Commit Graph

597 Commits

Author SHA1 Message Date
Marcus D. Hanwell
ef582933c1 Proper fix for linking to the Qt libraries (and others)
My initial fix was incorrect, the libraries must be quoted when being
passed to the add test macro, but must be unquoted when passed to the
target_link_libraries function.
2009-08-21 14:04:17 -04:00
Benoit Jacob
c7ae261ac0 adapt to API changes 2009-08-20 01:29:38 -04:00
Gael Guennebaud
ff0f005d4c change the make householder algorithm so that the remaining coefficient
is real, and make Tridiagonalization use it
2009-08-17 17:04:32 +02:00
Gael Guennebaud
737bed19c1 make HouseholderQR uses the Householder module 2009-08-16 19:22:15 +02:00
Benoit Jacob
03c1e79f35 svd: sort in decreasing order, remove unused code 2009-08-15 19:20:48 -04:00
Gael Guennebaud
239ada95b7 add overloads of lazyAssign to detect common aliasing issue with
transpose and adjoint
2009-08-15 22:19:29 +02:00
Gael Guennebaud
50c703f0c7 As proposed on the list:
- rename EvalBeforeAssignBit to MayAliasBit
- make .lazy() remove the MayAliasBit only, and mark it as deprecated
- add a NoAlias pseudo expression, and MatrixBase::noalias() function
Todo:
- we have to decide whether += and -= assume no aliasing by default ?
- once we agree on the API: update the Sparse module and the unit tests respectively.
2009-08-15 18:35:51 +02:00
Gael Guennebaud
109a4f650b fix a couple of warnings 2009-08-15 10:20:01 +02:00
Gael Guennebaud
846e8b49ba fix compilation of unit tests 2009-08-15 10:18:05 +02:00
Gael Guennebaud
afbd73b5cd overload operartor* with a ProductBase such that "scalar * (mat * mat)" is optimized
as one could naturally expect
2009-08-11 15:15:06 +02:00
Gael Guennebaud
9822493aaf fixes in determinant and homogeneous 2009-08-06 16:54:55 +02:00
Gael Guennebaud
3ac01b1400 compilation fix in EigenSolver,
bugfix in PartialLU
2009-08-06 16:41:54 +02:00
Gael Guennebaud
1d4fea48b5 fix a couple of compilations issues 2009-08-06 14:10:02 +02:00
Gael Guennebaud
56d00779db more product refactoring 2009-08-06 12:20:02 +02:00
Gael Guennebaud
88147e0a91 big refactoring in Product.h:
- all specialized products now inherits ProductBase
- the default product evaluated by Assign is still here,
  but it is currently enabled for small fixed sizes only
- => this significantly speed up compilation for large matrices
- I left the OuterProduct specialization empty as an exercise...
2009-08-05 15:23:35 +02:00
Gael Guennebaud
7d607048a9 implement a ProductBase class and, as a proof of concept, update TriangularProduct
and SelfAdjointMatrixProduct to take advantage of it => fewer LOC
2009-08-04 16:54:17 +02:00
Gael Guennebaud
2089a263f8 merge 2009-08-04 11:31:25 +02:00
Gael Guennebaud
4bec101470 implement two levels of blocking in PartialLU => high speedup 2009-08-04 11:28:02 +02:00
Benoit Jacob
523cdedf58 make the dot product linear in the second variable, not the first variable 2009-08-03 17:20:45 +02:00
Gael Guennebaud
912da9fade merge with special_matrix branch 2009-08-03 16:17:32 +02:00
Gael Guennebaud
a8f943127c merge 2009-08-03 16:11:30 +02:00
Benoit Jacob
d10c710b15 add new Householder module 2009-08-03 16:06:57 +02:00
Gael Guennebaud
ce1dc1ab16 implements a blocked version of PartialLU 2009-08-03 12:11:18 +02:00
Gael Guennebaud
0103de8512 bugfix in trsm 2009-08-02 15:32:43 +02:00
Benoit Jacob
cd49780143 apply patch from Marcus Hanwell: Improved quoting of tests when added to the build 2009-08-02 15:09:34 +02:00
Gael Guennebaud
48fc64458c add blocked LLT, and bugfix in trsm asserts 2009-08-01 23:42:51 +02:00
Gael Guennebaud
18429156a1 add selfadjointView from a trinagularView 2009-07-31 17:35:55 +02:00
Gael Guennebaud
864171df5c fix a couple of issues related to recent products 2009-07-28 18:11:30 +02:00
Gael Guennebaud
54804eb626 synch with main branch 2009-07-28 17:35:07 +02:00
Gael Guennebaud
264fe82c65 add a debug mechanism to compute the number of intermediate evaluations (only for dynamic size) 2009-07-28 17:13:13 +02:00
Gael Guennebaud
5f3606bce9 bug fix in inverse for 1x1 matrix,
some compilation fixes in sparse_solvers
2009-07-27 18:09:56 +02:00
Gael Guennebaud
94cc30180e compilation fixes 2009-07-27 13:50:23 +02:00
Gael Guennebaud
0590c18555 various compilation and bug fixes in selfadjoint stuff 2009-07-27 13:17:39 +02:00
Gael Guennebaud
f95b77be62 trmm is now fully working and available via TriangularView::operator* 2009-07-27 11:42:54 +02:00
Gael Guennebaud
f3fde74695 finalize trsm: works in all situations, and it is now used by solve() and solveInPlace() 2009-07-26 13:01:37 +02:00
