2002-10-01 00:35:50 +08:00
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#------------------------------------------------------------------------------
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2001-10-17 00:40:38 +08:00
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# This is the list of files that are part of HDF5 source distribution.
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# All files have a `./' prefix and appear in lexicographic order.
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# Lines that end with _DO_NOT_DISTRIBUTE_ will not be included in a
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# release. Blank lines and comments are ignored. Comments must start
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# in column one with a '#'.
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1998-09-08 21:38:29 +08:00
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#------------------------------------------------------------------------------
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2003-02-07 06:06:35 +08:00
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./.autom4te.cfg _DO_NOT_DISTRIBUTE_
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1998-07-15 13:42:11 +08:00
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./COPYING
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1998-02-17 05:26:59 +08:00
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./MANIFEST
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1998-01-30 00:31:24 +08:00
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./Makefile.dist
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1997-08-16 00:35:53 +08:00
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./Makefile.in
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2001-07-06 00:36:40 +08:00
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./README.txt
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1999-03-03 01:15:35 +08:00
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./aclocal.m4
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2003-07-29 05:38:04 +08:00
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./acsite.m4
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1998-09-08 21:38:29 +08:00
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./configure
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./configure.in
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2003-07-10 03:28:34 +08:00
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./bin/buildhdf5
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1998-09-08 21:38:29 +08:00
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./bin/checkapi _DO_NOT_DISTRIBUTE_
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./bin/checkposix _DO_NOT_DISTRIBUTE_
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2003-07-23 09:29:18 +08:00
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./bin/chkcopyright _DO_NOT_DISTRIBUTE_
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1999-10-27 03:34:29 +08:00
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./bin/chkmanifest
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1997-08-16 00:35:53 +08:00
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./bin/config.guess
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./bin/config.sub
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1999-10-02 02:00:02 +08:00
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./bin/config_para_ibm_sp.sh
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1998-09-08 21:38:29 +08:00
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./bin/debug-ohdr _DO_NOT_DISTRIBUTE_
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2001-08-02 05:00:25 +08:00
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./bin/dependencies
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1998-03-19 02:09:16 +08:00
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./bin/distdep
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2003-09-30 22:05:57 +08:00
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./bin/errors _DO_NOT_DISTRIBUTE_
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1998-07-18 03:03:43 +08:00
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./bin/h5vers
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1997-08-16 00:35:53 +08:00
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./bin/install-sh
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1998-07-18 03:03:43 +08:00
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./bin/iostats
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2002-06-13 19:57:10 +08:00
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./bin/locate_sw
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1999-03-03 01:15:35 +08:00
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./bin/ltmain.sh
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2003-08-13 09:51:16 +08:00
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./bin/make_err
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2001-09-22 07:50:15 +08:00
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./bin/mkdirs
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1998-01-30 00:31:24 +08:00
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./bin/release
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2001-01-27 06:02:55 +08:00
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./bin/runtest _DO_NOT_DISTRIBUTE_
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1998-07-31 04:38:31 +08:00
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./bin/snapshot
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2002-03-06 22:49:10 +08:00
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./bin/snapshot_version _DO_NOT_DISTRIBUTE_
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[svn-r429] Changes since 19980616
----------------------
./html/tracing.html NEW
This entire update is to make it possible for the library to
print the name, arguments, and return value of every API call
without requiring any extra work from developers or app
programmers. This file describes how this all works.
./configure.in
Added the `--enable-tracing' switch. If you use it then the
library will include code to print API function names,
argument names and values, and function return values.
However, you must then turn on the tracing by setting the
HDF5_TRACE environment variable to a file descriptor number.
The default is `--disable-tracing' since enabling it causes a
slight increase in library size and a slowdown resulting from
an extra function call for each API function call (I couldn't
even measure the slowdown :-)
./bin/trace NEW
A perl script that synchronizes the H5TRACE() macro calls in
the *.c files with the function return type and formal
argument names and types. If you use GNU make and gcc then
this will be done automatically, otherwise just invoke this
script with the names of one or more .c files. You could do
it by hand to, but encoding argument types is a little tricky
at first.
./config/commence.in
Added the $(TRACE) macro, which defaults to the no-op.
Added -D_POSIX_SOURCE to the compiler command line.
./src/Makefile.in
Override the default for $(TRACE).
./config/depend.in
Automatically calls $(TRACE) to synchronize the H5TRACE()
macros in any source file that changed. As with makefile
dependencies, one way to force synchronization of all files is
to remove the `.depend' file.
./MANIFEST
Added new files.
./src/H5Eprivate.h
Modified HRETURN_ERROR() and HRETURN() for tracing.
./src/H5.c
./src/H5private.h
This is where the real tracing work really happens, in
H5_trace().
./src/H5A.c
./src/H5D.c
./src/H5G.c
./src/H5P.c
./src/H5S.c
./src/H5Z.c
Added H5TRACE() calls to all API functions. You don't really
need these changes if you don't want to merge your stuff
because they can be generated automatically by going to the
hdf5/src directory and saying ../bin/trace *.c
./src/H5T.c
Added H5TRACE() calls. Other stuff below.
./src/H5E.c
./src/H5Epublic.h
Added H5TRACE() calls. Created a type H5E_auto_t for the
`func' argument of H5Eset_auto() and H5Eget_auto() to make
those arguments easier to parse for tracing. It should also
make it clearer for users that don't know how to read
complicated ANSI data types.
./src/H5F.c
Added H5TRACE() calls. Changed a couple `uintn' argument
types in API functions to `unsigned int' since `uintn' part of
the API. Changed a few "can't" and "cant" error messages to
"unable to".
./src/H5Ipublic.h
Removed H5_DIRECTORY from the H5I_group_t enum. It wasn't
used anywhere.
./src/H5Tconv.c
Removed an unused label.
./src/H5Fistore.c
./src/H5Oattr.c
./src/H5Odtype.c
./src/H5T.c
./test/dsets.c
./test/dtypes.c
Fixed a warning about a variable possibly used before it's
initialized. Added __unused__ to turn off some unused
argument warnings that pop up when debugging is turned off and
optimizations are turned on.
1998-06-18 04:46:29 +08:00
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./bin/trace
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1998-09-08 21:38:29 +08:00
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1998-04-03 11:29:38 +08:00
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./config/BlankForm
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1997-08-16 00:35:53 +08:00
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./config/commence.in
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./config/conclude.in
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1999-03-05 04:22:42 +08:00
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./config/dec-flags
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1999-03-03 01:15:35 +08:00
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./config/dec-osf4.x
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2001-04-16 23:26:43 +08:00
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./config/dec-osf5.x
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1999-11-01 23:21:16 +08:00
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./config/depend1.in
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./config/depend2.in
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./config/depend3.in
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./config/depend4.in
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./config/dependN.in
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1999-02-16 01:38:04 +08:00
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./config/freebsd
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1999-03-05 04:22:42 +08:00
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./config/gnu-flags
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1998-02-11 00:38:55 +08:00
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./config/hpux10.20
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2000-06-22 00:38:05 +08:00
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./config/hpux11.00
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1998-09-24 23:51:05 +08:00
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./config/hpux9.03
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2000-02-19 09:01:55 +08:00
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./config/i386-pc-cygwin32
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2003-04-03 00:53:07 +08:00
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./config/ia64-linux-gnu
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1998-03-14 01:50:38 +08:00
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./config/intel-osf1
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1999-03-03 01:15:35 +08:00
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./config/irix5.x
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1999-01-29 08:16:36 +08:00
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./config/irix6.x
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1999-03-03 01:15:35 +08:00
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./config/linux-gnu
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2003-03-20 00:03:40 +08:00
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./config/linux-gnuaout
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1999-03-03 01:15:35 +08:00
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./config/linux-gnulibc1
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./config/linux-gnulibc2
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2004-01-07 04:54:55 +08:00
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./config/powerpc-apple
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1999-03-13 02:35:04 +08:00
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./config/powerpc-ibm-aix4.x
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2002-06-30 07:41:03 +08:00
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./config/powerpc-ibm-aix5.x
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1999-03-13 02:35:04 +08:00
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./config/rs6000-ibm-aix4.x
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./config/solaris2.x
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2001-01-25 22:56:19 +08:00
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./config/sv1-cray
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2000-06-07 21:59:49 +08:00
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./config/unicos
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2003-04-16 06:25:09 +08:00
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./config/unicos10.0.X
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1999-02-23 23:42:30 +08:00
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./config/unicosmk
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2000-12-02 23:11:16 +08:00
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./config/unicosmk2.0.X
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2000-12-14 00:54:33 +08:00
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./config/unicosmk2.0.5.X
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2003-05-07 07:16:23 +08:00
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./config/unicosmk2.0.6.X
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1998-09-08 21:38:29 +08:00
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2000-10-04 06:25:09 +08:00
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./config/site-specific/BlankForm
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1999-10-16 07:22:10 +08:00
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./doc/Makefile.in
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2000-12-22 04:40:13 +08:00
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1998-07-09 00:48:48 +08:00
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./doc/html/Attributes.html
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./doc/html/Big.html
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./doc/html/Caching.html
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1998-10-23 23:44:02 +08:00
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./doc/html/Chunking.html
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./doc/html/Chunk_f1.gif
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./doc/html/Chunk_f1.obj _DO_NOT_DISTRIBUTE_
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./doc/html/Chunk_f2.gif
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./doc/html/Chunk_f2.obj _DO_NOT_DISTRIBUTE_
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./doc/html/Chunk_f3.gif
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./doc/html/Chunk_f4.gif
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./doc/html/Chunk_f5.gif
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./doc/html/Chunk_f6.gif
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./doc/html/Chunk_f6.obj _DO_NOT_DISTRIBUTE_
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1998-09-08 21:38:29 +08:00
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./doc/html/CodeReview.html _DO_NOT_DISTRIBUTE_
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1998-07-09 00:48:48 +08:00
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./doc/html/Coding.html
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1998-09-11 21:56:20 +08:00
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./doc/html/Copyright.html
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1998-07-09 00:48:48 +08:00
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./doc/html/Datasets.html
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./doc/html/Dataspaces.html
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./doc/html/Datatypes.html
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1999-05-07 07:04:52 +08:00
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./doc/html/DatatypesEnum.html
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1999-11-03 22:30:40 +08:00
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./doc/html/Dependencies
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1998-10-30 09:26:52 +08:00
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./doc/html/ddl.html
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1998-08-20 06:46:31 +08:00
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./doc/html/Debugging.html
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1999-05-07 07:04:52 +08:00
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./doc/html/EnumMap.gif
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1998-09-11 21:56:20 +08:00
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./doc/html/Environment.html
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1998-07-09 00:48:48 +08:00
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./doc/html/Errors.html
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1998-09-08 21:38:29 +08:00
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./doc/html/ExternalFiles.html _DO_NOT_DISTRIBUTE_
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2000-03-13 22:51:42 +08:00
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./doc/html/FF-IH_FileGroup.gif
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./doc/html/FF-IH_FileObject.gif
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1998-07-09 00:48:48 +08:00
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./doc/html/Files.html
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1998-08-07 03:39:22 +08:00
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./doc/html/Filters.html
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1998-07-15 13:42:11 +08:00
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./doc/html/Glossary.html
