotect). Added flushing if it's an FPHDF5 driver and we're doing an AC_set or AC_unprotect with the dirty flag set. H5B.c - Split up the B_flush function into different functions since the one function was doing serialization which is better left as a separate entity. H5D.c - Removed some FPHDF5 code that was incorrect H5F.c - Split up the F_flush function so that it no longer allocates file space. Created new functions (F_init_superblock, F_read_superblock, and F_write_superblock) for greater modularity and so that the FPHDF5 non-captain processes can read the superblock after the captain process writes it. H5FD.c - Error message correction. H5FDfphdf5.c - Removed MPI barrier call that wasn't needed. H5FPclient.c H5FPserver.c - Modified so that if a process requests data that isn't exactly aligned, we can return it if we have the block that contains the requested address. H5G.c H5Gent.c H5Gnode.c H5HL.c H5HLpkg.h H5HLprivate.h H5Oefl.c - Removed the H5HL_peek function since it was doing a (now unsafe) holding of the information in the cache. Replaced with protect and unprotect calls. H5TB.c - Error fix. The TB_dless function wasn't working properly. H5Gstab.c - Format change. H5err.txt H5Edefin.h H5Einit.h H5Epubgen.h H5Eterm.h - Added new error code. Platforms tested: Modi4 (paralle, Fortran) Sol (Fortran) Linux (C++, Fortran) Copper (Parallel, Fortran) Misc. update:
2003-09-19 03:27:27 +08:00
2005-11-15 10:55:39 +08:00
/* Get basic info for object */
statbuf->u.obj.objno = obj_loc->oloc->addr;
statbuf->u.obj.nlink = H5O_link(obj_loc->oloc, 0, udata->dxpl_id);
[svn-r7489] Purpose: Update Description: A lot of modifications for the FPHDF5 stuff: H5AC.c H5ACprivate.h - Removed AC_find (it's replaced with AC_protect and AC_unprotect). Added flushing if it's an FPHDF5 driver and we're doing an AC_set or AC_unprotect with the dirty flag set. H5B.c - Split up the B_flush function into different functions since the one function was doing serialization which is better left as a separate entity. H5D.c - Removed some FPHDF5 code that was incorrect H5F.c - Split up the F_flush function so that it no longer allocates file space. Created new functions (F_init_superblock, F_read_superblock, and F_write_superblock) for greater modularity and so that the FPHDF5 non-captain processes can read the superblock after the captain process writes it. H5FD.c - Error message correction. H5FDfphdf5.c - Removed MPI barrier call that wasn't needed. H5FPclient.c H5FPserver.c - Modified so that if a process requests data that isn't exactly aligned, we can return it if we have the block that contains the requested address. H5G.c H5Gent.c H5Gnode.c H5HL.c H5HLpkg.h H5HLprivate.h H5Oefl.c - Removed the H5HL_peek function since it was doing a (now unsafe) holding of the information in the cache. Replaced with protect and unprotect calls. H5TB.c - Error fix. The TB_dless function wasn't working properly. H5Gstab.c - Format change. H5err.txt H5Edefin.h H5Einit.h H5Epubgen.h H5Eterm.h - Added new error code. Platforms tested: Modi4 (paralle, Fortran) Sol (Fortran) Linux (C++, Fortran) Copper (Parallel, Fortran) Misc. update:
2003-09-19 03:27:27 +08:00
2005-11-15 10:55:39 +08:00
/* Get creation time for object */
if(NULL == H5O_read(obj_loc->oloc, H5O_MTIME_ID, 0, &(statbuf->u.obj.mtime), udata->dxpl_id)) {
H5E_clear_stack(NULL);
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if(NULL == H5O_read(obj_loc->oloc, H5O_MTIME_NEW_ID, 0, &(statbuf->u.obj.mtime), udata->dxpl_id)) {
H5E_clear_stack(NULL);
statbuf->u.obj.mtime = 0;
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} /* end if */
} /* end if */
/* Get object header information */
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if(H5O_get_info(obj_loc->oloc, &(statbuf->u.obj.ohdr), udata->dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTGET, FAIL, "unable to get object header information")
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} /* end else */
} /* end if */
done:
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/* Release the group location for the object */
/* (Group traversal callbacks are responsible for either taking ownership
* of the group location for the object, or freeing it. - QAK)
*/
if(obj_loc)
H5G_loc_free(obj_loc);
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FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_get_objinfo_cb() */
/*-------------------------------------------------------------------------
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* Function: H5G_get_objinfo
*
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* Purpose: Returns information about an object.
*
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* Return: Success: Non-negative with info about the object
* returned through STATBUF if it isn't the null
* pointer.
*
* Failure: Negative
*
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* Programmer: Robb Matzke
* Monday, April 13, 1998
*
*-------------------------------------------------------------------------
*/
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herr_t
H5G_get_objinfo(H5G_loc_t *loc, const char *name, hbool_t follow_link,
H5G_stat_t *statbuf/*out*/, hid_t dxpl_id)
{
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H5G_trav_ud4_t udata; /* User data for callback */
herr_t ret_value = SUCCEED; /* Return value */
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FUNC_ENTER_NOAPI(H5G_get_objinfo, FAIL)
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HDassert(loc);
HDassert(name && *name);
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/* Set up user data for retrieving information */
udata.statbuf = statbuf;
udata.follow_link = follow_link;
udata.dxpl_id = dxpl_id;
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/* Traverse the group hierarchy to locate the object to get info about */
if(H5G_traverse(loc, name, (unsigned)(follow_link ? H5G_TARGET_NORMAL : H5G_TARGET_SLINK),
H5G_get_objinfo_cb, &udata, dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_EXISTS, FAIL, "name doesn't exist")
done:
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FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_get_objinfo() */
/*-------------------------------------------------------------------------
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* Function: H5G_linkval_cb
*
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* Purpose: Callback for retrieving soft link value for an object.