Gael Guennebaud
82c5438c95 split and add unit tests for symm and syrk,
the .rank*update() functions now returns a reference to *this
2009-07-23 21:22:51 +02:00
Gael Guennebaud
713c92140c improve SYMV it is now faster and ready for use 2009-07-23 14:20:45 +02:00
Gael Guennebaud
ddb3ac98a2 addd matrix * self adjoint high level API 2009-07-23 10:05:38 +02:00
Gael Guennebaud
f696efc00e bugfix in SYMM 2009-07-22 23:48:42 +02:00
Gael Guennebaud
0cb4f32e12 implement high level API for SYMM and fix a couple of bugs related to complex 2009-07-22 23:12:22 +02:00
Gael Guennebaud
d6627d540e * refactoring of the matrix product into multiple small kernels
* started an efficient selfadjoint matrix * general matrix product
  based on the generic kernels ( => need a very little LOC)
2009-07-21 16:58:35 +02:00
Gael Guennebaud
afa8f2ca95 * various fixes related to sub diagonals and band matrix
* allows 0 sized objects in Block/Map
2009-07-21 11:19:52 +02:00
Gael Guennebaud
4375c043ac minor compilation fixes for Sun CC and ICC 2009-07-20 13:27:41 +02:00
Gael Guennebaud
a551107cce bugfix for a = a * b; when a has to be resized 2009-07-20 10:35:47 +02:00
Gael Guennebaud
32b08ac971 re-implement stableNorm using a homemade blocky and
vectorization friendly algorithm (slow if no vectorization)
2009-07-17 16:22:39 +02:00
Gael Guennebaud
34490f1493 * bugfixes in Product, and test/product_selfadjoint
* speed up in the extraction of the matrix Q in Tridiagonalization
2009-07-16 00:03:17 +02:00
Gael Guennebaud
97c9445c60 synch with main devel branch 2009-07-15 19:54:31 +02:00
Gael Guennebaud
df6561a73f change the implementation of BandMatrix to follow the BLAS/LAPACK storage scheme 2009-07-15 17:00:49 +02:00
Gael Guennebaud
1578421ed1 fix issue #25 : the problem was that we assumed Dynamic was a multiple of a packet size
(also disable the test of blueNorm)
2009-07-15 14:20:45 +02:00
Gael Guennebaud
587029a612 started an implementation of BandMatrix: at least the read/write access
to the main/sub/super diagonals seems to work well.
2009-07-14 23:27:37 +02:00
Gael Guennebaud
8120a5cecd synch with main devel branch 2009-07-14 23:06:25 +02:00
Gael Guennebaud
7a9519a9be fix typo in blue norm 2009-07-14 23:00:53 +02:00
Gael Guennebaud
f5d2317b12 add a blueNorm() function implementing the Blues's stable norm
algorithm. it is currently provided for experimentation
purpose only.
2009-07-13 21:14:47 +02:00
Gael Guennebaud
1e7b1a8a85 add a SparseNestByValue expression and fix issue in sparse adjoint evaluation 2009-07-13 14:55:03 +02:00
Gael Guennebaud
a2cf7ba955 add triangular * vector product 2009-07-13 13:17:55 +02:00
Gael Guennebaud
a2087cd7a3 Add an efficient rank2 update function (like the level2 blas xSYR2 routine).
Note that it is already used in Tridiagonalization.
2009-07-11 21:14:59 +02:00
Gael Guennebaud
ec5c608aa3 Set of fixes and workaround to make sun studio more happy.
Still remains the problem of alignment and vectorization.
2009-07-10 16:10:03 +02:00
Gael Guennebaud
b47dea8b7a add a meta unroller for the triangular solver (only for vectors as rhs) 2009-07-10 11:30:46 +02:00
Gael Guennebaud
1a1b2e9f27 finally directly calling the low-level products is faster 2009-07-10 10:41:26 +02:00
Gael Guennebaud
fa60c72398 started to simplify the triangular solvers 2009-07-09 17:11:03 +02:00
Gael Guennebaud
96e7d9f896 ok now all the complex mat-mat and mat-vec products involving conjugate,
adjoint, -, and scalar multiple seems to be well handled. It only remains
the simpler case: C = alpha*(A*B) ... for the next commit
2009-07-08 18:24:37 +02:00
Gael Guennebaud
13b2dafb50 conjugate expressions are now properly caught by Product
=> significant speedup in expr. like a.adjoint() * b,
   for complex scalar type (~ x3)
2009-07-07 21:30:20 +02:00
Gael Guennebaud
79877a9917 * take advantage of new possibilies in LLT (mat -= product)
* fix Block::operator+= product which was not optimized
* fix some compilation issues
2009-07-07 15:32:21 +02:00
Gael Guennebaud
92a35c93b2 * extended the cache friendly products to support C = alpha * A * M and C += alpha * A * B
* this allows to optimize xpr like C -= lazy_product, still have to catch "scalar_product_of_lazy_product"
* started to support conjugate in cache friendly products (very useful to evaluate A * B.adjoint() without
  evaluating B.adjoint() into a temporary
* compilation fix
2009-07-07 11:39:19 +02:00
Gael Guennebaud
1aea45335f * bybye Part, welcome TriangularView and SelfAdjointView.