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1998-07-09 00:48:48 +08:00
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./doc/html/Groups.html
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./doc/html/H5.api_map.html
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./doc/html/H5.format.html
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./doc/html/H5.intro.html
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./doc/html/H5.sample_code.html
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./doc/html/H5.user.html
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1999-07-08 06:39:58 +08:00
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./doc/html/H5.user.PrintGen.html
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./doc/html/H5.user.PrintTpg.html
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1998-10-28 01:29:12 +08:00
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./doc/html/IH_map1.gif
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./doc/html/IH_map2.gif
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./doc/html/IH_map3.gif
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./doc/html/IH_map4.gif
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./doc/html/IH_mapFoot.gif
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./doc/html/IH_mapHead.gif
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1998-07-09 00:48:48 +08:00
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./doc/html/IOPipe.html
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1999-10-16 07:22:10 +08:00
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./doc/html/Lib_Maint.html _DO_NOT_DISTRIBUTE_
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./doc/html/Makefile.in
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1998-09-08 21:38:29 +08:00
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./doc/html/MemoryManagement.html _DO_NOT_DISTRIBUTE_
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2000-12-25 16:21:16 +08:00
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./doc/html/MountingFiles.html
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1999-01-07 05:58:34 +08:00
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./doc/html/NCSAfooterlogo.gif
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1998-09-08 21:38:29 +08:00
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./doc/html/ObjectHeader.txt _DO_NOT_DISTRIBUTE_
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2000-12-25 16:21:16 +08:00
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./doc/html/Performance.html
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2000-12-14 00:26:32 +08:00
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./doc/html/PredefDTypes.html
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1998-07-09 00:48:48 +08:00
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./doc/html/Properties.html
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1998-10-30 09:26:52 +08:00
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./doc/html/References.html
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1998-07-15 13:42:11 +08:00
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./doc/html/RM_H5.html
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./doc/html/RM_H5A.html
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./doc/html/RM_H5D.html
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./doc/html/RM_H5E.html
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./doc/html/RM_H5F.html
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./doc/html/RM_H5Front.html
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./doc/html/RM_H5G.html
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1998-10-30 09:26:52 +08:00
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./doc/html/RM_H5I.html
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1998-07-15 13:42:11 +08:00
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./doc/html/RM_H5P.html
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1998-10-30 09:26:52 +08:00
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./doc/html/RM_H5R.html
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1998-07-15 13:42:11 +08:00
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./doc/html/RM_H5S.html
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./doc/html/RM_H5T.html
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./doc/html/RM_H5Z.html
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2001-02-06 04:23:55 +08:00
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./doc/html/Tools.html
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./doc/html/Version.html
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./doc/html/chunk1.gif
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./doc/html/chunk1.obj _DO_NOT_DISTRIBUTE_
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./doc/html/compat.html
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./doc/html/dataset_p1.gif
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./doc/html/dataset_p1.obj _DO_NOT_DISTRIBUTE_
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./doc/html/extern1.gif
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./doc/html/extern2.obj _DO_NOT_DISTRIBUTE_
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./doc/html/ADGuide.html
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./doc/html/ADGuide/Changes.html
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./doc/html/ADGuide/Dependencies
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./doc/html/ADGuide/H4toH5Mapping.pdf
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./doc/html/ADGuide/H4toH5Mapping.doc _DO_NOT_DISTRIBUTE_
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./doc/html/ADGuide/HISTORY.txt
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./doc/html/ADGuide/ImageSpec.html
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./doc/html/ADGuide/Makefile.in
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./doc/html/ADGuide/RELEASE.txt
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./doc/html/Graphics/C++.gif
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./doc/html/Graphics/Dependencies
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./doc/html/Graphics/Makefile.in
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2001-02-14 03:37:02 +08:00
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./doc/html/Intro/Dependencies
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2001-02-10 04:17:48 +08:00
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./doc/html/Intro/IntroExamples.html
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./doc/html/Intro/Makefile.in
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2001-02-06 04:23:55 +08:00
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./doc/html/PSandPDF/Dependencies
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./doc/html/PSandPDF/Makefile.in
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2000-08-29 00:39:32 +08:00
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./doc/html/TechNotes.html
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2002-11-14 00:29:57 +08:00
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./doc/html/TechNotes/shuffling-algorithm-report.pdf
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2003-09-25 23:07:17 +08:00
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./doc/html/TechNotes/Basic_perform.html
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2000-08-29 00:39:32 +08:00
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./doc/html/TechNotes/BigDataSmMach.html
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./doc/html/TechNotes/ChStudy_p1.gif
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2001-02-07 03:27:31 +08:00
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2000-08-29 00:39:32 +08:00
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./doc/html/TechNotes/ChunkingStudy.html
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./doc/html/TechNotes/CodeReview.html
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2002-10-29 01:56:00 +08:00
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./doc/html/TechNotes/Daily_Test_Explained.htm
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2001-02-06 04:23:55 +08:00
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./doc/html/TechNotes/Dependencies
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2000-08-29 00:39:32 +08:00
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./doc/html/TechNotes/ExternalFiles.html
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./doc/html/TechNotes/FreeLists.html
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./doc/html/TechNotes/H4-H5Compat.html
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./doc/html/TechNotes/HeapMgmt.html
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./doc/html/TechNotes/IOPipe.html
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./doc/html/TechNotes/LibMaint.html
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2001-02-06 04:23:55 +08:00
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./doc/html/TechNotes/Makefile.in
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2000-08-29 00:39:32 +08:00
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./doc/html/TechNotes/MemoryMgmt.html
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|
1998-09-08 21:38:29 +08:00
|
|
|
./doc/html/pipe4.obj _DO_NOT_DISTRIBUTE_
|
1998-07-09 00:48:48 +08:00
|
|
|
./doc/html/pipe5.gif
|
1998-09-08 21:38:29 +08:00
|
|
|
./doc/html/pipe5.obj _DO_NOT_DISTRIBUTE_
|
|
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|
./doc/html/heap.txt _DO_NOT_DISTRIBUTE_
|
1998-07-09 00:48:48 +08:00
|
|
|
./doc/html/index.html
|
1998-09-08 21:38:29 +08:00
|
|
|
./doc/html/move.html _DO_NOT_DISTRIBUTE_
|
|
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|
./doc/html/review1.html _DO_NOT_DISTRIBUTE_
|
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|
./doc/html/review1a.html _DO_NOT_DISTRIBUTE_
|
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|
./doc/html/storage.html _DO_NOT_DISTRIBUTE_
|
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./doc/html/symtab _DO_NOT_DISTRIBUTE_
|
1998-07-09 00:48:48 +08:00
|
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|
./doc/html/version.gif
|
1998-09-08 21:38:29 +08:00
|
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|
./doc/html/version.obj _DO_NOT_DISTRIBUTE_
|
1998-10-30 09:26:52 +08:00
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|
./doc/src/Copyright.html _DO_NOT_DISTRIBUTE_
|
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./doc/src/Glossary.html _DO_NOT_DISTRIBUTE_
|
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./doc/src/H5.intro.doc _DO_NOT_DISTRIBUTE_
|
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./doc/src/RM_H5.html _DO_NOT_DISTRIBUTE_
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./doc/src/RM_H5A.html _DO_NOT_DISTRIBUTE_
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./doc/src/RM_H5D.html _DO_NOT_DISTRIBUTE_
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./doc/src/RM_H5E.html _DO_NOT_DISTRIBUTE_
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./doc/src/RM_H5F.html _DO_NOT_DISTRIBUTE_
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./doc/src/RM_H5Front.html _DO_NOT_DISTRIBUTE_
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./doc/src/RM_H5G.html _DO_NOT_DISTRIBUTE_
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./doc/src/RM_H5P.html _DO_NOT_DISTRIBUTE_
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./doc/src/RM_H5R.html _DO_NOT_DISTRIBUTE_
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./doc/src/RM_H5S.html _DO_NOT_DISTRIBUTE_
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./doc/src/RM_H5T.html _DO_NOT_DISTRIBUTE_
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./doc/src/RM_H5Z.html _DO_NOT_DISTRIBUTE_
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./doc/src/Tools.html _DO_NOT_DISTRIBUTE_
|
1998-09-08 21:38:29 +08:00
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./doc/tgif/APIGrammar.obj _DO_NOT_DISTRIBUTE_
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./doc/tgif/FileGrammar.obj _DO_NOT_DISTRIBUTE_
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./doc/tgif/IOPipe.obj _DO_NOT_DISTRIBUTE_
|
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./doc/tgif/RobbPipe.obj _DO_NOT_DISTRIBUTE_
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./doc/tgif/UserView.obj _DO_NOT_DISTRIBUTE_
|
1998-09-11 23:39:28 +08:00
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|
1998-07-09 02:41:04 +08:00
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./examples/Attributes.txt
|
1999-11-03 22:30:40 +08:00
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./examples/Dependencies
|
1998-07-09 02:41:04 +08:00
|
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|
./examples/Makefile.in
|
|
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|
./examples/h5_chunk_read.c
|
|
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|
./examples/h5_compound.c
|
2001-09-18 13:56:34 +08:00
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./examples/h5_drivers.c
|
1998-07-09 02:41:04 +08:00
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./examples/h5_extend_write.c
|
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./examples/h5_group.c
|
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./examples/h5_read.c
|
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./examples/h5_write.c
|
1998-09-01 21:02:15 +08:00
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./examples/h5_select.c
|
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./examples/h5_attribute.c
|
1999-06-26 02:11:57 +08:00
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./examples/h5_mount.c
|
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./examples/h5_reference.c
|
2001-04-25 05:11:35 +08:00
|
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|
./examples/ph5example.c
|
2001-06-16 03:02:48 +08:00
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|
1998-09-08 21:38:29 +08:00
|
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|
2000-09-20 23:22:46 +08:00
|
|
|
#------------------------------------------------------------------------------
|
|
|
|
#
|
|
|
|
# Begin Fortran interface
|
|
|
|
#
|
|
|
|
#------------------------------------------------------------------------------
|
|
|
|
|
|
|
|
./fortran/Makefile.in
|
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|
./fortran/examples/Dependencies
|
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|
./fortran/examples/Makefile.in
|
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./fortran/examples/attrexample.f90
|
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|
./fortran/examples/compound.f90
|
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./fortran/examples/dsetexample.f90
|
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./fortran/examples/fileexample.f90
|
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./fortran/examples/groupexample.f90
|
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./fortran/examples/grpdsetexample.f90
|
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./fortran/examples/grpit.f90
|
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|
./fortran/examples/grpsexample.f90
|
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./fortran/examples/hyperslab.f90
|
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|
./fortran/examples/mountexample.f90
|
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|
./fortran/examples/refobjexample.f90
|
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./fortran/examples/refregexample.f90
|
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./fortran/examples/rwdsetexample.f90
|
|
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|
./fortran/examples/selectele.f90
|
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|
|
./fortran/src/Dependencies
|
2001-04-29 09:12:16 +08:00
|
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|
./fortran/src/H5_f.c
|
|
|
|
./fortran/src/H5_ff.f90
|
2000-09-20 23:22:46 +08:00
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./fortran/src/H5Af.c
|
|
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|
./fortran/src/H5Aff.f90
|
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|
./fortran/src/H5Df.c
|
|
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|
./fortran/src/H5Dff.f90
|
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|
./fortran/src/H5Ef.c
|
|
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./fortran/src/H5Eff.f90
|
2000-11-01 01:58:37 +08:00
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./fortran/src/H5FDmpiof.c
|
|
|
|
./fortran/src/H5FDmpioff.f90
|
2000-09-20 23:22:46 +08:00
|
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./fortran/src/H5Ff.c
|
|
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|
./fortran/src/H5Fff.f90
|
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|
./fortran/src/H5Gf.c
|
|
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|
./fortran/src/H5Gff.f90
|
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|
./fortran/src/H5If.c
|
|
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|
./fortran/src/H5Iff.f90
|
|
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|
./fortran/src/H5Pf.c
|
|
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|
./fortran/src/H5Pff.f90
|
|
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|
./fortran/src/H5Rf.c
|
|
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|
./fortran/src/H5Rff.f90
|
|
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|
./fortran/src/H5Sf.c
|
|
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|
./fortran/src/H5Sff.f90
|
|
|
|
./fortran/src/H5Tf.c
|
|
|
|
./fortran/src/H5Tff.f90
|
2003-03-20 00:03:40 +08:00
|
|
|
./fortran/src/H5Zf.c
|
|
|
|
./fortran/src/H5Zff.f90
|
2000-09-20 23:22:46 +08:00
|
|
|
./fortran/src/H5f90.h
|
|
|
|
./fortran/src/H5f90global.f90
|
|
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|
./fortran/src/H5f90i.h
|
|
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|
./fortran/src/H5f90kit.c
|
|
|
|
./fortran/src/H5f90proto.h
|
|
|
|
./fortran/src/H5fortran_flags.f90
|
|
|
|
./fortran/src/H5fortran_types.f90.in
|
|
|
|
./fortran/src/HDF5.f90
|
2000-11-01 01:58:37 +08:00
|
|
|
./fortran/src/HDF5mpio.f90
|
2000-09-20 23:22:46 +08:00
|
|
|
./fortran/src/Makefile.in
|
|
|
|
./fortran/src/README
|
2003-04-10 08:48:46 +08:00
|
|
|
./fortran/src/h5fc.in
|
2003-04-16 05:43:26 +08:00
|
|
|
./fortran/src/libhdf5_fortran.settings.in
|
2000-09-20 23:22:46 +08:00
|
