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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group . *
* Copyright by the Board of Trustees of the University of Illinois . *
* All rights reserved . *
* *
* This file is part of HDF5 . The full HDF5 copyright notice , including *
* terms governing use , modification , and redistribution , is contained in *
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* the COPYING file , which can be found at the root of the source code *
* distribution tree , or in https : //support.hdfgroup.org/ftp/HDF5/releases. *
* If you do not have access to either file , you may request a copy from *
* help @ hdfgroup . org . *
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* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/***********************************************************
*
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* Test program : tcoords
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*
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* Test the element coordinates for dataspace selection . For
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* chunked dataset , when the hyperslab selection of some
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* dimensions is full , the library optimize it by " flattenning "
* the fully selected dimensions . This program tests if the
* coordinates of selected elements are correctly calculated .
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*
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
# include "testhdf5.h"
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# define FILENAME "coord.h5"
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# define SINGLE_END_DSET "single_end_dset"
# define MULTI_ENDS_SEL_HYPER_DSET "multiple_ends_dset"
# define NAME_LEN 128
/* Data written to the dataset for single block test. Global variable
* for convenience . */
int da_buffer [ 2 ] [ 3 ] [ 6 ] [ 2 ] ;
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/***********************************************************
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* *
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* * test_singleEnd_selElements ( ) : Test element selection of only
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* * one block .
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* *
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* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
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static void test_singleEnd_selElements ( hid_t file , hbool_t is_chunked )
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{
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hid_t sid , plid , did , msid ;
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char dset_name [ NAME_LEN ] ; /* Dataset name */
size_t elmts_numb ;
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herr_t ret ; /* Generic error return */
int i , j , k ;
hsize_t da_dims [ 4 ] = { 2 , 3 , 6 , 2 } ;
hsize_t da_chunksize [ 4 ] = { 1 , 3 , 3 , 2 } ;
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/* For testing the full selection in the fastest-growing end */
int mem1_buffer [ 1 ] [ 1 ] [ 6 ] [ 2 ] ;
hsize_t mem1_dims [ 4 ] = { 1 , 1 , 6 , 2 } ;
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hsize_t da_elmts1 [ 12 ] [ 4 ] = { { 0 , 0 , 0 , 0 } ,
{ 0 , 0 , 0 , 1 } ,
{ 0 , 0 , 1 , 0 } ,
{ 0 , 0 , 1 , 1 } ,
{ 0 , 0 , 2 , 0 } ,
{ 0 , 0 , 2 , 1 } ,
{ 0 , 0 , 3 , 0 } ,
{ 0 , 0 , 3 , 1 } ,
{ 0 , 0 , 4 , 0 } ,
{ 0 , 0 , 4 , 1 } ,
{ 0 , 0 , 5 , 0 } ,
{ 0 , 0 , 5 , 1 } } ;
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/* For testing the full selection in the slowest-growing end */
int mem2_buffer [ 2 ] [ 3 ] [ 1 ] [ 1 ] ;
hsize_t mem2_dims [ 4 ] = { 2 , 3 , 1 , 1 } ;
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hsize_t da_elmts2 [ 6 ] [ 4 ] = { { 0 , 0 , 0 , 0 } ,
{ 0 , 1 , 0 , 0 } ,
{ 0 , 2 , 0 , 0 } ,
{ 1 , 0 , 0 , 0 } ,
{ 1 , 1 , 0 , 0 } ,
{ 1 , 2 , 0 , 0 } } ;
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/* For testing the full selection in the middle dimensions */
int mem3_buffer [ 1 ] [ 3 ] [ 6 ] [ 1 ] ;
hsize_t mem3_dims [ 4 ] = { 1 , 3 , 6 , 1 } ;
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hsize_t da_elmts3 [ 18 ] [ 4 ] = { { 0 , 0 , 0 , 0 } ,
{ 0 , 0 , 1 , 0 } ,