*
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* Return: Non-negative on success/Negative on failure
*
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* Programmer: Quincey Koziol
* Tuesday, September 20, 2005
*
*-------------------------------------------------------------------------
*/
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static herr_t
H5G_linkval_cb(H5G_loc_t UNUSED *grp_loc/*in*/, const char UNUSED *name, const H5O_link_t *lnk,
H5G_loc_t UNUSED *obj_loc, void *_udata/*in,out*/)
{
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H5G_trav_ud5_t *udata = (H5G_trav_ud5_t *)_udata; /* User data passed in */
herr_t ret_value = SUCCEED; /* Return value */
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FUNC_ENTER_NOAPI_NOINIT(H5G_linkval_cb)
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/* Check if the name in this group resolved to a valid link */
if(lnk == NULL)
HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "name doesn't exist")
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if(H5G_LINK_SOFT != lnk->type)
HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "object is not a symbolic link")
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/* Copy to output buffer */
if(udata->size > 0 && udata->buf) {
HDstrncpy(udata->buf, lnk->u.soft.name, udata->size);
if(HDstrlen(lnk->u.soft.name) >= udata->size)
udata->buf[udata->size - 1] = '\0';
} /* end if */
done:
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/* Release the group location for the object */
/* (Group traversal callbacks are responsible for either taking ownership
* of the group location for the object, or freeing it. - QAK)
*/
if(obj_loc)
H5G_loc_free(obj_loc);
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_linkval_cb() */
/*-------------------------------------------------------------------------
* Function: H5G_linkval
*
* Purpose: Returns the value of a symbolic link.
*
[svn-r876] Changes since 19981102 ---------------------- ./bin/snapshot Made same fix as for the release script yesterday. ./src/H5D.c ./src/H5Dprivate.h ./src/H5G.c ./src/H5Gprivate.h ./src/H5Gpublic.h ./src/H5O.c ./src/H5Oprivate.h ./src/H5RA.c ./src/H5RAprivate.h ./src/H5T.c ./src/H5Tprivate.h Improved object type checking. Instead of determining the object type by trying to open each of the possible types, we keep a table of associations between object type number (like H5G_GROUP, H5G_DATASET, H5D_TYPE, and H5D_RAGGED) and an `isa' function that returns true if the object header has the right messages to make the object a particular type. This mechanism also allows specialization of object types by permitting an object to satisfy more than one `isa' function. Added `isa' functions for groups, datasets, ragged arrays, and committed data types. ./src/H5config.h.in Added HAVE_STAT_ST_BLOCKS. I thought this had already been added, but apparently not. ./tools/h5ls.c Removed system include files since they're already included by H5private.h and since I wasn't including them portably anyway. By default, 1-byte integer types are printed as integer values instead of ASCII characters. However, the `-s' or `--string' command-line switch causes the data to be interpretted as ASCII. String data types are always printed as character data. Ragged arrays are now identified as ragged arrays and h5ls doesn't descend into the group automatically. This uses the new object type specialization stuff. ./tools/h5tools.c ./tools/h5tools.h Added the ability to print 1-byte integer types as either ASCII or numeric data instead of always ASCII. The default is to print as numeric data.
1998-11-06 04:28:34 +08:00
* Return: Success: Non-negative, with at most SIZE bytes of the
* link value copied into the BUF buffer. If the
* link value is larger than SIZE characters
* counting the null terminator then the BUF
* result will not be null terminated.
*
* Failure: Negative
*
* Programmer: Robb Matzke
* Monday, April 13, 1998
*
*-------------------------------------------------------------------------
*/
static herr_t
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H5G_linkval(H5G_loc_t *loc, const char *name, size_t size, char *buf/*out*/, hid_t dxpl_id)
{
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H5G_trav_ud5_t udata; /* User data for callback */
herr_t ret_value = SUCCEED; /* Return value */
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FUNC_ENTER_NOAPI_NOINIT(H5G_linkval)
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/* Set up user data for retrieving information */
udata.size = size;
udata.buf = buf;
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/* Traverse the group hierarchy to locate the object to get info about */
if(H5G_traverse(loc, name, H5G_TARGET_SLINK, H5G_linkval_cb, &udata, dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_EXISTS, FAIL, "name doesn't exist")
[svn-r7489] Purpose: Update Description: A lot of modifications for the FPHDF5 stuff: H5AC.c H5ACprivate.h - Removed AC_find (it's replaced with AC_protect and AC_unprotect). Added flushing if it's an FPHDF5 driver and we're doing an AC_set or AC_unprotect with the dirty flag set. H5B.c - Split up the B_flush function into different functions since the one function was doing serialization which is better left as a separate entity. H5D.c - Removed some FPHDF5 code that was incorrect H5F.c - Split up the F_flush function so that it no longer allocates file space. Created new functions (F_init_superblock, F_read_superblock, and F_write_superblock) for greater modularity and so that the FPHDF5 non-captain processes can read the superblock after the captain process writes it. H5FD.c - Error message correction. H5FDfphdf5.c - Removed MPI barrier call that wasn't needed. H5FPclient.c H5FPserver.c - Modified so that if a process requests data that isn't exactly aligned, we can return it if we have the block that contains the requested address. H5G.c H5Gent.c H5Gnode.c H5HL.c H5HLpkg.h H5HLprivate.h H5Oefl.c - Removed the H5HL_peek function since it was doing a (now unsafe) holding of the information in the cache. Replaced with protect and unprotect calls. H5TB.c - Error fix. The TB_dless function wasn't working properly. H5Gstab.c - Format change. H5err.txt H5Edefin.h H5Einit.h H5Epubgen.h H5Eterm.h - Added new error code. Platforms tested: Modi4 (paralle, Fortran) Sol (Fortran) Linux (C++, Fortran) Copper (Parallel, Fortran) Misc. update:
2003-09-19 03:27:27 +08:00
done:
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FUNC_LEAVE_NOAPI(ret_value)
} /* H5G_linkval() */
/*-------------------------------------------------------------------------
* Function: H5G_set_comment
*
* Purpose: (Re)sets the comment for an object.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Monday, July 20, 1998
*
*-------------------------------------------------------------------------
*/
static herr_t
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H5G_set_comment(H5G_loc_t *loc, const char *name, const char *buf, hid_t dxpl_id)
{
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H5O_loc_t obj_oloc; /* Object's location */
H5O_name_t comment;
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herr_t ret_value = SUCCEED; /* Return value */
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FUNC_ENTER_NOAPI_NOINIT(H5G_set_comment)
/* Get the symbol table entry for the object */
if(H5G_obj_find(loc, name, H5G_TARGET_NORMAL, NULL, &obj_oloc/*out*/, dxpl_id) < 0)
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HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "object not found")
/* Remove the previous comment message if any */
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if(H5O_remove(&obj_oloc, H5O_NAME_ID, 0, TRUE, dxpl_id) < 0)
H5E_clear_stack(NULL);
/* Add the new message */
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if(buf && *buf) {
/* Casting away const OK -QAK */
comment.s = (char *)buf;
if(H5O_modify(&obj_oloc, H5O_NAME_ID, H5O_NEW_MESG, 0, H5O_UPDATE_TIME, &comment, dxpl_id) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTINIT, FAIL, "unable to set comment object header message")
} /* end if */
done:
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FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_set_comment() */
/*-------------------------------------------------------------------------
* Function: H5G_get_comment
*
* Purpose: Get the comment value for an object.
