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Add matrix condition estimator module that implements the Higham/Hager algorithm from http://www.maths.manchester.ac.uk/~higham/narep/narep135.pdf used in LPACK. Add rcond() methods to FullPivLU and PartialPivLU.
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@ -33,13 +33,13 @@
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#ifdef EIGEN_EXCEPTIONS
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#undef EIGEN_EXCEPTIONS
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#endif
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// All functions callable from CUDA code must be qualified with __device__
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#define EIGEN_DEVICE_FUNC __host__ __device__
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#else
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#define EIGEN_DEVICE_FUNC
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#endif
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#if defined(__CUDA_ARCH__)
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@ -282,7 +282,7 @@ inline static const char *SimdInstructionSetsInUse(void) {
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// we use size_t frequently and we'll never remember to prepend it with std:: everytime just to
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// ensure QNX/QCC support
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using std::size_t;
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// gcc 4.6.0 wants std:: for ptrdiff_t
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// gcc 4.6.0 wants std:: for ptrdiff_t
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using std::ptrdiff_t;
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/** \defgroup Core_Module Core module
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@ -422,6 +422,7 @@ using std::ptrdiff_t;
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#include "src/Core/products/TriangularSolverVector.h"
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#include "src/Core/BandMatrix.h"
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#include "src/Core/CoreIterators.h"
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#include "src/Core/ConditionEstimator.h"
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#include "src/Core/BooleanRedux.h"
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#include "src/Core/Select.h"
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Eigen/src/Core/ConditionEstimator.h
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279
Eigen/src/Core/ConditionEstimator.h
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@ -0,0 +1,279 @@
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// This file is part of Eigen, a lightweight C++ template library
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// for linear algebra.
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//
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// Copyright (C) 2016 Rasmus Munk Larsen (rmlarsen@google.com)
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//
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// This Source Code Form is subject to the terms of the Mozilla
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// Public License v. 2.0. If a copy of the MPL was not distributed
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// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
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#ifndef EIGEN_CONDITIONESTIMATOR_H
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#define EIGEN_CONDITIONESTIMATOR_H
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namespace Eigen {
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namespace internal {
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template <typename Decomposition, bool IsComplex>
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struct EstimateInverseL1NormImpl {};
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} // namespace internal
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template <typename Decomposition>
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class ConditionEstimator {
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public:
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typedef typename Decomposition::MatrixType MatrixType;
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typedef typename internal::traits<MatrixType>::Scalar Scalar;
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typedef typename NumTraits<Scalar>::Real RealScalar;
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typedef typename internal::plain_col_type<MatrixType>::type Vector;
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/** \class ConditionEstimator
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* \ingroup Core_Module
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*
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* \brief Condition number estimator.
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*
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* Computing a decomposition of a dense matrix takes O(n^3) operations, while
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* this method estimates the condition number quickly and reliably in O(n^2)
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* operations.
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*
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* \returns an estimate of the reciprocal condition number
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* (1 / (||matrix||_1 * ||inv(matrix)||_1)) of matrix, given the matrix and
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* its decomposition. Supports the following decompositions: FullPivLU,
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* PartialPivLU.
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*
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* \sa FullPivLU, PartialPivLU.
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*/
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static RealScalar rcond(const MatrixType& matrix, const Decomposition& dec) {
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eigen_assert(matrix.rows() == dec.rows());
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eigen_assert(matrix.cols() == dec.cols());
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eigen_assert(matrix.rows() == matrix.cols());
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if (dec.rows() == 0) {
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return RealScalar(1);
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}
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RealScalar matrix_l1_norm = matrix.cwiseAbs().colwise().sum().maxCoeff();
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return rcond(MatrixL1Norm(matrix), dec);
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}
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/** \class ConditionEstimator
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* \ingroup Core_Module
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*
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* \brief Condition number estimator.
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*
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* Computing a decomposition of a dense matrix takes O(n^3) operations, while
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* this method estimates the condition number quickly and reliably in O(n^2)
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* operations.
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*
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* \returns an estimate of the reciprocal condition number
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* (1 / (||matrix||_1 * ||inv(matrix)||_1)) of matrix, given ||matrix||_1 and
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* its decomposition. Supports the following decompositions: FullPivLU,
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* PartialPivLU.
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*
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* \sa FullPivLU, PartialPivLU.