* move solveTriangular*() to TriangularView::solve*()
* move .llt() to SelfAdjointView
* add a high level wrapper to the efficient selfadjoint * vector product
* improve LLT so that we can specify which triangular part is meaningless
=> there are still many things to do (doc, cleaning, improve the matrix products, etc.)
2009-07-06 23:43:20 +02:00
Benoit Jacob
e093b43b2c * rename QR to HouseholderQR because really that impacts the API, not just the impl.
* rename qr() to householderQr(), for same reason.
* clarify that it's non-pivoting, non-rank-revealing, so remove all the rank API, make solve() be void instead of bool, update the docs/test, etc.
* fix warning in SVD
2009-07-06 17:12:10 +02:00
Gael Guennebaud
0c2232e5d9 quick reimplementation of SVD from the numeral recipes book:
this is still not Eigen style code but at least it works for
n>m and it is more accurate than the JAMA based version. (I needed
it now, this is why I did that)
2009-07-06 13:47:41 +02:00
Manuel Yguel
c398d0edcf another test in the non invertible case 2009-07-04 14:55:25 +02:00
Gael Guennebaud
08e419dcb1 * update sparse module wrt new diagonal matrix impl
* fix a bug is SparseMatrix
2009-07-04 11:16:27 +02:00
Benoit Jacob
7b750182f2 * polish computeInverseWithCheck to share more code, fix documentation, fix coding style
* add snippet for computeInverseWithCheck documentation
* expand unit-tests to cover computeInverseWithCheck
2009-06-29 22:07:37 +02:00
Benoit Jacob
2de9b7f537 fully vectorize DiagonalProduct
(it used to be partially vectorized and that had been lost in the big changes from the previous commit)
2009-06-29 04:01:31 +02:00
Benoit Jacob
6809f7b1cd new implementation of diagonal matrices and diagonal matrix expressions 2009-06-28 21:27:37 +02:00
Gael Guennebaud
627595ad19 * rename PartialRedux to VectorwiseOp
* add VectorwiseOp's +, -, +=, -= operators
2009-06-10 11:20:30 +02:00
Benoit Jacob
ee92009fd8 make Umeyama, and its unit-test, work for me on gcc 4.3 2009-05-27 23:10:24 +02:00
Hauke Heibel
4d1e492c00 * Umeyama has now similar performance for RowMajor and ColMajor layouts.
* Fixed a bug in umeyama for fixed size matrices.
* Fixed the umeyama unit test for fixed size matrices.
* Added XprHelper::ei_plain_matrix_type_row_major.
2009-05-27 19:24:05 +02:00
Hauke Heibel
db5647abae Added Umeyama implementation. 2009-05-26 19:22:25 +02:00
Benoit Jacob
7667a93cbe merge 2009-05-22 20:31:26 +02:00
Benoit Jacob
6347b1db5b remove sentence "Eigen itself is part of the KDE project."
it never made very precise sense. but now does it still make any?
2009-05-22 20:25:33 +02:00
Hauke Heibel
c7303a876f Oops, here the actual LLT and LDLT patch. 2009-05-22 15:58:20 +02:00
Hauke Heibel
0523b64fe9 Eigensolver decomposition interface unification.
Added default ctor and public compute method as
well as safe-guards against uninitialized usage.
Added unit tests for the safe-guards.
2009-05-22 14:27:58 +02:00
Hauke Heibel
2c247fc8a8 LU and PartialLU decomposition interface unification.
Added default ctor and public compute method as well
as safe-guards against uninitialized usage.
Added unit tests for the safe-guards.
2009-05-22 14:27:58 +02:00
Hauke Heibel
5c5789cf0f QR and SVD decomposition interface unification.
Added default ctor and public compute method as
well as safe-guards against uninitialized usage.
Added unit tests for the safe-guards.