*
[svn-r537] Changes since 19980722 ---------------------- ./src/H5A.c ./src/H5Apublic.h ./test/tattr.c Switched the order of the second and third argument of H5Aget_name() to make it consistent with other functions that take buffers and buffer sizes. ./src/H5G.c ./src/H5Gpublic.h ./src/H5Gprivate.h The H5Gget_comment() function returns the size of the comment including the null terminator. If the object has no comment then zero is returned. If an error occurs then a negative value is returned. ./MANIFEST ./tools/Makefile.in ./tools/h5tools.h [NEW] ./tools/h5dump.c [NEW] Created a library for printing values of datasets in a way that looks nice. It's not done yet, but I needed it for debugging the contents of files from Jim Reus. ./tools/h5ls.c Added the `-d' and `--dump' options which cause the contents of a dataset to be printed. Added `-w N' and `--width=N' options to control how wide the raw data output should be. If you want single-column output then say `-w1'. Printing dataset values can now handle datasets of any integer or floating point atomic type. As a special case, integers which are one byte wide are treated a character strings for now. Sample output: $ h5ls --dump --width=60 banana.hdf ARCHIVE 0:0:0:744 Dataset {52/Inf} Data: (0) "U struct complex { double R; double I; };\012V" (43) " double;\012" U 0:0:0:2500 Dataset {256/512} Data: printing of compound data types is not implemented yet V 0:0:0:3928 Dataset {256/512} Data: (0) 0, 0.015625, 0.03125, 0.046875, 0.0625, (5) 0.078125, 0.09375, 0.109375, 0.125, 0.140625, (10) 0.15625, 0.171875, 0.1875, 0.203125, 0.21875, (15) 0.234375, 0.25, 0.265625, 0.28125, 0.296875, ...
1998-07-24 05:19:17 +08:00
* Return: Success: Number of bytes in the comment including the
* null terminator. Zero if the object has no
* comment.
*
* Failure: Negative
*
* Programmer: Robb Matzke
* Monday, July 20, 1998
*
*-------------------------------------------------------------------------
*/
static int
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H5G_get_comment(H5G_loc_t *loc, const char *name, size_t bufsize, char *buf, hid_t dxpl_id)
{
H5O_name_t comment;
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H5O_loc_t obj_oloc; /* Object's location */
int ret_value; /* Return value */
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FUNC_ENTER_NOAPI_NOINIT(H5G_get_comment)
/* Get the symbol table entry for the object */
if(H5G_obj_find(loc, name, H5G_TARGET_NORMAL, NULL, &obj_oloc/*out*/, dxpl_id) < 0)
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HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "object not found")
/* Get the message */
comment.s = NULL;
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if(NULL == H5O_read(&obj_oloc, H5O_NAME_ID, 0, &comment, dxpl_id)) {
if(buf && bufsize > 0)
buf[0] = '\0';
ret_value = 0;
} else {
if(buf && bufsize)
HDstrncpy(buf, comment.s, bufsize);
ret_value = (int)HDstrlen(comment.s);
H5O_reset(H5O_NAME_ID, &comment);
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} /* end else */
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_get_comment() */
/*-------------------------------------------------------------------------
* Function: H5G_unlink_cb
*
* Purpose: Callback for unlinking an object. This routine
* deletes the link
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Monday, September 19, 2005
*
*-------------------------------------------------------------------------
*/
static herr_t
H5G_unlink_cb(H5G_loc_t *grp_loc/*in*/, const char *name, const H5O_link_t UNUSED *lnk,
H5G_loc_t *obj_loc, void *_udata/*in,out*/)
{
H5G_trav_ud6_t *udata = (H5G_trav_ud6_t *)_udata; /* User data passed in */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5G_unlink_cb)
/* Check if the name in this group resolved to a valid link */
if(obj_loc == NULL)
HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "name doesn't exist")
/* Check for removing '.' */
if(lnk == NULL)
HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "can't delete self")
/* Remove the link from the group */
if(H5G_loc_remove(grp_loc, name, obj_loc, udata->dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTDELETE, FAIL, "unable to unlink name from group")
done:
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/* Release the group location for the object */
/* (Group traversal callbacks are responsible for either taking ownership
* of the group location for the object, or freeing it. - QAK)
*/
if(obj_loc)
H5G_loc_free(obj_loc);
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FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_unlink_cb() */
/*-------------------------------------------------------------------------
* Function: H5G_unlink
*
* Purpose: Unlink a name from a group.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Thursday, September 17, 1998
*
*-------------------------------------------------------------------------
*/
static herr_t
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H5G_unlink(H5G_loc_t *loc, const char *name, hid_t dxpl_id)
{
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H5G_trav_ud6_t udata; /* User data for callback */
char *norm_name = NULL; /* Pointer to normalized name */
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herr_t ret_value = SUCCEED; /* Return value */
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FUNC_ENTER_NOAPI_NOINIT(H5G_unlink)
/* Sanity check */
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HDassert(loc);
HDassert(name && *name);
/* Get normalized copy of the name */
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if((norm_name = H5G_normalize(name)) == NULL)
HGOTO_ERROR(H5E_SYM, H5E_BADVALUE, FAIL, "can't normalize name")
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/* Set up user data for creating soft link */
udata.dxpl_id = dxpl_id;
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if(H5G_traverse(loc, norm_name, H5G_TARGET_SLINK|H5G_TARGET_MOUNT, H5G_unlink_cb, &udata, dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_EXISTS, FAIL, "name doesn't exist")
done:
/* Free the normalized path name */
