Commit Graph

171 Commits

Author SHA1 Message Date
Benoit Jacob
580672ea43 Add new default option EIGEN_SPLIT_LARGE_TESTS and cmake macro ei_add_test_multi.
When enabled, large tests are split into smaller executables.
This needs minimal changes in the unit tests.
Updated the LU test to use it.
2009-10-19 13:29:00 -04:00
Benoit Jacob
b78b2ede5f finally, the right fix: set CTEST_BUILD_TARGET.
So this is the come-back of btest target, and the default target is empty again.
2009-10-04 20:27:44 -04:00
Benoit Jacob
a1d9b76dd5 add debug targets like debug_qr to build a specific test with debug info
remove the btest target, instead just do "make" since anyway we have to let "make" build the tests
2009-10-03 16:50:50 -04:00
Hauke Heibel
7d2ca0e05e Added cmake project definitions. 2009-10-02 18:45:24 +02:00
Benoit Jacob
92480ffd26 * Introduce make targets btest (build tests), blas (build blas lib), demos (build demos).
* remove EIGEN_BUILD_TESTS and siblings
* add summary at the end of cmake run, hopefully not too verbose
* fix build of quaternion demo
* kill remnants of old binary library option
2009-09-27 17:48:53 -04:00
Benoit Jacob
46be9c9ac1 * fix super nasty bug: vector.maxCoeff(&index) didn't work when 'vector'
was a row-vector. Fixed by splitting the vector version from the matrix version.
* add unit test, the visitors weren't covered by any test!!
2009-09-16 14:18:30 -04:00
Gael Guennebaud
b56bb441dd add a stable_norm unit test 2009-09-07 12:46:16 +02:00
Hauke Heibel
7f5256f628 Added conservativeResize + unit test. 2009-09-03 17:27:51 +02:00
Benoit Jacob
ec20d58317 * add serious unit test for swap
* fix my stupidity in Matrix::swap()
2009-09-02 16:56:48 -04:00
Gael Guennebaud
4d91229bdc [mq]: eigensolver 2009-09-01 16:20:56 +02:00
Benoit Jacob
6e4e94ff32 * JacobiSVD:
- support complex numbers
 - big rewrite of the 2x2 kernel, much more robust
* Jacobi:
 - fix weirdness in initial design, e.g. applyJacobiOnTheRight actually did the inverse transformation
 - fully support complex numbers
 - fix logic to decide whether to vectorize
 - remove several clumsy methods

fix for complex numbers
2009-08-31 22:26:15 -04:00
Benoit Jacob
97bc1af1f1 add ColPivotingHouseholderQR
rename RRQR to fullPivotingHouseholderQR
2009-08-23 18:04:33 -04:00
Benoit Jacob
7bedf5e9cb add initial, rough, full-pivoting RRQR decomposition
lots of room for improvement!
and add Gael a (c) line in Householder.h
2009-08-22 01:13:21 -04:00
Marcus D. Hanwell
ef582933c1 Proper fix for linking to the Qt libraries (and others)
My initial fix was incorrect, the libraries must be quoted when being
passed to the add test macro, but must be unquoted when passed to the
target_link_libraries function.
2009-08-21 14:04:17 -04:00
Gael Guennebaud
3ac01b1400 compilation fix in EigenSolver,
bugfix in PartialLU
2009-08-06 16:41:54 +02:00
Gael Guennebaud
912da9fade merge with special_matrix branch 2009-08-03 16:17:32 +02:00
Benoit Jacob
d10c710b15 add new Householder module 2009-08-03 16:06:57 +02:00
Benoit Jacob
cd49780143 apply patch from Marcus Hanwell: Improved quoting of tests when added to the build 2009-08-02 15:09:34 +02:00
Gael Guennebaud
264fe82c65 add a debug mechanism to compute the number of intermediate evaluations (only for dynamic size) 2009-07-28 17:13:13 +02:00
Gael Guennebaud
f95b77be62 trmm is now fully working and available via TriangularView::operator* 2009-07-27 11:42:54 +02:00
Gael Guennebaud
f3fde74695 finalize trsm: works in all situations, and it is now used by solve() and solveInPlace() 2009-07-26 13:01:37 +02:00
Gael Guennebaud
82c5438c95 split and add unit tests for symm and syrk,
the .rank*update() functions now returns a reference to *this
2009-07-23 21:22:51 +02:00
Gael Guennebaud
587029a612 started an implementation of BandMatrix: at least the read/write access
to the main/sub/super diagonals seems to work well.