{ 0 , 0 , 2 , 0 } ,
{ 0 , 0 , 3 , 0 } ,
{ 0 , 0 , 4 , 0 } ,
{ 0 , 0 , 5 , 0 } ,
{ 0 , 1 , 0 , 0 } ,
{ 0 , 1 , 1 , 0 } ,
{ 0 , 1 , 2 , 0 } ,
{ 0 , 1 , 3 , 0 } ,
{ 0 , 1 , 4 , 0 } ,
{ 0 , 1 , 5 , 0 } ,
{ 0 , 2 , 0 , 0 } ,
{ 0 , 2 , 1 , 0 } ,
{ 0 , 2 , 2 , 0 } ,
{ 0 , 2 , 3 , 0 } ,
{ 0 , 2 , 4 , 0 } ,
{ 0 , 2 , 5 , 0 } } ;
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/* Create and write the dataset */
sid = H5Screate_simple ( 4 , da_dims , da_dims ) ;
CHECK ( sid , FAIL , " H5Screate_simple " ) ;
plid = H5Pcreate ( H5P_DATASET_CREATE ) ;
CHECK ( plid , FAIL , " H5Pcreate " ) ;
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if ( is_chunked ) {
ret = H5Pset_chunk ( plid , 4 , da_chunksize ) ;
CHECK ( ret , FAIL , " H5Pset_chunk " ) ;
}
/* Construct dataset's name */
memset ( dset_name , 0 , ( size_t ) NAME_LEN ) ;
strcat ( dset_name , SINGLE_END_DSET ) ;
if ( is_chunked )
strcat ( dset_name , " _chunked " ) ;
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did = H5Dcreate2 ( file , dset_name , H5T_NATIVE_INT , sid , H5P_DEFAULT , plid , H5P_DEFAULT ) ;
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CHECK ( did , FAIL , " H5Dcreate2 " ) ;
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/* Initialize the data to be written to file */
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for ( i = 0 ; i < 2 ; i + + ) {
for ( j = 0 ; j < 3 ; j + + ) {
for ( k = 0 ; k < 6 ; k + + ) {
da_buffer [ i ] [ j ] [ k ] [ 0 ] = i * 100 + j * 10 + k ;
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da_buffer [ i ] [ j ] [ k ] [ 1 ] = i * 100 + j * 10 + k + 1 ;
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}
}
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}
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ret = H5Dwrite ( did , H5T_NATIVE_INT , sid , sid , H5P_DEFAULT , da_buffer ) ;
CHECK ( ret , FAIL , " H5Dwrite " ) ;
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ret = H5Dclose ( did ) ;
CHECK ( ret , FAIL , " H5Dclose " ) ;
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/* ****** Case 1: ******
* Testing the full selection in the fastest - growing end */
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did = H5Dopen2 ( file , dset_name , H5P_DEFAULT ) ;
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CHECK ( did , FAIL , " H5Dopen2 " ) ;
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/* Select the elements in the dataset */
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elmts_numb = 12 ;
ret = H5Sselect_elements ( sid , H5S_SELECT_SET , elmts_numb , ( const hsize_t * ) da_elmts1 ) ;
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CHECK ( ret , FAIL , " H5Sselect_elements " ) ;
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/* Dataspace for memory buffer */
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msid = H5Screate_simple ( 4 , mem1_dims , mem1_dims ) ;
CHECK ( msid , FAIL , " H5Screate_simple " ) ;
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ret = H5Sselect_all ( msid ) ;
CHECK ( ret , FAIL , " H5Sselect_all " ) ;
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ret = H5Dread ( did , H5T_NATIVE_INT , msid , sid , H5P_DEFAULT , mem1_buffer ) ;
CHECK ( ret , FAIL , " H5Dread " ) ;
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ret = H5Dclose ( did ) ;
CHECK ( ret , FAIL , " H5Dclose " ) ;
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ret = H5Sclose ( msid ) ;
CHECK ( ret , FAIL , " H5Sclose " ) ;
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for ( i = 0 ; i < 6 ; i + + )
for ( j = 0 ; j < 2 ; j + + )
if ( da_buffer [ 0 ] [ 0 ] [ i ] [ j ] ! = mem1_buffer [ 0 ] [ 0 ] [ i ] [ j ] ) {
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TestErrPrintf ( " %u: Read different values than written at index 0,0,%d,%d \n " , __LINE__ , i , j ) ;
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}
/* ****** Case 2: ******
* Testing the full selection in the slowest - growing end */
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did = H5Dopen2 ( file , dset_name , H5P_DEFAULT ) ;
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CHECK ( did , FAIL , " H5Dopen2 " ) ;
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/* Select the elements in the dataset */
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elmts_numb = 6 ;