if(norm_name)
H5MM_xfree(norm_name);
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FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_unlink() */
/*-------------------------------------------------------------------------
* Function: H5G_move_cb
*
* Purpose: Callback for moving an object. This routine replaces the
* names of open objects with the moved object in the path
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Monday, September 19, 2005
*
*-------------------------------------------------------------------------
*/
static herr_t
H5G_move_cb(H5G_loc_t UNUSED *grp_loc/*in*/, const char UNUSED *name, const H5O_link_t UNUSED *lnk,
H5G_loc_t *obj_loc, void *_udata/*in,out*/)
{
H5G_trav_ud2_t *udata = (H5G_trav_ud2_t *)_udata; /* User data passed in */
H5RS_str_t *dst_name_r = NULL; /* Ref-counted version of dest name */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5G_move_cb)
/* Check if the name in this group resolved to a valid link */
if(obj_loc == NULL)
HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "name doesn't exist")
/* Fix names up */
dst_name_r = H5RS_wrap(udata->dst_name);
HDassert(dst_name_r);
if(H5G_name_replace(udata->type, obj_loc, dst_name_r, udata->dst_loc, H5G_NAME_MOVE) < 0)
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HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to replace name ")
done:
/* Cleanup */
if(dst_name_r)
H5RS_decr(dst_name_r);
/* Release the group location for the object */
/* (Group traversal callbacks are responsible for either taking ownership
* of the group location for the object, or freeing it. - QAK)
*/
if(obj_loc)
H5G_loc_free(obj_loc);
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_move_cb() */
/*-------------------------------------------------------------------------
* Function: H5G_move
*
* Purpose: Atomically rename an object.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Friday, September 25, 1998
*
*-------------------------------------------------------------------------
*/
static herr_t
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H5G_move(H5G_loc_t *src_loc, const char *src_name, H5G_loc_t *dst_loc,
const char *dst_name, hid_t dxpl_id)
{
H5O_loc_t src_oloc; /* Location of object linked to */
H5O_link_t lnk; /* Link information for object to move */
hbool_t link_valid = FALSE; /* Flag to indicate that the link information is valid */
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H5G_trav_ud2_t udata; /* User data for traversal */
herr_t ret_value = SUCCEED; /* Return value */
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FUNC_ENTER_NOAPI_NOINIT(H5G_move)
/* Sanity check */
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HDassert(src_loc);
HDassert(dst_loc);
HDassert(src_name && *src_name);
HDassert(dst_name && *dst_name);
/* Get copy of link to move */
if(H5G_obj_find(src_loc, src_name, (H5G_TARGET_MOUNT|H5G_TARGET_SLINK), &lnk, &src_oloc, dxpl_id) < 0)
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HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "object not found")
link_valid = TRUE;
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/* Release name for link (it will have a new name in destination) */
lnk.name = H5MM_xfree(lnk.name);
/* Create new link to the object */
if(H5G_link_real(dst_loc, dst_name, src_oloc.file, &lnk, dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to register new name for object")
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/* Set up user data for name replacement */
/* Get object type */
switch(lnk.type) {
case H5G_LINK_HARD:
if(H5G_UNKNOWN == (udata.type = H5O_obj_type(&src_oloc, dxpl_id)))
HGOTO_ERROR(H5E_SYM, H5E_CANTGET, FAIL, "unable to get object type to move")
break;
case H5G_LINK_SOFT:
udata.type = H5G_LINK;
break;
default:
HGOTO_ERROR(H5E_SYM, H5E_BADVALUE, FAIL, "unrecognized link type")
} /* end switch */
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udata.dst_name = dst_name;
udata.dst_loc = dst_loc;
/* Search the open ID list and replace names for the move operation
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*/
if(H5G_traverse(src_loc, src_name, H5G_TARGET_MOUNT|H5G_TARGET_SLINK, H5G_move_cb, &udata, dxpl_id) < 0)
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HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "unable to follow symbolic link")
/* Remove the old name */
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if(H5G_unlink(src_loc, src_name, dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, FAIL, "unable to unlink old object name")
done:
/* If there's valid information in the link, reset it */
if(link_valid)
H5O_reset(H5O_LINK_ID, &lnk);
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FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_move() */
/*-------------------------------------------------------------------------
* Function: H5G_insertion_file_cb
*
* Purpose: Callback for finding insertion file. This routine sets the
* correct information for the file pointer to return.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Monday, September 19, 2005
*
*-------------------------------------------------------------------------
*/
static herr_t
H5G_insertion_file_cb(H5G_loc_t *grp_loc/*in*/, const char UNUSED *name, const H5O_link_t UNUSED *lnk,
H5G_loc_t *obj_loc, void *_udata/*in,out*/)
{
H5G_trav_ud1_t *udata = (H5G_trav_ud1_t *)_udata; /* User data passed in */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5G_insertion_file_cb)
/* Check if the name in this group resolves to a valid location */
/* (which is not what we want) */
if(obj_loc != NULL)
HGOTO_ERROR(H5E_SYM, H5E_EXISTS, FAIL, "name already exists")
/* Get file pointer for location */
udata->file = grp_loc->oloc->file;
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_insertion_file_cb() */
/*-------------------------------------------------------------------------
* Function: H5G_insertion_file
*
* Purpose: Given a location and name that specifies a not-yet-existing
* object return the file into which the object is about to be
* inserted.