2009-07-14 23:27:37 +02:00
Gael Guennebaud
a2cf7ba955 add triangular * vector product 2009-07-13 13:17:55 +02:00
Gael Guennebaud
96e7d9f896 ok now all the complex mat-mat and mat-vec products involving conjugate,
adjoint, -, and scalar multiple seems to be well handled. It only remains
the simpler case: C = alpha*(A*B) ... for the next commit
2009-07-08 18:24:37 +02:00
Benoit Jacob
6809f7b1cd new implementation of diagonal matrices and diagonal matrix expressions 2009-06-28 21:27:37 +02:00
Hauke Heibel
db5647abae Added Umeyama implementation. 2009-05-26 19:22:25 +02:00
Gael Guennebaud
f4cf5e9b26 split and extend eigen-solver tests 2009-03-23 14:38:59 +00:00
Gael Guennebaud
0be89a4796 big addons:
* add Homogeneous expression for vector and set of vectors (aka matrix)
  => the next step will be to overload operator*
* add homogeneous normalization (again for vector and set of vectors)
* add a Replicate expression (with uni-directional replication
  facilities)
=> for all of them I'll add examples once we agree on the API
* fix gcc-4.4 warnings
* rename reverse.cpp array_reverse.cpp
2009-03-05 10:25:22 +00:00
Gael Guennebaud
40774c625e add a proof of concept autodiff jacobian helper class based on adolc
with unit test and FindAdolc cmake module
2009-02-27 16:19:13 +00:00
Gael Guennebaud
de014efdaf * split CacheFriendlyProduct into multiple smaller files
* add an efficient selfadjoint * vector implementation (= blas symv)
  perf are inbetween MKL and GOTO
  => the interface is still missing (have to be rethougth)
2009-02-21 20:20:38 +00:00
Gael Guennebaud
e6f1104b57 * fix Quaternion::setFromTwoVectors (thanks to "benv" from the forum)
* extend PartialRedux::cross() to any matrix sizes with automatic
  vectorization when possible
* unit tests: add "geo_" prefix to all unit tests related to the
  geometry module and start splitting the big "geometry.cpp" tests to
  multiple smaller ones (also include new tests)
2009-02-17 09:53:05 +00:00
Gael Guennebaud
51c991af45 * exit Sum.h, exit Prod.h, welcome vectorization of redux() !
* add vectorization for minCoeff and maxCoeff
2009-02-12 15:18:59 +00:00
Gael Guennebaud
cbbc6d940b * add ei_predux_mul internal function
* apply Ricard Marxer's prod() patch with fixes for the vectorized path
2009-02-10 18:06:05 +00:00
Gael Guennebaud
a9688f0b71 - add diagonal * sparse product as an expression
- split sparse_basic unit test
- various fixes in sparse module
2009-02-09 09:59:30 +00:00
Gael Guennebaud
24808dc090 force the use of debug version of QtCore unless it is not available 2009-02-06 21:50:18 +00:00
Gael Guennebaud
1c24f5bbc5 eventually MSVC does not like my /O2 flags (incompatibility with other option set by default) 2009-02-06 15:29:40 +00:00
Gael Guennebaud
6fbca94803 apply Ricard patch for Reverse with minor modifications 2009-02-06 09:01:50 +00:00
Gael Guennebaud
dc97079905 add optimization flag for MSVC and heavy tests
remove unsupported namespace
2009-02-05 22:13:50 +00:00
Gael Guennebaud
7c374394ee remove explicit fortran dependency in FindCholmod 2009-02-05 10:34:41 +00:00
Gael Guennebaud
da45184635 add custom FindBLAS FindLAPACK working for c++ compiler
fix issues in Cholmod/Taucs supports
2009-02-05 09:36:52 +00:00
Gael Guennebaud
95db32fcdc setup the unsupported directory structure.
The unsupported module documentation is automatically generated in:
  build/doc/unsupported/
with bidirectional cross references.
I leave a class Foo in AdolcForward module to illustrate the
cross-reference behavior. I will remove it in the next commit.
2009-02-04 15:37:00 +00:00
Keir Mierle
b4777379d4 Add Matrix::resizeLike(other) convenience function and test. 2009-02-03 01:43:59 +00:00
Gael Guennebaud
4b09865b8f check GSL version in cmake files 2009-01-27 16:04:16 +00:00
Gael Guennebaud
d7f60257dd small fix related to GSL cmake stuff 2009-01-26 20:00:41 +00:00
Gael Guennebaud
899e2ada15 very minor update in test/CMakeLists.txt 2009-01-23 13:17:57 +00:00
Gael Guennebaud
d3dcb04f2d * fix compilation with gcc 3.4
* add an option to disable Qt testing
2009-01-23 09:50:16 +00:00
Marijn Kruisselbrink
a5fbf27843 don't claim googlehash is there when only qt4 has been found :) 2009-01-20 22:15:51 +00:00
Gael Guennebaud
f645d1f911 * complete the support of QVector via a QtAlignedMalloc header
* add a unit test for QVector which shows the issue with QVector::fill
2009-01-20 16:50:47 +00:00
Gael Guennebaud
c4c70669d1 Big rewrite in the Sparse module: SparseMatrixBase no longer inherits MatrixBase.