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*/
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static RealScalar rcond(RealScalar matrix_norm, const Decomposition& dec) {
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eigen_assert(dec.rows() == dec.cols());
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if (dec.rows() == 0) {
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return 1;
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}
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if (matrix_norm == 0) {
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return 0;
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}
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const RealScalar inverse_matrix_norm = EstimateInverseL1Norm(dec);
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return inverse_matrix_norm == 0 ? 0
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: (1 / inverse_matrix_norm) / matrix_norm;
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}
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/*
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* Fast algorithm for computing a lower bound estimate on the L1 norm of
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* the inverse of the matrix using at most 10 calls to the solve method on its
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* decomposition. This is an implementation of Algorithm 4.1 in
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* http://www.maths.manchester.ac.uk/~higham/narep/narep135.pdf
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* The most common usage of this algorithm is in estimating the condition
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* number ||A||_1 * ||A^{-1}||_1 of a matrix A. While ||A||_1 can be computed
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* directly in O(dims^2) operations (see MatrixL1Norm() below), while
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* there is no cheap closed-form expression for ||A^{-1}||_1.
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* Given a decompostion of A, this algorithm estimates ||A^{-1}|| in O(dims^2)
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* operations. This is done by providing operators that use the decomposition
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* to solve systems of the form A x = b or A^* z = c by back-substitution,
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* each costing O(dims^2) operations. Since at most 10 calls are performed,
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* the total cost is O(dims^2), as opposed to O(dims^3) if the inverse matrix
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* B^{-1} was formed explicitly.
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*/
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static RealScalar EstimateInverseL1Norm(const Decomposition& dec) {
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eigen_assert(dec.rows() == dec.cols());
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const int n = dec.rows();
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if (n == 0) {
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return 0;
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}
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return internal::EstimateInverseL1NormImpl<
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Decomposition, NumTraits<Scalar>::IsComplex>::compute(dec);
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}
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};
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namespace internal {
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// Partial specialization for real matrices.
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template <typename Decomposition>
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struct EstimateInverseL1NormImpl<Decomposition, 0> {
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typedef typename Decomposition::MatrixType MatrixType;
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typedef typename internal::traits<MatrixType>::Scalar Scalar;
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typedef typename internal::plain_col_type<MatrixType>::type Vector;
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// Shorthand for vector L1 norm in Eigen.
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inline static Scalar VectorL1Norm(const Vector& v) {
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return v.template lpNorm<1>();
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}
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static inline Scalar compute(const Decomposition& dec) {
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const int n = dec.rows();
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const Vector plus = Vector::Ones(n);
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Vector v = plus / n;
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v = dec.solve(v);
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Scalar lower_bound = VectorL1Norm(v);
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if (n == 1) {
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return lower_bound;
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}
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// lower_bound is a lower bound on ||inv(A)||_1 = sup_v ||inv(A) v||_1 /
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// ||v||_1 and is the objective maximized by the ("super-") gradient ascent
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// algorithm.
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// Basic idea: We know that the optimum is achieved at one of the simplices
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// v = e_i, so in each iteration we follow a super-gradient to move towards
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// the optimal one.
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Scalar old_lower_bound = lower_bound;
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const Vector minus = -Vector::Ones(n);
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Vector sign_vector = (v.cwiseAbs().array() == 0).select(plus, minus);
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Vector old_sign_vector = sign_vector;
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int v_max_abs_index = -1;
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int old_v_max_abs_index = v_max_abs_index;
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for (int k = 0; k < 4; ++k) {
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// argmax |inv(A)^T * sign_vector|
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v = dec.transpose().solve(sign_vector);
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v.cwiseAbs().maxCoeff(&v_max_abs_index);
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if (v_max_abs_index == old_v_max_abs_index) {
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// Break if the solution stagnated.
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break;
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}
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// Move to the new simplex e_j, where j = v_max_abs_index.
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v.setZero();
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v[v_max_abs_index] = 1;
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v = dec.solve(v); // v = inv(A) * e_j.
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lower_bound = VectorL1Norm(v);
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if (lower_bound <= old_lower_bound) {
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// Break if the gradient step did not increase the lower_bound.
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break;
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}
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sign_vector = (v.array() < 0).select(plus, minus);
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if (sign_vector == old_sign_vector) {
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// Break if the solution stagnated.