|
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|
./fortran/test/Dependencies
|
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|
./fortran/test/Makefile.in
|
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|
./fortran/test/fflush1.f90
|
|
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|
./fortran/test/fflush2.f90
|
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|
./fortran/test/fortranlib_test.f90
|
2002-09-24 06:06:01 +08:00
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|
./fortran/test/t.c
|
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./fortran/test/t.h
|
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./fortran/test/tf.f90
|
2000-10-25 03:01:25 +08:00
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./fortran/test/tH5A.f90
|
2000-09-20 23:22:46 +08:00
|
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|
./fortran/test/tH5D.f90
|
2001-11-27 23:07:15 +08:00
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./fortran/test/tH5E.f90
|
2000-09-20 23:22:46 +08:00
|
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|
./fortran/test/tH5F.f90
|
2000-11-08 23:25:23 +08:00
|
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./fortran/test/tH5G.f90
|
2000-10-25 03:01:25 +08:00
|
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|
./fortran/test/tH5I.f90
|
2000-09-20 23:22:46 +08:00
|
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|
./fortran/test/tH5P.f90
|
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|
./fortran/test/tH5R.f90
|
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|
./fortran/test/tH5S.f90
|
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|
|
./fortran/test/tH5Sselect.f90
|
|
|
|
./fortran/test/tH5T.f90
|
2003-03-06 04:12:10 +08:00
|
|
|
./fortran/test/tH5VL.f90
|
2003-03-20 00:03:40 +08:00
|
|
|
./fortran/test/tH5Z.f90
|
2000-09-20 23:22:46 +08:00
|
|
|
|
2000-11-02 01:41:33 +08:00
|
|
|
./fortran/testpar/Dependencies
|
2000-11-01 04:21:06 +08:00
|
|
|
./fortran/testpar/Makefile.in
|
2000-10-31 22:27:02 +08:00
|
|
|
./fortran/testpar/ptesthdf5_fortran.f90
|
|
|
|
./fortran/testpar/thdf5.f90
|
2000-10-31 23:45:25 +08:00
|
|
|
./fortran/testpar/thyperslab_wr.f90
|
2000-10-31 22:27:02 +08:00
|
|
|
|
2000-09-20 23:22:46 +08:00
|
|
|
#------------------------------------------------------------------------------
|
|
|
|
#
|
|
|
|
# End Fortran interface
|
2000-11-15 07:20:32 +08:00
|
|
|
#
|
|
|
|
#------------------------------------------------------------------------------
|
|
|
|
|
|
|
|
#------------------------------------------------------------------------------
|
|
|
|
#
|
|
|
|
# Begin C++ interface
|
|
|
|
#
|
|
|
|
#------------------------------------------------------------------------------
|
|
|
|
|
|
|
|
./c++/Makefile.in
|
|
|
|
|
2000-11-16 01:45:46 +08:00
|
|
|
./c++/examples/Dependencies
|
2000-11-15 07:20:32 +08:00
|
|
|
./c++/examples/Attributes.h5
|
|
|
|
./c++/examples/Group.h5
|
|
|
|
./c++/examples/SDS.h5
|
|
|
|
./c++/examples/SDScompound.h5
|
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|
./c++/examples/SDSextendible.h5
|
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|
./c++/examples/Select.h5
|
2000-12-08 04:29:18 +08:00
|
|
|
./c++/examples/chunks.cpp
|
|
|
|
./c++/examples/compound.cpp
|
|
|
|
./c++/examples/create.cpp
|
2000-12-09 00:50:22 +08:00
|
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|
./c++/examples/expected.out
|
2000-12-08 04:29:18 +08:00
|
|
|
./c++/examples/extend_ds.cpp
|
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|
|
./c++/examples/h5group.cpp
|
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|
./c++/examples/readdata.cpp
|
2000-12-09 00:50:22 +08:00
|
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|
./c++/examples/testexamples.sh
|
2000-12-08 04:29:18 +08:00
|
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|
./c++/examples/writedata.cpp
|
2000-11-15 07:20:32 +08:00
|
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|
./c++/examples/Makefile.in
|
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|
2000-11-16 01:45:46 +08:00
|
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|
./c++/src/Dependencies
|
2000-12-08 04:29:18 +08:00
|
|
|
./c++/src/H5AbstractDs.cpp
|
2000-11-15 07:20:32 +08:00
|
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|
./c++/src/H5AbstractDs.h
|
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|
./c++/src/H5Alltypes.h
|
2004-05-18 12:41:18 +08:00
|
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|
./c++/src/H5ArrayType.cpp
|
|
|
|
./c++/src/H5ArrayType.h
|
2000-12-08 04:29:18 +08:00
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|
./c++/src/H5AtomType.cpp
|
2000-11-15 07:20:32 +08:00
|
|
|
./c++/src/H5AtomType.h
|
2000-12-08 04:29:18 +08:00
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|
./c++/src/H5Attribute.cpp
|
2000-11-15 07:20:32 +08:00
|
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|
./c++/src/H5Attribute.h
|
|
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|
./c++/src/H5Classes.h
|
2000-12-08 04:29:18 +08:00
|
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|
./c++/src/H5CommonFG.cpp
|
2000-11-15 07:20:32 +08:00
|
|
|
./c++/src/H5CommonFG.h
|
2000-12-08 04:29:18 +08:00
|
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|
./c++/src/H5CompType.cpp
|
2000-11-15 07:20:32 +08:00
|
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|
./c++/src/H5CompType.h
|
|
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|
./c++/src/H5Cpp.h
|
2000-12-08 04:29:18 +08:00
|
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|
./c++/src/H5DataSet.cpp
|
2000-11-15 07:20:32 +08:00
|
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|
./c++/src/H5DataSet.h
|
2000-12-08 04:29:18 +08:00
|
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|
./c++/src/H5DataSpace.cpp
|
2000-11-15 07:20:32 +08:00
|
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|
./c++/src/H5DataSpace.h
|
2000-12-08 04:29:18 +08:00
|
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|
./c++/src/H5DataType.cpp
|
2000-11-15 07:20:32 +08:00
|
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|
./c++/src/H5DataType.h
|
2000-12-08 04:29:18 +08:00
|
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|
./c++/src/H5DcreatProp.cpp
|
2000-11-15 07:20:32 +08:00
|
|
|
./c++/src/H5DcreatProp.h
|
2000-12-08 04:29:18 +08:00
|
|
|
./c++/src/H5DxferProp.cpp
|
2000-11-15 07:20:32 +08:00
|
|
|
./c++/src/H5DxferProp.h
|
2000-12-08 04:29:18 +08:00
|
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|
./c++/src/H5EnumType.cpp
|
2000-11-15 07:20:32 +08:00
|
|
|
./c++/src/H5EnumType.h
|
2000-12-08 04:29:18 +08:00
|
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|
./c++/src/H5Exception.cpp
|
2000-11-15 07:20:32 +08:00
|
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|
./c++/src/H5Exception.h
|
2000-12-08 04:29:18 +08:00
|
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|
./c++/src/H5FaccProp.cpp
|
2000-11-15 07:20:32 +08:00
|
|
|
./c++/src/H5FaccProp.h
|
2000-12-08 04:29:18 +08:00
|
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|
./c++/src/H5FcreatProp.cpp
|
2000-11-15 07:20:32 +08:00
|
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|
./c++/src/H5FcreatProp.h
|
2000-12-08 04:29:18 +08:00
|
|
|
./c++/src/H5File.cpp
|
2000-11-15 07:20:32 +08:00
|
|
|
./c++/src/H5File.h
|
2000-12-08 04:29:18 +08:00
|
|
|
./c++/src/H5FloatType.cpp
|
2000-11-15 07:20:32 +08:00
|
|
|
./c++/src/H5FloatType.h
|
2000-12-08 04:29:18 +08:00
|
|
|
./c++/src/H5Group.cpp
|
2000-11-15 07:20:32 +08:00
|
|
|
./c++/src/H5Group.h
|
2000-12-08 04:29:18 +08:00
|
|
|
./c++/src/H5IdComponent.cpp
|
2000-11-15 07:20:32 +08:00
|
|
|
./c++/src/H5IdComponent.h
|
|
|
|
./c++/src/H5Include.h
|
2000-12-08 04:29:18 +08:00
|
|
|
./c++/src/H5IntType.cpp
|
2000-11-15 07:20:32 +08:00
|
|
|
./c++/src/H5IntType.h
|
2000-12-08 04:29:18 +08:00
|
|
|
./c++/src/H5Library.cpp
|
2000-11-15 07:20:32 +08:00
|
|
|
./c++/src/H5Library.h
|
2000-12-08 04:29:18 +08:00
|
|
|
./c++/src/H5Object.cpp
|
2000-11-15 07:20:32 +08:00
|
|
|
./c++/src/H5Object.h
|
2000-12-08 04:29:18 +08:00
|
|
|
./c++/src/H5PredType.cpp
|
2000-11-15 07:20:32 +08:00
|
|
|
./c++/src/H5PredType.h
|
2000-12-08 04:29:18 +08:00
|
|
|
./c++/src/H5PropList.cpp
|
2000-11-15 07:20:32 +08:00
|
|
|
./c++/src/H5PropList.h
|
2000-12-08 04:29:18 +08:00
|
|
|
./c++/src/H5StrType.cpp
|
2000-11-15 07:20:32 +08:00
|
|
|
./c++/src/H5StrType.h
|
2004-05-18 12:41:18 +08:00
|
|
|
./c++/src/H5VarLenType.cpp
|
|
|
|
./c++/src/H5VarLenType.h
|
2000-11-15 07:20:32 +08:00
|
|
|
./c++/src/Makefile.in
|
2003-06-06 06:17:03 +08:00
|
|
|
./c++/src/h5c++.in
|
2000-11-15 07:20:32 +08:00
|
|
|
|
2000-11-16 01:45:46 +08:00
|
|
|
./c++/test/Dependencies
|
2000-11-15 07:20:32 +08:00
|
|
|
./c++/test/Makefile.in
|
2001-03-06 00:25:56 +08:00
|
|
|
./c++/test/dsets.cpp
|
2003-06-10 11:34:43 +08:00
|
|
|
./c++/test/h5cpputil.cpp
|
|
|
|
./c++/test/h5cpputil.h
|
2001-03-06 00:25:56 +08:00
|
|
|
./c++/test/testhdf5.cpp
|
|
|
|
./c++/test/tfile.cpp
|
2001-03-15 02:30:42 +08:00
|
|
|
./c++/test/th5s.cpp
|
2001-03-16 03:20:25 +08:00
|
|
|
./c++/test/th5s.h5
|
2000-11-15 07:20:32 +08:00
|
|
|
|
|
|
|
#------------------------------------------------------------------------------
|
|
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|
#
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|
# End C++ interface
|
2000-09-20 23:22:46 +08:00
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|
#
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|
|
#------------------------------------------------------------------------------
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|
1999-04-23 20:31:21 +08:00
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./pablo/HDFIOTrace.h
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./pablo/HDFTrace.h
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|
|
|
./pablo/HDFmpioProtos.h
|
|
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|
./pablo/HDFrecord_RT.h
|
1998-10-28 01:29:12 +08:00
|
|
|
./pablo/Makefile.in
|
1999-04-28 23:53:42 +08:00
|
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./pablo/PabloHDF.c
|
2001-07-05 23:14:24 +08:00
|
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./pablo/PabloHDF_MPIO.c
|
1998-10-28 01:29:12 +08:00
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./pablo/PabloHDF_RT.c
|
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./pablo/PabloHDF_SDDF.c
|
2000-08-31 03:36:20 +08:00
|
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|
./pablo/PabloHDFff.f
|
1999-04-23 20:31:21 +08:00
|
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|
./pablo/PabloSedscr
|
2003-08-13 22:18:13 +08:00
|
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|
./pablo/ProcIDs.h
|
1999-03-13 02:35:04 +08:00
|
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|
./pablo/ProcTrace.h
|
1999-04-29 01:15:26 +08:00
|
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./pablo/READ_ME
|
1998-10-28 01:29:12 +08:00
|
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|
2001-08-15 04:05:03 +08:00
|
|
|
./perform/Dependencies
|
2001-08-15 02:54:46 +08:00
|
|
|
./perform/Makefile.in
|
2002-11-05 19:04:53 +08:00
|
|
|
./perform/benchpar.c
|
2001-08-15 02:54:46 +08:00
|
|
|
./perform/chunk.c
|
2002-06-04 03:57:43 +08:00
|
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./perform/gen_report.pl
|
2001-08-15 02:54:46 +08:00
|
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./perform/iopipe.c
|
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|
./perform/mpi-perf.c
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./perform/overhead.c
|
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./perform/perf.c
|
2003-10-15 06:05:03 +08:00
|
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|
./perform/perf_meta.c
|
2001-11-07 23:32:21 +08:00
|
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./perform/pio_engine.c
|
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./perform/pio_perf.c
|
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|
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./perform/pio_perf.h
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./perform/pio_timer.c
|
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./perform/pio_timer.h
|
2002-06-08 05:06:10 +08:00
|
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|
./perform/zip_perf.c
|
2001-08-15 02:54:46 +08:00
|
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|
2001-07-06 00:36:40 +08:00
|
|
|
./release_docs/INSTALL
|
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|
|
./release_docs/INSTALL_TFLOPS
|
|
|
|
./release_docs/INSTALL_VFL
|
|
|
|
./release_docs/INSTALL_parallel
|
|
|
|
./release_docs/INSTALL_Windows.txt
|
2003-06-03 04:29:13 +08:00
|
|
|
./release_docs/INSTALL_Windows_withF90.txt
|
2002-02-26 23:10:04 +08:00
|
|
|
./release_docs/INSTALL_Windows_withcpp.txt
|
2001-07-10 02:35:23 +08:00
|
|
|
./release_docs/INSTALL_codewarrior.txt
|
2001-07-06 00:36:40 +08:00
|
|
|
./release_docs/HISTORY.txt
|
|
|
|
./release_docs/RELEASE.txt
|
|
|
|
|
1998-09-08 21:38:29 +08:00
|
|
|
./src/.indent.pro _DO_NOT_DISTRIBUTE_
|
2003-07-09 05:03:44 +08:00
|
|
|
./src/hdf5.lnt _DO_NOT_DISTRIBUTE_
|
1999-11-03 22:30:40 +08:00
|
|
|
./src/Dependencies
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5.c
|
1999-02-03 03:37:20 +08:00
|
|
|
./src/H5api_adpt.h
|
2003-08-13 09:51:16 +08:00
|
|
|
./src/H5err.txt
|
1998-04-24 06:23:43 +08:00
|
|
|
./src/H5A.c
|
|
|
|
./src/H5Aprivate.h
|
|
|
|
./src/H5Apublic.h
|
|
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|
./src/H5Apkg.h
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5AC.c
|
|
|
|
./src/H5ACprivate.h
|
|
|
|
./src/H5ACpublic.h
|
|
|
|
./src/H5B.c
|
2003-05-16 03:22:33 +08:00
|
|
|
./src/H5Bpkg.h
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5Bprivate.h
|
|
|
|
./src/H5Bpublic.h
|
|
|
|
./src/H5D.c
|
2004-06-06 03:32:31 +08:00
|
|
|
./src/H5Dcontig.c
|
|
|
|
./src/H5Dcompact.c
|
2003-05-08 05:52:24 +08:00
|
|
|
./src/H5Dio.c
|
2004-06-06 03:32:31 +08:00
|
|
|
./src/H5Distore.c
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5Dprivate.h
|
|
|
|
./src/H5Dpublic.h
|
2003-05-08 05:52:24 +08:00
|
|
|
./src/H5Dpkg.h
|
2004-06-06 03:32:31 +08:00
|
|
|
./src/H5Dseq.c
|
2004-05-28 04:24:08 +08:00
|
|
|
./src/H5Dtest.c
|
2004-05-04 07:34:42 +08:00
|
|
|
./src/H5Ztrans.c
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5E.c
|
2003-08-13 09:51:16 +08:00
|
|
|
./src/H5Edefin.h
|
|
|
|
./src/H5Einit.h
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5Eprivate.h
|
2003-08-13 09:51:16 +08:00
|
|
|
./src/H5Epubgen.h
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5Epublic.h
|
2003-08-13 09:51:16 +08:00
|
|
|
./src/H5Eterm.h
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5F.c
|
2003-07-10 02:14:29 +08:00
|
|
|
./src/H5Fdbg.c
|
2000-10-10 15:40:07 +08:00
|
|
|
./src/H5Fpkg.h
|
1998-02-17 05:26:59 +08:00
|
|
|
./src/H5Fprivate.h
|
|
|
|
./src/H5Fpublic.h
|
1999-08-11 04:21:32 +08:00
|
|
|
./src/H5FD.c
|
1999-08-18 03:12:59 +08:00
|
|
|
./src/H5FDcore.c
|
|
|
|
./src/H5FDcore.h
|
1999-08-11 04:21:32 +08:00
|
|
|
./src/H5FDfamily.c
|
|
|
|
./src/H5FDfamily.h
|
2003-02-07 06:06:35 +08:00
|
|
|
./src/H5FDfphdf5.c
|
|
|
|
./src/H5FDfphdf5.h
|
1999-08-31 13:06:01 +08:00
|
|
|
./src/H5FDgass.c
|
|
|
|
./src/H5FDgass.h
|
2000-05-12 22:59:07 +08:00
|
|
|
./src/H5FDlog.c
|
|
|
|
./src/H5FDlog.h
|
2004-01-31 09:38:44 +08:00
|
|
|
./src/H5FDmpi.c
|
|
|
|
./src/H5FDmpi.h
|
1999-08-11 04:21:32 +08:00
|
|
|
./src/H5FDmpio.c
|
|
|
|
./src/H5FDmpio.h
|
2002-07-15 23:30:03 +08:00
|
|
|
./src/H5FDmpiposix.c
|
|
|
|
./src/H5FDmpiposix.h
|
1999-08-18 03:12:59 +08:00
|
|
|
./src/H5FDmulti.c
|
|
|
|
./src/H5FDmulti.h
|
|
|
|
./src/H5FDprivate.h
|
|
|
|
./src/H5FDpublic.h
|
|
|
|
./src/H5FDsec2.c
|
|
|
|
./src/H5FDsec2.h
|
2000-04-14 00:13:30 +08:00
|
|
|
./src/H5FDsrb.c
|
|
|
|
./src/H5FDsrb.h
|
1999-10-27 03:34:29 +08:00
|
|
|
./src/H5FDstdio.c
|
|
|
|
./src/H5FDstdio.h
|
2000-09-17 00:55:24 +08:00
|
|
|
./src/H5FDstream.c
|
|
|
|
./src/H5FDstream.h
|
2000-04-05 05:00:31 +08:00
|
|
|
./src/H5FL.c
|
|
|
|
./src/H5FLprivate.h
|
[svn-r6252] Purpose:
Lots of performance improvements & a couple new internal API interfaces.
Description:
Performance Improvements:
- Cached file offset & length sizes in shared file struct, to avoid
constantly looking them up in the FCPL.
- Generic property improvements:
- Added "revision" number to generic property classes to speed
up comparisons.
- Changed method of storing properties from using a hash-table
to the TBBT routines in the library.
- Share the propery names between classes and the lists derived
from them.
- Removed redundant 'def_value' buffer from each property.
- Switching code to use a "copy on write" strategy for
properties in each list, where the properties in each list
are shared with the properties in the class, until a
property's value is changed in a list.
- Fixed error in layout code which was allocating too many buffers.
- Redefined public macros of the form (H5open()/H5check, <variable>)
internally to only be (<variable>), avoiding innumerable useless
calls to H5open() and H5check_version().
- Reuse already zeroed buffers in H5F_contig_fill instead of
constantly re-zeroing them.
- Don't write fill values if writing entire dataset.
- Use gettimeofday() system call instead of time() system when
checking the modification time of a dataset.
- Added reference counted string API and use it for tracking the
names of objects opening in a file (for the ID->name code).
- Removed redundant H5P_get() calls in B-tree routines.
- Redefine H5T datatype macros internally to the library, to avoid
calling H5check redundantly.
- Keep dataspace information for dataset locally instead of reading
from disk each time. Added new module to track open objects
in a file, to allow this (which will be useful eventually for
some FPH5 metadata caching issues).
- Remove H5AC_find macro which was inlining metadata cache lookups,
and call function instead.
- Remove redundant memset() calls from H5G_namei() routine.
- Remove redundant checking of object type when locating objects
in metadata cache and rely on the address only.
- Create default dataset object to use when default dataset creation
property list is used to create datasets, bypassing querying
for all the property list values.
- Use default I/O vector size when performing raw data with the
default dataset transfer property list, instead of querying for
I/O vector size.
- Remove H5P_DEFAULT internally to the library, replacing it with
more specific default property list based on the type of
property list needed.
- Remove redundant memset() calls in object header message (H5O*)
routines.
- Remove redunant memset() calls in data I/O routines.