ret = H5Sselect_elements ( sid , H5S_SELECT_SET , elmts_numb , ( const hsize_t * ) da_elmts2 ) ;
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CHECK ( ret , FAIL , " H5Sselect_elements " ) ;
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/* Dataspace for memory buffer */
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msid = H5Screate_simple ( 4 , mem2_dims , mem2_dims ) ;
CHECK ( msid , FAIL , " H5Screate_simple " ) ;
ret = H5Sselect_all ( msid ) ;
CHECK ( ret , FAIL , " H5Sselect_all " ) ;
ret = H5Dread ( did , H5T_NATIVE_INT , msid , sid , H5P_DEFAULT , mem2_buffer ) ;
CHECK ( ret , FAIL , " H5Dread " ) ;
ret = H5Dclose ( did ) ;
CHECK ( ret , FAIL , " H5Dclose " ) ;
ret = H5Sclose ( msid ) ;
CHECK ( ret , FAIL , " H5Sclose " ) ;
for ( i = 0 ; i < 2 ; i + + )
for ( j = 0 ; j < 3 ; j + + )
if ( da_buffer [ i ] [ j ] [ 0 ] [ 0 ] ! = mem2_buffer [ i ] [ j ] [ 0 ] [ 0 ] ) {
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TestErrPrintf ( " %u: Read different values than written at index %d,%d,0,0, da_buffer = %d, mem2_buffer = %d \n " , __LINE__ , i , j , da_buffer [ i ] [ j ] [ 0 ] [ 0 ] , mem2_buffer [ i ] [ j ] [ 0 ] [ 0 ] ) ;
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}
/* ****** Case 3: ******
* Testing the full selection in the middle dimensions */
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did = H5Dopen2 ( file , dset_name , H5P_DEFAULT ) ;
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CHECK ( did , FAIL , " H5Dopen2 " ) ;
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/* Select the elements in the dataset */
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elmts_numb = 18 ;
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ret = H5Sselect_elements ( sid , H5S_SELECT_SET , elmts_numb , ( const hsize_t * ) da_elmts3 ) ;
CHECK ( ret , FAIL , " H5Sselect_elements " ) ;
/* Dataspace for memory buffer */
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msid = H5Screate_simple ( 4 , mem3_dims , mem3_dims ) ;
CHECK ( msid , FAIL , " H5Screate_simple " ) ;
ret = H5Sselect_all ( msid ) ;
CHECK ( ret , FAIL , " H5Sselect_all " ) ;
ret = H5Dread ( did , H5T_NATIVE_INT , msid , sid , H5P_DEFAULT , mem3_buffer ) ;
CHECK ( ret , FAIL , " H5Dread " ) ;
ret = H5Dclose ( did ) ;
CHECK ( ret , FAIL , " H5Dclose " ) ;
ret = H5Sclose ( msid ) ;
CHECK ( ret , FAIL , " H5Sclose " ) ;
for ( i = 0 ; i < 3 ; i + + )
for ( j = 0 ; j < 6 ; j + + )
if ( da_buffer [ 0 ] [ i ] [ j ] [ 0 ] ! = mem3_buffer [ 0 ] [ i ] [ j ] [ 0 ] ) {
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TestErrPrintf ( " %u: Read different values than written at index 0,%d,%d,0 \n " , __LINE__ , i , j ) ;
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}
ret = H5Sclose ( sid ) ;
CHECK ( ret , FAIL , " H5Sclose " ) ;
ret = H5Pclose ( plid ) ;
CHECK ( ret , FAIL , " H5Pclose " ) ;
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}
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/***********************************************************
* *
* * test_singleEnd_selHyperslab ( ) : Test full hyperslab selection
* * of only one block .
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* *
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* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
static void test_singleEnd_selHyperslab ( hid_t file , hbool_t is_chunked )
{
hid_t sid , did , msid ;
char dset_name [ NAME_LEN ] ; /* Dataset name */
herr_t ret ; /* Generic error return */
int i , j ;
hsize_t da_dims [ 4 ] = { 2 , 3 , 6 , 2 } ;
/* For testing the full selection in the fastest-growing end */
int mem1_buffer [ 1 ] [ 1 ] [ 6 ] [ 2 ] ;
hsize_t mem1_dims [ 4 ] = { 1 , 1 , 6 , 2 } ;
hsize_t mem1_start [ 4 ] = { 0 , 0 , 0 , 0 } ;
hsize_t mem1_count [ 4 ] = { 1 , 1 , 1 , 1 } ;
hsize_t mem1_stride [ 4 ] = { 1 , 1 , 1 , 1 } ;
hsize_t mem1_block [ 4 ] = { 1 , 1 , 6 , 2 } ;
/* For testing the full selection in the slowest-growing end */
int mem2_buffer [ 2 ] [ 3 ] [ 1 ] [ 1 ] ;
hsize_t mem2_dims [ 4 ] = { 2 , 3 , 1 , 1 } ;
hsize_t mem2_start [ 4 ] = { 0 , 0 , 0 , 0 } ;
hsize_t mem2_count [ 4 ] = { 1 , 1 , 1 , 1 } ;
hsize_t mem2_stride [ 4 ] = { 1 , 1 , 1 , 1 } ;
hsize_t mem2_block [ 4 ] = { 2 , 3 , 1 , 1 } ;
/* For testing the full selection in the middle dimensions */
int mem3_buffer [ 1 ] [ 3 ] [ 6 ] [ 1 ] ;
hsize_t mem3_dims [ 4 ] = { 1 , 3 , 6 , 1 } ;
hsize_t mem3_start [ 4 ] = { 0 , 0 , 0 , 0 } ;