2009-05-22 14:27:58 +02:00
Gael Guennebaud
dd45c4805c * add a writable generic coeff wise expression (CwiseUnaryView)
* add writable .real() and .imag() functions
2009-05-20 15:41:23 +02:00
Gael Guennebaud
f47c4b5da8 update cdash testsuite file to use mercurial 2009-05-19 09:24:22 +02:00
Gael Guennebaud
e186728867 fix #1 : need to nest by value the affine part in homogeneous product 2009-05-18 17:55:50 +02:00
Jitse Niesen
e3d64cb418 Fix compilation error in createRandomMatrixOfRank() 2009-05-17 21:17:45 +01:00
Hauke Heibel
6358c12998 * introduced method createRandomMatrixOfRank (R = U*D*V where U,V unitary, D r-by-c diag. with rank non-zero values)
* switched lu/qr tests to be using createRandomMatrixOfRank
* removed unused methods doSomeRankPreservingOperations
* removed NOTE about doSomeRankPreservingOperations
2009-05-17 16:07:12 +02:00
Gael Guennebaud
877c3c00a2 enable testing of complex numbers for taucs 2009-05-12 13:43:40 +00:00
Gael Guennebaud
f5b5571a5a compilation fixes 2009-05-12 07:32:34 +00:00
Gael Guennebaud
9b256d997e various minor updates of some unit tests 2009-05-11 11:09:41 +00:00
Benoit Jacob
9afd1324fd constant Diagonal ---> DiagonalBits
introduce ei_is_diagonal to check for it
DiagonalCoeffs ---> Diagonal and allow Index to by Dynamic
-> add MatrixBase::diagonal(int) with unittest and doc
2009-05-10 16:24:39 +00:00
Benoit Jacob
eac79b6d2e CREDIT Hauke Heibel, fix MSVC warnings 2009-05-09 03:41:17 +00:00
Benoit Jacob
4f0af00e51 *add missing overloads of setZero, etc... that were mentioned in the tutorial
--->they go into Matrix as they resize.
*add isConstant() alias to isApproxToConstant()
*extend unit-test
*change an assert into a static assert
2009-05-06 21:40:24 +00:00
Gael Guennebaud
1e286464ab * compilation fixes for gcc 3.3
* test Part::swap
2009-05-06 08:43:38 +00:00
Benoit Jacob
2b2f0c0220 fix linearRegression, fix doc, add unit test (it was untested since the change
making fitHyperplane no longer use it)
2009-05-05 16:50:58 +00:00
Gael Guennebaud
2829314284 new simplified API to fill sparse matrices (the old functions are
deprecated). Basically there are now only 2 functions to set a
coefficient:
1) mat.coeffRef(row,col) = value;
2) mat.insert(row,col) = value;
coeffRef has no limitation, insert assumes the coeff has not already
been set, and raises an assert otherwise.
In addition I added a much lower level, but more efficient filling
mechanism for
internal use only.
2009-05-04 14:25:12 +00:00
Gael Guennebaud
469b8aa380 "forgot to commit the required changes in stdvector unit test" 2009-05-03 15:39:37 +00:00
Benoit Jacob
95bda5e6ab let the user disable alignment altogether by #defining EIGEN_DONT_ALIGN.
Until now, the user had to edit the source code to do that.
Internally, add EIGEN_ALIGN that takes into account both EIGEN_DONT_ALIGN.and
EIGEN_ARCH_WANTS_ALIGNMENT. From now on, only EIGEN_ALIGN should be used to
test whether we want to align.
2009-05-03 13:50:56 +00:00
Benoit Jacob
746079f75d gni, forgot to call the new subtest 2009-04-29 17:01:10 +00:00
Benoit Jacob
8b1e7c2792 add cast<>() tests. including a vectorization_logic test that currently fails (casting to same type should not prevent vectorization) 2009-04-29 14:51:19 +00:00
Gael Guennebaud
804a239d30 patch from Moritz Lenz to allow solving transposed problem with superlu 2009-04-10 19:54:43 +00:00
Gael Guennebaud
22edf77470 add a 4x4 inverse case which is not handled by the current
ei_compute_inverse_in_size4_case (reported by mikola on IRC)
2009-04-09 21:55:29 +00:00
Gael Guennebaud
5b1d0cebc5 sparse module: new API proposal for triangular solves and experimental
solver support with a sparse matrix as the rhs.
2009-04-05 16:30:10 +00:00
Benoit Jacob
2f45eeb0c6 More Cholesky fixes.
* Cholesky decs are NOT rank revealing so remove all the rank/isPositiveDefinite etc stuff.
* fix bug in LLT: s/return/continue/
* introduce machine_epsilon constants, they are actually needed for Higman's formula determining
  the cutoff in Cholesky. Btw fix the page reference to his book (chat with Keir).
* solve methods always return true, since this isn't a rank revealing dec. Actually... they already did always return true!! Now it's explicit.