- Split free-list allocation routines into malloc() and calloc()-
like routines, instead of one combined routine.
- Remove lots of indirection in H5O*() routines.
- Simplify metadata cache entry comparison routine (used when
flushing entire cache out).
- Only enable metadata cache statistics when H5AC_DEBUG is turned
on, instead of always tracking them.
- Simplify address comparison macro (H5F_addr_eq).
- Remove redundant metadata cache entry protections during dataset
creation by protecting the object header once and making all
the modifications necessary for the dataset creation before
unprotecting it.
- Reduce # of "number of element in extent" computations performed
by computing and storing the value during dataspace creation.
- Simplify checking for group location's file information, when file
has not been involving in file-mounting operations.
- Use binary encoding for modification time, instead of ASCII.
- Hoist H5HL_peek calls (to get information in a local heap)
out of loops in many group routine.
- Use static variable for iterators of selections, instead of
dynamically allocation them each time.
- Lookup & insert new entries in one step, avoiding traversing
group's B-tree twice.
- Fixed memory leak in H5Gget_objname_idx() routine (tangential to
performance improvements, but fixed along the way).
- Use free-list for reference counted strings.
- Don't bother copying object names into cached group entries,
since they are re-created when an object is opened.
The benchmark I used to measure these results created several thousand
small (2K) datasets in a file and wrote out the data for them. This is
Elena's "regular.c" benchmark.
These changes resulted in approximately ~4.3x speedup of the
development branch when compared to the previous code in the
development branch and ~1.4x speedup compared to the release
branch.
Additionally, these changes reduce the total memory used (code and
data) by the development branch by ~800KB, bringing the development
branch back into the same ballpark as the release branch.
I'll send out a more detailed description of the benchmark results
as a followup note.
New internal API routines:
Added "reference counted strings" API for tracking strings that get
used by multiple owners without duplicating the strings.
Added "ternary search tree" API for text->object mappings.
Platforms tested:
Tested h5committest {arabica (fortran), eirene (fortran, C++)
modi4 (parallel, fortran)}
Other platforms/configurations tested?
FreeBSD 4.7 (sleipnir) serial & parallel
Solaris 2.6 (baldric) serial
2003-01-10 01:20:03 +08:00
|
|
|
./src/H5FO.c
|
|
|
|
./src/H5FOprivate.h
|
2002-10-24 03:33:35 +08:00
|
|
|
./src/H5FP.c
|
|
|
|
./src/H5FPclient.c
|
|
|
|
./src/H5FPprivate.h
|
|
|
|
./src/H5FPpublic.h
|
|
|
|
./src/H5FPserver.c
|
2003-02-08 05:14:19 +08:00
|
|
|
./src/H5FS.c
|
|
|
|
./src/H5FSprivate.h
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5G.c
|
1997-09-22 10:08:01 +08:00
|
|
|
./src/H5Gent.c
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5Gnode.c
|
1997-09-20 00:33:13 +08:00
|
|
|
./src/H5Gpkg.h
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5Gprivate.h
|
|
|
|
./src/H5Gpublic.h
|
1997-09-22 10:08:01 +08:00
|
|
|
./src/H5Gstab.c
|
1998-03-31 03:24:08 +08:00
|
|
|
./src/H5HG.c
|
2003-07-10 02:14:29 +08:00
|
|
|
./src/H5HGdbg.c
|
|
|
|
./src/H5HGpkg.h
|
1998-03-31 03:24:08 +08:00
|
|
|
./src/H5HGprivate.h
|
|
|
|
./src/H5HGpublic.h
|
|
|
|
./src/H5HL.c
|
2003-07-10 02:14:29 +08:00
|
|
|
./src/H5HLdbg.c
|
|
|
|
./src/H5HLpkg.h
|
1998-03-31 03:24:08 +08:00
|
|
|
./src/H5HLprivate.h
|
|
|
|
./src/H5HLpublic.h
|
2003-02-25 04:25:13 +08:00
|
|
|
./src/H5HP.c
|
|
|
|
./src/H5HPprivate.h
|
1998-03-18 06:46:27 +08:00
|
|
|
./src/H5I.c
|
2003-05-16 03:22:33 +08:00
|
|
|
./src/H5Ipkg.h
|
1998-03-18 06:46:27 +08:00
|
|
|
./src/H5Iprivate.h
|
|
|
|
./src/H5Ipublic.h
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5MF.c
|
|
|
|
./src/H5MFprivate.h
|
|
|
|
./src/H5MM.c
|
|
|
|
./src/H5MMprivate.h
|
|
|
|
./src/H5MMpublic.h
|
2003-01-04 03:38:29 +08:00
|
|
|
./src/H5MPprivate.h
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5O.c
|
1998-04-24 06:23:43 +08:00
|
|
|
./src/H5Oattr.c
|
2003-01-22 04:19:48 +08:00
|
|
|
./src/H5Obogus.c
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5Ocont.c
|
1997-12-12 05:34:05 +08:00
|
|
|
./src/H5Odtype.c
|
1997-12-11 06:38:07 +08:00
|
|
|
./src/H5Oefl.c
|
1998-10-02 02:56:51 +08:00
|
|
|
./src/H5Ofill.c
|
1998-01-17 03:52:04 +08:00
|
|
|
./src/H5Olayout.c
|
1998-07-30 00:43:59 +08:00
|
|
|
./src/H5Omtime.c
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5Oname.c
|
|
|
|
./src/H5Onull.c
|
2003-02-17 23:54:15 +08:00
|
|
|
./src/H5Opkg.h
|
[svn-r6252] Purpose:
Lots of performance improvements & a couple new internal API interfaces.
Description:
Performance Improvements:
- Cached file offset & length sizes in shared file struct, to avoid
constantly looking them up in the FCPL.
- Generic property improvements:
- Added "revision" number to generic property classes to speed
up comparisons.
- Changed method of storing properties from using a hash-table
to the TBBT routines in the library.
- Share the propery names between classes and the lists derived
from them.
- Removed redundant 'def_value' buffer from each property.
- Switching code to use a "copy on write" strategy for
properties in each list, where the properties in each list
are shared with the properties in the class, until a
property's value is changed in a list.
- Fixed error in layout code which was allocating too many buffers.
- Redefined public macros of the form (H5open()/H5check, <variable>)
internally to only be (<variable>), avoiding innumerable useless
calls to H5open() and H5check_version().
- Reuse already zeroed buffers in H5F_contig_fill instead of
constantly re-zeroing them.
- Don't write fill values if writing entire dataset.
- Use gettimeofday() system call instead of time() system when
checking the modification time of a dataset.
- Added reference counted string API and use it for tracking the
names of objects opening in a file (for the ID->name code).
- Removed redundant H5P_get() calls in B-tree routines.
- Redefine H5T datatype macros internally to the library, to avoid
calling H5check redundantly.
- Keep dataspace information for dataset locally instead of reading
from disk each time. Added new module to track open objects
in a file, to allow this (which will be useful eventually for
some FPH5 metadata caching issues).
- Remove H5AC_find macro which was inlining metadata cache lookups,
and call function instead.
- Remove redundant memset() calls from H5G_namei() routine.
- Remove redundant checking of object type when locating objects
in metadata cache and rely on the address only.
- Create default dataset object to use when default dataset creation
property list is used to create datasets, bypassing querying
for all the property list values.
- Use default I/O vector size when performing raw data with the
default dataset transfer property list, instead of querying for
I/O vector size.
- Remove H5P_DEFAULT internally to the library, replacing it with
more specific default property list based on the type of
property list needed.
- Remove redundant memset() calls in object header message (H5O*)
routines.
- Remove redunant memset() calls in data I/O routines.
- Split free-list allocation routines into malloc() and calloc()-
like routines, instead of one combined routine.
- Remove lots of indirection in H5O*() routines.
- Simplify metadata cache entry comparison routine (used when
flushing entire cache out).
- Only enable metadata cache statistics when H5AC_DEBUG is turned
on, instead of always tracking them.
- Simplify address comparison macro (H5F_addr_eq).
- Remove redundant metadata cache entry protections during dataset
creation by protecting the object header once and making all
the modifications necessary for the dataset creation before
unprotecting it.
- Reduce # of "number of element in extent" computations performed
by computing and storing the value during dataspace creation.
- Simplify checking for group location's file information, when file
has not been involving in file-mounting operations.
- Use binary encoding for modification time, instead of ASCII.
- Hoist H5HL_peek calls (to get information in a local heap)
out of loops in many group routine.
- Use static variable for iterators of selections, instead of
dynamically allocation them each time.
- Lookup & insert new entries in one step, avoiding traversing
group's B-tree twice.
- Fixed memory leak in H5Gget_objname_idx() routine (tangential to
performance improvements, but fixed along the way).
- Use free-list for reference counted strings.
- Don't bother copying object names into cached group entries,
since they are re-created when an object is opened.
The benchmark I used to measure these results created several thousand
small (2K) datasets in a file and wrote out the data for them. This is
Elena's "regular.c" benchmark.
These changes resulted in approximately ~4.3x speedup of the
development branch when compared to the previous code in the
development branch and ~1.4x speedup compared to the release
branch.
Additionally, these changes reduce the total memory used (code and
data) by the development branch by ~800KB, bringing the development
branch back into the same ballpark as the release branch.
I'll send out a more detailed description of the benchmark results
as a followup note.
New internal API routines:
Added "reference counted strings" API for tracking strings that get
used by multiple owners without duplicating the strings.
Added "ternary search tree" API for text->object mappings.
Platforms tested:
Tested h5committest {arabica (fortran), eirene (fortran, C++)
modi4 (parallel, fortran)}
Other platforms/configurations tested?
FreeBSD 4.7 (sleipnir) serial & parallel
Solaris 2.6 (baldric) serial
2003-01-10 01:20:03 +08:00
|
|
|
./src/H5Opline.c
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5Oprivate.h
|
|
|
|
./src/H5Opublic.h
|
1997-12-12 05:34:05 +08:00
|
|
|
./src/H5Osdspace.c
|
1998-04-03 11:29:38 +08:00
|
|
|
./src/H5Oshared.c
|
1997-09-11 03:58:12 +08:00
|
|
|
./src/H5Ostab.c
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5P.c
|
2002-08-13 02:13:27 +08:00
|
|
|
./src/H5Pdcpl.c
|
|
|
|
./src/H5Pdxpl.c
|
|
|
|
./src/H5Pfapl.c
|
|
|
|
./src/H5Pfcpl.c
|
2001-11-21 02:47:42 +08:00
|
|
|
./src/H5Ppkg.h
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5Pprivate.h
|
|
|
|
./src/H5Ppublic.h
|
2003-06-04 23:47:17 +08:00
|
|
|
./src/H5Ptest.c
|
1998-10-08 05:03:47 +08:00
|
|
|
./src/H5R.c
|
|
|
|
./src/H5Rprivate.h
|
|
|
|
./src/H5Rpublic.h
|
[svn-r6252] Purpose:
Lots of performance improvements & a couple new internal API interfaces.
Description:
Performance Improvements:
- Cached file offset & length sizes in shared file struct, to avoid
constantly looking them up in the FCPL.
- Generic property improvements:
- Added "revision" number to generic property classes to speed
up comparisons.
- Changed method of storing properties from using a hash-table
to the TBBT routines in the library.
- Share the propery names between classes and the lists derived
from them.
- Removed redundant 'def_value' buffer from each property.
- Switching code to use a "copy on write" strategy for
properties in each list, where the properties in each list
are shared with the properties in the class, until a
property's value is changed in a list.
- Fixed error in layout code which was allocating too many buffers.
- Redefined public macros of the form (H5open()/H5check, <variable>)
internally to only be (<variable>), avoiding innumerable useless
calls to H5open() and H5check_version().
- Reuse already zeroed buffers in H5F_contig_fill instead of
constantly re-zeroing them.
- Don't write fill values if writing entire dataset.
- Use gettimeofday() system call instead of time() system when
checking the modification time of a dataset.
- Added reference counted string API and use it for tracking the
names of objects opening in a file (for the ID->name code).
- Removed redundant H5P_get() calls in B-tree routines.
- Redefine H5T datatype macros internally to the library, to avoid
calling H5check redundantly.
- Keep dataspace information for dataset locally instead of reading
from disk each time. Added new module to track open objects
in a file, to allow this (which will be useful eventually for
some FPH5 metadata caching issues).
- Remove H5AC_find macro which was inlining metadata cache lookups,
and call function instead.
- Remove redundant memset() calls from H5G_namei() routine.
- Remove redundant checking of object type when locating objects
in metadata cache and rely on the address only.
- Create default dataset object to use when default dataset creation
property list is used to create datasets, bypassing querying
for all the property list values.
- Use default I/O vector size when performing raw data with the
default dataset transfer property list, instead of querying for
I/O vector size.
- Remove H5P_DEFAULT internally to the library, replacing it with
more specific default property list based on the type of
property list needed.
- Remove redundant memset() calls in object header message (H5O*)
routines.
- Remove redunant memset() calls in data I/O routines.
- Split free-list allocation routines into malloc() and calloc()-
like routines, instead of one combined routine.
- Remove lots of indirection in H5O*() routines.
- Simplify metadata cache entry comparison routine (used when
flushing entire cache out).
- Only enable metadata cache statistics when H5AC_DEBUG is turned
on, instead of always tracking them.
- Simplify address comparison macro (H5F_addr_eq).
- Remove redundant metadata cache entry protections during dataset
creation by protecting the object header once and making all
the modifications necessary for the dataset creation before
unprotecting it.
- Reduce # of "number of element in extent" computations performed
by computing and storing the value during dataspace creation.
- Simplify checking for group location's file information, when file
has not been involving in file-mounting operations.
- Use binary encoding for modification time, instead of ASCII.
- Hoist H5HL_peek calls (to get information in a local heap)
out of loops in many group routine.
- Use static variable for iterators of selections, instead of
dynamically allocation them each time.
- Lookup & insert new entries in one step, avoiding traversing
group's B-tree twice.
- Fixed memory leak in H5Gget_objname_idx() routine (tangential to
performance improvements, but fixed along the way).
- Use free-list for reference counted strings.
- Don't bother copying object names into cached group entries,
since they are re-created when an object is opened.
The benchmark I used to measure these results created several thousand
small (2K) datasets in a file and wrote out the data for them. This is
Elena's "regular.c" benchmark.
These changes resulted in approximately ~4.3x speedup of the
development branch when compared to the previous code in the
development branch and ~1.4x speedup compared to the release
branch.
Additionally, these changes reduce the total memory used (code and
data) by the development branch by ~800KB, bringing the development
branch back into the same ballpark as the release branch.
I'll send out a more detailed description of the benchmark results
as a followup note.
New internal API routines:
Added "reference counted strings" API for tracking strings that get
used by multiple owners without duplicating the strings.
Added "ternary search tree" API for text->object mappings.
Platforms tested:
Tested h5committest {arabica (fortran), eirene (fortran, C++)
modi4 (parallel, fortran)}
Other platforms/configurations tested?