*
* Return: Success: File pointer
*
* Failure: NULL
*
* Programmer: Robb Matzke
* Wednesday, October 14, 1998
*
*-------------------------------------------------------------------------
*/
H5F_t *
2005-11-15 10:55:39 +08:00
H5G_insertion_file(H5G_loc_t *loc, const char *name, hid_t dxpl_id)
{
H5F_t *ret_value; /* Return value */
2005-11-15 10:55:39 +08:00
FUNC_ENTER_NOAPI(H5G_insertion_file, NULL)
[svn-r6252] Purpose: Lots of performance improvements & a couple new internal API interfaces. Description: Performance Improvements: - Cached file offset & length sizes in shared file struct, to avoid constantly looking them up in the FCPL. - Generic property improvements: - Added "revision" number to generic property classes to speed up comparisons. - Changed method of storing properties from using a hash-table to the TBBT routines in the library. - Share the propery names between classes and the lists derived from them. - Removed redundant 'def_value' buffer from each property. - Switching code to use a "copy on write" strategy for properties in each list, where the properties in each list are shared with the properties in the class, until a property's value is changed in a list. - Fixed error in layout code which was allocating too many buffers. - Redefined public macros of the form (H5open()/H5check, <variable>) internally to only be (<variable>), avoiding innumerable useless calls to H5open() and H5check_version(). - Reuse already zeroed buffers in H5F_contig_fill instead of constantly re-zeroing them. - Don't write fill values if writing entire dataset. - Use gettimeofday() system call instead of time() system when checking the modification time of a dataset. - Added reference counted string API and use it for tracking the names of objects opening in a file (for the ID->name code). - Removed redundant H5P_get() calls in B-tree routines. - Redefine H5T datatype macros internally to the library, to avoid calling H5check redundantly. - Keep dataspace information for dataset locally instead of reading from disk each time. Added new module to track open objects in a file, to allow this (which will be useful eventually for some FPH5 metadata caching issues). - Remove H5AC_find macro which was inlining metadata cache lookups, and call function instead. - Remove redundant memset() calls from H5G_namei() routine. - Remove redundant checking of object type when locating objects in metadata cache and rely on the address only. - Create default dataset object to use when default dataset creation property list is used to create datasets, bypassing querying for all the property list values. - Use default I/O vector size when performing raw data with the default dataset transfer property list, instead of querying for I/O vector size. - Remove H5P_DEFAULT internally to the library, replacing it with more specific default property list based on the type of property list needed. - Remove redundant memset() calls in object header message (H5O*) routines. - Remove redunant memset() calls in data I/O routines. - Split free-list allocation routines into malloc() and calloc()- like routines, instead of one combined routine. - Remove lots of indirection in H5O*() routines. - Simplify metadata cache entry comparison routine (used when flushing entire cache out). - Only enable metadata cache statistics when H5AC_DEBUG is turned on, instead of always tracking them. - Simplify address comparison macro (H5F_addr_eq). - Remove redundant metadata cache entry protections during dataset creation by protecting the object header once and making all the modifications necessary for the dataset creation before unprotecting it. - Reduce # of "number of element in extent" computations performed by computing and storing the value during dataspace creation. - Simplify checking for group location's file information, when file has not been involving in file-mounting operations. - Use binary encoding for modification time, instead of ASCII. - Hoist H5HL_peek calls (to get information in a local heap) out of loops in many group routine. - Use static variable for iterators of selections, instead of dynamically allocation them each time. - Lookup & insert new entries in one step, avoiding traversing group's B-tree twice. - Fixed memory leak in H5Gget_objname_idx() routine (tangential to performance improvements, but fixed along the way). - Use free-list for reference counted strings. - Don't bother copying object names into cached group entries, since they are re-created when an object is opened. The benchmark I used to measure these results created several thousand small (2K) datasets in a file and wrote out the data for them. This is Elena's "regular.c" benchmark. These changes resulted in approximately ~4.3x speedup of the development branch when compared to the previous code in the development branch and ~1.4x speedup compared to the release branch. Additionally, these changes reduce the total memory used (code and data) by the development branch by ~800KB, bringing the development branch back into the same ballpark as the release branch. I'll send out a more detailed description of the benchmark results as a followup note. New internal API routines: Added "reference counted strings" API for tracking strings that get used by multiple owners without duplicating the strings. Added "ternary search tree" API for text->object mappings. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} Other platforms/configurations tested? FreeBSD 4.7 (sleipnir) serial & parallel Solaris 2.6 (baldric) serial
2003-01-10 01:20:03 +08:00
2005-11-15 10:55:39 +08:00
HDassert(loc);
HDassert(name && *name);
[svn-r6252] Purpose: Lots of performance improvements & a couple new internal API interfaces. Description: Performance Improvements: - Cached file offset & length sizes in shared file struct, to avoid constantly looking them up in the FCPL. - Generic property improvements: - Added "revision" number to generic property classes to speed up comparisons. - Changed method of storing properties from using a hash-table to the TBBT routines in the library. - Share the propery names between classes and the lists derived from them. - Removed redundant 'def_value' buffer from each property. - Switching code to use a "copy on write" strategy for properties in each list, where the properties in each list are shared with the properties in the class, until a property's value is changed in a list. - Fixed error in layout code which was allocating too many buffers. - Redefined public macros of the form (H5open()/H5check, <variable>) internally to only be (<variable>), avoiding innumerable useless calls to H5open() and H5check_version(). - Reuse already zeroed buffers in H5F_contig_fill instead of constantly re-zeroing them. - Don't write fill values if writing entire dataset. - Use gettimeofday() system call instead of time() system when checking the modification time of a dataset. - Added reference counted string API and use it for tracking the names of objects opening in a file (for the ID->name code). - Removed redundant H5P_get() calls in B-tree routines. - Redefine H5T datatype macros internally to the library, to avoid calling H5check redundantly. - Keep dataspace information for dataset locally instead of reading from disk each time. Added new module to track open objects in a file, to allow this (which will be useful eventually for some FPH5 metadata caching issues). - Remove H5AC_find macro which was inlining metadata cache lookups, and call function instead. - Remove redundant memset() calls from H5G_namei() routine. - Remove redundant checking of object type when locating objects in metadata cache and rely on the address only. - Create default dataset object to use when default dataset creation property list is used to create datasets, bypassing querying for all the property list values. - Use default I/O vector size when performing raw data with the default dataset transfer property list, instead of querying for I/O vector size. - Remove H5P_DEFAULT internally to the library, replacing it with more specific default property list based on the type of property list needed. - Remove redundant memset() calls in object header message (H5O*) routines. - Remove redunant memset() calls in data I/O routines. - Split free-list allocation routines into malloc() and calloc()- like routines, instead of one combined routine. - Remove lots of indirection in H5O*() routines. - Simplify metadata cache entry comparison routine (used when flushing entire cache out). - Only enable metadata cache statistics when H5AC_DEBUG is turned on, instead of always tracking them. - Simplify address comparison macro (H5F_addr_eq). - Remove redundant metadata cache entry protections during dataset creation by protecting the object header once and making all the modifications necessary for the dataset creation before unprotecting it. - Reduce # of "number of element in extent" computations performed by computing and storing the value during dataspace creation. - Simplify checking for group location's file information, when file has not been involving in file-mounting operations. - Use binary encoding for modification time, instead of ASCII. - Hoist H5HL_peek calls (to get information in a local heap) out of loops in many group routine. - Use static variable for iterators of selections, instead of dynamically allocation them each time. - Lookup & insert new entries in one step, avoiding traversing group's B-tree twice. - Fixed memory leak in H5Gget_objname_idx() routine (tangential to performance improvements, but fixed along the way). - Use free-list for reference counted strings. - Don't bother copying object names into cached group entries, since they are re-created when an object is opened. The benchmark I used to measure these results created several thousand small (2K) datasets in a file and wrote out the data for them. This is Elena's "regular.c" benchmark. These changes resulted in approximately ~4.3x speedup of the development branch when compared to the previous code in the development branch and ~1.4x speedup compared to the release branch. Additionally, these changes reduce the total memory used (code and data) by the development branch by ~800KB, bringing the development branch back into the same ballpark as the release branch. I'll send out a more detailed description of the benchmark results as a followup note. New internal API routines: Added "reference counted strings" API for tracking strings that get used by multiple owners without duplicating the strings. Added "ternary search tree" API for text->object mappings. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} Other platforms/configurations tested? FreeBSD 4.7 (sleipnir) serial & parallel Solaris 2.6 (baldric) serial
2003-01-10 01:20:03 +08:00
/* Check if the location the object will be inserted into is part of a
* file mounting chain (either a parent or a child) and perform a more
* rigorous determination of the location's file (which traverses into
* mounted files, etc.).