hsize_t mem3_count [ 4 ] = { 1 , 1 , 1 , 1 } ;
hsize_t mem3_stride [ 4 ] = { 1 , 1 , 1 , 1 } ;
hsize_t mem3_block [ 4 ] = { 1 , 3 , 6 , 1 } ;
/* Construct dataset's name */
memset ( dset_name , 0 , NAME_LEN ) ;
strcat ( dset_name , SINGLE_END_DSET ) ;
if ( is_chunked )
strcat ( dset_name , " _chunked " ) ;
/* Dataspace for the dataset in file */
sid = H5Screate_simple ( 4 , da_dims , da_dims ) ;
CHECK ( sid , FAIL , " H5Screate_simple " ) ;
/* ****** Case 1: ******
* Testing the full selection in the fastest - growing end */
did = H5Dopen2 ( file , dset_name , H5P_DEFAULT ) ;
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CHECK ( did , FAIL , " H5Dopen2 " ) ;
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/* Select the elements in the dataset */
ret = H5Sselect_hyperslab ( sid , H5S_SELECT_SET , mem1_start , mem1_stride , mem1_count , mem1_block ) ;
CHECK ( ret , FAIL , " H5Sselect_hyperslab " ) ;
/* Dataspace for memory buffer */
msid = H5Screate_simple ( 4 , mem1_dims , mem1_dims ) ;
CHECK ( msid , FAIL , " H5Screate_simple " ) ;
ret = H5Sselect_all ( msid ) ;
CHECK ( ret , FAIL , " H5Sselect_all " ) ;
ret = H5Dread ( did , H5T_NATIVE_INT , msid , sid , H5P_DEFAULT , mem1_buffer ) ;
CHECK ( ret , FAIL , " H5Dread " ) ;
ret = H5Dclose ( did ) ;
CHECK ( ret , FAIL , " H5Dclose " ) ;
ret = H5Sclose ( msid ) ;
CHECK ( ret , FAIL , " H5Sclose " ) ;
for ( i = 0 ; i < 6 ; i + + )
for ( j = 0 ; j < 2 ; j + + )
if ( da_buffer [ 0 ] [ 0 ] [ i ] [ j ] ! = mem1_buffer [ 0 ] [ 0 ] [ i ] [ j ] ) {
TestErrPrintf ( " %u: Read different values than written at index 0,0,%d,%d \n " , __LINE__ , i , j ) ;
}
/* ****** Case 2: ******
* Testing the full selection in the slowest - growing end */
did = H5Dopen2 ( file , dset_name , H5P_DEFAULT ) ;
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CHECK ( did , FAIL , " H5Dopen2 " ) ;
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/* Select the elements in the dataset */
ret = H5Sselect_hyperslab ( sid , H5S_SELECT_SET , mem2_start , mem2_stride , mem2_count , mem2_block ) ;
CHECK ( ret , FAIL , " H5Sselect_hyperslab " ) ;
/* Dataspace for memory buffer */
msid = H5Screate_simple ( 4 , mem2_dims , mem2_dims ) ;
CHECK ( msid , FAIL , " H5Screate_simple " ) ;
ret = H5Sselect_all ( msid ) ;
CHECK ( ret , FAIL , " H5Sselect_all " ) ;
ret = H5Dread ( did , H5T_NATIVE_INT , msid , sid , H5P_DEFAULT , mem2_buffer ) ;
CHECK ( ret , FAIL , " H5Dread " ) ;
ret = H5Dclose ( did ) ;
CHECK ( ret , FAIL , " H5Dclose " ) ;
ret = H5Sclose ( msid ) ;
CHECK ( ret , FAIL , " H5Sclose " ) ;
for ( i = 0 ; i < 2 ; i + + )
for ( j = 0 ; j < 3 ; j + + )
if ( da_buffer [ i ] [ j ] [ 0 ] [ 0 ] ! = mem2_buffer [ i ] [ j ] [ 0 ] [ 0 ] ) {
TestErrPrintf ( " %u: Read different values than written at index %d,%d,0,0 \n " , __LINE__ , i , j ) ;
}
/* ****** Case 3: ******
* Testing the full selection in the middle dimensions */
did = H5Dopen2 ( file , dset_name , H5P_DEFAULT ) ;
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CHECK ( did , FAIL , " H5Dopen2 " ) ;
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/* Select the elements in the dataset */
ret = H5Sselect_hyperslab ( sid , H5S_SELECT_SET , mem3_start , mem3_stride , mem3_count , mem3_block ) ;
CHECK ( ret , FAIL , " H5Sselect_hyperslab " ) ;
/* Dataspace for memory buffer */
msid = H5Screate_simple ( 4 , mem3_dims , mem3_dims ) ;
CHECK ( msid , FAIL , " H5Screate_simple " ) ;
ret = H5Sselect_all ( msid ) ;
CHECK ( ret , FAIL , " H5Sselect_all " ) ;
ret = H5Dread ( did , H5T_NATIVE_INT , msid , sid , H5P_DEFAULT , mem3_buffer ) ;
CHECK ( ret , FAIL , " H5Dread " ) ;
ret = H5Dclose ( did ) ;
CHECK ( ret , FAIL , " H5Dclose " ) ;
ret = H5Sclose ( msid ) ;
CHECK ( ret , FAIL , " H5Sclose " ) ;
for ( i = 0 ; i < 3 ; i + + )
for ( j = 0 ; j < 6 ; j + + )
if ( da_buffer [ 0 ] [ i ] [ j ] [ 0 ] ! = mem3_buffer [ 0 ] [ i ] [ j ] [ 0 ] ) {
TestErrPrintf ( " %u: Read different values than written at index 0,%d,%d,0 \n " , __LINE__ , i , j ) ;
}
ret = H5Sclose ( sid ) ;
CHECK ( ret , FAIL , " H5Sclose " ) ;
}
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/***********************************************************
* *
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* * test_multiple_end ( ) : Test full hyperslab selection of
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* * multiple blocks .