FreeBSD 4.7 (sleipnir) serial & parallel
Solaris 2.6 (baldric) serial
2003-01-10 01:20:03 +08:00
|
|
|
./src/H5RS.c
|
|
|
|
./src/H5RSprivate.h
|
1998-02-27 02:10:51 +08:00
|
|
|
./src/H5S.c
|
1998-07-07 04:58:42 +08:00
|
|
|
./src/H5Sall.c
|
|
|
|
./src/H5Shyper.c
|
1998-08-19 02:26:32 +08:00
|
|
|
./src/H5Smpio.c
|
1998-11-13 08:26:28 +08:00
|
|
|
./src/H5Snone.c
|
2000-10-10 15:40:07 +08:00
|
|
|
./src/H5Spkg.h
|
2003-04-09 10:38:07 +08:00
|
|
|
./src/H5Spoint.c
|
1998-02-27 02:10:51 +08:00
|
|
|
./src/H5Sprivate.h
|
|
|
|
./src/H5Spublic.h
|
1998-07-07 04:58:42 +08:00
|
|
|
./src/H5Sselect.c
|
2003-06-04 23:47:17 +08:00
|
|
|
./src/H5Stest.c
|
[svn-r6252] Purpose:
Lots of performance improvements & a couple new internal API interfaces.
Description:
Performance Improvements:
- Cached file offset & length sizes in shared file struct, to avoid
constantly looking them up in the FCPL.
- Generic property improvements:
- Added "revision" number to generic property classes to speed
up comparisons.
- Changed method of storing properties from using a hash-table
to the TBBT routines in the library.
- Share the propery names between classes and the lists derived
from them.
- Removed redundant 'def_value' buffer from each property.
- Switching code to use a "copy on write" strategy for
properties in each list, where the properties in each list
are shared with the properties in the class, until a
property's value is changed in a list.
- Fixed error in layout code which was allocating too many buffers.
- Redefined public macros of the form (H5open()/H5check, <variable>)
internally to only be (<variable>), avoiding innumerable useless
calls to H5open() and H5check_version().
- Reuse already zeroed buffers in H5F_contig_fill instead of
constantly re-zeroing them.
- Don't write fill values if writing entire dataset.
- Use gettimeofday() system call instead of time() system when
checking the modification time of a dataset.
- Added reference counted string API and use it for tracking the
names of objects opening in a file (for the ID->name code).
- Removed redundant H5P_get() calls in B-tree routines.
- Redefine H5T datatype macros internally to the library, to avoid
calling H5check redundantly.
- Keep dataspace information for dataset locally instead of reading
from disk each time. Added new module to track open objects
in a file, to allow this (which will be useful eventually for
some FPH5 metadata caching issues).
- Remove H5AC_find macro which was inlining metadata cache lookups,
and call function instead.
- Remove redundant memset() calls from H5G_namei() routine.
- Remove redundant checking of object type when locating objects
in metadata cache and rely on the address only.
- Create default dataset object to use when default dataset creation
property list is used to create datasets, bypassing querying
for all the property list values.
- Use default I/O vector size when performing raw data with the
default dataset transfer property list, instead of querying for
I/O vector size.
- Remove H5P_DEFAULT internally to the library, replacing it with
more specific default property list based on the type of
property list needed.
- Remove redundant memset() calls in object header message (H5O*)
routines.
- Remove redunant memset() calls in data I/O routines.
- Split free-list allocation routines into malloc() and calloc()-
like routines, instead of one combined routine.
- Remove lots of indirection in H5O*() routines.
- Simplify metadata cache entry comparison routine (used when
flushing entire cache out).
- Only enable metadata cache statistics when H5AC_DEBUG is turned
on, instead of always tracking them.
- Simplify address comparison macro (H5F_addr_eq).
- Remove redundant metadata cache entry protections during dataset
creation by protecting the object header once and making all
the modifications necessary for the dataset creation before
unprotecting it.
- Reduce # of "number of element in extent" computations performed
by computing and storing the value during dataspace creation.
- Simplify checking for group location's file information, when file
has not been involving in file-mounting operations.
- Use binary encoding for modification time, instead of ASCII.
- Hoist H5HL_peek calls (to get information in a local heap)
out of loops in many group routine.
- Use static variable for iterators of selections, instead of
dynamically allocation them each time.
- Lookup & insert new entries in one step, avoiding traversing
group's B-tree twice.
- Fixed memory leak in H5Gget_objname_idx() routine (tangential to
performance improvements, but fixed along the way).
- Use free-list for reference counted strings.
- Don't bother copying object names into cached group entries,
since they are re-created when an object is opened.
The benchmark I used to measure these results created several thousand
small (2K) datasets in a file and wrote out the data for them. This is
Elena's "regular.c" benchmark.
These changes resulted in approximately ~4.3x speedup of the
development branch when compared to the previous code in the
development branch and ~1.4x speedup compared to the release
branch.
Additionally, these changes reduce the total memory used (code and
data) by the development branch by ~800KB, bringing the development
branch back into the same ballpark as the release branch.
I'll send out a more detailed description of the benchmark results
as a followup note.
New internal API routines:
Added "reference counted strings" API for tracking strings that get
used by multiple owners without duplicating the strings.
Added "ternary search tree" API for text->object mappings.
Platforms tested:
Tested h5committest {arabica (fortran), eirene (fortran, C++)
modi4 (parallel, fortran)}
Other platforms/configurations tested?
FreeBSD 4.7 (sleipnir) serial & parallel
Solaris 2.6 (baldric) serial
2003-01-10 01:20:03 +08:00
|
|
|
./src/H5ST.c
|
|
|
|
./src/H5STprivate.h
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5T.c
|
2003-02-12 21:44:31 +08:00
|
|
|
./src/H5Tarray.c
|
1998-06-13 01:31:06 +08:00
|
|
|
./src/H5Tbit.c
|
2003-02-12 21:44:31 +08:00
|
|
|
./src/H5Tcommit.c
|
|
|
|
./src/H5Tcompound.c
|
1998-01-15 03:42:59 +08:00
|
|
|
./src/H5Tconv.c
|
2003-02-12 21:44:31 +08:00
|
|
|
./src/H5Tcset.c
|
|
|
|
./src/H5Tenum.c
|
|
|
|
./src/H5Tfields.c
|
|
|
|
./src/H5Tfixed.c
|
|
|
|
./src/H5Tfloat.c
|
|
|
|
./src/H5Tnative.c
|
|
|
|
./src/H5Toffset.c
|
|
|
|
./src/H5Topaque.c
|
|
|
|
./src/H5Torder.c
|
|
|
|
./src/H5Tpad.c
|
1997-12-11 06:38:07 +08:00
|
|
|
./src/H5Tpkg.h
|
2003-02-12 21:44:31 +08:00
|
|
|
./src/H5Tprecis.c
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/H5Tprivate.h
|
|
|
|
./src/H5Tpublic.h
|
2003-02-12 21:44:31 +08:00
|
|
|
./src/H5Tstrpad.c
|
1999-06-05 06:23:42 +08:00
|
|
|
./src/H5Tvlen.c
|
2000-05-12 22:59:07 +08:00
|
|
|
./src/H5TB.c
|
|
|
|
./src/H5TBprivate.h
|
2000-05-19 22:52:03 +08:00
|
|
|
./src/H5TS.c
|
|
|
|
./src/H5TSprivate.h
|
1997-10-21 07:14:35 +08:00
|
|
|
./src/H5V.c
|
|
|
|
./src/H5Vprivate.h
|
1998-04-18 05:29:43 +08:00
|
|
|
./src/H5Z.c
|
2003-02-13 04:07:21 +08:00
|
|
|
./src/H5Zfletcher32.c
|
1999-08-31 03:59:37 +08:00
|
|
|
./src/H5Zdeflate.c
|
2003-04-09 10:38:07 +08:00
|
|
|
./src/H5Zpkg.h
|
1998-04-18 05:29:43 +08:00
|
|
|
./src/H5Zprivate.h
|
|
|
|
./src/H5Zpublic.h
|
2003-04-09 10:38:07 +08:00
|
|
|
./src/H5Zszip.c
|
|
|
|
./src/H5Zshuffle.c
|
1998-02-17 05:26:59 +08:00
|
|
|
./src/H5config.h.in
|
|
|
|
./src/H5detect.c
|
|
|
|
./src/H5private.h
|
|
|
|
./src/H5public.h
|
1997-08-16 00:35:53 +08:00
|
|
|
./src/Makefile.in
|
1998-02-17 05:26:59 +08:00
|
|
|
./src/hdf5.h
|
[svn-r1315] Changes since 19990607
----------------------
./configure.in
./configure [REGENERATED]
./src/libhdf5.settings.in [NEW]
./config/conclude.in
./INSTALL
./MANIFEST
A file called `libhdf5.settings' is installed along with the
libraries and it contains a list of various things that might
be of interest to someone using the library (such as what
compiler/options were used and what other libraries might need
to be linked to satisfy external references). We can add more
things as it becomes necessary. Here's a sample...
SUMMARY OF THE HDF5 CONFIGURATION
=================================
HDF5 Version: hdf5-1.1.106
Configured on: Tue Jun 8 11:38:52 EDT 1999
Configured by: matzke@llnl.gov at Spizella Software
Configure mode: development
Host system: i686-pc-linux-gnulibc1
Byte sex: little-endian
Libraries: static, shared
Parallel support: mpicc
Installation point: /usr/local
Compiler: mpicc (egcs-2.91.66)
Compiler switches: -Wall -g
Extra libraries: -lmfhdf -ldf -lz -ljpeg -lm
Archiver: ar
Ranlib: ranlib
Debugged Packages: d,e,f,g,hg,i,mm,o,p,s,v,z
API Tracing: yes
File addresses: large
1999-06-09 00:14:10 +08:00
|
|
|
./src/libhdf5.settings.in
|
1998-09-08 21:38:29 +08:00
|
|
|
|
1999-11-03 22:30:40 +08:00
|
|
|
./test/Dependencies
|
1997-08-16 00:35:53 +08:00
|
|
|
./test/Makefile.in
|
[svn-r339] Changes since 19980408
----------------------
./src/H5Osdspace.c
./html/H5.format.html
In the past we were allowed to have >2GB files on a 32-bit
machine as long as no dataset within the file was larger than
4GB (or whatever sizeof(size_t) is). That's been fixed now.
All dataset size calculations are done with `hsize_t' which is
normally defined as `unsigned long long'.
./src/H5F.c
./src/H5Ffamily.c
./src/H5Fprivate.h
./src/H5P.c
./src/H5Ppublic.h
The file family member size can now be set/queried. The
default is still 64MB, but it can be set to 1GB by saying:
H5Pset_family (plist, 30, H5P_DEFAULT);
When opening an existing file family the specified
bits-per-member is ignored and the first member of the family
determines the bits-per-member, which can be retrieved with
H5Pget_family().
./acconfig.h
./configure.in
./src/H5config.h
./src/H5public.h
Added `--disable-hsizet' so that those with old GCC compilers
(<2.8.1) can still compile the code.
./src/H5.c
./src/H5private.h
Added HDfprintf() which works just like fprintf() except you
can give `H' as a size modifier for the integer conversions
and supply an `hsize_t' or `hssize_t' argument without casting
it. For instance:
hsize_t npoints = H5Sget_npoints(space);
HDfprintf(stdout,"Dataset has %Hd (%#018Hx) points\n",
npoints, npoints);
You can now give `%a' as a format to print an address, but all
formating flags are ignored and it causes the return value of
HDfprintf() to not include the characters in the address (but
who uses the return value anyway :-). Example:
H5G_t *grp;
HDfprintf(stdout, "Group object header at %a\n",
&(grp->ent.header));
Added HDstrtoll() which works exactly like [HD]strtol() except
the result is an int64.
./src/debug.c
Large addresses can now be entered from the command-line. Use
either decimal, octal (leading `0') or hexadecimal (leading
`0x') when giving the address.
./src/h5ls.c
The printf format for dataset dimensions was changed to `%Hu'
to support large datasets.
./test/big.c [NEW]
A test for big datasets on 32-bit machines. This test is not
run by default. Don't try to run it on an nfs-mounted file
system or other file system that doesn't support holes because
it creates two 32GB datasets of all zero.
1998-04-10 04:22:11 +08:00
|
|
|
./test/big.c
|
1998-06-17 03:38:26 +08:00
|
|
|
./test/bittests.c
|
1998-01-24 03:53:37 +08:00
|
|
|
./test/cmpd_dset.c
|
2003-05-14 04:07:05 +08:00
|
|
|
./test/dangle.c
|
2002-11-20 21:02:20 +08:00
|
|
|
./test/deflate.h5
|
2003-05-14 04:07:05 +08:00
|
|
|
./test/dsets.c
|
1997-12-11 06:38:07 +08:00
|
|
|
./test/dtypes.c
|
2004-05-04 07:34:42 +08:00
|
|
|
./test/dtransform.c
|
1999-01-07 19:37:16 +08:00
|
|
|
./test/enum.c
|
1998-01-31 07:32:28 +08:00
|
|
|
./test/extend.c
|
1998-03-05 00:20:23 +08:00
|
|
|
./test/external.c
|
2003-09-25 03:25:16 +08:00
|
|
|
./test/error_test.c
|
|
|
|
./test/err_compat.c
|
2002-10-01 00:35:50 +08:00
|
|
|
./test/file_handle.c
|
2002-04-12 20:55:21 +08:00
|
|
|
./test/fill_old.h5
|
1998-10-06 05:01:10 +08:00
|
|
|
./test/fillval.c
|
1998-10-26 22:49:52 +08:00
|
|
|
./test/flush1.c
|
|
|
|
./test/flush2.c
|
1999-08-31 13:06:01 +08:00
|
|
|
./test/gass_append.c
|
|
|
|
./test/gass_read.c
|
|
|
|
./test/gass_write.c
|
2002-04-17 22:38:21 +08:00
|
|
|
./test/getname.c
|
1998-04-03 11:29:38 +08:00
|
|
|
./test/gheap.c
|
1998-11-21 11:36:51 +08:00
|
|
|
./test/h5test.c
|
|
|
|
./test/h5test.h
|
1997-10-21 07:14:35 +08:00
|
|
|
./test/hyperslab.c
|
|
|
|
./test/istore.c
|
1998-11-25 22:58:22 +08:00
|
|
|
./test/lheap.c
|
1998-04-15 00:44:46 +08:00
|
|
|
./test/links.c
|
1998-10-15 03:35:08 +08:00
|
|
|
./test/mount.c
|
1998-07-31 00:38:21 +08:00
|
|
|
./test/mtime.c
|
2002-11-07 05:08:45 +08:00
|
|
|
./test/ntypes.c
|
1998-11-25 23:54:11 +08:00
|
|
|
./test/ohdr.c
|
1998-10-27 03:55:54 +08:00
|
|
|
./test/space_overflow.c _DO_NOT_DISTRIBUTE_
|
2002-11-20 21:02:20 +08:00
|
|
|
./test/gen_deflate.c _DO_NOT_DISTRIBUTE_
|
2000-11-10 05:45:27 +08:00
|
|
|
./test/gen_old_array.c _DO_NOT_DISTRIBUTE_
|
|
|
|
./test/gen_new_array.c _DO_NOT_DISTRIBUTE_
|
2002-04-12 20:55:21 +08:00
|
|
|
./test/gen_new_fill.c _DO_NOT_DISTRIBUTE_
|
2004-05-28 04:24:08 +08:00
|
|
|
./test/gen_old_layout.c _DO_NOT_DISTRIBUTE_
|
[svn-r6252] Purpose:
Lots of performance improvements & a couple new internal API interfaces.