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break;
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}
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old_sign_vector = sign_vector;
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old_v_max_abs_index = v_max_abs_index;
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old_lower_bound = lower_bound;
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}
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// The following calculates an independent estimate of ||A||_1 by
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// multiplying
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// A by a vector with entries of slowly increasing magnitude and alternating
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// sign: v_i = (-1)^{i} (1 + (i / (dim-1))), i = 0,...,dim-1. This
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// improvement
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// to Hager's algorithm above is due to Higham. It was added to make the
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// algorithm more robust in certain corner cases where large elements in
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// the matrix might otherwise escape detection due to exact cancellation
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// (especially when op and op_adjoint correspond to a sequence of
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// backsubstitutions and permutations), which could cause Hager's algorithm
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// to vastly underestimate ||A||_1.
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Scalar alternating_sign = 1;
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for (int i = 0; i < n; ++i) {
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v[i] = alternating_sign * static_cast<Scalar>(1) +
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(static_cast<Scalar>(i) / (static_cast<Scalar>(n - 1)));
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alternating_sign = -alternating_sign;
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}
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v = dec.solve(v);
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const Scalar alternate_lower_bound =
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(2 * VectorL1Norm(v)) / (3 * static_cast<Scalar>(n));
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return numext::maxi(lower_bound, alternate_lower_bound);
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}
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};
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// Partial specialization for complex matrices.
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template <typename Decomposition>
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struct EstimateInverseL1NormImpl<Decomposition, 1> {
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typedef typename Decomposition::MatrixType MatrixType;
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typedef typename internal::traits<MatrixType>::Scalar Scalar;
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typedef typename NumTraits<Scalar>::Real RealScalar;
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typedef typename internal::plain_col_type<MatrixType>::type Vector;
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typedef typename internal::plain_col_type<MatrixType, RealScalar>::type
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RealVector;
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// Shorthand for vector L1 norm in Eigen.
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inline static RealScalar VectorL1Norm(const Vector& v) {
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return v.template lpNorm<1>();
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}
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static inline RealScalar compute(const Decomposition& dec) {
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const int n = dec.rows();
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const Vector ones = Vector::Ones(n);
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Vector v = ones / n;
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v = dec.solve(v);
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RealScalar lower_bound = VectorL1Norm(v);
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if (n == 1) {
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return lower_bound;
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}
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// lower_bound is a lower bound on ||inv(A)||_1 = sup_v ||inv(A) v||_1 /
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// ||v||_1 and is the objective maximized by the ("super-") gradient ascent
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// algorithm.
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// Basic idea: We know that the optimum is achieved at one of the simplices
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// v = e_i, so in each iteration we follow a super-gradient to move towards
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// the optimal one.
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RealScalar old_lower_bound = lower_bound;
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int v_max_abs_index = -1;
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int old_v_max_abs_index = v_max_abs_index;
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for (int k = 0; k < 4; ++k) {
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// argmax |inv(A)^* * sign_vector|
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RealVector abs_v = v.cwiseAbs();
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const Vector psi =
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(abs_v.array() == 0).select(v.cwiseQuotient(abs_v), ones);
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v = dec.adjoint().solve(psi);
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const RealVector z = v.real();
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z.cwiseAbs().maxCoeff(&v_max_abs_index);
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if (v_max_abs_index == old_v_max_abs_index) {
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// Break if the solution stagnated.
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break;
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}
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// Move to the new simplex e_j, where j = v_max_abs_index.
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v.setZero();
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v[v_max_abs_index] = 1;
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v = dec.solve(v); // v = inv(A) * e_j.
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lower_bound = VectorL1Norm(v);
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if (lower_bound <= old_lower_bound) {
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// Break if the gradient step did not increase the lower_bound.
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break;
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}
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old_v_max_abs_index = v_max_abs_index;
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old_lower_bound = lower_bound;
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}
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// The following calculates an independent estimate of ||A||_1 by
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// multiplying
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// A by a vector with entries of slowly increasing magnitude and alternating
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// sign: v_i = (-1)^{i} (1 + (i / (dim-1))), i = 0,...,dim-1. This
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// improvement
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// to Hager's algorithm above is due to Higham. It was added to make the
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// algorithm more robust in certain corner cases where large elements in
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// the matrix might otherwise escape detection due to exact cancellation
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// (especially when op and op_adjoint correspond to a sequence of
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// backsubstitutions and permutations), which could cause Hager's algorithm
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// to vastly underestimate ||A||_1.