That means a lot of features which were available for sparse matrices
via the dense (and super slow) implemention are no longer available.
All features which make sense for sparse matrices (aka can be implemented efficiently) will be
implemented soon, but don't expect to see an API as rich as for the dense path.
Other changes:
* no block(), row(), col() anymore.
* instead use .innerVector() to get a col or row vector of a matrix.
* .segment(), start(), end() will be back soon, not sure for block()
* faster cwise product
2009-01-14 14:24:10 +00:00
Gael Guennebaud
af5034b3c0 add a clean configuration summary for the unit tests (useful to analyze the dashboards) 2009-01-12 13:40:02 +00:00
Gael Guennebaud
92959aa5f3 add the possiblity to disable Fortran (workaround cmake's bug 2009-01-12 12:51:40 +00:00
Gael Guennebaud
9e8f437a6f extend stdvector test with more push_back... 2009-01-11 21:59:04 +00:00
Benoit Jacob
335d3bcf05 Based on code + help from Alex Stapleton:
*Add Eigen/StdVector header.
Including it #includes<vector> and "Core" and generates a partial
specialization of std::vector<T> for T=Eigen::Matrix<...>
that will work even with vectorizable fixed-size Eigen types
(working around a design issue in the c++ STL)
*Add unit-test

CCMAIL: alex.stapleton@gmail.com
2009-01-09 23:26:45 +00:00
Gael Guennebaud
af27fb7590 Add cdash.org support:
* the dashboard is there: http://my.cdash.org/index.php?project=Eigen
* now you can run the tests from the top build dir
  and submit report like that (from the top build dir):
  ctest -D Experimental
* todo:
 - add some nighlty builds (I'll add a few on my computer)
 - add valgrind memory checks, performances tests, compilation time tests, etc.
2009-01-08 11:53:21 +00:00
Gael Guennebaud
cb71dc4bbf Add a vectorization_logic unit test for assign and sum.
Need to add dot and more tests, but it seems I've already
found some room for improvement in sum.
2009-01-07 22:20:03 +00:00
Gael Guennebaud
709e903335 Sparse module:
* extend unit tests
* add support for generic sum reduction and dot product
* optimize the cwise()* : this is a special case of CwiseBinaryOp where
  we only have to process the coeffs which are not null for *both* matrices.
  Perhaps there exist some other binary operations like that ?
2009-01-07 17:01:57 +00:00
Armin Berres
dae7f065d4 didn't meant to commit the fortran check. but anyway, unfortunately it doesn't work the way iot should. the test fails and cmake will terminate if it doesn't find a fortran compiler 2009-01-05 14:40:27 +00:00
Armin Berres
ab660a4d29 inherit from ei_with_aligned_operator_new even with disabled vectorization 2009-01-05 14:35:07 +00:00
Benoit Jacob
3958e7f751 add unit-test checking the assertion on unaligned arrays -- checking
that it's triggered when and only when it should.
2008-12-31 00:05:22 +00:00
Benoit Jacob
4336cf3833 * add unit-tests to check allowed and forbiddent mixing of different scalar types
* fix issues in Product revealed by this test
* in Dot.h forbid mixing of different types (at least for now, might allow real.dot(complex) in the future).
2008-12-22 19:17:44 +00:00
Benoit Jacob
9e00d94543 * the Upper->UpperTriangular change
* finally get ei_add_test right
2008-12-20 13:36:12 +00:00
Benoit Jacob
21ab65e4b3 fix nasty little bug in ei_add_test 2008-12-20 01:13:38 +00:00
Gael Guennebaud
6e138d0069 more MSVC cmake fixes 2008-12-17 18:37:04 +00:00
Gael Guennebaud
4cb63808d4 some cmake fixes for windows and GSL 2008-12-17 17:50:43 +00:00
Gael Guennebaud
20c11bc52c prefix all Eigen cmake variable with EIGEN_ and switched to lowercase for all cmake files 2008-12-02 12:59:10 +00:00
Gael Guennebaud
eb9dadf3b2 clean FindUmfpack.cmake wrt enable_language(Fortran) 2008-12-02 12:20:13 +00:00
Gael Guennebaud
86ccd99d8d Several improvements in sparse module:
* add a LDL^T factorization with solver using code from T. Davis's LDL
  library (LPGL2.1+)
* various bug fixes in trianfular solver, matrix product, etc.