Description:
Performance Improvements:
- Cached file offset & length sizes in shared file struct, to avoid
constantly looking them up in the FCPL.
- Generic property improvements:
- Added "revision" number to generic property classes to speed
up comparisons.
- Changed method of storing properties from using a hash-table
to the TBBT routines in the library.
- Share the propery names between classes and the lists derived
from them.
- Removed redundant 'def_value' buffer from each property.
- Switching code to use a "copy on write" strategy for
properties in each list, where the properties in each list
are shared with the properties in the class, until a
property's value is changed in a list.
- Fixed error in layout code which was allocating too many buffers.
- Redefined public macros of the form (H5open()/H5check, <variable>)
internally to only be (<variable>), avoiding innumerable useless
calls to H5open() and H5check_version().
- Reuse already zeroed buffers in H5F_contig_fill instead of
constantly re-zeroing them.
- Don't write fill values if writing entire dataset.
- Use gettimeofday() system call instead of time() system when
checking the modification time of a dataset.
- Added reference counted string API and use it for tracking the
names of objects opening in a file (for the ID->name code).
- Removed redundant H5P_get() calls in B-tree routines.
- Redefine H5T datatype macros internally to the library, to avoid
calling H5check redundantly.
- Keep dataspace information for dataset locally instead of reading
from disk each time. Added new module to track open objects
in a file, to allow this (which will be useful eventually for
some FPH5 metadata caching issues).
- Remove H5AC_find macro which was inlining metadata cache lookups,
and call function instead.
- Remove redundant memset() calls from H5G_namei() routine.
- Remove redundant checking of object type when locating objects
in metadata cache and rely on the address only.
- Create default dataset object to use when default dataset creation
property list is used to create datasets, bypassing querying
for all the property list values.
- Use default I/O vector size when performing raw data with the
default dataset transfer property list, instead of querying for
I/O vector size.
- Remove H5P_DEFAULT internally to the library, replacing it with
more specific default property list based on the type of
property list needed.
- Remove redundant memset() calls in object header message (H5O*)
routines.
- Remove redunant memset() calls in data I/O routines.
- Split free-list allocation routines into malloc() and calloc()-
like routines, instead of one combined routine.
- Remove lots of indirection in H5O*() routines.
- Simplify metadata cache entry comparison routine (used when
flushing entire cache out).
- Only enable metadata cache statistics when H5AC_DEBUG is turned
on, instead of always tracking them.
- Simplify address comparison macro (H5F_addr_eq).
- Remove redundant metadata cache entry protections during dataset
creation by protecting the object header once and making all
the modifications necessary for the dataset creation before
unprotecting it.
- Reduce # of "number of element in extent" computations performed
by computing and storing the value during dataspace creation.
- Simplify checking for group location's file information, when file
has not been involving in file-mounting operations.
- Use binary encoding for modification time, instead of ASCII.
- Hoist H5HL_peek calls (to get information in a local heap)
out of loops in many group routine.
- Use static variable for iterators of selections, instead of
dynamically allocation them each time.
- Lookup & insert new entries in one step, avoiding traversing
group's B-tree twice.
- Fixed memory leak in H5Gget_objname_idx() routine (tangential to
performance improvements, but fixed along the way).
- Use free-list for reference counted strings.
- Don't bother copying object names into cached group entries,
since they are re-created when an object is opened.
The benchmark I used to measure these results created several thousand
small (2K) datasets in a file and wrote out the data for them. This is
Elena's "regular.c" benchmark.
These changes resulted in approximately ~4.3x speedup of the
development branch when compared to the previous code in the
development branch and ~1.4x speedup compared to the release
branch.
Additionally, these changes reduce the total memory used (code and
data) by the development branch by ~800KB, bringing the development
branch back into the same ballpark as the release branch.
I'll send out a more detailed description of the benchmark results
as a followup note.
New internal API routines:
Added "reference counted strings" API for tracking strings that get
used by multiple owners without duplicating the strings.
Added "ternary search tree" API for text->object mappings.
Platforms tested:
Tested h5committest {arabica (fortran), eirene (fortran, C++)
modi4 (parallel, fortran)}
Other platforms/configurations tested?
FreeBSD 4.7 (sleipnir) serial & parallel
Solaris 2.6 (baldric) serial
2003-01-10 01:20:03 +08:00
|
|
|
./test/gen_old_mtime.c _DO_NOT_DISTRIBUTE_
|
|
|
|
./test/gen_new_mtime.c _DO_NOT_DISTRIBUTE_
|
2003-07-16 22:55:30 +08:00
|
|
|
./test/gen_new_super.c _DO_NOT_DISTRIBUTE_
|
2002-04-10 21:33:41 +08:00
|
|
|
./test/set_extent.c
|
2000-04-14 00:13:30 +08:00
|
|
|
./test/srb_append.c
|
|
|
|
./test/srb_read.c
|
|
|
|
./test/srb_write.c
|
1998-11-25 22:58:22 +08:00
|
|
|
./test/stab.c
|
2000-09-17 00:55:24 +08:00
|
|
|
./test/stream_test.c
|
2000-11-10 05:45:27 +08:00
|
|
|
./test/tarray.c
|
|
|
|
./test/tarrold.h5
|
2000-05-23 06:55:33 +08:00
|
|
|
./test/tattr.c
|
2003-01-22 04:19:48 +08:00
|
|
|
./test/tbogus.h5
|
2001-09-26 13:39:48 +08:00
|
|
|
./test/tconfig.c
|
2004-01-07 01:53:13 +08:00
|
|
|
./test/testframe.c
|
1997-08-16 00:35:53 +08:00
|
|
|
./test/testhdf5.c
|
|
|
|
./test/testhdf5.h
|
2003-09-25 03:25:16 +08:00
|
|
|
./test/testerror.sh
|
2001-07-31 04:02:48 +08:00
|
|
|
./test/testmeta.c
|
1997-08-16 00:35:53 +08:00
|
|
|
./test/tfile.c
|
2000-11-12 08:08:59 +08:00
|
|
|
./test/tgenprop.c
|
1998-02-27 02:10:51 +08:00
|
|
|
./test/th5s.c
|
1998-10-27 03:55:54 +08:00
|
|
|
./test/th5s.h5
|
2003-02-25 04:25:13 +08:00
|
|
|
./test/theap.c
|
2000-04-06 04:51:10 +08:00
|
|
|
./test/titerate.c
|
2004-05-28 04:24:08 +08:00
|
|
|
./test/tlayouto.h5
|
1997-08-16 00:35:53 +08:00
|
|
|
./test/tmeta.c
|
2002-01-25 22:54:58 +08:00
|
|
|
./test/tmisc.c
|
[svn-r6252] Purpose:
Lots of performance improvements & a couple new internal API interfaces.
Description:
Performance Improvements:
- Cached file offset & length sizes in shared file struct, to avoid
constantly looking them up in the FCPL.
- Generic property improvements:
- Added "revision" number to generic property classes to speed
up comparisons.
- Changed method of storing properties from using a hash-table
to the TBBT routines in the library.
- Share the propery names between classes and the lists derived
from them.
- Removed redundant 'def_value' buffer from each property.
- Switching code to use a "copy on write" strategy for
properties in each list, where the properties in each list
are shared with the properties in the class, until a
property's value is changed in a list.
- Fixed error in layout code which was allocating too many buffers.
- Redefined public macros of the form (H5open()/H5check, <variable>)
internally to only be (<variable>), avoiding innumerable useless
calls to H5open() and H5check_version().
- Reuse already zeroed buffers in H5F_contig_fill instead of
constantly re-zeroing them.
- Don't write fill values if writing entire dataset.
- Use gettimeofday() system call instead of time() system when
checking the modification time of a dataset.
- Added reference counted string API and use it for tracking the
names of objects opening in a file (for the ID->name code).
- Removed redundant H5P_get() calls in B-tree routines.
- Redefine H5T datatype macros internally to the library, to avoid
calling H5check redundantly.
- Keep dataspace information for dataset locally instead of reading
from disk each time. Added new module to track open objects
in a file, to allow this (which will be useful eventually for
some FPH5 metadata caching issues).
- Remove H5AC_find macro which was inlining metadata cache lookups,
and call function instead.
- Remove redundant memset() calls from H5G_namei() routine.
- Remove redundant checking of object type when locating objects
in metadata cache and rely on the address only.
- Create default dataset object to use when default dataset creation
property list is used to create datasets, bypassing querying
for all the property list values.
- Use default I/O vector size when performing raw data with the
default dataset transfer property list, instead of querying for
I/O vector size.
- Remove H5P_DEFAULT internally to the library, replacing it with
more specific default property list based on the type of
property list needed.
- Remove redundant memset() calls in object header message (H5O*)
routines.
- Remove redunant memset() calls in data I/O routines.
- Split free-list allocation routines into malloc() and calloc()-
like routines, instead of one combined routine.
- Remove lots of indirection in H5O*() routines.
- Simplify metadata cache entry comparison routine (used when
flushing entire cache out).
- Only enable metadata cache statistics when H5AC_DEBUG is turned
on, instead of always tracking them.
- Simplify address comparison macro (H5F_addr_eq).
- Remove redundant metadata cache entry protections during dataset
creation by protecting the object header once and making all
the modifications necessary for the dataset creation before
unprotecting it.
- Reduce # of "number of element in extent" computations performed
by computing and storing the value during dataspace creation.
- Simplify checking for group location's file information, when file
has not been involving in file-mounting operations.
- Use binary encoding for modification time, instead of ASCII.
- Hoist H5HL_peek calls (to get information in a local heap)
out of loops in many group routine.
- Use static variable for iterators of selections, instead of
dynamically allocation them each time.
- Lookup & insert new entries in one step, avoiding traversing
group's B-tree twice.
- Fixed memory leak in H5Gget_objname_idx() routine (tangential to
performance improvements, but fixed along the way).
- Use free-list for reference counted strings.
- Don't bother copying object names into cached group entries,
since they are re-created when an object is opened.
The benchmark I used to measure these results created several thousand
small (2K) datasets in a file and wrote out the data for them. This is
Elena's "regular.c" benchmark.
These changes resulted in approximately ~4.3x speedup of the
development branch when compared to the previous code in the
development branch and ~1.4x speedup compared to the release
branch.
Additionally, these changes reduce the total memory used (code and
data) by the development branch by ~800KB, bringing the development
branch back into the same ballpark as the release branch.
I'll send out a more detailed description of the benchmark results
as a followup note.
New internal API routines:
Added "reference counted strings" API for tracking strings that get
used by multiple owners without duplicating the strings.
Added "ternary search tree" API for text->object mappings.
Platforms tested:
Tested h5committest {arabica (fortran), eirene (fortran, C++)
modi4 (parallel, fortran)}
Other platforms/configurations tested?