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* *
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* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
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static void test_multiple_ends ( hid_t file , hbool_t is_chunked )
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{
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hid_t sid , plid , did , msid ;
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char dset_name [ NAME_LEN ] ; /* Dataset name */
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herr_t ret ; /* Generic error return */
int i , j , k , l , m , n , p ;
hsize_t da_dims [ 8 ] = { 4 , 5 , 3 , 4 , 2 , 3 , 6 , 2 } ;
hsize_t da_chunksize [ 8 ] = { 1 , 5 , 3 , 2 , 2 , 3 , 3 , 2 } ;
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int data_buf [ 4 ] [ 5 ] [ 3 ] [ 4 ] [ 2 ] [ 3 ] [ 6 ] [ 2 ] ;
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/* For testing the full selections in the fastest-growing end and in the middle dimensions */
int mem1_buffer [ 1 ] [ 1 ] [ 1 ] [ 4 ] [ 2 ] [ 1 ] [ 6 ] [ 2 ] ;
hsize_t mem1_dims [ 8 ] = { 1 , 1 , 1 , 4 , 2 , 1 , 6 , 2 } ;
hsize_t mem1_start [ 8 ] = { 0 , 0 , 0 , 0 , 0 , 0 , 0 , 0 } ;
hsize_t mem1_count [ 8 ] = { 1 , 1 , 1 , 1 , 1 , 1 , 1 , 1 } ;
hsize_t mem1_stride [ 8 ] = { 1 , 1 , 1 , 1 , 1 , 1 , 1 , 1 } ;
hsize_t mem1_block [ 8 ] = { 1 , 1 , 1 , 4 , 2 , 1 , 6 , 2 } ;
/* For testing the full selections in the slowest-growing end and in the middle dimensions */
int mem2_buffer [ 4 ] [ 5 ] [ 1 ] [ 4 ] [ 2 ] [ 1 ] [ 1 ] [ 1 ] ;
hsize_t mem2_dims [ 8 ] = { 4 , 5 , 1 , 4 , 2 , 1 , 1 , 1 } ;
hsize_t mem2_start [ 8 ] = { 0 , 0 , 0 , 0 , 0 , 0 , 0 , 0 } ;
hsize_t mem2_count [ 8 ] = { 1 , 1 , 1 , 1 , 1 , 1 , 1 , 1 } ;
hsize_t mem2_stride [ 8 ] = { 1 , 1 , 1 , 1 , 1 , 1 , 1 , 1 } ;
hsize_t mem2_block [ 8 ] = { 4 , 5 , 1 , 4 , 2 , 1 , 1 , 1 } ;
/* For testing two unadjacent full selections in the middle dimensions */
int mem3_buffer [ 1 ] [ 5 ] [ 3 ] [ 1 ] [ 1 ] [ 3 ] [ 6 ] [ 1 ] ;
hsize_t mem3_dims [ 8 ] = { 1 , 5 , 3 , 1 , 1 , 3 , 6 , 1 } ;
hsize_t mem3_start [ 8 ] = { 0 , 0 , 0 , 0 , 0 , 0 , 0 , 0 } ;
hsize_t mem3_count [ 8 ] = { 1 , 1 , 1 , 1 , 1 , 1 , 1 , 1 } ;
hsize_t mem3_stride [ 8 ] = { 1 , 1 , 1 , 1 , 1 , 1 , 1 , 1 } ;
hsize_t mem3_block [ 8 ] = { 1 , 5 , 3 , 1 , 1 , 3 , 6 , 1 } ;
/* For testing the full selections in the fastest-growing end and the slowest-growing end */
int mem4_buffer [ 4 ] [ 5 ] [ 1 ] [ 1 ] [ 1 ] [ 1 ] [ 6 ] [ 2 ] ;
hsize_t mem4_dims [ 8 ] = { 4 , 5 , 1 , 1 , 1 , 1 , 6 , 2 } ;
hsize_t mem4_start [ 8 ] = { 0 , 0 , 0 , 0 , 0 , 0 , 0 , 0 } ;
hsize_t mem4_count [ 8 ] = { 1 , 1 , 1 , 1 , 1 , 1 , 1 , 1 } ;
hsize_t mem4_stride [ 8 ] = { 1 , 1 , 1 , 1 , 1 , 1 , 1 , 1 } ;
hsize_t mem4_block [ 8 ] = { 4 , 5 , 1 , 1 , 1 , 1 , 6 , 2 } ;
/* For testing the full selections in the fastest-growing end and slowest-growing end,
* also in the middle dimensions */
int mem5_buffer [ 4 ] [ 5 ] [ 1 ] [ 4 ] [ 2 ] [ 1 ] [ 6 ] [ 2 ] ;
hsize_t mem5_dims [ 8 ] = { 4 , 5 , 1 , 4 , 2 , 1 , 6 , 2 } ;
hsize_t mem5_start [ 8 ] = { 0 , 0 , 0 , 0 , 0 , 0 , 0 , 0 } ;
hsize_t mem5_count [ 8 ] = { 1 , 1 , 1 , 1 , 1 , 1 , 1 , 1 } ;
hsize_t mem5_stride [ 8 ] = { 1 , 1 , 1 , 1 , 1 , 1 , 1 , 1 } ;
hsize_t mem5_block [ 8 ] = { 4 , 5 , 1 , 4 , 2 , 1 , 6 , 2 } ;
/* Create and write the dataset */
sid = H5Screate_simple ( 8 , da_dims , da_dims ) ;
CHECK ( sid , FAIL , " H5Screate_simple " ) ;
plid = H5Pcreate ( H5P_DATASET_CREATE ) ;
CHECK ( plid , FAIL , " H5Pcreate " ) ;
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if ( is_chunked ) {
ret = H5Pset_chunk ( plid , 8 , da_chunksize ) ;
CHECK ( ret , FAIL , " H5Pset_chunk " ) ;
}