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RealScalar alternating_sign = 1;
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for (int i = 0; i < n; ++i) {
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v[i] = alternating_sign * static_cast<RealScalar>(1) +
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(static_cast<RealScalar>(i) / (static_cast<RealScalar>(n - 1)));
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alternating_sign = -alternating_sign;
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}
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v = dec.solve(v);
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const RealScalar alternate_lower_bound =
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(2 * VectorL1Norm(v)) / (3 * static_cast<RealScalar>(n));
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return numext::maxi(lower_bound, alternate_lower_bound);
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}
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};
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} // namespace internal
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} // namespace Eigen
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#endif
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@ -231,6 +231,15 @@ template<typename _MatrixType> class FullPivLU
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return Solve<FullPivLU, Rhs>(*this, b.derived());
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}
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/** \returns an estimate of the reciprocal condition number of the matrix of which *this is
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the LU decomposition.
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*/
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inline RealScalar rcond() const
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{
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eigen_assert(m_isInitialized && "PartialPivLU is not initialized.");
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return ConditionEstimator<FullPivLU<_MatrixType> >::rcond(m_l1_norm, *this);
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}
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/** \returns the determinant of the matrix of which
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* *this is the LU decomposition. It has only linear complexity
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* (that is, O(n) where n is the dimension of the square matrix)
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@ -410,6 +419,7 @@ template<typename _MatrixType> class FullPivLU
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IntColVectorType m_rowsTranspositions;
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IntRowVectorType m_colsTranspositions;
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Index m_det_pq, m_nonzero_pivots;
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RealScalar m_l1_norm;
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RealScalar m_maxpivot, m_prescribedThreshold;
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bool m_isInitialized, m_usePrescribedThreshold;
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};
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@ -455,11 +465,12 @@ FullPivLU<MatrixType>& FullPivLU<MatrixType>::compute(const EigenBase<InputType>
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// the permutations are stored as int indices, so just to be sure:
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eigen_assert(matrix.rows()<=NumTraits<int>::highest() && matrix.cols()<=NumTraits<int>::highest());
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m_isInitialized = true;
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m_lu = matrix.derived();
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m_l1_norm = m_lu.cwiseAbs().colwise().sum().maxCoeff();
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computeInPlace();
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m_isInitialized = true;
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return *this;
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}
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@ -76,7 +76,6 @@ template<typename _MatrixType> class PartialPivLU
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typedef Transpositions<RowsAtCompileTime, MaxRowsAtCompileTime> TranspositionType;
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typedef typename MatrixType::PlainObject PlainObject;
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/**
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* \brief Default Constructor.
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*
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@ -152,6 +151,15 @@ template<typename _MatrixType> class PartialPivLU
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return Solve<PartialPivLU, Rhs>(*this, b.derived());
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}
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/** \returns an estimate of the reciprocal condition number of the matrix of which *this is
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the LU decomposition.
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*/
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inline RealScalar rcond() const
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{
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eigen_assert(m_isInitialized && "PartialPivLU is not initialized.");
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return ConditionEstimator<PartialPivLU<_MatrixType> >::rcond(m_l1_norm, *this);
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}
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/** \returns the inverse of the matrix of which *this is the LU decomposition.
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*
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* \warning The matrix being decomposed here is assumed to be invertible. If you need to check for
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@ -178,7 +186,7 @@ template<typename _MatrixType> class PartialPivLU
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*