* improve cmake files for the supported libraries
* split the sparse unit test
* etc.
2008-11-05 13:47:55 +00:00
Gael Guennebaud
9f873a855f unit-tests: link to external libs only for the tests which require them 2008-10-26 21:38:30 +00:00
Gael Guennebaud
94f6f2a7de Add an axis aligned box in the geometry module.
Some naming questions:
- for "extend" we could also think of: "expand", "union", "add"
- same for "clamp": "crop", "intersect"
- same for "contains": "isInside", "intersect"
=> ah "intersect" is conflicting, so that eliminates this one !
2008-10-26 15:04:31 +00:00
Gael Guennebaud
cf0f82ecbe sparse module:
- remove some useless stuff => let's focus on a single sparse matrix format
 - finalize the new RandomSetter
2008-10-21 13:35:04 +00:00
Gael Guennebaud
5066fe8bbe * sparse LU: add extraction of L,U,P, and Q, as well as determinant
for both backends.
* extended a bit the sparse unit tests
2008-10-20 17:03:09 +00:00
Gael Guennebaud
e1c50a3cb1 add unit tests for sparse LU and fix a couple of warnings 2008-10-20 11:37:45 +00:00
Gael Guennebaud
fa27cd1ed0 * add cmake files to find (optional) supported libraries
* add unit tests for sparse cholesky
2008-10-20 10:43:11 +00:00
Gael Guennebaud
a930dfb229 extend sparse unit tests with transpose and matrix product 2008-10-04 14:25:00 +00:00
Gael Guennebaud
52406aecad * Extend a bit ParametrizedLine and move it to a separate file,
add unit-tests for it.
* remove "using namespace std" in test/main.h such that the compilation
  bug found today in SVD won't happen again.
2008-09-03 22:35:45 +00:00
Gael Guennebaud
f52d119b9c Solve a big issue with data alignment and dynamic allocation:
* add a WithAlignedOperatorNew class with overloaded operator new
* make Matrix (and Quaternion, Transform, Hyperplane, etc.) use it
  if needed such that "*(new Vector4) = xpr" does not failed anymore.
* Please: make sure your classes having fixed size Eigen's vector
  or matrice attributes inherit WithAlignedOperatorNew
* add a ei_new_allocator STL memory allocator to use with STL containers.
  This allocator really calls operator new on your types (unlike GCC's
  new_allocator). Example:
  std::vector<Vector4f> data(10);
  will segfault if the vectorization is enabled, instead use:
  std::vector<Vector4f,ei_new_allocator<Vector4f> > data(10);
NOTE: you only have to worry if you deal with fixed-size matrix types
with "sizeof(matrix_type)%16==0"...
2008-09-03 00:32:56 +00:00
Gael Guennebaud
9b4d46c82e * Add an HyperPlane class in the Geometry module
with its respective unit-test.
  Feel free to discuss the API on the ML.
* Some bugfix in unitOrthogonal found by the hyperplane unit test.
2008-08-28 17:44:27 +00:00
Gael Guennebaud
ba100998bf * split Meta.h to Meta.h (generic meta programming) and XprHelper.h (relates to eigen mechanism)
* added a meta.cpp unit test
* EIGEN_TUNE_FOR_L2_CACHE_SIZE now represents L2 block size in Bytes (whence the ei_meta_sqrt...)
* added a CustomizeEigen.dox page
* added a TOC to QuickStartGuide.dox
2008-08-24 15:15:32 +00:00
Gael Guennebaud
bfe86b8fc0 * add documentation of the cool (?) "print with format" feature
* move the ioformat.cpp test to a documentation example
* rename IoFormat => IOFormat
2008-08-23 19:41:00 +00:00
Gael Guennebaud
2120fed849 * bug fixes in: Dot, generalized eigen problem, singular matrix detetection in Cholesky
* fix all numerical instabilies in the unit tests, now all tests can be run 2000 times
  with almost zero failures.
2008-08-23 15:14:20 +00:00
Gael Guennebaud
60804c306d *patch by Daniel Gomez:
- bugfix in SparseMatrix
 - add a sparse unit test
* renamed Transform::affine => linear
2008-08-21 17:02:47 +00:00
Gael Guennebaud
f729fc1d70 * Add the possibility to customize the output of matrices, e.g.:
IoFormat OctaveFmt(4, AlignCols, ", ", ";\n", "", "", "[", "]");
   cout << mat.format(OctaveFmt);
  The first "4" is the precision.