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/* Construct dataset's name */
memset ( dset_name , 0 , NAME_LEN ) ;
strcat ( dset_name , MULTI_ENDS_SEL_HYPER_DSET ) ;
if ( is_chunked )
strcat ( dset_name , " _chunked " ) ;
did = H5Dcreate2 ( file , dset_name , H5T_NATIVE_INT , sid , H5P_DEFAULT , plid , H5P_DEFAULT ) ;
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CHECK ( did , FAIL , " H5Dcreate2 " ) ;
for ( i = 0 ; i < 4 ; i + + )
for ( j = 0 ; j < 5 ; j + + )
for ( k = 0 ; k < 3 ; k + + )
for ( l = 0 ; l < 4 ; l + + )
for ( m = 0 ; m < 2 ; m + + )
for ( n = 0 ; n < 3 ; n + + )
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for ( p = 0 ; p < 6 ; p + + ) {
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data_buf [ i ] [ j ] [ k ] [ l ] [ m ] [ n ] [ p ] [ 0 ] = i * 1000000 + j * 100000 + k * 10000 + l * 1000 + m * 100 + n * 10 + p ;
data_buf [ i ] [ j ] [ k ] [ l ] [ m ] [ n ] [ p ] [ 1 ] = i * 1000000 + j * 100000 + k * 10000 + l * 1000 + m * 100 + n * 10 + p + 1 ;
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}
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ret = H5Dwrite ( did , H5T_NATIVE_INT , sid , sid , H5P_DEFAULT , data_buf ) ;
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CHECK ( ret , FAIL , " H5Dwrite " ) ;
ret = H5Dclose ( did ) ;
CHECK ( ret , FAIL , " H5Dclose " ) ;
/* ****** Case 1: ******
* Testing the full selections in the fastest - growing end and in the middle dimensions */
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did = H5Dopen2 ( file , dset_name , H5P_DEFAULT ) ;
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CHECK ( did , FAIL , " H5Dopen2 " ) ;
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/* Select the elements in the dataset */
ret = H5Sselect_hyperslab ( sid , H5S_SELECT_SET , mem1_start , mem1_stride , mem1_count , mem1_block ) ;
CHECK ( ret , FAIL , " H5Sselect_hyperslab " ) ;
msid = H5Screate_simple ( 8 , mem1_dims , mem1_dims ) ;
CHECK ( msid , FAIL , " H5Screate_simple " ) ;
ret = H5Sselect_all ( msid ) ;
CHECK ( ret , FAIL , " H5Sselect_all " ) ;
ret = H5Dread ( did , H5T_NATIVE_INT , msid , sid , H5P_DEFAULT , mem1_buffer ) ;
CHECK ( ret , FAIL , " H5Dread " ) ;
ret = H5Dclose ( did ) ;
CHECK ( ret , FAIL , " H5Dclose " ) ;
ret = H5Sclose ( msid ) ;
CHECK ( ret , FAIL , " H5Sclose " ) ;
for ( i = 0 ; i < 4 ; i + + )
for ( j = 0 ; j < 2 ; j + + )
for ( k = 0 ; k < 6 ; k + + )
for ( l = 0 ; l < 2 ; l + + )
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if ( data_buf [ 0 ] [ 0 ] [ 0 ] [ i ] [ j ] [ 0 ] [ k ] [ l ] ! = mem1_buffer [ 0 ] [ 0 ] [ 0 ] [ i ] [ j ] [ 0 ] [ k ] [ l ] ) {
TestErrPrintf ( " %u: Read different values than written at index 0,0,0,%d,%d,0,%d,%d \n " , __LINE__ , i , j , k , l ) ;
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}
/* ****** Case 2: ******
* Testing the full selections in the slowest - growing end and in the middle dimensions */
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did = H5Dopen2 ( file , dset_name , H5P_DEFAULT ) ;
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CHECK ( did , FAIL , " H5Dopen2 " ) ;
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/* Select the elements in the dataset */
ret = H5Sselect_hyperslab ( sid , H5S_SELECT_SET , mem2_start , mem2_stride , mem2_count , mem2_block ) ;
CHECK ( ret , FAIL , " H5Sselect_hyperslab " ) ;
msid = H5Screate_simple ( 8 , mem2_dims , mem2_dims ) ;
CHECK ( msid , FAIL , " H5Screate_simple " ) ;
ret = H5Sselect_all ( msid ) ;
CHECK ( ret , FAIL , " H5Sselect_all " ) ;
ret = H5Dread ( did , H5T_NATIVE_INT , msid , sid , H5P_DEFAULT , mem2_buffer ) ;
CHECK ( ret , FAIL , " H5Dread " ) ;
ret = H5Dclose ( did ) ;
CHECK ( ret , FAIL , " H5Dclose " ) ;