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* \sa MatrixBase::determinant()
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*/
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typename internal::traits<MatrixType>::Scalar determinant() const;
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Scalar determinant() const;
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MatrixType reconstructedMatrix() const;
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@ -247,6 +255,7 @@ template<typename _MatrixType> class PartialPivLU
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PermutationType m_p;
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TranspositionType m_rowsTranspositions;
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Index m_det_p;
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RealScalar m_l1_norm;
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bool m_isInitialized;
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};
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@ -256,6 +265,7 @@ PartialPivLU<MatrixType>::PartialPivLU()
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m_p(),
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m_rowsTranspositions(),
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m_det_p(0),
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m_l1_norm(0),
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m_isInitialized(false)
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{
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}
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@ -266,6 +276,7 @@ PartialPivLU<MatrixType>::PartialPivLU(Index size)
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m_p(size),
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m_rowsTranspositions(size),
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m_det_p(0),
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m_l1_norm(0),
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m_isInitialized(false)
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{
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}
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@ -277,6 +288,7 @@ PartialPivLU<MatrixType>::PartialPivLU(const EigenBase<InputType>& matrix)
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m_p(matrix.rows()),
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m_rowsTranspositions(matrix.rows()),
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m_det_p(0),
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m_l1_norm(0),
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m_isInitialized(false)
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{
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compute(matrix.derived());
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@ -467,6 +479,7 @@ PartialPivLU<MatrixType>& PartialPivLU<MatrixType>::compute(const EigenBase<Inpu
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eigen_assert(matrix.rows()<NumTraits<int>::highest());
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m_lu = matrix.derived();
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m_l1_norm = m_lu.cwiseAbs().colwise().sum().maxCoeff();
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eigen_assert(matrix.rows() == matrix.cols() && "PartialPivLU is only for square (and moreover invertible) matrices");
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const Index size = matrix.rows();
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@ -484,7 +497,7 @@ PartialPivLU<MatrixType>& PartialPivLU<MatrixType>::compute(const EigenBase<Inpu
|
||||
}
|
||||
|
||||
template<typename MatrixType>
|
||||
typename internal::traits<MatrixType>::Scalar PartialPivLU<MatrixType>::determinant() const
|
||||
typename PartialPivLU<MatrixType>::Scalar PartialPivLU<MatrixType>::determinant() const
|
||||
{
|
||||
eigen_assert(m_isInitialized && "PartialPivLU is not initialized.");
|
||||
return Scalar(m_det_p) * m_lu.diagonal().prod();
|
||||
|
22
test/lu.cpp
22
test/lu.cpp
@ -11,6 +11,11 @@
|
||||
#include <Eigen/LU>
|
||||
using namespace std;
|
||||
|
||||
template<typename MatrixType>
|
||||
typename MatrixType::RealScalar matrix_l1_norm(const MatrixType& m) {
|
||||
return m.cwiseAbs().colwise().sum().maxCoeff();
|
||||
}
|
||||
|
||||
template<typename MatrixType> void lu_non_invertible()
|
||||
{
|
||||
typedef typename MatrixType::Index Index;
|
||||
@ -143,7 +148,13 @@ template<typename MatrixType> void lu_invertible()
|
||||
m3 = MatrixType::Random(size,size);
|
||||
m2 = lu.solve(m3);
|
||||
VERIFY_IS_APPROX(m3, m1*m2);
|
||||
VERIFY_IS_APPROX(m2, lu.inverse()*m3);
|
||||
MatrixType m1_inverse = lu.inverse();
|
||||
VERIFY_IS_APPROX(m2, m1_inverse*m3);
|
||||
|
||||
// Test condition number estimation.
|
||||
RealScalar rcond = RealScalar(1) / matrix_l1_norm(m1) / matrix_l1_norm(m1_inverse);
|
||||
// Verify that the estimate is within a factor of 10 of the truth.
|
||||
VERIFY(lu.rcond() > rcond / 10 && lu.rcond() < rcond * 10);
|
||||
|
||||
// test solve with transposed
|
||||
lu.template _solve_impl_transposed<false>(m3, m2);
|
||||
@ -170,6 +181,7 @@ template<typename MatrixType> void lu_partial_piv()
|
||||
PartialPivLU.h
|
||||
*/
|
||||
typedef typename MatrixType::Index Index;
|
||||
typedef typename NumTraits<typename MatrixType::Scalar>::Real RealScalar;
|
||||
Index size = internal::random<Index>(1,4);
|
||||
|
||||
MatrixType m1(size, size), m2(size, size), m3(size, size);
|
||||
@ -181,7 +193,13 @@ template<typename MatrixType> void lu_partial_piv()
|
||||
m3 = MatrixType::Random(size,size);
|
||||
m2 = plu.solve(m3);
|
||||
VERIFY_IS_APPROX(m3, m1*m2);
|
||||
VERIFY_IS_APPROX(m2, plu.inverse()*m3);
|
||||
MatrixType m1_inverse = plu.inverse();
|
||||
VERIFY_IS_APPROX(m2, m1_inverse*m3);
|
||||
|
||||
// Test condition number estimation.
|
||||
RealScalar rcond = RealScalar(1) / matrix_l1_norm(m1) / matrix_l1_norm(m1_inverse);
|
||||
// Verify that the estimate is within a factor of 10 of the truth.
|
||||
VERIFY(plu.rcond() > rcond / 10 && plu.rcond() < rcond * 10);
|
||||
|
||||
// test solve with transposed
|
||||
plu.template _solve_impl_transposed<false>(m3, m2);
|
||||
|
Loading…
Reference in New Issue
Block a user