* updated dox and unit-test
2009-04-01 00:21:16 +00:00
Benoit Jacob
bf596d0b3a add adjointInPlace() and add documentation warnings on adjoint() and transpose() about aliasing effects. 2009-03-31 13:55:40 +00:00
Benoit Jacob
a1ba995f05 Many improvements in LLT and LDLT:
* in LDLT, support the negative semidefinite case
* fix bad floating-point comparisons, improves greatly the accuracy of methods like
  isPositiveDefinite() and rank()
* simplifications
* identify (but not resolve) bug: claim that only triangular part is used, is inaccurate
* expanded unit-tests
2009-03-30 21:45:45 +00:00
Gael Guennebaud
49fc1e3e84 add vectorization of sqrt for float 2009-03-27 14:41:46 +00:00
Gael Guennebaud
17860e578c add SSE2 versions of sin, cos, log, exp using code from Julien
Pommier. They are for float only, and they return exactly the same
result as the standard versions in about 90% of the cases. Otherwise the max error
is below 1e-7. However, for very large values (>1e3) the accuracy of sin and cos
slighlty decrease. They are about 3 or 4 times faster than 4 calls to their respective
standard versions. So, is it ok to enable them by default in their respective functors ?
2009-03-25 12:26:13 +00:00
Gael Guennebaud
f4cf5e9b26 split and extend eigen-solver tests 2009-03-23 14:38:59 +00:00
Gael Guennebaud
fbf415c547 add vectorization of unary operator-() (the AltiVec version is probably
broken)
2009-03-20 10:03:24 +00:00
Gael Guennebaud
b8f46090ff add optimized cross3 function (code from Rohit Garg) 2009-03-11 14:20:36 +00:00
Gael Guennebaud
3f80c68be5 add the vectorization of abs 2009-03-09 18:40:09 +00:00
Gael Guennebaud
3ac42fed94 big rework of the Transform class:
* add Projective and AffineCompact modes as an optional third template
  argument
* extend Transform::operator* to support more use cases
2009-03-08 11:35:30 +00:00
Gael Guennebaud
fa9f7708d4 add efficient matrix product specializations for Homogeneous 2009-03-05 16:40:56 +00:00
Gael Guennebaud
0be89a4796 big addons:
* add Homogeneous expression for vector and set of vectors (aka matrix)
  => the next step will be to overload operator*
* add homogeneous normalization (again for vector and set of vectors)
* add a Replicate expression (with uni-directional replication
  facilities)
=> for all of them I'll add examples once we agree on the API
* fix gcc-4.4 warnings
* rename reverse.cpp array_reverse.cpp
2009-03-05 10:25:22 +00:00
Gael Guennebaud
40774c625e add a proof of concept autodiff jacobian helper class based on adolc
with unit test and FindAdolc cmake module
2009-02-27 16:19:13 +00:00
Gael Guennebaud
170128770a compilation fix + test orho methods for complex 2009-02-26 10:09:23 +00:00
Gael Guennebaud
de014efdaf * split CacheFriendlyProduct into multiple smaller files
* add an efficient selfadjoint * vector implementation (= blas symv)
  perf are inbetween MKL and GOTO
  => the interface is still missing (have to be rethougth)
2009-02-21 20:20:38 +00:00
Gael Guennebaud
ee04c5c874 add tests showing bug in unitOrthogonal such that we don't forget it! 2009-02-17 09:57:32 +00:00
Gael Guennebaud
e6f1104b57 * fix Quaternion::setFromTwoVectors (thanks to "benv" from the forum)
* extend PartialRedux::cross() to any matrix sizes with automatic
  vectorization when possible
* unit tests: add "geo_" prefix to all unit tests related to the
  geometry module and start splitting the big "geometry.cpp" tests to
  multiple smaller ones (also include new tests)
2009-02-17 09:53:05 +00:00
Gael Guennebaud
c5245a3388 update vectorization_logic unit test wrt previous sum/redux change 2009-02-13 08:45:19 +00:00
Gael Guennebaud
20a8bb96eb fix m = m*m with m sparse (gug found by Frederik Heinz) 2009-02-12 15:57:13 +00:00
Gael Guennebaud
51c991af45 * exit Sum.h, exit Prod.h, welcome vectorization of redux() !
* add vectorization for minCoeff and maxCoeff
2009-02-12 15:18:59 +00:00
Gael Guennebaud
cbbc6d940b * add ei_predux_mul internal function
* apply Ricard Marxer's prod() patch with fixes for the vectorized path
2009-02-10 18:06:05 +00:00
Gael Guennebaud
a9688f0b71 - add diagonal * sparse product as an expression
- split sparse_basic unit test
- various fixes in sparse module
2009-02-09 09:59:30 +00:00
Gael Guennebaud
3009d79a1f * allow Matrix to be resized to 0 (solve a lot of troubles with
some containers)
* new workaround for std::vector which is supposed to work for any
  classes having EIGEN_MAKE_ALIGNED_OPERATOR_NEW as discussed on ML
2009-02-07 11:16:15 +00:00
Gael Guennebaud
24808dc090 force the use of debug version of QtCore unless it is not available 2009-02-06 21:50:18 +00:00
Gael Guennebaud
1c24f5bbc5 eventually MSVC does not like my /O2 flags (incompatibility with other option set by default) 2009-02-06 15:29:40 +00:00
Gael Guennebaud
f5d96df800 Add vectorization of Reverse (was more tricky than I thought) and
simplify the index based functions
2009-02-06 12:40:38 +00:00
Gael Guennebaud
4dc4ab3abb Reverse::coeff*(int) functions are for vector only 2009-02-06 09:13:04 +00:00
Gael Guennebaud
6fbca94803 apply Ricard patch for Reverse with minor modifications 2009-02-06 09:01:50 +00:00
Gael Guennebaud
dc97079905 add optimization flag for MSVC and heavy tests
remove unsupported namespace
2009-02-05 22:13:50 +00:00
Gael Guennebaud
910b387438 Add sub/super-diagonal expression (read/write) as a trivial extension of
DiagonalCoeffs. The current API is simply:
  m.diagonal<1>() => 1st super diagonal
  m.diagonal<-2>() => the 2nd sub diagonal
I'll add a code snippet once we agree on this API.