FreeBSD 4.7 (sleipnir) serial & parallel
Solaris 2.6 (baldric) serial
2003-01-10 01:20:03 +08:00
|
|
|
./test/tmtimen.h5
|
|
|
|
./test/tmtimeo.h5
|
2000-10-20 00:42:33 +08:00
|
|
|
./test/ttime.c
|
1998-10-14 05:27:53 +08:00
|
|
|
./test/trefer.c
|
2003-01-10 21:27:27 +08:00
|
|
|
./test/trefstr.c
|
1998-07-15 13:42:11 +08:00
|
|
|
./test/tselect.c
|
2000-05-23 06:55:33 +08:00
|
|
|
./test/ttbbt.c
|
2003-01-10 21:27:27 +08:00
|
|
|
./test/ttst.c
|
2000-05-23 06:55:33 +08:00
|
|
|
./test/ttsafe.c
|
|
|
|
./test/ttsafe.h
|
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|
|
./test/ttsafe_acreate.c
|
|
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./test/ttsafe_cancel.c
|
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./test/ttsafe_dcreate.c
|
|
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|
./test/ttsafe_error.c
|
1999-10-07 00:38:04 +08:00
|
|
|
./test/tvlstr.c
|
1999-06-12 06:03:53 +08:00
|
|
|
./test/tvltypes.c
|
1998-09-28 22:20:21 +08:00
|
|
|
./test/unlink.c
|
2004-03-11 05:48:29 +08:00
|
|
|
./test/test_filters_le.hdf5
|
|
|
|
./test/test_filters_be.hdf5
|
2004-03-27 00:32:33 +08:00
|
|
|
./test/gen_filters.c
|
1998-09-08 21:38:29 +08:00
|
|
|
|
2003-09-25 03:25:16 +08:00
|
|
|
./test/testfiles/err_compat_1
|
|
|
|
./test/testfiles/err_compat_2
|
|
|
|
./test/testfiles/error_test_1
|
|
|
|
./test/testfiles/error_test_2
|
|
|
|
|
1999-11-03 22:30:40 +08:00
|
|
|
./testpar/Dependencies
|
1998-11-13 23:06:06 +08:00
|
|
|
./testpar/Makefile.in
|
1998-07-03 09:16:22 +08:00
|
|
|
./testpar/t_dset.c
|
|
|
|
./testpar/t_file.c
|
2003-04-18 21:34:08 +08:00
|
|
|
./testpar/t_fphdf5.c
|
1999-12-17 22:35:54 +08:00
|
|
|
./testpar/t_mdset.c
|
1999-02-17 12:39:22 +08:00
|
|
|
./testpar/t_mpi.c
|
2003-04-18 11:07:43 +08:00
|
|
|
./testpar/t_ph5basic.c
|
1998-02-18 04:31:44 +08:00
|
|
|
./testpar/testphdf5.c
|
1998-07-03 09:16:22 +08:00
|
|
|
./testpar/testphdf5.h
|
2002-07-15 23:30:03 +08:00
|
|
|
./testpar/testph5.sh.in
|
1998-09-08 21:38:29 +08:00
|
|
|
|
1999-11-03 22:30:40 +08:00
|
|
|
./tools/Dependencies
|
1998-07-13 23:35:21 +08:00
|
|
|
./tools/Makefile.in
|
2001-02-23 06:09:28 +08:00
|
|
|
|
2001-05-13 01:55:47 +08:00
|
|
|
./tools/gifconv/Dependencies
|
|
|
|
./tools/gifconv/Makefile.in
|
|
|
|
./tools/gifconv/decompress.c
|
2001-05-13 03:12:25 +08:00
|
|
|
./tools/gifconv/gif.h
|
2001-05-13 01:55:47 +08:00
|
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|
./tools/gifconv/gif2hdf.c
|
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|
./tools/gifconv/gif2mem.c
|
|
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|
./tools/gifconv/gifread.c
|
|
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|
./tools/gifconv/hdf2gif.c
|
|
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|
./tools/gifconv/hdfgifwr.c
|
|
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|
./tools/gifconv/readhdf.c
|
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|
./tools/gifconv/writehdf.c
|
|
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|
|
2001-02-23 06:09:28 +08:00
|
|
|
./tools/h5dump/Dependencies
|
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|
./tools/h5dump/Makefile.in
|
|
|
|
./tools/h5dump/h5dump.c
|
|
|
|
./tools/h5dump/h5dump.h
|
2002-10-21 07:58:11 +08:00
|
|
|
./tools/h5dump/h5dumpgentest.c
|
2004-06-09 21:47:20 +08:00
|
|
|
./tools/h5dump/testh5dump.sh.in
|
2003-07-30 05:24:21 +08:00
|
|
|
./tools/h5dump/testh5dumpxml.sh
|
2001-02-23 06:09:28 +08:00
|
|
|
|
2003-04-04 04:00:42 +08:00
|
|
|
./tools/h5import/Dependencies
|
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|
./tools/h5import/Makefile.in
|
|
|
|
./tools/h5import/h5import.h
|
|
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|
./tools/h5import/h5import.c
|
|
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|
./tools/h5import/h5importtest.c
|
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|
./tools/h5import/h5importtestutil.sh
|
|
|
|
./tools/h5import/testfiles/conbfp32
|
|
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|
./tools/h5import/testfiles/conbfp64
|
|
|
|
./tools/h5import/testfiles/conbin16
|
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|
./tools/h5import/testfiles/conbin32
|
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|
./tools/h5import/testfiles/conbin8
|
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|
./tools/h5import/testfiles/conbuin16
|
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./tools/h5import/testfiles/conbuin32
|
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./tools/h5import/testfiles/fp1
|
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|
./tools/h5import/testfiles/fp2
|
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|
./tools/h5import/testfiles/in1
|
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|
./tools/h5import/testfiles/textfp32
|
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|
./tools/h5import/testfiles/textfp64
|
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|
./tools/h5import/testfiles/textin16
|
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|
./tools/h5import/testfiles/textin32
|
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|
./tools/h5import/testfiles/textin8
|
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./tools/h5import/testfiles/textuin16
|
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|
./tools/h5import/testfiles/textuin32
|
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|
./tools/h5import/testfiles/test1.h5
|
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|
./tools/h5import/testfiles/test2.h5
|
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|
./tools/h5import/testfiles/test3.h5
|
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./tools/h5import/testfiles/test4.h5
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./tools/h5import/testfiles/test5.h5
|
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./tools/h5import/testfiles/test6.h5
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./tools/h5import/testfiles/test7.h5
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./tools/h5import/testfiles/test8.h5
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./tools/h5import/testfiles/test9.h5
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./tools/h5import/testfiles/test10.h5
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./tools/h5import/testfiles/test11.h5
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./tools/h5import/testfiles/test12.h5
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|
./tools/h5import/testfiles/test13.h5
|
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|
2002-10-14 22:58:04 +08:00
|
|
|
./tools/h5diff/Dependencies
|
2002-10-10 23:35:25 +08:00
|
|
|
./tools/h5diff/Makefile.in
|
2003-10-23 05:58:07 +08:00
|
|
|
./tools/h5diff/h5diff_main.c
|
2003-12-03 07:23:15 +08:00
|
|
|
./tools/h5diff/testh5diff_util.c
|
|
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|
./tools/h5diff/testh5diff_main.c
|
|
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|
./tools/h5diff/testh5diff_dset.c
|
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|
./tools/h5diff/testh5diff_basic.c
|
|
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./tools/h5diff/testh5diff_attr.c
|
|
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|
./tools/h5diff/testh5diff.h
|
2002-10-10 23:35:25 +08:00
|
|
|
./tools/h5diff/testh5diff.sh
|
|
|
|
|
2003-09-20 05:59:58 +08:00
|
|
|
./tools/h5repack/Dependencies
|
2003-09-20 03:32:25 +08:00
|
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|
./tools/h5repack/Makefile.in
|
|
|
|
./tools/h5repack/h5repack.sh
|
2003-12-05 03:35:33 +08:00
|
|
|
./tools/h5repack/h5repack.h
|
2003-09-20 03:32:25 +08:00
|
|
|
./tools/h5repack/h5repack.c
|
2003-12-31 07:01:09 +08:00
|
|
|
./tools/h5repack/h5repack_layout.c
|
2003-10-23 05:58:07 +08:00
|
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|
./tools/h5repack/h5repack_list.c
|
2003-12-30 04:30:40 +08:00
|
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|
./tools/h5repack/h5repack_filters.c
|
|
|
|
./tools/h5repack/h5repack_verify.c
|
2003-12-05 03:35:33 +08:00
|
|
|
./tools/h5repack/h5repack_copy.c
|
2003-12-17 02:12:37 +08:00
|
|
|
./tools/h5repack/h5repack_refs.c
|
2003-10-23 05:58:07 +08:00
|
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|
./tools/h5repack/h5repack_main.c
|
|
|
|
./tools/h5repack/h5repack_opttable.c
|
|
|
|
./tools/h5repack/h5repack_parse.c
|
2003-12-17 02:12:37 +08:00
|
|
|
./tools/h5repack/testh5repack_attr.c
|
|
|
|
./tools/h5repack/testh5repack_dset.c
|
|
|
|
./tools/h5repack/testh5repack_filters.c
|
2003-12-30 04:30:40 +08:00
|
|
|
./tools/h5repack/testh5repack_make.c
|
2003-12-17 02:12:37 +08:00
|
|
|
./tools/h5repack/testh5repack_main.c
|
2004-04-08 05:36:15 +08:00
|
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|
./tools/h5repack/testh5repack_layout.c
|
|
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./tools/h5repack/testh5repack_util.c
|
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|
2003-10-23 05:58:07 +08:00
|
|
|
|
2003-09-20 03:32:25 +08:00
|
|
|
|
2001-02-23 06:09:28 +08:00
|
|
|
./tools/h5ls/Dependencies
|
|
|
|
./tools/h5ls/Makefile.in
|
|
|
|
./tools/h5ls/h5ls.c
|
|
|
|
./tools/h5ls/testh5ls.sh
|
|
|
|
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|
|
|
./tools/lib/Dependencies
|
|
|
|
./tools/lib/Makefile.in
|
|
|
|
./tools/lib/h5tools.c
|
|
|
|
./tools/lib/h5tools.h
|
|
|
|
./tools/lib/h5tools_str.c
|
|
|
|
./tools/lib/h5tools_str.h
|
2001-03-10 00:47:46 +08:00
|
|
|
./tools/lib/h5tools_utils.c
|
|
|
|
./tools/lib/h5tools_utils.h
|
2003-10-29 02:39:05 +08:00
|
|
|
./tools/lib/talign.c
|
2003-10-29 01:40:05 +08:00
|
|
|
./tools/lib/h5diff.c
|
|
|
|
./tools/lib/h5diff_array.c
|
2003-11-04 06:10:57 +08:00
|
|
|
./tools/lib/h5diff_attr.c
|
2003-10-29 01:40:05 +08:00
|
|
|
./tools/lib/h5diff_dset.c
|
|
|
|
./tools/lib/h5diff_util.c
|
|
|
|
./tools/lib/h5trav.c
|
|
|
|
./tools/lib/h5trav_table.c
|
|
|
|
./tools/lib/h5trav.h
|
|
|
|
./tools/lib/h5diff.h
|
2004-03-03 02:12:25 +08:00
|
|
|
./tools/lib/h5tools_filters.c
|
2001-02-23 06:09:28 +08:00
|
|
|
|
|
|
|
./tools/misc/Dependencies
|
|
|
|
./tools/misc/Makefile.in
|
2003-04-10 08:48:46 +08:00
|
|
|
./tools/misc/h5cc.in
|
2001-02-23 06:09:28 +08:00
|
|
|
./tools/misc/h5debug.c
|
|
|
|
./tools/misc/h5import.c
|
2002-06-14 23:12:59 +08:00
|
|
|
./tools/misc/h5redeploy.in
|
2001-02-23 06:09:28 +08:00
|
|
|
./tools/misc/h5repart.c
|
|
|
|
./tools/misc/pdb2hdf.c
|
1998-09-10 01:31:19 +08:00
|
|
|
|
1998-10-01 02:50:49 +08:00
|
|
|
./tools/testfiles/tall-1.ddl
|
|
|
|
./tools/testfiles/tall-2.ddl
|
|
|
|
./tools/testfiles/tall-3.ddl
|
2001-04-25 07:10:15 +08:00
|
|
|
./tools/testfiles/tall-4s.ddl
|
|
|
|
./tools/testfiles/tall-5s.ddl
|
1998-09-10 01:31:19 +08:00
|
|
|
./tools/testfiles/tall.h5
|
2000-11-22 05:56:05 +08:00
|
|
|
./tools/testfiles/tarray1.ddl
|
|
|
|
./tools/testfiles/tarray1.h5
|
|
|
|
./tools/testfiles/tarray1.ls
|
|
|
|
./tools/testfiles/tarray2.ddl
|
|
|
|
./tools/testfiles/tarray2.h5
|
|
|
|
./tools/testfiles/tarray3.ddl
|
|
|
|
./tools/testfiles/tarray3.h5
|
|
|
|
./tools/testfiles/tarray4.ddl
|
|
|
|
./tools/testfiles/tarray4.h5
|
2000-12-02 23:11:16 +08:00
|
|
|
./tools/testfiles/tarray5.ddl
|
2000-11-22 05:56:05 +08:00
|
|
|
./tools/testfiles/tarray5.h5
|
|
|
|
./tools/testfiles/tarray6.ddl
|
|
|
|
./tools/testfiles/tarray6.h5
|
|
|
|
./tools/testfiles/tarray7.ddl
|
|
|
|
./tools/testfiles/tarray7.h5
|
1998-10-01 02:50:49 +08:00
|
|
|
./tools/testfiles/tattr-1.ddl
|
|
|
|
./tools/testfiles/tattr-2.ddl
|
|
|
|
./tools/testfiles/tattr-3.ddl
|
1998-09-10 01:31:19 +08:00
|
|
|
./tools/testfiles/tattr.h5
|
2000-06-01 00:23:52 +08:00
|
|
|
./tools/testfiles/tbitfields-1.ddl
|
|
|
|
./tools/testfiles/tbitfields.h5
|
2003-05-01 06:37:06 +08:00
|
|
|
./tools/testfiles/tchar.h5
|
|
|
|
./tools/testfiles/tchar1.ddl
|
1998-10-29 14:39:43 +08:00
|
|
|
./tools/testfiles/tcomp-1.ddl
|
|
|
|
./tools/testfiles/tcomp-2.ddl
|
|
|
|
./tools/testfiles/tcomp-3.ddl
|
2003-08-26 04:01:53 +08:00
|
|
|
./tools/testfiles/tcomp-4.ddl
|
1998-10-29 14:39:43 +08:00
|
|
|
./tools/testfiles/tcompound.h5