ret = H5Sclose ( msid ) ;
CHECK ( ret , FAIL , " H5Sclose " ) ;
for ( i = 0 ; i < 4 ; i + + )
for ( j = 0 ; j < 5 ; j + + )
for ( k = 0 ; k < 4 ; k + + )
for ( l = 0 ; l < 2 ; l + + )
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if ( data_buf [ i ] [ j ] [ 0 ] [ k ] [ l ] [ 0 ] [ 0 ] [ 0 ] ! = mem2_buffer [ i ] [ j ] [ 0 ] [ k ] [ l ] [ 0 ] [ 0 ] [ 0 ] ) {
TestErrPrintf ( " %u: Read different values than written at index %d,%d,0,%d,%d,0,0,0 \n " , __LINE__ , i , j , k , l ) ;
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}
/* ****** Case 3: ******
* Testing two unadjacent full selections in the middle dimensions */
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did = H5Dopen2 ( file , dset_name , H5P_DEFAULT ) ;
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CHECK ( did , FAIL , " H5Dopen2 " ) ;
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/* Select the elements in the dataset */
ret = H5Sselect_hyperslab ( sid , H5S_SELECT_SET , mem3_start , mem3_stride , mem3_count , mem3_block ) ;
CHECK ( ret , FAIL , " H5Sselect_hyperslab " ) ;
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msid = H5Screate_simple ( 8 , mem3_dims , mem3_dims ) ;
CHECK ( msid , FAIL , " H5Screate_simple " ) ;
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ret = H5Sselect_all ( msid ) ;
CHECK ( ret , FAIL , " H5Sselect_all " ) ;
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ret = H5Dread ( did , H5T_NATIVE_INT , msid , sid , H5P_DEFAULT , mem3_buffer ) ;
CHECK ( ret , FAIL , " H5Dread " ) ;
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ret = H5Dclose ( did ) ;
CHECK ( ret , FAIL , " H5Dclose " ) ;
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ret = H5Sclose ( msid ) ;
CHECK ( ret , FAIL , " H5Sclose " ) ;
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for ( i = 0 ; i < 5 ; i + + )
for ( j = 0 ; j < 3 ; j + + )
for ( k = 0 ; k < 3 ; k + + )
for ( l = 0 ; l < 6 ; l + + )
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if ( data_buf [ 0 ] [ i ] [ j ] [ 0 ] [ 0 ] [ k ] [ l ] [ 0 ] ! = mem3_buffer [ 0 ] [ i ] [ j ] [ 0 ] [ 0 ] [ k ] [ l ] [ 0 ] ) {
TestErrPrintf ( " %u: Read different values than written at index 0,%d,%d,0,0,%d,%d,0 \n " , __LINE__ , i , j , k , l ) ;
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}
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/* ****** Case 4: ******
* Testing the full selections in the fastest - growing end and the slowest - growing end */
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did = H5Dopen2 ( file , dset_name , H5P_DEFAULT ) ;
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CHECK ( did , FAIL , " H5Dopen2 " ) ;
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/* Select the elements in the dataset */
ret = H5Sselect_hyperslab ( sid , H5S_SELECT_SET , mem4_start , mem4_stride , mem4_count , mem4_block ) ;
CHECK ( ret , FAIL , " H5Sselect_hyperslab " ) ;
msid = H5Screate_simple ( 8 , mem4_dims , mem4_dims ) ;
CHECK ( msid , FAIL , " H5Screate_simple " ) ;
ret = H5Sselect_all ( msid ) ;
CHECK ( ret , FAIL , " H5Sselect_all " ) ;
ret = H5Dread ( did , H5T_NATIVE_INT , msid , sid , H5P_DEFAULT , mem4_buffer ) ;
CHECK ( ret , FAIL , " H5Dread " ) ;
ret = H5Dclose ( did ) ;
CHECK ( ret , FAIL , " H5Dclose " ) ;
ret = H5Sclose ( msid ) ;
CHECK ( ret , FAIL , " H5Sclose " ) ;
for ( i = 0 ; i < 4 ; i + + )
for ( j = 0 ; j < 5 ; j + + )
for ( k = 0 ; k < 6 ; k + + )
for ( l = 0 ; l < 2 ; l + + )
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if ( data_buf [ i ] [ j ] [ 0 ] [ 0 ] [ 0 ] [ 0 ] [ k ] [ l ] ! = mem4_buffer [ i ] [ j ] [ 0 ] [ 0 ] [ 0 ] [ 0 ] [ k ] [ l ] ) {
TestErrPrintf ( " %u: Read different values than written at index %d,%d,0,0,0,0,%d,%d \n " , __LINE__ , i , j , k , l ) ;