2009-02-05 18:37:21 +00:00
Gael Guennebaud
7c374394ee remove explicit fortran dependency in FindCholmod 2009-02-05 10:34:41 +00:00
Gael Guennebaud
da45184635 add custom FindBLAS FindLAPACK working for c++ compiler
fix issues in Cholmod/Taucs supports
2009-02-05 09:36:52 +00:00
Benoit Jacob
5d69c5102b oops, #ifdef instead of #if ---> bug 2009-02-04 16:57:28 +00:00
Benoit Jacob
f81479d392 forgot to update this unit test... 2009-02-04 16:55:38 +00:00
Benoit Jacob
93a089adc8 disable alignment altogether outside of the platforms which potentially have SSE or AltiVec
This should remove most portability issues to other platforms where data alignment issues (including
overloading operator new and new[]) can be tricky, and where data alignment is not needed in the first place.
2009-02-04 16:53:03 +00:00
Gael Guennebaud
95db32fcdc setup the unsupported directory structure.
The unsupported module documentation is automatically generated in:
  build/doc/unsupported/
with bidirectional cross references.
I leave a class Foo in AdolcForward module to illustrate the
cross-reference behavior. I will remove it in the next commit.
2009-02-04 15:37:00 +00:00
Keir Mierle
b9a82be727 Add full pivoting to LDLT decomposition. 2009-02-03 17:50:35 +00:00
Keir Mierle
b4777379d4 Add Matrix::resizeLike(other) convenience function and test. 2009-02-03 01:43:59 +00:00
Gael Guennebaud
36c8a64923 add MatrixBase::stableNorm() avoiding over/under-flow
using it in QR reduced the error of Keir test from 1e-12 to 1e-24 but
that's much more expensive !
2009-01-28 22:11:56 +00:00
Gael Guennebaud
1b194193ef Big change in DiagonalMatrix and Geometry/Scaling:
* previous DiagonalMatrix expression is now DiagonalMatrixWrapper
* DiagonalMatrix class is now for storage
* add the DiagonalMatrixBase class to factorize code of the
  two previous classes
* remove Scaling class (it is now a global function)
* add UniformScaling helper class
  (don't use it directly, use the Scaling function)
* add the Scaling global function to simplify the creation
  of scaling objects
There is still a lot to do, in particular about DiagonalProduct for which
the goal is to get rid of the "if()" in the coeff() function. At least
it is not worse than before ! Also need to uptade the tutorial and add more doc.
2009-01-28 16:26:06 +00:00
Gael Guennebaud
0f15a8d829 QR: add isInjective(), isSurjective(),
mark isFullRank() deprecated,
    add solve() (mix of Keir's patch and LU::solve())
=> there is big problem with complex which are not working
2009-01-28 09:45:53 +00:00
Gael Guennebaud
8ce4503494 add support for read/write sub sets of inner vectors (sparse module) 2009-01-27 22:48:17 +00:00
Benoit Jacob
d384671793 now these tests succeed with 10,000 repeats 2009-01-27 20:47:12 +00:00
Gael Guennebaud
4ac8cabf8a fix my previous commit with EIGEN_EMPTY macro bug 2009-01-27 19:08:20 +00:00
Gael Guennebaud
4b09865b8f check GSL version in cmake files 2009-01-27 16:04:16 +00:00
Gael Guennebaud
d7f60257dd small fix related to GSL cmake stuff 2009-01-26 20:00:41 +00:00
Benoit Jacob
874ff5a0b4 fix msvc warnings (useful ones again) reported by gael on CDash 2009-01-26 17:56:04 +00:00
Gael Guennebaud
65e4ae4ff4 disable unordered_map for ICC 2009-01-26 12:47:58 +00:00
Gael Guennebaud
56c7e164f0 add partial count redux (adapted patch from Ricard Marxer) 2009-01-24 15:22:44 +00:00
Gael Guennebaud
81b0ab53cf add fill() function as an alias for setConstant 2009-01-24 10:52:18 +00:00
Gael Guennebaud
9849931500 eventually it turns out that our current
EIGEN_WORK_AROUND_QT_BUG_CALLING_WRONG_OPERATOR_NEW_FIXED_IN_QT_4_5
is the right way to go for allowing placement new on a class having
overloaded operator new. Qt 4.5 won't add the :: prefix. (I still do not
understand how you can distinghish a placement new from an overloaded
operator new taking an allocator as argument...)