|
1998-12-15 00:19:21 +08:00
|
|
|
./tools/testfiles/tcompound2.h5
|
2003-08-26 04:01:53 +08:00
|
|
|
./tools/testfiles/tcompound_complex.h5
|
1999-07-06 22:31:20 +08:00
|
|
|
./tools/testfiles/tdatareg.h5
|
|
|
|
./tools/testfiles/tdatareg.ddl
|
1998-10-01 02:50:49 +08:00
|
|
|
./tools/testfiles/tdset-1.ddl
|
|
|
|
./tools/testfiles/tdset-2.ddl
|
2001-04-25 07:10:15 +08:00
|
|
|
./tools/testfiles/tdset-3s.ddl
|
1998-09-10 01:31:19 +08:00
|
|
|
./tools/testfiles/tdset.h5
|
2001-04-25 07:10:15 +08:00
|
|
|
./tools/testfiles/tdset2-1s.ddl
|
1998-12-15 00:19:21 +08:00
|
|
|
./tools/testfiles/tdset2.h5
|
2001-01-04 22:16:24 +08:00
|
|
|
./tools/testfiles/tempty.ddl
|
|
|
|
./tools/testfiles/tempty.h5
|
|
|
|
./tools/testfiles/tempty.ls
|
1999-07-06 22:31:20 +08:00
|
|
|
./tools/testfiles/tenum.h5
|
|
|
|
./tools/testfiles/tenum.ddl
|
2002-02-26 06:40:32 +08:00
|
|
|
./tools/testfiles/tfamily.ddl
|
|
|
|
./tools/testfiles/tfamily00000.h5
|
|
|
|
./tools/testfiles/tfamily00001.h5
|
|
|
|
./tools/testfiles/tfamily00002.h5
|
|
|
|
./tools/testfiles/tfamily00003.h5
|
|
|
|
./tools/testfiles/tfamily00004.h5
|
|
|
|
./tools/testfiles/tfamily00005.h5
|
|
|
|
./tools/testfiles/tfamily00006.h5
|
|
|
|
./tools/testfiles/tfamily00007.h5
|
|
|
|
./tools/testfiles/tfamily00008.h5
|
|
|
|
./tools/testfiles/tfamily00009.h5
|
|
|
|
./tools/testfiles/tfamily00010.h5
|
1998-10-01 02:50:49 +08:00
|
|
|
./tools/testfiles/tgroup-1.ddl
|
|
|
|
./tools/testfiles/tgroup-2.ddl
|
1998-09-10 01:31:19 +08:00
|
|
|
./tools/testfiles/tgroup.h5
|
2002-01-06 00:33:50 +08:00
|
|
|
./tools/testfiles/tgrp_comments.ddl
|
|
|
|
./tools/testfiles/tgrp_comments.h5
|
1998-10-29 14:39:43 +08:00
|
|
|
./tools/testfiles/thlink-1.ddl
|
|
|
|
./tools/testfiles/thlink-2.ddl
|
|
|
|
./tools/testfiles/thlink-3.ddl
|
|
|
|
./tools/testfiles/thlink-4.ddl
|
|
|
|
./tools/testfiles/thlink-5.ddl
|
|
|
|
./tools/testfiles/thlink.h5
|
2002-03-01 01:25:40 +08:00
|
|
|
./tools/testfiles/tlarge_objname.ddl
|
|
|
|
./tools/testfiles/tlarge_objname.h5
|
1998-12-22 06:49:13 +08:00
|
|
|
./tools/testfiles/tloop-1.ddl
|
1999-01-07 05:58:34 +08:00
|
|
|
./tools/testfiles/tloop.h5
|
|
|
|
./tools/testfiles/tloop2.h5
|
|
|
|
./tools/testfiles/tmany.h5
|
2002-02-26 07:06:26 +08:00
|
|
|
./tools/testfiles/tmulti-b.h5
|
|
|
|
./tools/testfiles/tmulti.ddl
|
|
|
|
./tools/testfiles/tmulti-g.h5
|
|
|
|
./tools/testfiles/tmulti-l.h5
|
|
|
|
./tools/testfiles/tmulti-o.h5
|
|
|
|
./tools/testfiles/tmulti-r.h5
|
|
|
|
./tools/testfiles/tmulti-s.h5
|
2000-03-22 01:51:03 +08:00
|
|
|
./tools/testfiles/tnestcomp-1.ddl
|
|
|
|
./tools/testfiles/tnestedcomp.h5
|
2002-10-16 13:43:26 +08:00
|
|
|
./tools/testfiles/tnofilename.ddl
|
1999-07-06 22:31:20 +08:00
|
|
|
./tools/testfiles/tobjref.h5
|
|
|
|
./tools/testfiles/tobjref.ddl
|
2000-05-05 01:10:34 +08:00
|
|
|
./tools/testfiles/topaque.h5
|
|
|
|
./tools/testfiles/topaque.ddl
|
2000-10-25 06:09:46 +08:00
|
|
|
./tools/testfiles/tsaf.ddl
|
|
|
|
./tools/testfiles/tsaf.h5
|
1998-10-01 02:50:49 +08:00
|
|
|
./tools/testfiles/tslink-1.ddl
|
|
|
|
./tools/testfiles/tslink-2.ddl
|
1998-09-10 01:31:19 +08:00
|
|
|
./tools/testfiles/tslink.h5
|
2002-02-26 06:40:32 +08:00
|
|
|
./tools/testfiles/tsplit_file-m.h5
|
|
|
|
./tools/testfiles/tsplit_file-r.h5
|
|
|
|
./tools/testfiles/tsplit_file.ddl
|
1999-02-01 16:59:55 +08:00
|
|
|
./tools/testfiles/tstr-1.ddl
|
|
|
|
./tools/testfiles/tstr.h5
|
1999-02-03 03:37:20 +08:00
|
|
|
./tools/testfiles/tstr2.h5
|
2000-11-22 05:56:05 +08:00
|
|
|
./tools/testfiles/tstr-2.ddl
|
|
|
|
./tools/testfiles/tvldtypes1.ddl
|
|
|
|
./tools/testfiles/tvldtypes1.h5
|
|
|
|
./tools/testfiles/tvldtypes1.ls
|
|
|
|
./tools/testfiles/tvldtypes2.ddl
|
|
|
|
./tools/testfiles/tvldtypes2.h5
|
|
|
|
./tools/testfiles/tvldtypes3.ddl
|
|
|
|
./tools/testfiles/tvldtypes3.h5
|
|
|
|
./tools/testfiles/tvldtypes4.ddl
|
|
|
|
./tools/testfiles/tvldtypes4.h5
|
2003-11-14 20:09:56 +08:00
|
|
|
./tools/testfiles/tvldtypes5.ddl
|
|
|
|
./tools/testfiles/tvldtypes5.h5
|
2002-11-19 00:38:11 +08:00
|
|
|
./tools/testfiles/tvlstr.h5
|
|
|
|
./tools/testfiles/tvlstr.ddl
|
2003-05-23 06:20:51 +08:00
|
|
|
./tools/testfiles/tattr2.h5
|
2003-07-30 05:24:21 +08:00
|
|
|
./tools/testfiles/tall-2A.ddl
|
2004-06-08 00:40:25 +08:00
|
|
|
./tools/testfiles/tboot.ddl
|
|
|
|
./tools/testfiles/tcontents.ddl
|
|
|
|
./tools/testfiles/tfilters.h5
|
|
|
|
|
1999-06-14 08:47:43 +08:00
|
|
|
|
2000-11-01 00:18:33 +08:00
|
|
|
# Expected output from h5ls tests
|
|
|
|
./tools/testfiles/help-1.ls
|
|
|
|
./tools/testfiles/help-2.ls
|
|
|
|
./tools/testfiles/help-3.ls
|
|
|
|
./tools/testfiles/tall-1.ls
|
|
|
|
./tools/testfiles/tall-2.ls
|
|
|
|
./tools/testfiles/tcomp-1.ls
|
|
|
|
./tools/testfiles/tdset-1.ls
|
|
|
|
./tools/testfiles/tgroup-1.ls
|
|
|
|
./tools/testfiles/tgroup.ls
|
|
|
|
./tools/testfiles/thlink-1.ls
|
|
|
|
./tools/testfiles/tloop-1.ls
|
|
|
|
./tools/testfiles/tnestcomp-1.ls
|
|
|
|
./tools/testfiles/tsaf.ls
|
|
|
|
./tools/testfiles/tslink-1.ls
|
|
|
|
./tools/testfiles/tstr-1.ls
|
2003-05-23 06:20:51 +08:00
|
|
|
./tools/testfiles/tattr2.ls
|
2000-11-01 00:18:33 +08:00
|
|
|
|
2001-02-15 04:48:22 +08:00
|
|
|
#additional test input and output for h5dump XML
|
|
|
|
./tools/testfiles/tall.h5.xml
|
|
|
|
./tools/testfiles/tarray1.h5.xml
|
|
|
|
./tools/testfiles/tarray2.h5.xml
|
|
|
|
./tools/testfiles/tarray3.h5.xml
|
|
|
|
./tools/testfiles/tarray6.h5.xml
|
|
|
|
./tools/testfiles/tarray7.h5.xml
|
|
|
|
./tools/testfiles/tattr.h5.xml
|
|
|
|
./tools/testfiles/tbitfields.h5.xml
|
|
|
|
./tools/testfiles/tcompound.h5.xml
|
|
|
|
./tools/testfiles/tcompound2.h5.xml
|
2003-08-26 04:01:53 +08:00
|
|
|
./tools/testfiles/tcompound_complex.h5.xml
|
2001-02-15 04:48:22 +08:00
|
|
|
./tools/testfiles/tdatareg.h5.xml
|
|
|
|
./tools/testfiles/tdset.h5.xml
|
|
|
|
./tools/testfiles/tdset2.h5.xml
|
|
|
|
./tools/testfiles/tempty.h5.xml
|
|
|
|
./tools/testfiles/tenum.h5.xml
|
|
|
|
./tools/testfiles/tgroup.h5.xml
|
|
|
|
./tools/testfiles/thlink.h5.xml
|
|
|
|
./tools/testfiles/tloop.h5.xml
|
|
|
|
./tools/testfiles/tloop2.h5.xml
|
|
|
|
./tools/testfiles/tmany.h5.xml
|
|
|
|
./tools/testfiles/tname-amp.h5
|
|
|
|
./tools/testfiles/tname-amp.h5.xml
|
|
|
|
./tools/testfiles/tname-apos.h5
|
|
|
|
./tools/testfiles/tname-apos.h5.xml
|
|
|
|
./tools/testfiles/tname-gt.h5
|
|
|
|
./tools/testfiles/tname-gt.h5.xml
|
|
|
|
./tools/testfiles/tname-lt.h5
|
|
|
|
./tools/testfiles/tname-lt.h5.xml
|
|
|
|
./tools/testfiles/tname-quot.h5
|
|
|
|
./tools/testfiles/tname-quot.h5.xml
|
|
|
|
./tools/testfiles/tname-sp.h5
|
|
|
|
./tools/testfiles/tname-sp.h5.xml
|
2003-10-06 21:55:23 +08:00
|
|
|
./tools/testfiles/tnamed_dtype_attr.ddl
|
|
|
|
./tools/testfiles/tnamed_dtype_attr.h5
|
|
|
|
./tools/testfiles/tnamed_dtype_attr.h5.xml
|
2001-02-15 04:48:22 +08:00
|
|
|
./tools/testfiles/tnestedcomp.h5.xml
|
|
|
|
./tools/testfiles/tnodata.h5
|
|
|
|
./tools/testfiles/tnodata.h5.xml
|
|
|
|
./tools/testfiles/tobjref.h5.xml
|
|
|
|
./tools/testfiles/topaque.h5.xml
|
|
|
|
./tools/testfiles/tref-escapes-at.h5
|
|
|
|
./tools/testfiles/tref-escapes-at.h5.xml
|
|
|
|
./tools/testfiles/tref-escapes.h5
|
|
|
|
./tools/testfiles/tref-escapes.h5.xml
|
|
|
|
./tools/testfiles/tref.h5
|
|
|
|
./tools/testfiles/tref.h5.xml
|
|
|
|
./tools/testfiles/tsaf.h5.xml
|
|
|
|
./tools/testfiles/tslink.h5.xml
|
|
|
|
./tools/testfiles/tstr.h5.xml
|
|
|
|
./tools/testfiles/tstr2.h5.xml
|
|
|
|
./tools/testfiles/tstring-at.h5
|
|
|
|
./tools/testfiles/tstring-at.h5.xml
|
|
|
|
./tools/testfiles/tstring.h5
|
|
|
|
./tools/testfiles/tstring.h5.xml
|
|
|
|
./tools/testfiles/tvldtypes1.h5.xml
|
|
|
|
./tools/testfiles/tvldtypes2.h5.xml
|
|
|
|
./tools/testfiles/tvldtypes3.h5.xml
|
2003-11-14 20:09:56 +08:00
|
|
|
./tools/testfiles/tvldtypes4.h5.xml
|
|
|
|
./tools/testfiles/tvldtypes5.h5.xml
|
2002-11-19 00:38:11 +08:00
|
|
|
./tools/testfiles/tvlstr.h5.xml
|
2003-07-30 05:24:21 +08:00
|
|
|
./tools/testfiles/tname-amp.h5
|
|
|
|
./tools/testfiles/tname-apos.h5
|
|
|
|
./tools/testfiles/tname-gt.h5
|
|
|
|
./tools/testfiles/tname-lt.h5
|
|
|
|
./tools/testfiles/tname-quot.h5
|
|
|
|
./tools/testfiles/tname-sp.h5
|
|
|
|
./tools/testfiles/tnodata.h5
|
|
|
|
./tools/testfiles/tref-escapes-at.h5
|
|
|
|
./tools/testfiles/tref-escapes.h5
|
|
|
|
./tools/testfiles/tref.h5
|
|
|
|
./tools/testfiles/tstring-at.h5
|
|
|
|
./tools/testfiles/tstring.h5
|
|
|
|
./tools/testfiles/tempty-dtd.h5.xml
|
|
|
|
./tools/testfiles/tempty-dtd-uri.h5.xml
|
|
|
|
./tools/testfiles/tempty-nons.h5.xml
|
|
|
|
./tools/testfiles/tempty-nons-uri.h5.xml
|
|
|
|
./tools/testfiles/tempty-ns.h5.xml
|
|
|
|
./tools/testfiles/tempty-dtd-2.h5.xml
|
|
|
|
./tools/testfiles/tempty-nons-2.h5.xml
|
|
|
|
./tools/testfiles/tempty-ns-2.h5.xml
|
|
|
|
./tools/testfiles/tall-2A.h5.xml
|
2001-07-06 00:36:40 +08:00
|
|
|
|
2003-04-03 02:39:23 +08:00
|
|
|
#test files for h5diff
|
2003-05-19 13:25:35 +08:00
|
|
|
./tools/testfiles/file1.h5
|
|
|
|
./tools/testfiles/file2.h5
|
|
|
|
./tools/testfiles/file3.h5
|
|
|
|
./tools/testfiles/file4.h5
|
|
|
|
./tools/testfiles/file5.h5
|
|
|
|
./tools/testfiles/file6.h5
|
2003-12-03 07:23:15 +08:00
|
|
|
./tools/testfiles/file7.h5
|
|
|
|
./tools/testfiles/file8.h5
|
2003-05-19 13:25:35 +08:00
|
|
|
./tools/testfiles/h5diff_10.txt
|
|
|
|
./tools/testfiles/h5diff_11.txt
|
|
|
|
./tools/testfiles/h5diff_12.txt
|
|
|
|
./tools/testfiles/h5diff_13.txt
|
2003-04-10 11:14:20 +08:00
|
|
|
./tools/testfiles/h5diff_14.txt
|
|
|
|
./tools/testfiles/h5diff_15.txt
|
|
|
|
./tools/testfiles/h5diff_16.txt
|
2003-05-19 13:25:35 +08:00
|
|
|
./tools/testfiles/h5diff_20.txt
|
|
|
|
./tools/testfiles/h5diff_21.txt
|
|
|
|
./tools/testfiles/h5diff_22.txt
|
|
|
|
./tools/testfiles/h5diff_23.txt
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|
|
|
./tools/testfiles/h5diff_24.txt
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|
|
|
./tools/testfiles/h5diff_25.txt
|
|
|
|
./tools/testfiles/h5diff_50.txt
|
|
|
|
./tools/testfiles/h5diff_51.txt
|
|
|
|
./tools/testfiles/h5diff_52.txt
|
|
|
|
./tools/testfiles/h5diff_53.txt
|
|
|
|
./tools/testfiles/h5diff_54.txt
|
|
|
|
./tools/testfiles/h5diff_55.txt
|
|
|
|
./tools/testfiles/h5diff_56.txt
|
2003-05-30 05:46:56 +08:00
|
|
|
./tools/testfiles/h5diff_57.txt
|
2003-05-19 13:25:35 +08:00
|
|
|
./tools/testfiles/h5diff_600.txt
|
|
|
|
./tools/testfiles/h5diff_601.txt
|
|
|
|
./tools/testfiles/h5diff_602.txt
|
|
|
|
./tools/testfiles/h5diff_603.txt
|
|
|
|
./tools/testfiles/h5diff_604.txt
|
|
|
|
./tools/testfiles/h5diff_605.txt
|
|
|
|
./tools/testfiles/h5diff_606.txt
|
|
|
|
./tools/testfiles/h5diff_607.txt
|
|
|
|
./tools/testfiles/h5diff_608.txt
|
|
|
|
./tools/testfiles/h5diff_609.txt
|
|
|
|
./tools/testfiles/h5diff_610.txt
|
|
|
|
./tools/testfiles/h5diff_611.txt
|
|
|
|
./tools/testfiles/h5diff_612.txt
|
|
|
|
./tools/testfiles/h5diff_613.txt
|
|
|
|
./tools/testfiles/h5diff_614.txt
|
|
|
|
./tools/testfiles/h5diff_615.txt
|
|
|
|
./tools/testfiles/h5diff_616.txt
|
|
|
|
./tools/testfiles/h5diff_617.txt
|
|
|
|
./tools/testfiles/h5diff_618.txt
|
|
|
|
./tools/testfiles/h5diff_619.txt
|
|
|
|
./tools/testfiles/h5diff_620.txt
|
|
|
|
./tools/testfiles/h5diff_621.txt
|
|
|
|
./tools/testfiles/h5diff_622.txt
|
|
|
|
./tools/testfiles/h5diff_623.txt
|
|
|
|
./tools/testfiles/h5diff_624.txt
|
|
|
|
./tools/testfiles/h5diff_625.txt
|
|
|
|
./tools/testfiles/h5diff_626.txt
|
|
|
|
./tools/testfiles/h5diff_627.txt
|
|
|
|
./tools/testfiles/h5diff_628.txt
|
|
|
|
./tools/testfiles/h5diff_629.txt
|
2003-12-03 07:23:15 +08:00
|
|
|
./tools/testfiles/h5diff_70.txt
|
|
|
|
./tools/testfiles/h5diff_80.txt
|
2004-05-27 22:07:49 +08:00
|
|
|
./tools/testfiles/h5diff_81.txt
|
2003-04-03 02:39:23 +08:00
|
|
|
|
2004-03-03 02:12:25 +08:00
|
|
|
#test files for h5repack
|
2004-04-08 09:44:14 +08:00
|
|
|
./tools/testfiles/test1.h5
|
|
|
|
./tools/testfiles/test3.h5
|
2004-03-03 02:12:25 +08:00
|
|
|
./tools/testfiles/test4.h5
|
|
|
|
./tools/testfiles/h5repack_info.txt
|
2003-04-29 07:51:14 +08:00
|
|
|
|
2001-07-06 00:36:40 +08:00
|
|
|
./windows/all.zip
|
|
|
|
./windows/all_withf90.zip
|