*/
2005-11-15 10:55:39 +08:00
if(H5F_has_mount(loc->oloc->file) || H5F_is_mount(loc->oloc->file)) {
H5G_trav_ud1_t udata; /* User data for traversal */
[svn-r6252] Purpose: Lots of performance improvements & a couple new internal API interfaces. Description: Performance Improvements: - Cached file offset & length sizes in shared file struct, to avoid constantly looking them up in the FCPL. - Generic property improvements: - Added "revision" number to generic property classes to speed up comparisons. - Changed method of storing properties from using a hash-table to the TBBT routines in the library. - Share the propery names between classes and the lists derived from them. - Removed redundant 'def_value' buffer from each property. - Switching code to use a "copy on write" strategy for properties in each list, where the properties in each list are shared with the properties in the class, until a property's value is changed in a list. - Fixed error in layout code which was allocating too many buffers. - Redefined public macros of the form (H5open()/H5check, <variable>) internally to only be (<variable>), avoiding innumerable useless calls to H5open() and H5check_version(). - Reuse already zeroed buffers in H5F_contig_fill instead of constantly re-zeroing them. - Don't write fill values if writing entire dataset. - Use gettimeofday() system call instead of time() system when checking the modification time of a dataset. - Added reference counted string API and use it for tracking the names of objects opening in a file (for the ID->name code). - Removed redundant H5P_get() calls in B-tree routines. - Redefine H5T datatype macros internally to the library, to avoid calling H5check redundantly. - Keep dataspace information for dataset locally instead of reading from disk each time. Added new module to track open objects in a file, to allow this (which will be useful eventually for some FPH5 metadata caching issues). - Remove H5AC_find macro which was inlining metadata cache lookups, and call function instead. - Remove redundant memset() calls from H5G_namei() routine. - Remove redundant checking of object type when locating objects in metadata cache and rely on the address only. - Create default dataset object to use when default dataset creation property list is used to create datasets, bypassing querying for all the property list values. - Use default I/O vector size when performing raw data with the default dataset transfer property list, instead of querying for I/O vector size. - Remove H5P_DEFAULT internally to the library, replacing it with more specific default property list based on the type of property list needed. - Remove redundant memset() calls in object header message (H5O*) routines. - Remove redunant memset() calls in data I/O routines. - Split free-list allocation routines into malloc() and calloc()- like routines, instead of one combined routine. - Remove lots of indirection in H5O*() routines. - Simplify metadata cache entry comparison routine (used when flushing entire cache out). - Only enable metadata cache statistics when H5AC_DEBUG is turned on, instead of always tracking them. - Simplify address comparison macro (H5F_addr_eq). - Remove redundant metadata cache entry protections during dataset creation by protecting the object header once and making all the modifications necessary for the dataset creation before unprotecting it. - Reduce # of "number of element in extent" computations performed by computing and storing the value during dataspace creation. - Simplify checking for group location's file information, when file has not been involving in file-mounting operations. - Use binary encoding for modification time, instead of ASCII. - Hoist H5HL_peek calls (to get information in a local heap) out of loops in many group routine. - Use static variable for iterators of selections, instead of dynamically allocation them each time. - Lookup & insert new entries in one step, avoiding traversing group's B-tree twice. - Fixed memory leak in H5Gget_objname_idx() routine (tangential to performance improvements, but fixed along the way). - Use free-list for reference counted strings. - Don't bother copying object names into cached group entries, since they are re-created when an object is opened. The benchmark I used to measure these results created several thousand small (2K) datasets in a file and wrote out the data for them. This is Elena's "regular.c" benchmark. These changes resulted in approximately ~4.3x speedup of the development branch when compared to the previous code in the development branch and ~1.4x speedup compared to the release branch. Additionally, these changes reduce the total memory used (code and data) by the development branch by ~800KB, bringing the development branch back into the same ballpark as the release branch. I'll send out a more detailed description of the benchmark results as a followup note. New internal API routines: Added "reference counted strings" API for tracking strings that get used by multiple owners without duplicating the strings. Added "ternary search tree" API for text->object mappings. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} Other platforms/configurations tested? FreeBSD 4.7 (sleipnir) serial & parallel Solaris 2.6 (baldric) serial
2003-01-10 01:20:03 +08:00
/*
* Look up the name to get the containing group and to make sure the name
* doesn't already exist.