2009-01-23 16:31:03 +00:00
Gael Guennebaud
e7c48fac9b sparse module: makes -= and += operator working
Question 1: why are *=scalar and /=scalar working right away ?
Same weirdness in DynamicSparseMatrix where operators += and -= work wihout
  having to redefine them ???
2009-01-23 13:59:32 +00:00
Gael Guennebaud
899e2ada15 very minor update in test/CMakeLists.txt 2009-01-23 13:17:57 +00:00
Gael Guennebaud
6a722602e6 fix a few remaining warnings
and fix commainitializer unit test with MSVC
2009-01-23 12:26:32 +00:00
Gael Guennebaud
d3dcb04f2d * fix compilation with gcc 3.4
* add an option to disable Qt testing
2009-01-23 09:50:16 +00:00
Benoit Jacob
291ee89684 add computeRotationScaling and computeScalingRotation in SVD
add convenience functions in Transform
reimplement Transform::rotation() to use that
add unit-test
2009-01-22 16:39:08 +00:00
Benoit Jacob
876b1fb842 add polar decomposition on both sides, in SVD, with test 2009-01-22 15:00:47 +00:00
Benoit Jacob
9e3c73110a fix a bunch of warnings (actual issues) reported by Frank 2009-01-22 00:09:34 +00:00
Benoit Jacob
7ccea9222c fix warnings 2009-01-21 20:06:16 +00:00
Gael Guennebaud
52cf07d266 sparse module:
* add row(i), col(i) functions
* add prune() function to remove small coefficients
2009-01-21 18:46:04 +00:00
Benoit Jacob
5f43a42ee7 * remove set(), revert to old behavior where = resizes
* try to be clever in matrix ctors and operator=: be lazy when we can, always allow
  to copy rowvector into columnvector, check the template parameters,
  try to factor the code better
* add missing copy ctor in UnalignedType
* fix bug in the traits of DiagonalProduct
* renaming: EIGEN_TUNE_FOR_CPU_CACHE_SIZE
* update the dox a little
2009-01-21 17:10:23 +00:00
Marijn Kruisselbrink
a5fbf27843 don't claim googlehash is there when only qt4 has been found :) 2009-01-20 22:15:51 +00:00
Benoit Jacob
294682a25a lu test:don't fail 2009-01-20 19:06:39 +00:00
Gael Guennebaud
f645d1f911 * complete the support of QVector via a QtAlignedMalloc header
* add a unit test for QVector which shows the issue with QVector::fill
2009-01-20 16:50:47 +00:00
Gael Guennebaud
3134d5290b forgot to include the update of the qr test 2009-01-20 10:38:56 +00:00
Gael Guennebaud
36c478cd6e optimize A * v product for A sparse and row major 2009-01-19 22:29:28 +00:00
Gael Guennebaud
178858f1bd add a flexible sparse matrix class designed for fast matrix assembly 2009-01-19 15:20:45 +00:00
Gael Guennebaud
ccdcebcf03 Sparse module: add support for sparse selfadjoint * dense 2009-01-15 18:52:14 +00:00
Gael Guennebaud
9a4b7998cf Sparse module: add row/col methods to the iterators 2009-01-15 14:16:41 +00:00
Gael Guennebaud
87241089e1 Sparse module: bugfix in SparseMatrix::resize(), now the indices are
correctly initialized to 0.
2009-01-15 13:30:50 +00:00
Gael Guennebaud
2d53466fa9 Sparse module:
* improved performance of mat*=scalar
* bug fix in cwise*
2009-01-14 21:27:54 +00:00
Gael Guennebaud
0b606dcccd Add support for sparse * dense and dense * sparse matrix/vector products 2009-01-14 17:41:55 +00:00
Gael Guennebaud
c4c70669d1 Big rewrite in the Sparse module: SparseMatrixBase no longer inherits MatrixBase.
That means a lot of features which were available for sparse matrices
via the dense (and super slow) implemention are no longer available.
All features which make sense for sparse matrices (aka can be implemented efficiently) will be
implemented soon, but don't expect to see an API as rich as for the dense path.
Other changes:
* no block(), row(), col() anymore.
* instead use .innerVector() to get a col or row vector of a matrix.