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}
/* ****** Case 5: ******
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* Testing the full selections in the fastest - growing end and the slowest - growing end ,
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* and also in the middle dimensions */
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did = H5Dopen2 ( file , dset_name , H5P_DEFAULT ) ;
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CHECK ( did , FAIL , " H5Dopen2 " ) ;
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/* Select the elements in the dataset */
ret = H5Sselect_hyperslab ( sid , H5S_SELECT_SET , mem5_start , mem5_stride , mem5_count , mem5_block ) ;
CHECK ( ret , FAIL , " H5Sselect_hyperslab " ) ;
msid = H5Screate_simple ( 8 , mem5_dims , mem5_dims ) ;
CHECK ( msid , FAIL , " H5Screate_simple " ) ;
ret = H5Sselect_all ( msid ) ;
CHECK ( ret , FAIL , " H5Sselect_all " ) ;
ret = H5Dread ( did , H5T_NATIVE_INT , msid , sid , H5P_DEFAULT , mem5_buffer ) ;
CHECK ( ret , FAIL , " H5Dread " ) ;
ret = H5Dclose ( did ) ;
CHECK ( ret , FAIL , " H5Dclose " ) ;
ret = H5Sclose ( msid ) ;
CHECK ( ret , FAIL , " H5Sclose " ) ;
for ( i = 0 ; i < 4 ; i + + )
for ( j = 0 ; j < 5 ; j + + )
for ( k = 0 ; k < 4 ; k + + )
for ( l = 0 ; l < 2 ; l + + )
for ( m = 0 ; m < 6 ; m + + )
for ( n = 0 ; n < 2 ; n + + )
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if ( data_buf [ i ] [ j ] [ 0 ] [ k ] [ l ] [ 0 ] [ m ] [ n ] ! = mem5_buffer [ i ] [ j ] [ 0 ] [ k ] [ l ] [ 0 ] [ m ] [ n ] ) {
TestErrPrintf ( " %u: Read different values than written at index %d,%d,0,%d,%d,0,%d,%d \n " , __LINE__ , i , j , k , l , m , n ) ;
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}
ret = H5Sclose ( sid ) ;
CHECK ( ret , FAIL , " H5Sclose " ) ;
ret = H5Pclose ( plid ) ;
CHECK ( ret , FAIL , " H5Pclose " ) ;
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}
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/****************************************************************
* *
* * test_coords ( ) : Main testing routine .
* *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
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void test_coords ( void )
{
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hid_t fid ;
int i ;
hbool_t is_chunk ;
herr_t ret ; /* Generic error return */
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fid = H5Fcreate ( FILENAME , H5F_ACC_TRUNC , H5P_DEFAULT , H5P_DEFAULT ) ;
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CHECK ( fid , FAIL , " H5Fcreate " ) ;
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for ( i = 0 , is_chunk = FALSE ; i < 2 ; i + + , is_chunk + + ) {
/* Test H5Sselect_elements with selection of one block of data */
test_singleEnd_selElements ( fid , is_chunk ) ;
/* Test H5Sselect_hyperslab with selection of one block of data */
test_singleEnd_selHyperslab ( fid , is_chunk ) ;
/* Test H5Sselect_hyperslab with selection of multiple blocks of data */
test_multiple_ends ( fid , is_chunk ) ;
}
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ret = H5Fclose ( fid ) ;
CHECK ( ret , FAIL , " H5Fclose " ) ;
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}
/*-------------------------------------------------------------------------
* Function : cleanup_coords
*
* Purpose : Cleanup temporary test files
*
* Return : none
*
* Programmer : Raymond Lu
* 20 Dec . 2007
*
* Modifications :
*
* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
*/
void
cleanup_coords ( void )
{
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remove ( FILENAME ) ;
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}