*/
2005-11-15 10:55:39 +08:00
if(H5G_traverse(loc, name, H5G_TARGET_NORMAL, H5G_insertion_file_cb, &udata, dxpl_id) < 0)
HGOTO_ERROR(H5E_SYM, H5E_EXISTS, NULL, "name already exists")
[svn-r6252] Purpose: Lots of performance improvements & a couple new internal API interfaces. Description: Performance Improvements: - Cached file offset & length sizes in shared file struct, to avoid constantly looking them up in the FCPL. - Generic property improvements: - Added "revision" number to generic property classes to speed up comparisons. - Changed method of storing properties from using a hash-table to the TBBT routines in the library. - Share the propery names between classes and the lists derived from them. - Removed redundant 'def_value' buffer from each property. - Switching code to use a "copy on write" strategy for properties in each list, where the properties in each list are shared with the properties in the class, until a property's value is changed in a list. - Fixed error in layout code which was allocating too many buffers. - Redefined public macros of the form (H5open()/H5check, <variable>) internally to only be (<variable>), avoiding innumerable useless calls to H5open() and H5check_version(). - Reuse already zeroed buffers in H5F_contig_fill instead of constantly re-zeroing them. - Don't write fill values if writing entire dataset. - Use gettimeofday() system call instead of time() system when checking the modification time of a dataset. - Added reference counted string API and use it for tracking the names of objects opening in a file (for the ID->name code). - Removed redundant H5P_get() calls in B-tree routines. - Redefine H5T datatype macros internally to the library, to avoid calling H5check redundantly. - Keep dataspace information for dataset locally instead of reading from disk each time. Added new module to track open objects in a file, to allow this (which will be useful eventually for some FPH5 metadata caching issues). - Remove H5AC_find macro which was inlining metadata cache lookups, and call function instead. - Remove redundant memset() calls from H5G_namei() routine. - Remove redundant checking of object type when locating objects in metadata cache and rely on the address only. - Create default dataset object to use when default dataset creation property list is used to create datasets, bypassing querying for all the property list values. - Use default I/O vector size when performing raw data with the default dataset transfer property list, instead of querying for I/O vector size. - Remove H5P_DEFAULT internally to the library, replacing it with more specific default property list based on the type of property list needed. - Remove redundant memset() calls in object header message (H5O*) routines. - Remove redunant memset() calls in data I/O routines. - Split free-list allocation routines into malloc() and calloc()- like routines, instead of one combined routine. - Remove lots of indirection in H5O*() routines. - Simplify metadata cache entry comparison routine (used when flushing entire cache out). - Only enable metadata cache statistics when H5AC_DEBUG is turned on, instead of always tracking them. - Simplify address comparison macro (H5F_addr_eq). - Remove redundant metadata cache entry protections during dataset creation by protecting the object header once and making all the modifications necessary for the dataset creation before unprotecting it. - Reduce # of "number of element in extent" computations performed by computing and storing the value during dataspace creation. - Simplify checking for group location's file information, when file has not been involving in file-mounting operations. - Use binary encoding for modification time, instead of ASCII. - Hoist H5HL_peek calls (to get information in a local heap) out of loops in many group routine. - Use static variable for iterators of selections, instead of dynamically allocation them each time. - Lookup & insert new entries in one step, avoiding traversing group's B-tree twice. - Fixed memory leak in H5Gget_objname_idx() routine (tangential to performance improvements, but fixed along the way). - Use free-list for reference counted strings. - Don't bother copying object names into cached group entries, since they are re-created when an object is opened. The benchmark I used to measure these results created several thousand small (2K) datasets in a file and wrote out the data for them. This is Elena's "regular.c" benchmark. These changes resulted in approximately ~4.3x speedup of the development branch when compared to the previous code in the development branch and ~1.4x speedup compared to the release branch. Additionally, these changes reduce the total memory used (code and data) by the development branch by ~800KB, bringing the development branch back into the same ballpark as the release branch. I'll send out a more detailed description of the benchmark results as a followup note. New internal API routines: Added "reference counted strings" API for tracking strings that get used by multiple owners without duplicating the strings. Added "ternary search tree" API for text->object mappings. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} Other platforms/configurations tested? FreeBSD 4.7 (sleipnir) serial & parallel Solaris 2.6 (baldric) serial
2003-01-10 01:20:03 +08:00
/* Set return value */
2005-11-15 10:55:39 +08:00
ret_value = udata.file;
[svn-r6252] Purpose: Lots of performance improvements & a couple new internal API interfaces. Description: Performance Improvements: - Cached file offset & length sizes in shared file struct, to avoid constantly looking them up in the FCPL. - Generic property improvements: - Added "revision" number to generic property classes to speed up comparisons. - Changed method of storing properties from using a hash-table to the TBBT routines in the library. - Share the propery names between classes and the lists derived from them. - Removed redundant 'def_value' buffer from each property. - Switching code to use a "copy on write" strategy for properties in each list, where the properties in each list are shared with the properties in the class, until a property's value is changed in a list. - Fixed error in layout code which was allocating too many buffers. - Redefined public macros of the form (H5open()/H5check, <variable>) internally to only be (<variable>), avoiding innumerable useless calls to H5open() and H5check_version(). - Reuse already zeroed buffers in H5F_contig_fill instead of constantly re-zeroing them. - Don't write fill values if writing entire dataset. - Use gettimeofday() system call instead of time() system when checking the modification time of a dataset. - Added reference counted string API and use it for tracking the names of objects opening in a file (for the ID->name code). - Removed redundant H5P_get() calls in B-tree routines. - Redefine H5T datatype macros internally to the library, to avoid calling H5check redundantly. - Keep dataspace information for dataset locally instead of reading from disk each time. Added new module to track open objects in a file, to allow this (which will be useful eventually for some FPH5 metadata caching issues). - Remove H5AC_find macro which was inlining metadata cache lookups, and call function instead. - Remove redundant memset() calls from H5G_namei() routine. - Remove redundant checking of object type when locating objects in metadata cache and rely on the address only. - Create default dataset object to use when default dataset creation property list is used to create datasets, bypassing querying for all the property list values. - Use default I/O vector size when performing raw data with the default dataset transfer property list, instead of querying for I/O vector size. - Remove H5P_DEFAULT internally to the