* .segment(), start(), end() will be back soon, not sure for block()
* faster cwise product
2009-01-14 14:24:10 +00:00
Gael Guennebaud
ee87f5ee49 s/EIGEN_WORK_DIRECTORY/EIGEN_WORK_DIR in testsuite script 2009-01-14 10:43:36 +00:00
Gael Guennebaud
62d01d3cf4 hm it seems cmake does not understand CYGWIN (=> UNIX) 2009-01-12 19:39:50 +00:00
Gael Guennebaud
534dc60672 improved a bit the testsuite script 2009-01-12 18:10:41 +00:00
Benoit Jacob
4d44ca226e * make std::vector specializations also for Transform and for Quaternion
* update test_stdvector
* Quaternion() does nothing (instead of bug)
* update test_geometry
* some renaming
2009-01-12 16:06:04 +00:00
Gael Guennebaud
9d97c06d9d fix a warning in test/alignedbox 2009-01-12 15:29:51 +00:00
Gael Guennebaud
1fc17c4792 remove stupid output in test/meta 2009-01-12 15:27:25 +00:00
Benoit Jacob
336ad58213 * move cwise *= and /= to Core (like * and /)
* tidy the StdVector module
* fix warnings (especially a | instead of ||) in stdvector test
2009-01-12 13:41:40 +00:00
Gael Guennebaud
af5034b3c0 add a clean configuration summary for the unit tests (useful to analyze the dashboards) 2009-01-12 13:40:02 +00:00
Gael Guennebaud
7f881e814f another warning fix 2009-01-12 13:01:31 +00:00
Gael Guennebaud
b365f443a2 make the testsuite works on windows with nmake 2009-01-12 12:53:41 +00:00
Gael Guennebaud
484ed3bbe2 fix a warning in test/sparse.h 2009-01-12 12:52:36 +00:00
Gael Guennebaud
92959aa5f3 add the possiblity to disable Fortran (workaround cmake's bug 2009-01-12 12:51:40 +00:00
Gael Guennebaud
2db5888253 update testsuite script 2009-01-12 11:55:52 +00:00
Gael Guennebaud
9e8f437a6f extend stdvector test with more push_back... 2009-01-11 21:59:04 +00:00
Benoit Jacob
824b75f182 forgot to commit updated test 2009-01-11 21:04:23 +00:00
Benoit Jacob
0c1ef2f4c6 make the std::vector fix work also with dynamic size Eigen objects, e.g.
std::vector<VectorXd>
update unit test
2009-01-10 13:10:23 +00:00
Benoit Jacob
3efe6e4176 remove ei_new_allocator
remove corresponding part of test_dynalloc
2009-01-10 02:50:09 +00:00
Benoit Jacob
335d3bcf05 Based on code + help from Alex Stapleton:
*Add Eigen/StdVector header.
Including it #includes<vector> and "Core" and generates a partial
specialization of std::vector<T> for T=Eigen::Matrix<...>
that will work even with vectorizable fixed-size Eigen types
(working around a design issue in the c++ STL)
*Add unit-test

CCMAIL: alex.stapleton@gmail.com
2009-01-09 23:26:45 +00:00
Benoit Jacob
fd831d5a12 * implement handmade aligned malloc, fast but always wastes 16 bytes of memory.
only used as fallback for now, needs benchmarking.
  also notice that some malloc() impls do waste memory to keep track of alignment
  and other stuff (check msdn's page on malloc).
* expand test_dynalloc to cover low level aligned alloc funcs. Remove the old
  #ifdef EIGEN_VECTORIZE...
* rewrite the logic choosing an aligned alloc, some new stuff:
  * malloc() already aligned on freebsd and windows x64 (plus apple already)
  * _mm_malloc() used only if EIGEN_VECTORIZE
  * posix_memalign: correct detection according to man page (not necessarily
    linux specific), don't attempt to declare it if the platform didn't declare it
    (there had to be a reason why it didn't declare it, right?)
2009-01-09 14:56:44 +00:00
Gael Guennebaud
b315f4c359 add a ctest testsuite.cmake script to simplify the generation of nightly builds 2009-01-08 18:38:58 +00:00
Benoit Jacob
eb7dcbbfce EIGEN_MAKE_ALIGNED_OPERATOR_NEW didn't actually need to get the class
name as parameter
2009-01-08 15:37:13 +00:00
Benoit Jacob
1d52bd4cad the big memory changes. the most important changes are:
ei_aligned_malloc now really behaves like a malloc
 (untyped, doesn't call ctor)
ei_aligned_new is the typed variant calling ctor
EIGEN_MAKE_ALIGNED_OPERATOR_NEW now takes the class name as parameter
2009-01-08 15:20:21 +00:00
Gael Guennebaud
af27fb7590 Add cdash.org support:
* the dashboard is there: http://my.cdash.org/index.php?project=Eigen
* now you can run the tests from the top build dir
  and submit report like that (from the top build dir):
  ctest -D Experimental
* todo:
 - add some nighlty builds (I'll add a few on my computer)
 - add valgrind memory checks, performances tests, compilation time tests, etc.
2009-01-08 11:53:21 +00:00
Gael Guennebaud
cb71dc4bbf Add a vectorization_logic unit test for assign and sum.
Need to add dot and more tests, but it seems I've already
found some room for improvement in sum.
2009-01-07 22:20:03 +00:00