  Documentation missing.
* Some compilation fixes
2008-08-21 13:17:21 +00:00
Gael Guennebaud
fd681507dc Add a packetmath unit test, re-enable the comma-initializer unit test,
and bug fix in PacketMath/SSE
2008-08-20 20:08:38 +00:00
Benoit Jacob
ff8e98c974 Fix bugs in Sum.h, add unit-test 2008-08-20 16:43:28 +00:00
Gael Guennebaud
104f8fd36e Added a SVD module:
- the decompostion code has been adfapted from JAMA
 - handles non square matrices of size MxN with M>=N
 - does not work for complex matrices
 - includes a solver where the parts corresponding to zero singular values are set to zero
2008-08-19 17:52:04 +00:00
Gael Guennebaud
a6d387a359 Various compilation fixes for MSVC 9. All tests compile but some
still fail at runtime in ei_aligned_free() (even without vectorization).
2008-08-19 11:06:40 +00:00
Benoit Jacob
17ec407ccd * add Regression module, from eigen1, improved, with doc and unit-test.
* fix .normalized() so that Random().normalized() works; since the return
type became complicated to write down i just let it return an actual
vector, perhaps not optimal.
* add Sparse/CMakeLists.txt. I suppose that it was intentional that it
didn't have CMakeLists, but in <=2.0 releases I'll just manually remove
Sparse.
2008-08-11 02:25:40 +00:00
Benoit Jacob
d6e88f8155 * add LU unit-test. Seems like we have very good numerical stability!
* some cleanup, and grant me a copyright line on the determinant test.
2008-08-09 19:26:14 +00:00
Benoit Jacob
681e944670 *implement LU solver (solves any rectangular system)
*in test/CMakeLists : modify EI_ADD_TEST so that 2nd argument is
additional compiler flags. used to add -O2 to test_product_large so it
doesn't take forever.
2008-08-09 15:23:54 +00:00
Benoit Jacob
c2f8ecf466 * LU decomposition, supporting all rectangular matrices, with full
pivoting for better numerical stability. For now the only application is
determinant.
* New determinant unit-test.
* Disable most of Swap.h for now as it makes LU fail (mysterious).
Anyway Swap needs a big overhaul as proposed on IRC.
* Remnants of old class Inverse removed.
* Some warnings fixed.
2008-08-04 04:45:59 +00:00
Gael Guennebaud
55aeb1f83a Optimizations:
* faster matrix-matrix and matrix-vector products (especially for not aligned cases)
 * faster tridiagonalization (make it using our matrix-vector impl.)
Others:
 * fix Flags of Map
 * split the test_product to two smaller ones
2008-08-01 23:44:59 +00:00
Benoit Jacob
8a967fb17c * implement slice vectorization. Because it uses unaligned
packet access, it is not certain that it will bring a performance
  improvement: benchmarking needed.
* improve logic choosing slice vectorization.
* fix typo in SSE packet math, causing crash in unaligned case.
* fix bug in Product, causing crash in unaligned case.
* add TEST_SSE3 CMake option.
2008-06-22 15:02:05 +00:00
Gael Guennebaud
54238961d6 * added a pseudo expression Array giving access to:
- matrix-scalar addition/subtraction operators, e.g.:
       m.array() += 0.5;
   - matrix/matrix comparison operators, e.g.:
      if (m1.array() < m2.array()) {}
* fix compilation issues with Transform and gcc < 4.1
2008-06-20 12:38:03 +00:00
Gael Guennebaud
fbbd8afe30 Started a Transform class in the Geometry module to represent
homography.
Fix indentation in Quaternion.h
2008-06-15 08:33:44 +00:00
Gael Guennebaud
f07f907810 Add QR and Cholesky module instantiations in the lib.
To try it with the unit tests set the cmake variable TEST_LIB to ON.
2008-06-14 13:02:41 +00:00
Gael Guennebaud
a9cf229e15 add a geometry unit test and fix a couple of typo in Quaternion.h 2008-06-03 07:32:12 +00:00
Gael Guennebaud
f2ebbee274 added unit tests for sizeof and dynamic memory allocation 2008-06-02 14:54:52 +00:00
Gael Guennebaud
d5cbb1d002 added a unit test for Inverse
discovered that m1 == m1.inverse().inverse() fails though
m1.inverse()*m1 == I
2008-05-31 23:44:11 +00:00
Gael Guennebaud
64169389ed added an *optional* Eigen2 dynamic library.
it allows the possiblity to save some compilation time by linking to it
*and* defining the token EIGEN_EXTERN_INSTANCIATIONS
2008-05-31 23:21:49 +00:00