library, replacing it with more specific default property list based on the type of property list needed. - Remove redundant memset() calls in object header message (H5O*) routines. - Remove redunant memset() calls in data I/O routines. - Split free-list allocation routines into malloc() and calloc()- like routines, instead of one combined routine. - Remove lots of indirection in H5O*() routines. - Simplify metadata cache entry comparison routine (used when flushing entire cache out). - Only enable metadata cache statistics when H5AC_DEBUG is turned on, instead of always tracking them. - Simplify address comparison macro (H5F_addr_eq). - Remove redundant metadata cache entry protections during dataset creation by protecting the object header once and making all the modifications necessary for the dataset creation before unprotecting it. - Reduce # of "number of element in extent" computations performed by computing and storing the value during dataspace creation. - Simplify checking for group location's file information, when file has not been involving in file-mounting operations. - Use binary encoding for modification time, instead of ASCII. - Hoist H5HL_peek calls (to get information in a local heap) out of loops in many group routine. - Use static variable for iterators of selections, instead of dynamically allocation them each time. - Lookup & insert new entries in one step, avoiding traversing group's B-tree twice. - Fixed memory leak in H5Gget_objname_idx() routine (tangential to performance improvements, but fixed along the way). - Use free-list for reference counted strings. - Don't bother copying object names into cached group entries, since they are re-created when an object is opened. The benchmark I used to measure these results created several thousand small (2K) datasets in a file and wrote out the data for them. This is Elena's "regular.c" benchmark. These changes resulted in approximately ~4.3x speedup of the development branch when compared to the previous code in the development branch and ~1.4x speedup compared to the release branch. Additionally, these changes reduce the total memory used (code and data) by the development branch by ~800KB, bringing the development branch back into the same ballpark as the release branch. I'll send out a more detailed description of the benchmark results as a followup note. New internal API routines: Added "reference counted strings" API for tracking strings that get used by multiple owners without duplicating the strings. Added "ternary search tree" API for text->object mappings. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} Other platforms/configurations tested? FreeBSD 4.7 (sleipnir) serial & parallel Solaris 2.6 (baldric) serial
2003-01-10 01:20:03 +08:00
} /* end if */
else
/* Use the location's file */
2005-11-15 10:55:39 +08:00
ret_value = loc->oloc->file;
done:
2005-11-15 10:55:39 +08:00
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_insertion_file() */
/*-------------------------------------------------------------------------
* Function: H5G_free_grp_name
*
* Purpose: Free the 'ID to name' buffers.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: August 22, 2002
*
* Comments: Used now only on the root group close, in H5F_close()
*
*-------------------------------------------------------------------------
*/
herr_t
H5G_free_grp_name(H5G_t *grp)
{
2005-11-15 10:55:39 +08:00
herr_t ret_value = SUCCEED; /* Return value */
2005-11-15 10:55:39 +08:00
FUNC_ENTER_NOAPI(H5G_free_grp_name, FAIL)
/* Check args */
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HDassert(grp && grp->shared);
HDassert(grp->shared->fo_count > 0);
2005-11-15 10:55:39 +08:00
/* Free the path */
H5G_name_free(&(grp->path));
done:
2005-11-15 10:55:39 +08:00
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_free_grp_name() */
/*-------------------------------------------------------------------------
* Function: H5G_get_shared_count
*
* Purpose: Queries the group object's "shared count"
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Tuesday, July 5, 2005
*
*-------------------------------------------------------------------------
*/
herr_t
H5G_get_shared_count(H5G_t *grp)
{
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5G_get_shared_count);
/* Check args */
HDassert(grp && grp->shared);
FUNC_LEAVE_NOAPI(grp->shared->fo_count);
} /* end H5G_get_shared_count() */
/*-------------------------------------------------------------------------
* Function: H5G_mount
*
* Purpose: Sets the 'mounted' flag for a group
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Tuesday, July 19, 2005
*
*-------------------------------------------------------------------------
*/
herr_t
H5G_mount(H5G_t *grp)
{
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5G_mount);
/* Check args */
HDassert(grp && grp->shared);
HDassert(grp->shared->mounted == FALSE);
/* Set the 'mounted' flag */
grp->shared->mounted = TRUE;
FUNC_LEAVE_NOAPI(SUCCEED);
} /* end H5G_mount() */
/*-------------------------------------------------------------------------
* Function: H5G_unmount
*
* Purpose: Resets the 'mounted' flag for a group
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Tuesday, July 19, 2005
*
*-------------------------------------------------------------------------
*/
herr_t
H5G_unmount(H5G_t *grp)
{
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5G_unmount);
/* Check args */
HDassert(grp && grp->shared);
HDassert(grp->shared->mounted == TRUE);
/* Reset the 'mounted' flag */
grp->shared->mounted = FALSE;
FUNC_LEAVE_NOAPI(SUCCEED);
} /* end H5G_unmount() */
/*-------------------------------------------------------------------------
* Function: H5G_copy
*
* Purpose: Copy an object to destination location
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Peter Cao
* June 4, 2005
*
*-------------------------------------------------------------------------
*/
static herr_t
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H5G_copy(H5G_loc_t *src_loc, H5G_loc_t *dst_loc,
const char *name_dst, hid_t plist_id)
{
H5P_genplist_t *oc_plist; /* Property list created */
hid_t dxpl_id = H5AC_dxpl_id;
2005-11-15 10:55:39 +08:00
H5G_name_t new_path; /* Copied object group hier. path */
H5O_loc_t new_oloc; /* Copied object object location */
H5G_loc_t new_loc; /* Group location of object copied */
hbool_t entry_inserted = FALSE; /* Flag to indicate that the new entry was inserted into a group */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5G_copy, FAIL);
2005-11-15 10:55:39 +08:00
HDassert(src_loc);
HDassert(src_loc->oloc->file);
HDassert(dst_loc);
HDassert(dst_loc->oloc->file);
HDassert(name_dst);
/* Get the property list */
if(NULL == (oc_plist = H5I_object(plist_id)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a property list")
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/* Set up copied object location to fill in */
new_loc.oloc = &new_oloc;
new_loc.path = &new_path;
H5G_loc_reset(&new_loc);
new_oloc.file = dst_loc->oloc->file;
/* copy the object from the source file to the destination file */
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if(H5O_copy_header(src_loc->oloc, &new_oloc, dxpl_id) < 0)
HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, FAIL, "unable to copy object")
/* Insert the new object in the destination file's group */
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if(H5G_insert(dst_loc, name_dst, &new_loc, dxpl_id, oc_plist) < 0)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINIT, FAIL, "unable to insert the name")
entry_inserted = TRUE;
done:
/* Free the ID to name buffers */
if(entry_inserted)
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H5G_loc_free(&new_loc);
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5G_copy() */
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